Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0846760 | XP_003614009.2 | 51.493 | 134 | 26 | 1 | 303 | 436 | 218 | 312 | 8.12e-26 | 118 |
| Msa0846760 | XP_003614009.2 | 90.291 | 309 | 29 | 1 | 1 | 308 | 1 | 309 | 2.84e-172 | 495 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0846760 | G7JXW7 | 51.493 | 134 | 26 | 1 | 303 | 436 | 218 | 312 | 3.88e-26 | 118 |
| Msa0846760 | G7JXW7 | 90.291 | 309 | 29 | 1 | 1 | 308 | 1 | 309 | 1.35e-172 | 495 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0096490 | Msa0846760 | 0.875270 | 3.518192e-68 | -8.615850e-47 |
| Msa0846760 | Msa1435180 | 0.885993 | 5.031731e-72 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0846760 | MtrunA17_Chr5g0418651 | 90.291 | 309 | 29 | 1 | 1 | 308 | 1 | 309 | 2.61e-176 | 495 |
| Msa0846760 | MtrunA17_Chr5g0418651 | 51.493 | 134 | 26 | 1 | 303 | 436 | 218 | 312 | 7.46e-30 | 118 |
| Msa0846760 | MtrunA17_Chr4g0042991 | 42.119 | 387 | 136 | 10 | 1 | 305 | 1 | 381 | 1.39e-52 | 181 |
| Msa0846760 | MtrunA17_Chr5g0418641 | 84.000 | 75 | 11 | 1 | 8 | 81 | 1 | 75 | 1.75e-31 | 115 |
| Msa0846760 | MtrunA17_Chr5g0418631 | 62.245 | 98 | 29 | 3 | 331 | 426 | 1 | 92 | 3.01e-23 | 94.0 |
| Msa0846760 | MtrunA17_Chr5g0418631 | 56.757 | 74 | 24 | 2 | 246 | 318 | 36 | 102 | 1.70e-13 | 66.6 |
| Msa0846760 | MtrunA17_Chr3g0086051 | 34.615 | 104 | 68 | 0 | 202 | 305 | 151 | 254 | 2.02e-15 | 75.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0846760 | AT1G13920.1 | 47.664 | 107 | 55 | 1 | 200 | 305 | 233 | 339 | 5.03e-22 | 97.1 |
| Msa0846760 | AT1G13920.1 | 34.615 | 130 | 45 | 2 | 308 | 436 | 255 | 345 | 3.04e-11 | 65.1 |
| Msa0846760 | AT1G13920.4 | 47.664 | 107 | 55 | 1 | 200 | 305 | 266 | 372 | 5.84e-22 | 97.4 |
| Msa0846760 | AT1G13920.4 | 34.615 | 130 | 45 | 2 | 308 | 436 | 288 | 378 | 3.55e-11 | 65.1 |
| Msa0846760 | AT5G61280.2 | 33.929 | 112 | 74 | 0 | 197 | 308 | 123 | 234 | 1.16e-15 | 76.6 |
| Msa0846760 | AT5G61280.1 | 33.929 | 112 | 74 | 0 | 197 | 308 | 146 | 257 | 2.14e-15 | 76.3 |
| Msa0846760 | AT1G69325.1 | 44.444 | 99 | 55 | 0 | 207 | 305 | 18 | 116 | 2.87e-13 | 66.6 |
Find 102 sgRNAs with CRISPR-Local
Find 457 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAAGAAAGGTTGAAATCTT+TGG | 0.219285 | 5_4:+27501397 | Msa0846760:CDS |
| CCAGTAGAATGGAGAATTTA+TGG | 0.262483 | 5_4:+27494407 | Msa0846760:exon |
| TAATTGGTGGTGGCGGTGGC+GGG | 0.267031 | 5_4:-27495986 | None:intergenic |
| TGCATTATCAATTAATTTGC+AGG | 0.274227 | 5_4:+27495570 | Msa0846760:CDS |
| AAATATTACCTTTGAAAGAT+TGG | 0.293146 | 5_4:-27495063 | None:intergenic |
| ATAATTGGTGGTGGCGGTGG+CGG | 0.306446 | 5_4:-27495987 | None:intergenic |
| AATTGGTGGTGGCGGTGGCG+GGG | 0.311891 | 5_4:-27495985 | None:intergenic |
| ATCTCTGAAGTCTTCATAAT+TGG | 0.323102 | 5_4:-27496002 | None:intergenic |
| TGTGGCAGTTTGCCTGTTGT+TGG | 0.346776 | 5_4:-27501656 | None:intergenic |
| ATTGGTGGTGGCGGTGGCGG+GGG | 0.361406 | 5_4:-27495984 | None:intergenic |
| TGAAAATGTTGATAGATTCC+TGG | 0.363230 | 5_4:+27496257 | Msa0846760:CDS |
| CTTGTAGCTCTTCAATTCTT+CGG | 0.364293 | 5_4:-27501610 | None:intergenic |
| AGCTTGGCCGATGAGGCCTC+CGG | 0.366801 | 5_4:-27495619 | None:intergenic |
| CCTGTTGTAGTCTGTCTTAG+AGG | 0.376234 | 5_4:-27496032 | None:intergenic |
| TTCCTTCACTAGCTTGCGTT+TGG | 0.377600 | 5_4:-27501106 | None:intergenic |
| TTTGTTAGGGTACAACTTAC+CGG | 0.378969 | 5_4:+27494977 | Msa0846760:intron |
| ACGGAGAAGGTTAAAAGCTT+TGG | 0.381346 | 5_4:+27496535 | Msa0846760:CDS |
| CCATAAATTCTCCATTCTAC+TGG | 0.390458 | 5_4:-27494407 | None:intergenic |
| AATATTACCTTTGAAAGATT+GGG | 0.397926 | 5_4:-27495062 | None:intergenic |
| TTGCTTCATTAGCTTGCGTT+TGG | 0.400523 | 5_4:-27496302 | None:intergenic |
| TAGTGCATCCAAGCGATTAT+CGG | 0.415944 | 5_4:+27495687 | Msa0846760:CDS |
| ACAGCGAAGGTTGAAATCTA+AGG | 0.420778 | 5_4:+27501517 | Msa0846760:CDS |
| TTCTAAATTGCAGAGTGAAA+TGG | 0.423619 | 5_4:+27496511 | Msa0846760:intron |
| AGGAAAGCCAAAAGAAAATT+CGG | 0.429597 | 5_4:+27501483 | Msa0846760:CDS |
| GGAAAGAGTTGATAGATTCA+TGG | 0.429602 | 5_4:+27501061 | Msa0846760:CDS |
| AAACAGCTTTCAGGTAAAAC+AGG | 0.436606 | 5_4:+27495496 | Msa0846760:CDS |
| GTAGTCTGTCTTAGAGGATC+AGG | 0.438277 | 5_4:-27496026 | None:intergenic |
| AGAAGAAGAAGGGCCAGAAT+TGG | 0.439656 | 5_4:+27495467 | Msa0846760:CDS |
| CCTCTAAGACAGACTACAAC+AGG | 0.445039 | 5_4:+27496032 | Msa0846760:CDS |
| AATGAAGAGCTACAAGCAAA+AGG | 0.447061 | 5_4:+27496635 | Msa0846760:CDS |
| TTCATAATTGGTGGTGGCGG+TGG | 0.460521 | 5_4:-27495990 | None:intergenic |
| GGGAGACAGATGCAGATGAA+TGG | 0.461311 | 5_4:+27496066 | Msa0846760:CDS |
| TTTCTATGTGGTCGTAATCA+TGG | 0.462345 | 5_4:-27495519 | None:intergenic |
| ATCTTTACCCGATAATCGCT+TGG | 0.462904 | 5_4:-27495695 | None:intergenic |
| CATTGTTGGCGTAGGAGTAA+TGG | 0.466358 | 5_4:-27495898 | None:intergenic |
| TGAGCAGAAGAGTGAGAGCC+CGG | 0.469018 | 5_4:+27495600 | Msa0846760:CDS |
| GCTTGGCCGATGAGGCCTCC+GGG | 0.477470 | 5_4:-27495618 | None:intergenic |
| CTACAACAGGATCAAACAAT+GGG | 0.477695 | 5_4:+27496045 | Msa0846760:CDS |
| GAGGAGAACAAAGCTGATCT+TGG | 0.481626 | 5_4:+27495004 | Msa0846760:CDS |
| TGCAGATGCAGCGAGATTCA+AGG | 0.481656 | 5_4:+27501577 | Msa0846760:CDS |
| ACAAAACCCTCCCAGTAGAA+TGG | 0.487032 | 5_4:+27494396 | Msa0846760:exon |
| GCAAGTACAATTCCAACAAC+AGG | 0.488219 | 5_4:+27501644 | Msa0846760:CDS |
| AGTGCATCCAAGCGATTATC+GGG | 0.489926 | 5_4:+27495688 | Msa0846760:CDS |
| ATTCCTGGGAAGACAAGAAA+AGG | 0.490794 | 5_4:+27496272 | Msa0846760:CDS |
| ATTCATGGGAAGACAAGAAA+AGG | 0.490794 | 5_4:+27501076 | Msa0846760:CDS |
| TGATTACGACCACATAGAAA+TGG | 0.492344 | 5_4:+27495522 | Msa0846760:CDS |
| GAAAATGTTGATAGATTCCT+GGG | 0.493456 | 5_4:+27496258 | Msa0846760:CDS |
| GAAAGAGTTGATAGATTCAT+GGG | 0.495863 | 5_4:+27501062 | Msa0846760:CDS |
| TGCAGAGTGAACTTGAAGAA+AGG | 0.496563 | 5_4:+27501384 | Msa0846760:intron |
| GGAGACAGATGCAGATGAAT+GGG | 0.502514 | 5_4:+27496067 | Msa0846760:CDS |
| TGAGAGCCCGGAGGCCTCAT+CGG | 0.503947 | 5_4:+27495612 | Msa0846760:CDS |
| ATGAAGAGCTACAAGCAAAA+GGG | 0.506299 | 5_4:+27496636 | Msa0846760:CDS |
| AGCTTTGTTCTCCTCCGTAC+CGG | 0.507897 | 5_4:-27494996 | None:intergenic |
| AGTTGTAGAAGAAAAGAAAC+CGG | 0.517846 | 5_4:+27495869 | Msa0846760:CDS |
| TCTGAAGTCTTCATAATTGG+TGG | 0.519146 | 5_4:-27495999 | None:intergenic |
| AGAATTTATGGAGTCAAATG+AGG | 0.520763 | 5_4:+27494419 | Msa0846760:CDS |
| ACGCAAGCTAGTGAAGGAAC+AGG | 0.521158 | 5_4:+27501110 | Msa0846760:CDS |
| AATTCTCCATTCTACTGGGA+GGG | 0.531614 | 5_4:-27494402 | None:intergenic |
| CATAAATTCTCCATTCTACT+GGG | 0.545165 | 5_4:-27494406 | None:intergenic |
| CGGAGCAAATGCCAAGGCTG+AGG | 0.545337 | 5_4:+27501463 | Msa0846760:CDS |
| AGAAGAAAAGAAACCGGAAA+AGG | 0.548483 | 5_4:+27495875 | Msa0846760:CDS |
| GTCTTCATAATTGGTGGTGG+CGG | 0.550990 | 5_4:-27495993 | None:intergenic |
| ATTTAGATCTAAAGATGACC+AGG | 0.556568 | 5_4:+27495824 | Msa0846760:CDS |
| GCTTGGATGCACTACTGAGA+AGG | 0.556868 | 5_4:-27495678 | None:intergenic |
| GAAGTCTTCATAATTGGTGG+TGG | 0.559569 | 5_4:-27495996 | None:intergenic |
| TGCAGACGGCGCAAGAGCAA+AGG | 0.562482 | 5_4:+27496595 | Msa0846760:CDS |
| CAGAAAACCCAATCTTTCAA+AGG | 0.570940 | 5_4:+27495055 | Msa0846760:CDS |
| ATCTTGGTGCCACAAGAGAT+CGG | 0.579109 | 5_4:+27495020 | Msa0846760:CDS |
| CGGCGCAAGAGCAAAGGTCG+AGG | 0.580597 | 5_4:+27496601 | Msa0846760:CDS |
| ACATTGTCAGGTATGAGAAG+TGG | 0.585278 | 5_4:+27501040 | Msa0846760:intron |
| ATGTTCAACAGAGAAGAAGA+AGG | 0.587013 | 5_4:+27495456 | Msa0846760:intron |
| ATGTTGACGCCTTGTCACCC+TGG | 0.599021 | 5_4:-27495842 | None:intergenic |
| AGCCAAACGCAAGCTAGTGA+AGG | 0.599861 | 5_4:+27501104 | Msa0846760:CDS |
| CTTGGATGCACTACTGAGAA+GGG | 0.599961 | 5_4:-27495677 | None:intergenic |
| GGAGTGAACTTGAACAGCGA+AGG | 0.600312 | 5_4:+27501504 | Msa0846760:CDS |
| AGAGTGAAATGGAACGGAGA+AGG | 0.604934 | 5_4:+27496522 | Msa0846760:intron |
| TAGGGTACAACTTACCGGTA+CGG | 0.607951 | 5_4:+27494982 | Msa0846760:intron |
| AAGCTCAAAAGCAAGGTGGA+CGG | 0.608433 | 5_4:+27495637 | Msa0846760:CDS |
| AATTGCAGAGTGAAATGGAA+CGG | 0.610000 | 5_4:+27496516 | Msa0846760:intron |
| TAAAGATGACCAGGGTGACA+AGG | 0.610189 | 5_4:+27495833 | Msa0846760:CDS |
| ATCGGCCAAGCTCAAAAGCA+AGG | 0.610955 | 5_4:+27495630 | Msa0846760:CDS |
| ACGCAAGCTAATGAAGCAAG+AGG | 0.611713 | 5_4:+27496306 | Msa0846760:CDS |
| ACTACAACAGGATCAAACAA+TGG | 0.614774 | 5_4:+27496044 | Msa0846760:CDS |
| AGGAGGAGCATTTGGCGCTG+TGG | 0.618095 | 5_4:-27495958 | None:intergenic |
| GAACAGCATGCAAACTGCCA+CGG | 0.622376 | 5_4:+27496675 | Msa0846760:CDS |
| AAATTCTCCATTCTACTGGG+AGG | 0.626794 | 5_4:-27494403 | None:intergenic |
| TGTTCAACAGAGAAGAAGAA+GGG | 0.638777 | 5_4:+27495457 | Msa0846760:intron |
| TATGTAAAACTAGTTGCAGA+CGG | 0.645184 | 5_4:+27501443 | Msa0846760:CDS |
| AGAGCTACAAGCAAGAGAGA+AGG | 0.645591 | 5_4:+27501622 | Msa0846760:CDS |
| TATGTAAATCTAGTTGCAGA+CGG | 0.648425 | 5_4:+27496581 | Msa0846760:CDS |
| CAGCATGCACCATTTCTATG+TGG | 0.651802 | 5_4:-27495531 | None:intergenic |
| CAAATTAATTGATAATGCAG+CGG | 0.651965 | 5_4:-27495566 | None:intergenic |
| CAGAAGCAGAAATACTTCTG+TGG | 0.654497 | 5_4:-27501674 | None:intergenic |
| TGCAGACGGAGCAAATGCCA+AGG | 0.660983 | 5_4:+27501457 | Msa0846760:CDS |
| AGAGCTACAAGCAAAAGGGA+AGG | 0.666489 | 5_4:+27496640 | Msa0846760:CDS |
| GCAGAAGAGTGAGAGCCCGG+AGG | 0.674160 | 5_4:+27495603 | Msa0846760:CDS |
| TTTAGATCTAAAGATGACCA+GGG | 0.678368 | 5_4:+27495825 | Msa0846760:CDS |
| AACTCGACAAGATCAAACAA+AGG | 0.689212 | 5_4:+27496099 | Msa0846760:CDS |
| GGTACAACTTACCGGTACGG+AGG | 0.692894 | 5_4:+27494985 | Msa0846760:CDS |
| CAGAAGCAGAAATACATCCG+TGG | 0.708198 | 5_4:-27496692 | None:intergenic |
| GGCCAAGCTCAAAAGCAAGG+TGG | 0.710319 | 5_4:+27495633 | Msa0846760:CDS |
| TACAACAGGATCAAACAATG+GGG | 0.783663 | 5_4:+27496046 | Msa0846760:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTATTCAAAAAAAATAGTT+AGG | + | chr5_4:27494866-27494885 | Msa0846760:intron | 10.0% |
| !! | TTATTCAAAAAAAATAGTTA+GGG | + | chr5_4:27494867-27494886 | Msa0846760:intron | 10.0% |
| !!! | TAATAATTACTTTTTTTTGA+AGG | + | chr5_4:27500256-27500275 | Msa0846760:intron | 10.0% |
| !!! | AATTAATAATTACTTTTAGA+TGG | + | chr5_4:27500280-27500299 | Msa0846760:intron | 10.0% |
| !!! | TTTCTTTTCCTTTTATTTTT+TGG | - | chr5_4:27495352-27495371 | None:intergenic | 15.0% |
| !!! | AAGTTTATTTTGTTACAAAT+TGG | - | chr5_4:27497166-27497185 | None:intergenic | 15.0% |
| !!! | TCACTTATATATAGATTTTT+AGG | - | chr5_4:27497242-27497261 | None:intergenic | 15.0% |
| !!! | TTCTTATACATTTTATTGTA+TGG | + | chr5_4:27498210-27498229 | Msa0846760:intron | 15.0% |
| !!! | TTGAAAAAGCTAATTTTTTA+AGG | + | chr5_4:27498314-27498333 | Msa0846760:intron | 15.0% |
| !!! | TCTAAAAGAATAGTTTTTTT+AGG | + | chr5_4:27499053-27499072 | Msa0846760:intron | 15.0% |
| !!! | CTAAAAGAATAGTTTTTTTA+GGG | + | chr5_4:27499054-27499073 | Msa0846760:intron | 15.0% |
| !!! | TGAAATTTTAGAGAAAAAAT+TGG | + | chr5_4:27500431-27500450 | Msa0846760:intron | 15.0% |
| !!! | GAAATTTTAGAGAAAAAATT+GGG | + | chr5_4:27500432-27500451 | Msa0846760:intron | 15.0% |
| !! | CTTTAAACATGTTATAATTA+TGG | + | chr5_4:27500583-27500602 | Msa0846760:intron | 15.0% |
| !! | TAAAAAAAAAAAAACTAGAG+AGG | + | chr5_4:27501292-27501311 | Msa0846760:intron | 15.0% |
| !! | TACAATATTTACCATGTTAA+TGG | + | chr5_4:27494531-27494550 | Msa0846760:intron | 20.0% |
| !! | AAAAAAGTGATTATGATGTT+TGG | - | chr5_4:27494732-27494751 | None:intergenic | 20.0% |
| !!! | ATTACATGAACAATTTTGTT+AGG | + | chr5_4:27494963-27494982 | Msa0846760:intron | 20.0% |
| !!! | TTACATGAACAATTTTGTTA+GGG | + | chr5_4:27494964-27494983 | Msa0846760:intron | 20.0% |
| !!! | AATATTACCTTTGAAAGATT+GGG | - | chr5_4:27495065-27495084 | None:intergenic | 20.0% |
| !!! | AAATATTACCTTTGAAAGAT+TGG | - | chr5_4:27495066-27495085 | None:intergenic | 20.0% |
| !! | ATAATAAAGAGGAAAAGAAA+AGG | + | chr5_4:27495248-27495267 | Msa0846760:intron | 20.0% |
| !! | ATTATGATTCATAAATGAAG+TGG | - | chr5_4:27495730-27495749 | None:intergenic | 20.0% |
| !!! | GTTTTTCTACTTAAGAATAA+TGG | - | chr5_4:27495755-27495774 | None:intergenic | 20.0% |
| !! | TATTAATGAAAAACATTGTC+AGG | + | chr5_4:27496224-27496243 | Msa0846760:intron | 20.0% |
| !! | AATGATAAAAGAAACTAGAA+AGG | + | chr5_4:27496439-27496458 | Msa0846760:intron | 20.0% |
| !!! | TCACTAGCTTTATAATATTT+TGG | - | chr5_4:27496977-27496996 | None:intergenic | 20.0% |
| !! | AAAGATTATTAGCTAATGAA+AGG | + | chr5_4:27497395-27497414 | Msa0846760:intron | 20.0% |
| !! | ATATTACAATGCTTACAATA+GGG | - | chr5_4:27497444-27497463 | None:intergenic | 20.0% |
| !! | AATATTACAATGCTTACAAT+AGG | - | chr5_4:27497445-27497464 | None:intergenic | 20.0% |
| !! | AATAAACTTTAAACTTTCCA+AGG | + | chr5_4:27498056-27498075 | Msa0846760:intron | 20.0% |
| !!! | TTTACATGAACAATTTTGTT+AGG | + | chr5_4:27498534-27498553 | Msa0846760:intron | 20.0% |
| !!! | TTACATGAACAATTTTGTTA+GGG | + | chr5_4:27494964-27494983 | Msa0846760:intron | 20.0% |
| !!! | AAACTATTCTTTTAGAATGA+CGG | - | chr5_4:27499049-27499068 | None:intergenic | 20.0% |
| !! | ATAAATGACAAGAAAGTAAA+GGG | - | chr5_4:27499508-27499527 | None:intergenic | 20.0% |
| !! | AATAAATGACAAGAAAGTAA+AGG | - | chr5_4:27499509-27499528 | None:intergenic | 20.0% |
| !!! | TGTAAAAAAAATTTGAGATG+TGG | - | chr5_4:27499872-27499891 | None:intergenic | 20.0% |
| !! | TATTAATGAAAAACATTGTC+AGG | + | chr5_4:27496224-27496243 | Msa0846760:intron | 20.0% |
| ! | AAATATTGTAACAACAAGCT+AGG | - | chr5_4:27494521-27494540 | None:intergenic | 25.0% |
| ! | AATATTTACCATGTTAATGG+TGG | + | chr5_4:27494534-27494553 | Msa0846760:intron | 25.0% |
| !!! | TTGAAAAAGCTAGTTTTTCA+AGG | + | chr5_4:27494565-27494584 | Msa0846760:intron | 25.0% |
| !! | AGAAAACATGAGATTTTCAA+TGG | - | chr5_4:27494667-27494686 | None:intergenic | 25.0% |
| !!! | TTCTCTATAGTATTGGTTAT+TGG | - | chr5_4:27494699-27494718 | None:intergenic | 25.0% |
| !!! | CTCACACCATTTTATTTTAA+GGG | + | chr5_4:27494765-27494784 | Msa0846760:intron | 25.0% |
| ! | TCAAGACCCTTAAAATAAAA+TGG | - | chr5_4:27494774-27494793 | None:intergenic | 25.0% |
| ! | TTGATATAGCTATCATTGAT+CGG | - | chr5_4:27494837-27494856 | None:intergenic | 25.0% |
| !! | AAGATGCTCATAATTTTCAT+TGG | + | chr5_4:27494931-27494950 | Msa0846760:intron | 25.0% |
| ! | TAAGATGTATCTAATGTGTT+TGG | - | chr5_4:27495132-27495151 | None:intergenic | 25.0% |
| ! | AACCATTAAGCATAATAAAG+AGG | + | chr5_4:27495237-27495256 | Msa0846760:intron | 25.0% |
| ! | TTCCTCTTTATTATGCTTAA+TGG | - | chr5_4:27495242-27495261 | None:intergenic | 25.0% |
| ! | GATAATGCATAATATATGCA+GGG | + | chr5_4:27495301-27495320 | Msa0846760:intron | 25.0% |
| !!! | CTTTTCCTTTTATTTTTTGG+TGG | - | chr5_4:27495349-27495368 | None:intergenic | 25.0% |
| !!! | CAAATTAATTGATAATGCAG+CGG | - | chr5_4:27495569-27495588 | None:intergenic | 25.0% |
| !!! | TGCATTATCAATTAATTTGC+AGG | + | chr5_4:27495570-27495589 | Msa0846760:CDS | 25.0% |
| ! | TATAGCATCATGTATTGTTT+GGG | - | chr5_4:27496811-27496830 | None:intergenic | 25.0% |
| ! | TTATAGCATCATGTATTGTT+TGG | - | chr5_4:27496812-27496831 | None:intergenic | 25.0% |
| !!! | CTCAACTAAAAAGTATTATG+TGG | - | chr5_4:27497097-27497116 | None:intergenic | 25.0% |
| ! | TAGTTGAGTTTGATGAAAAT+AGG | + | chr5_4:27497109-27497128 | Msa0846760:intron | 25.0% |
| ! | GTTATAAACATCTGTCTTAA+AGG | + | chr5_4:27497198-27497217 | Msa0846760:intron | 25.0% |
| ! | AAGGAAAAATAAGATGCATT+TGG | + | chr5_4:27497414-27497433 | Msa0846760:intron | 25.0% |
| ! | TGCTTATACAACATAGATTT+GGG | + | chr5_4:27497681-27497700 | Msa0846760:intron | 25.0% |
| ! | ACTATGAGTTACATGAATAA+CGG | - | chr5_4:27497779-27497798 | None:intergenic | 25.0% |
| !!! | AAAAAGCTGCTTTACATTTT+GGG | - | chr5_4:27498028-27498047 | None:intergenic | 25.0% |
| !!! | TAAAAAGCTGCTTTACATTT+TGG | - | chr5_4:27498029-27498048 | None:intergenic | 25.0% |
| ! | ATTTAATATAGAAGAAGCCT+TGG | - | chr5_4:27498076-27498095 | None:intergenic | 25.0% |
| ! | AGTATTTACCTTGTTAATAG+TGG | + | chr5_4:27498283-27498302 | Msa0846760:intron | 25.0% |
| !! | AAGATGCTCATAATTTTCAT+CGG | + | chr5_4:27494931-27494950 | Msa0846760:intron | 25.0% |
| ! | TATATTCATGATTGTGATGT+TGG | + | chr5_4:27498618-27498637 | Msa0846760:intron | 25.0% |
| !! | TCAAGGAGTAACAATATTTT+CGG | + | chr5_4:27498836-27498855 | Msa0846760:intron | 25.0% |
| !!! | ACAATATTTTCGGGAATATT+TGG | + | chr5_4:27498846-27498865 | Msa0846760:intron | 25.0% |
| ! | TAAAATGTAGGAACATCTTT+AGG | - | chr5_4:27498887-27498906 | None:intergenic | 25.0% |
| !! | TAAAGATGTTCCTACATTTT+AGG | + | chr5_4:27498886-27498905 | Msa0846760:intron | 25.0% |
| ! | ACAAGAATCAGTAACAAATA+TGG | - | chr5_4:27498917-27498936 | None:intergenic | 25.0% |
| ! | CATATATACTGAAGCAATAT+GGG | - | chr5_4:27498995-27499014 | None:intergenic | 25.0% |
| !!! | TGTTTTAATTTGAAAGTCAC+AGG | + | chr5_4:27499272-27499291 | Msa0846760:intron | 25.0% |
| !!! | GTTTTAATTTGAAAGTCACA+GGG | + | chr5_4:27499273-27499292 | Msa0846760:intron | 25.0% |
| !!! | TTTTAATTTGAAAGTCACAG+GGG | + | chr5_4:27499274-27499293 | Msa0846760:intron | 25.0% |
| !!! | TTTTGTTTTTTGAGCGAATA+AGG | + | chr5_4:27500144-27500163 | Msa0846760:intron | 25.0% |
| ! | GATTATTATTGAATGAAGAG+TGG | - | chr5_4:27500208-27500227 | None:intergenic | 25.0% |
| !! | TCATCTCTTATTTAAGTTCA+AGG | + | chr5_4:27500357-27500376 | Msa0846760:intron | 25.0% |
| !! | CACTCTTAATTTGAGTATTT+AGG | + | chr5_4:27500394-27500413 | Msa0846760:intron | 25.0% |
| !!! | AGTATTTATTCTAGTTTCGT+TGG | - | chr5_4:27500972-27500991 | None:intergenic | 25.0% |
| ! | AGAATAAATACTATCATCTC+TGG | + | chr5_4:27500980-27500999 | Msa0846760:intron | 25.0% |
| ! | TATAATCTGAATGTAATGCT+CGG | - | chr5_4:27501008-27501027 | None:intergenic | 25.0% |
| !!! | ACATTATCTGATTTTAGCTA+AGG | - | chr5_4:27501213-27501232 | None:intergenic | 25.0% |
| ! | CTAAAATCAGATAATGTTCT+AGG | + | chr5_4:27501216-27501235 | Msa0846760:intron | 25.0% |
| ! | TAGTAAGACACAAATTTAAC+AGG | - | chr5_4:27501243-27501262 | None:intergenic | 25.0% |
| CATAAATTCTCCATTCTACT+GGG | - | chr5_4:27494409-27494428 | None:intergenic | 30.0% | |
| AGAATTTATGGAGTCAAATG+AGG | + | chr5_4:27494419-27494438 | Msa0846760:CDS | 30.0% | |
| TTTCTTTCCACACATCTTAT+TGG | + | chr5_4:27494457-27494476 | Msa0846760:intron | 30.0% | |
| ATGGAGATTCTCTATAGTAT+TGG | - | chr5_4:27494706-27494725 | None:intergenic | 30.0% | |
| TGATTATGATGTTTGGATGA+TGG | - | chr5_4:27494725-27494744 | None:intergenic | 30.0% | |
| CCTTAAAATAAAATGGTGTG+AGG | - | chr5_4:27494767-27494786 | None:intergenic | 30.0% | |
| !!! | CCTCACACCATTTTATTTTA+AGG | + | chr5_4:27494764-27494783 | Msa0846760:intron | 30.0% |
| ! | TTTAAGGGTCTTGATTTTAC+AGG | + | chr5_4:27494780-27494799 | Msa0846760:intron | 30.0% |
| TGATATAGCTATCATTGATC+GGG | - | chr5_4:27494836-27494855 | None:intergenic | 30.0% | |
| ! | AAAGATTGGGTTTTCTGTAT+AGG | - | chr5_4:27495052-27495071 | None:intergenic | 30.0% |
| AATGAGAGAAATGAAGGTAA+GGG | - | chr5_4:27495102-27495121 | None:intergenic | 30.0% | |
| ACTAACAATGAGAGAAATGA+AGG | - | chr5_4:27495108-27495127 | None:intergenic | 30.0% | |
| TATTTCAATCACTCTCCAAT+GGG | - | chr5_4:27495163-27495182 | None:intergenic | 30.0% | |
| TTATTTCAATCACTCTCCAA+TGG | - | chr5_4:27495164-27495183 | None:intergenic | 30.0% | |
| GGATAATGCATAATATATGC+AGG | + | chr5_4:27495300-27495319 | Msa0846760:intron | 30.0% | |
| CATAATATATGCAGGGTTTA+TGG | + | chr5_4:27495308-27495327 | Msa0846760:intron | 30.0% | |
| !!! | TTTATTTTTTGGTGGTGTCT+GGG | - | chr5_4:27495341-27495360 | None:intergenic | 30.0% |
| !!! | TTTTATTTTTTGGTGGTGTC+TGG | - | chr5_4:27495342-27495361 | None:intergenic | 30.0% |
| AGACACCACCAAAAAATAAA+AGG | + | chr5_4:27495341-27495360 | Msa0846760:intron | 30.0% | |
| ATTTAGATCTAAAGATGACC+AGG | + | chr5_4:27495824-27495843 | Msa0846760:CDS | 30.0% | |
| TTTAGATCTAAAGATGACCA+GGG | + | chr5_4:27495825-27495844 | Msa0846760:CDS | 30.0% | |
| ! | TTTCTTTTCTTCTACAACTG+AGG | - | chr5_4:27495868-27495887 | None:intergenic | 30.0% |
| AGTTGTAGAAGAAAAGAAAC+CGG | + | chr5_4:27495869-27495888 | Msa0846760:CDS | 30.0% | |
| !! | ATCTCTGAAGTCTTCATAAT+TGG | - | chr5_4:27496005-27496024 | None:intergenic | 30.0% |
| ! | TGAAAATGTTGATAGATTCC+TGG | + | chr5_4:27496257-27496276 | Msa0846760:CDS | 30.0% |
| ! | GAAAATGTTGATAGATTCCT+GGG | + | chr5_4:27496258-27496277 | Msa0846760:CDS | 30.0% |
| ATAAAAGAAACTAGAAAGGC+CGG | + | chr5_4:27496443-27496462 | Msa0846760:intron | 30.0% | |
| TTCTAAATTGCAGAGTGAAA+TGG | + | chr5_4:27496511-27496530 | Msa0846760:intron | 30.0% | |
| TATGTAAATCTAGTTGCAGA+CGG | + | chr5_4:27496581-27496600 | Msa0846760:CDS | 30.0% | |
| !!! | CTTGTAGCTCTTCATTTTTT+CGG | - | chr5_4:27496631-27496650 | None:intergenic | 30.0% |
| !! | AAGTTTAGCTTTCCTTGTTT+AGG | + | chr5_4:27496891-27496910 | Msa0846760:intron | 30.0% |
| !! | AGTTTAGCTTTCCTTGTTTA+GGG | + | chr5_4:27496892-27496911 | Msa0846760:intron | 30.0% |
| CAAAACTAAATCCCTAAACA+AGG | - | chr5_4:27496906-27496925 | None:intergenic | 30.0% | |
| !! | CTTGTTTAGGGATTTAGTTT+TGG | + | chr5_4:27496904-27496923 | Msa0846760:intron | 30.0% |
| !! | TCAACTTCATTTTTCGGAAA+TGG | + | chr5_4:27496943-27496962 | Msa0846760:intron | 30.0% |
| ATTTACCACTCTCAAAACTA+GGG | - | chr5_4:27497046-27497065 | None:intergenic | 30.0% | |
| AATTTACCACTCTCAAAACT+AGG | - | chr5_4:27497047-27497066 | None:intergenic | 30.0% | |
| !!! | AGTTTTGAGAGTGGTAAATT+CGG | + | chr5_4:27497047-27497066 | Msa0846760:intron | 30.0% |
| GTGGACGTTTAATGTTAAAT+TGG | - | chr5_4:27497078-27497097 | None:intergenic | 30.0% | |
| !! | AATGTGTTGTTTGAACAATC+TGG | - | chr5_4:27497332-27497351 | None:intergenic | 30.0% |
| GTGCTTATACAACATAGATT+TGG | + | chr5_4:27497680-27497699 | Msa0846760:intron | 30.0% | |
| !! | AACATAGATTTGGGATGTTT+TGG | + | chr5_4:27497690-27497709 | Msa0846760:intron | 30.0% |
| ! | ATAGTATTGAGAGCAAAGAT+TGG | + | chr5_4:27497794-27497813 | Msa0846760:intron | 30.0% |
| ! | TAGTATTGAGAGCAAAGATT+GGG | + | chr5_4:27497795-27497814 | Msa0846760:intron | 30.0% |
| !! | TTATGAGTTTTGTCCAAAAG+AGG | + | chr5_4:27497908-27497927 | Msa0846760:intron | 30.0% |
| ! | GTAAATTGTTTGACCTCTTT+TGG | - | chr5_4:27497924-27497943 | None:intergenic | 30.0% |
| CTTAGATTCTGATCAAACAT+GGG | - | chr5_4:27498385-27498404 | None:intergenic | 30.0% | |
| TCTTAGATTCTGATCAAACA+TGG | - | chr5_4:27498386-27498405 | None:intergenic | 30.0% | |
| ! | ACCATGTTCAAACATGTTTT+AGG | + | chr5_4:27498643-27498662 | Msa0846760:intron | 30.0% |
| GTACAAATAGGCATAAAACA+AGG | - | chr5_4:27498724-27498743 | None:intergenic | 30.0% | |
| TATCTATACAGAATCAGTTG+TGG | + | chr5_4:27498804-27498823 | Msa0846760:intron | 30.0% | |
| GAAAATATTGTTACTCCTTG+AGG | - | chr5_4:27498837-27498856 | None:intergenic | 30.0% | |
| ! | CAAGGAGTAACAATATTTTC+GGG | + | chr5_4:27498837-27498856 | Msa0846760:intron | 30.0% |
| TATGGAAAGTCCTAAAATGT+AGG | - | chr5_4:27498899-27498918 | None:intergenic | 30.0% | |
| CCATATATACTGAAGCAATA+TGG | - | chr5_4:27498996-27499015 | None:intergenic | 30.0% | |
| CCATATTGCTTCAGTATATA+TGG | + | chr5_4:27498993-27499012 | Msa0846760:intron | 30.0% | |
| !! | TATCGTTTTGATGCAAGTAT+AGG | + | chr5_4:27499111-27499130 | Msa0846760:intron | 30.0% |
| GTATCAAGATGATACAAGAA+AGG | - | chr5_4:27499156-27499175 | None:intergenic | 30.0% | |
| ! | TTATGTTTGTTAGCATGATG+TGG | + | chr5_4:27499541-27499560 | Msa0846760:intron | 30.0% |
| ! | TATGTTTGTTAGCATGATGT+GGG | + | chr5_4:27499542-27499561 | Msa0846760:intron | 30.0% |
| !!! | GGAACCAAGGTTTTAAAAAA+CGG | + | chr5_4:27499563-27499582 | Msa0846760:intron | 30.0% |
| !!! | GAACCAAGGTTTTAAAAAAC+GGG | + | chr5_4:27499564-27499583 | Msa0846760:intron | 30.0% |
| TTTCTTTCTCAGCGTTAAAA+GGG | - | chr5_4:27499650-27499669 | None:intergenic | 30.0% | |
| ATTTCTTTCTCAGCGTTAAA+AGG | - | chr5_4:27499651-27499670 | None:intergenic | 30.0% | |
| AACCACAAAAATACAAGAAC+AGG | + | chr5_4:27499795-27499814 | Msa0846760:intron | 30.0% | |
| ACCACAAAAATACAAGAACA+GGG | + | chr5_4:27499796-27499815 | Msa0846760:intron | 30.0% | |
| AATCAATTACTTCCCTTCTT+TGG | + | chr5_4:27499894-27499913 | Msa0846760:intron | 30.0% | |
| TAGAACATCTTGATATTGTG+TGG | + | chr5_4:27500845-27500864 | Msa0846760:intron | 30.0% | |
| !! | GAAAGAGTTGATAGATTCAT+GGG | + | chr5_4:27501062-27501081 | Msa0846760:CDS | 30.0% |
| CATTTAATCCTTCTTTAAGC+AGG | + | chr5_4:27501174-27501193 | Msa0846760:intron | 30.0% | |
| AAAAAAAAAACTAGAGAGGC+CGG | + | chr5_4:27501296-27501315 | Msa0846760:intron | 30.0% | |
| TGAAGAAAGGTTGAAATCTT+TGG | + | chr5_4:27501397-27501416 | Msa0846760:CDS | 30.0% | |
| TATGTAAAACTAGTTGCAGA+CGG | + | chr5_4:27501443-27501462 | Msa0846760:CDS | 30.0% | |
| AGGAAAGCCAAAAGAAAATT+CGG | + | chr5_4:27501483-27501502 | Msa0846760:CDS | 30.0% | |
| CCATAAATTCTCCATTCTAC+TGG | - | chr5_4:27494410-27494429 | None:intergenic | 35.0% | |
| CCAGTAGAATGGAGAATTTA+TGG | + | chr5_4:27494407-27494426 | Msa0846760:exon | 35.0% | |
| ! | TCAAATGAGGTTAGTTGTTC+TGG | + | chr5_4:27494432-27494451 | Msa0846760:intron | 35.0% |
| TTTCCACACATCTTATTGGA+TGG | + | chr5_4:27494461-27494480 | Msa0846760:intron | 35.0% | |
| TTACCATCCAATAAGATGTG+TGG | - | chr5_4:27494467-27494486 | None:intergenic | 35.0% | |
| !!! | AAAAGCTAGTTTTTCAAGGC+TGG | + | chr5_4:27494569-27494588 | Msa0846760:intron | 35.0% |
| ! | AGATTTTCAATGGAGAGAGT+CGG | - | chr5_4:27494657-27494676 | None:intergenic | 35.0% |
| ATATAGCTATCATTGATCGG+GGG | - | chr5_4:27494834-27494853 | None:intergenic | 35.0% | |
| GATATAGCTATCATTGATCG+GGG | - | chr5_4:27494835-27494854 | None:intergenic | 35.0% | |
| TTTGTTAGGGTACAACTTAC+CGG | + | chr5_4:27494977-27494996 | Msa0846760:intron | 35.0% | |
| CAGAAAACCCAATCTTTCAA+AGG | + | chr5_4:27495055-27495074 | Msa0846760:CDS | 35.0% | |
| ATGAGAGAAATGAAGGTAAG+GGG | - | chr5_4:27495101-27495120 | None:intergenic | 35.0% | |
| CAATGAGAGAAATGAAGGTA+AGG | - | chr5_4:27495103-27495122 | None:intergenic | 35.0% | |
| CATCTTATTATGTACCCCAT+TGG | + | chr5_4:27495145-27495164 | Msa0846760:intron | 35.0% | |
| ATTTCAATCACTCTCCAATG+GGG | - | chr5_4:27495162-27495181 | None:intergenic | 35.0% | |
| !!! | TTATTTTTTGGTGGTGTCTG+GGG | - | chr5_4:27495340-27495359 | None:intergenic | 35.0% |
| TTCTTCTTCTCTGTTGAACA+TGG | - | chr5_4:27495457-27495476 | None:intergenic | 35.0% | |
| ATGTTCAACAGAGAAGAAGA+AGG | + | chr5_4:27495456-27495475 | Msa0846760:intron | 35.0% | |
| TGTTCAACAGAGAAGAAGAA+GGG | + | chr5_4:27495457-27495476 | Msa0846760:intron | 35.0% | |
| ! | AAACAGCTTTCAGGTAAAAC+AGG | + | chr5_4:27495496-27495515 | Msa0846760:CDS | 35.0% |
| TTTCTATGTGGTCGTAATCA+TGG | - | chr5_4:27495522-27495541 | None:intergenic | 35.0% | |
| TGATTACGACCACATAGAAA+TGG | + | chr5_4:27495522-27495541 | Msa0846760:CDS | 35.0% | |
| ACTTTGTCTGCATCATGTTT+AGG | + | chr5_4:27495798-27495817 | Msa0846760:intron | 35.0% | |
| AGAAGAAAAGAAACCGGAAA+AGG | + | chr5_4:27495875-27495894 | Msa0846760:CDS | 35.0% | |
| !! | GTTGCAGTCTTTTTCATTGT+TGG | - | chr5_4:27495915-27495934 | None:intergenic | 35.0% |
| AAAAAGACTGCAACTTTCAC+TGG | + | chr5_4:27495921-27495940 | Msa0846760:CDS | 35.0% | |
| ! | TCTGAAGTCTTCATAATTGG+TGG | - | chr5_4:27496002-27496021 | None:intergenic | 35.0% |
| ACTACAACAGGATCAAACAA+TGG | + | chr5_4:27496044-27496063 | Msa0846760:CDS | 35.0% | |
| CTACAACAGGATCAAACAAT+GGG | + | chr5_4:27496045-27496064 | Msa0846760:CDS | 35.0% | |
| TACAACAGGATCAAACAATG+GGG | + | chr5_4:27496046-27496065 | Msa0846760:CDS | 35.0% | |
| AACTCGACAAGATCAAACAA+AGG | + | chr5_4:27496099-27496118 | Msa0846760:CDS | 35.0% | |
| !! | CAAGATCAAACAAAGGTACT+TGG | + | chr5_4:27496106-27496125 | Msa0846760:intron | 35.0% |
| CTGAATGTAATGCTTGATTC+AGG | - | chr5_4:27496198-27496217 | None:intergenic | 35.0% | |
| TCCTTATTAGCTGTCTAGTA+TGG | + | chr5_4:27496403-27496422 | Msa0846760:intron | 35.0% | |
| TCCATACTAGACAGCTAATA+AGG | - | chr5_4:27496407-27496426 | None:intergenic | 35.0% | |
| TAAAAGAAACTAGAAAGGCC+GGG | + | chr5_4:27496444-27496463 | Msa0846760:intron | 35.0% | |
| AATTGCAGAGTGAAATGGAA+CGG | + | chr5_4:27496516-27496535 | Msa0846760:intron | 35.0% | |
| AATGAAGAGCTACAAGCAAA+AGG | + | chr5_4:27496635-27496654 | Msa0846760:CDS | 35.0% | |
| ATGAAGAGCTACAAGCAAAA+GGG | + | chr5_4:27496636-27496655 | Msa0846760:CDS | 35.0% | |
| TCACTAATTGCCAAACATCA+AGG | + | chr5_4:27496718-27496737 | Msa0846760:intron | 35.0% | |
| !! | CGACTGTCAACTTCATTTTT+CGG | + | chr5_4:27496937-27496956 | Msa0846760:intron | 35.0% |
| ! | GATCAATTTTGTGTCAGATC+AGG | + | chr5_4:27496999-27497018 | Msa0846760:intron | 35.0% |
| CTCTCAAAACTAGGGTTAAT+AGG | - | chr5_4:27497038-27497057 | None:intergenic | 35.0% | |
| !!! | ATTAACCCTAGTTTTGAGAG+TGG | + | chr5_4:27497038-27497057 | Msa0846760:intron | 35.0% |
| !!! | GTTTTGAGAGTGGTAAATTC+GGG | + | chr5_4:27497048-27497067 | Msa0846760:intron | 35.0% |
| TTTAGGTCAAATACCGTTTG+CGG | - | chr5_4:27497225-27497244 | None:intergenic | 35.0% | |
| CAAGAGTTAGTGAGTATATC+TGG | + | chr5_4:27497295-27497314 | Msa0846760:intron | 35.0% | |
| GATATTTATCCACATAGCGA+TGG | - | chr5_4:27497511-27497530 | None:intergenic | 35.0% | |
| GAAAAAACTGCCACATAACT+TGG | - | chr5_4:27497541-27497560 | None:intergenic | 35.0% | |
| TAGACTTATAGTGCAAGCAA+AGG | + | chr5_4:27497602-27497621 | Msa0846760:intron | 35.0% | |
| AAGCAAAGGTAGTAGTTTGA+AGG | + | chr5_4:27497616-27497635 | Msa0846760:intron | 35.0% | |
| ! | GGAGATTTTACCAAAAGAGT+TGG | + | chr5_4:27497649-27497668 | Msa0846760:intron | 35.0% |
| ! | ACTACAAAGACCAACTCTTT+TGG | - | chr5_4:27497662-27497681 | None:intergenic | 35.0% |
| !! | TAGATTTGGGATGTTTTGGA+AGG | + | chr5_4:27497694-27497713 | Msa0846760:intron | 35.0% |
| CAACACAATTGTTCTCTTCA+CGG | - | chr5_4:27497843-27497862 | None:intergenic | 35.0% | |
| ! | GAACAATTGTGTTGATGCAA+TGG | + | chr5_4:27497849-27497868 | Msa0846760:intron | 35.0% |
| AGGTCAAACAATTTACTCCA+CGG | + | chr5_4:27497928-27497947 | Msa0846760:intron | 35.0% | |
| CACTATGCAAGATATATGAC+TGG | - | chr5_4:27498259-27498278 | None:intergenic | 35.0% | |
| TCTTGTTGCCACTATTAACA+AGG | - | chr5_4:27498294-27498313 | None:intergenic | 35.0% | |
| TTAGGGAGCAACAAAATGAA+TGG | + | chr5_4:27498552-27498571 | Msa0846760:intron | 35.0% | |
| TAGGGAGCAACAAAATGAAT+GGG | + | chr5_4:27498553-27498572 | Msa0846760:intron | 35.0% | |
| !! | AAAATGAATGGGAGAGTGTT+CGG | + | chr5_4:27498564-27498583 | Msa0846760:intron | 35.0% |
| ! | AGAGTGTTCGGTATTTGTAT+TGG | + | chr5_4:27498576-27498595 | Msa0846760:intron | 35.0% |
| GCCTAAAACATGTTTGAACA+TGG | - | chr5_4:27498647-27498666 | None:intergenic | 35.0% | |
| !!! | ACGCGCGTTTTTTCTTATTA+AGG | + | chr5_4:27498742-27498761 | Msa0846760:intron | 35.0% |
| !!! | AGTTGTGGTTTTATTCCTCA+AGG | + | chr5_4:27498819-27498838 | Msa0846760:intron | 35.0% |
| GACGGCTTGAATGAATAATT+AGG | - | chr5_4:27499031-27499050 | None:intergenic | 35.0% | |
| !! | TACACCAAAACTTTGAAGCA+AGG | + | chr5_4:27499213-27499232 | Msa0846760:intron | 35.0% |
| ! | ACAACCTTGCTTCAAAGTTT+TGG | - | chr5_4:27499220-27499239 | None:intergenic | 35.0% |
| ! | AGGTTGTAGTTTGTGTTTGA+AGG | + | chr5_4:27499233-27499252 | Msa0846760:intron | 35.0% |
| !! | ATGAGTTTGTTGACACAGTT+CGG | - | chr5_4:27499481-27499500 | None:intergenic | 35.0% |
| TTCTTTCTCAGCGTTAAAAG+GGG | - | chr5_4:27499649-27499668 | None:intergenic | 35.0% | |
| CCACAAAAATACAAGAACAG+GGG | + | chr5_4:27499797-27499816 | Msa0846760:intron | 35.0% | |
| ! | TACAAAAGATTTGAGATGCC+TGG | - | chr5_4:27499849-27499868 | None:intergenic | 35.0% |
| ! | ACATTCGTTTTCTGTGTACT+TGG | + | chr5_4:27500807-27500826 | Msa0846760:intron | 35.0% |
| !! | CAAGATCAAACAAAGGTACT+TGG | + | chr5_4:27496106-27496125 | Msa0846760:intron | 35.0% |
| !! | AAACAAAGGTACTTGGAAGA+AGG | + | chr5_4:27496113-27496132 | Msa0846760:intron | 35.0% |
| !! | GGAAAGAGTTGATAGATTCA+TGG | + | chr5_4:27501061-27501080 | Msa0846760:CDS | 35.0% |
| ATTCATGGGAAGACAAGAAA+AGG | + | chr5_4:27501076-27501095 | Msa0846760:CDS | 35.0% | |
| ! | TCTCTCAGACACTCTTTTTA+AGG | + | chr5_4:27501135-27501154 | Msa0846760:intron | 35.0% |
| TTTCATGACCTGCTTAAAGA+AGG | - | chr5_4:27501185-27501204 | None:intergenic | 35.0% | |
| AAAAAAAAACTAGAGAGGCC+GGG | + | chr5_4:27501297-27501316 | Msa0846760:intron | 35.0% | |
| ! | GTTCACTCCGAATTTTCTTT+TGG | - | chr5_4:27501493-27501512 | None:intergenic | 35.0% |
| ! | TTCAATTCTTCGGCTTTTCT+CGG | - | chr5_4:27501603-27501622 | None:intergenic | 35.0% |
| CTTGTAGCTCTTCAATTCTT+CGG | - | chr5_4:27501613-27501632 | None:intergenic | 35.0% | |
| AATTCTCCATTCTACTGGGA+GGG | - | chr5_4:27494405-27494424 | None:intergenic | 40.0% | |
| AAATTCTCCATTCTACTGGG+AGG | - | chr5_4:27494406-27494425 | None:intergenic | 40.0% | |
| TCTTGTTGCCACCATTAACA+TGG | - | chr5_4:27494545-27494564 | None:intergenic | 40.0% | |
| ! | GGGTATCGTTGATCAAACAT+GGG | - | chr5_4:27494636-27494655 | None:intergenic | 40.0% |
| ! | GATTTTCAATGGAGAGAGTC+GGG | - | chr5_4:27494656-27494675 | None:intergenic | 40.0% |
| ! | AGGTATTTTCCGATCTCTTG+TGG | - | chr5_4:27495032-27495051 | None:intergenic | 40.0% |
| TACCAACTGAGCTAAGTTCA+CGG | - | chr5_4:27495279-27495298 | None:intergenic | 40.0% | |
| ! | TGAACTTAGCTCAGTTGGTA+AGG | + | chr5_4:27495279-27495298 | Msa0846760:intron | 40.0% |
| !!! | GCTGTTTTTGCAACCAATTC+TGG | - | chr5_4:27495483-27495502 | None:intergenic | 40.0% |
| TGGTTGCAAAAACAGCTTTC+AGG | + | chr5_4:27495487-27495506 | Msa0846760:CDS | 40.0% | |
| TAGTGCATCCAAGCGATTAT+CGG | + | chr5_4:27495687-27495706 | Msa0846760:CDS | 40.0% | |
| ATCTTTACCCGATAATCGCT+TGG | - | chr5_4:27495698-27495717 | None:intergenic | 40.0% | |
| !! | GTCTTTTTCATTGTTGGCGT+AGG | - | chr5_4:27495909-27495928 | None:intergenic | 40.0% |
| GAAGTCTTCATAATTGGTGG+TGG | - | chr5_4:27495999-27496018 | None:intergenic | 40.0% | |
| GTAATGCTTGATTCAGGAGA+TGG | - | chr5_4:27496192-27496211 | None:intergenic | 40.0% | |
| ATTCCTGGGAAGACAAGAAA+AGG | + | chr5_4:27496272-27496291 | Msa0846760:CDS | 40.0% | |
| !! | TTGCTTCATTAGCTTGCGTT+TGG | - | chr5_4:27496305-27496324 | None:intergenic | 40.0% |
| ACGGAGAAGGTTAAAAGCTT+TGG | + | chr5_4:27496535-27496554 | Msa0846760:CDS | 40.0% | |
| CTCTCAAACTCCTTGATGTT+TGG | - | chr5_4:27496731-27496750 | None:intergenic | 40.0% | |
| CAAACATCAAGGAGTTTGAG+AGG | + | chr5_4:27496729-27496748 | Msa0846760:intron | 40.0% | |
| ATCATTCCGACCAAGTTATG+TGG | + | chr5_4:27497528-27497547 | Msa0846760:intron | 40.0% | |
| AAACTGCCACATAACTTGGT+CGG | - | chr5_4:27497537-27497556 | None:intergenic | 40.0% | |
| TAGTTTGAAGGAGAGTGGTT+TGG | + | chr5_4:27497628-27497647 | Msa0846760:intron | 40.0% | |
| !!! | TGTTTTGGAAGGTTTGAAGC+TGG | + | chr5_4:27497705-27497724 | Msa0846760:intron | 40.0% |
| ! | TTATAGCGTTGAGTTGTGTG+TGG | + | chr5_4:27497744-27497763 | Msa0846760:intron | 40.0% |
| TGTTGATGCAATGGCGAAAA+TGG | + | chr5_4:27497858-27497877 | Msa0846760:intron | 40.0% | |
| GCAATGGCGAAAATGGTAAT+TGG | + | chr5_4:27497865-27497884 | Msa0846760:intron | 40.0% | |
| CATTACAACAGAACTAACCG+TGG | - | chr5_4:27497948-27497967 | None:intergenic | 40.0% | |
| TAAATCCTCCTCCATTCTTC+CGG | - | chr5_4:27498156-27498175 | None:intergenic | 40.0% | |
| GAAGAATGGAGGAGGATTTA+TGG | + | chr5_4:27498156-27498175 | Msa0846760:intron | 40.0% | |
| AGGATTTATGGAGGCAAATG+AGG | + | chr5_4:27498168-27498187 | Msa0846760:intron | 40.0% | |
| ! | TAGGCATTTTCACGAGATGT+TGG | + | chr5_4:27498662-27498681 | Msa0846760:intron | 40.0% |
| GATGTTTCAACATCCTGACA+CGG | + | chr5_4:27498689-27498708 | Msa0846760:intron | 40.0% | |
| GAAAAAACGCGCGTACAAAT+AGG | - | chr5_4:27498736-27498755 | None:intergenic | 40.0% | |
| TGCTTGGTCAACAAGATATG+TGG | - | chr5_4:27498777-27498796 | None:intergenic | 40.0% | |
| ! | GTATAGATATGCGTGTTGCT+TGG | - | chr5_4:27498793-27498812 | None:intergenic | 40.0% |
| ATGGGCTCAATAACCTTGTT+GGG | - | chr5_4:27498977-27498996 | None:intergenic | 40.0% | |
| TATGGGCTCAATAACCTTGT+TGG | - | chr5_4:27498978-27498997 | None:intergenic | 40.0% | |
| CAGGGGTTGTGATTGATTAT+AGG | + | chr5_4:27499291-27499310 | Msa0846760:intron | 40.0% | |
| TGAGATGAGATCTCAGATCT+AGG | + | chr5_4:27499318-27499337 | Msa0846760:intron | 40.0% | |
| TCTCAGATCTAGGAATTCCT+AGG | + | chr5_4:27499328-27499347 | Msa0846760:intron | 40.0% | |
| ACACGTCTAGATTTCAACCT+AGG | - | chr5_4:27499348-27499367 | None:intergenic | 40.0% | |
| TAGTGATTTCCTTCCTTGCT+TGG | + | chr5_4:27499428-27499447 | Msa0846760:intron | 40.0% | |
| !!! | CGTCCCGTTTTTTAAAACCT+TGG | - | chr5_4:27499570-27499589 | None:intergenic | 40.0% |
| !!! | ATTTGTAACGGCCGTTTTTG+CGG | - | chr5_4:27499596-27499615 | None:intergenic | 40.0% |
| CAAAAACGGCCGTTACAAAT+CGG | + | chr5_4:27499596-27499615 | Msa0846760:intron | 40.0% | |
| AAAAGGGGCAAAAACGGTAA+CGG | - | chr5_4:27499634-27499653 | None:intergenic | 40.0% | |
| AGCGTTAAAAGGGGCAAAAA+CGG | - | chr5_4:27499640-27499659 | None:intergenic | 40.0% | |
| TCACAGAAAAAACGCCGTTA+CGG | + | chr5_4:27499671-27499690 | Msa0846760:intron | 40.0% | |
| AACAGAAGAACAGGAGAAGA+AGG | + | chr5_4:27499741-27499760 | Msa0846760:intron | 40.0% | |
| !! | CCCCTGTTCTTGTATTTTTG+TGG | - | chr5_4:27499800-27499819 | None:intergenic | 40.0% |
| AAATACAAGAACAGGGGAAG+AGG | + | chr5_4:27499803-27499822 | Msa0846760:intron | 40.0% | |
| ! | TCTTATCTTTTGTACCAGCC+AGG | + | chr5_4:27499828-27499847 | Msa0846760:intron | 40.0% |
| CAATTACTTCCCTTCTTTGG+TGG | + | chr5_4:27499897-27499916 | Msa0846760:intron | 40.0% | |
| AGAATCACACCACCAAAGAA+GGG | - | chr5_4:27499909-27499928 | None:intergenic | 40.0% | |
| AAGAATCACACCACCAAAGA+AGG | - | chr5_4:27499910-27499929 | None:intergenic | 40.0% | |
| GATACAAATAACGGTCTTCG+CGG | - | chr5_4:27500697-27500716 | None:intergenic | 40.0% | |
| !! | AAGGTTCTAAAAAACGGTCG+CGG | - | chr5_4:27500768-27500787 | None:intergenic | 40.0% |
| !!! | ACCGTTTTTTAGAACCTTGG+TGG | + | chr5_4:27500770-27500789 | Msa0846760:intron | 40.0% |
| !! | CCCACCAAGGTTCTAAAAAA+CGG | - | chr5_4:27500774-27500793 | None:intergenic | 40.0% |
| !!! | CCGTTTTTTAGAACCTTGGT+GGG | + | chr5_4:27500771-27500790 | Msa0846760:intron | 40.0% |
| !!! | GTTTTCTGTGTACTTGGTGT+TGG | + | chr5_4:27500813-27500832 | Msa0846760:intron | 40.0% |
| GCGTGACATGATCAAACAAT+GGG | + | chr5_4:27500874-27500893 | Msa0846760:intron | 40.0% | |
| AGCTCGACAAGATCAAACAA+AGG | + | chr5_4:27500918-27500937 | Msa0846760:intron | 40.0% | |
| ACATTGTCAGGTATGAGAAG+TGG | + | chr5_4:27496236-27496255 | Msa0846760:intron | 40.0% | |
| !!! | CTCCCACAACATTTTTTACC+CGG | - | chr5_4:27501318-27501337 | None:intergenic | 40.0% |
| TGCAGAGTGAACTTGAAGAA+AGG | + | chr5_4:27501384-27501403 | Msa0846760:intron | 40.0% | |
| ACAGCGAAGGTTGAAATCTA+AGG | + | chr5_4:27501517-27501536 | Msa0846760:CDS | 40.0% | |
| GCAAGTACAATTCCAACAAC+AGG | + | chr5_4:27501644-27501663 | Msa0846760:CDS | 40.0% | |
| CAGAAGCAGAAATACTTCTG+TGG | - | chr5_4:27501677-27501696 | None:intergenic | 40.0% | |
| ACAAAACCCTCCCAGTAGAA+TGG | + | chr5_4:27494396-27494415 | Msa0846760:exon | 45.0% | |
| CAACAAGCTAGGTATGTGTC+TGG | - | chr5_4:27494510-27494529 | None:intergenic | 45.0% | |
| ! | CGGGTATCGTTGATCAAACA+TGG | - | chr5_4:27494637-27494656 | None:intergenic | 45.0% |
| AGGACCATATTGTCCCTGAA+GGG | + | chr5_4:27494800-27494819 | Msa0846760:intron | 45.0% | |
| CTATCATTGATCGGGGGAAA+GGG | - | chr5_4:27494828-27494847 | None:intergenic | 45.0% | |
| TAGGGTACAACTTACCGGTA+CGG | + | chr5_4:27494982-27495001 | Msa0846760:intron | 45.0% | |
| GAGGAGAACAAAGCTGATCT+TGG | + | chr5_4:27495004-27495023 | Msa0846760:CDS | 45.0% | |
| !! | ATCTTGGTGCCACAAGAGAT+CGG | + | chr5_4:27495020-27495039 | Msa0846760:CDS | 45.0% |
| AGAAGAAGAAGGGCCAGAAT+TGG | + | chr5_4:27495467-27495486 | Msa0846760:CDS | 45.0% | |
| CAGCATGCACCATTTCTATG+TGG | - | chr5_4:27495534-27495553 | None:intergenic | 45.0% | |
| AAGCTCAAAAGCAAGGTGGA+CGG | + | chr5_4:27495637-27495656 | Msa0846760:CDS | 45.0% | |
| CTTGGATGCACTACTGAGAA+GGG | - | chr5_4:27495680-27495699 | None:intergenic | 45.0% | |
| AGTGCATCCAAGCGATTATC+GGG | + | chr5_4:27495688-27495707 | Msa0846760:CDS | 45.0% | |
| TAAAGATGACCAGGGTGACA+AGG | + | chr5_4:27495833-27495852 | Msa0846760:CDS | 45.0% | |
| ! | GTAGGAGTAATGGCCTTTTC+CGG | - | chr5_4:27495891-27495910 | None:intergenic | 45.0% |
| CATTGTTGGCGTAGGAGTAA+TGG | - | chr5_4:27495901-27495920 | None:intergenic | 45.0% | |
| !! | GTCTTCATAATTGGTGGTGG+CGG | - | chr5_4:27495996-27496015 | None:intergenic | 45.0% |
| GTAGTCTGTCTTAGAGGATC+AGG | - | chr5_4:27496029-27496048 | None:intergenic | 45.0% | |
| CCTGTTGTAGTCTGTCTTAG+AGG | - | chr5_4:27496035-27496054 | None:intergenic | 45.0% | |
| !! | CCTCTAAGACAGACTACAAC+AGG | + | chr5_4:27496032-27496051 | Msa0846760:CDS | 45.0% |
| GGAGACAGATGCAGATGAAT+GGG | + | chr5_4:27496067-27496086 | Msa0846760:CDS | 45.0% | |
| ! | CATCCTTTTCTTGTCTTCCC+AGG | - | chr5_4:27496278-27496297 | None:intergenic | 45.0% |
| ACGCAAGCTAATGAAGCAAG+AGG | + | chr5_4:27496306-27496325 | Msa0846760:CDS | 45.0% | |
| AGGCCGGGTAAAAAATGTTG+TGG | + | chr5_4:27496459-27496478 | Msa0846760:intron | 45.0% | |
| GGCCGGGTAAAAAATGTTGT+GGG | + | chr5_4:27496460-27496479 | Msa0846760:intron | 45.0% | |
| !!! | CGCCCACAACATTTTTTACC+CGG | - | chr5_4:27496465-27496484 | None:intergenic | 45.0% |
| AGAGTGAAATGGAACGGAGA+AGG | + | chr5_4:27496522-27496541 | Msa0846760:intron | 45.0% | |
| AGAGCTACAAGCAAAAGGGA+AGG | + | chr5_4:27496640-27496659 | Msa0846760:CDS | 45.0% | |
| CAGAAGCAGAAATACATCCG+TGG | - | chr5_4:27496695-27496714 | None:intergenic | 45.0% | |
| ! | CGGATGTATTTCTGCTTCTG+AGG | + | chr5_4:27496695-27496714 | Msa0846760:intron | 45.0% |
| CTGTCTTAAAGGACCGCAAA+CGG | + | chr5_4:27497209-27497228 | Msa0846760:intron | 45.0% | |
| ATCCACATAGCGATGGCTAA+TGG | - | chr5_4:27497504-27497523 | None:intergenic | 45.0% | |
| !!! | GTGGCAGTTTTTTCCTTCTC+TGG | + | chr5_4:27497547-27497566 | Msa0846760:intron | 45.0% |
| GGTAGTAGTTTGAAGGAGAG+TGG | + | chr5_4:27497623-27497642 | Msa0846760:intron | 45.0% | |
| ACCAGAGAATAAAACCCACC+CGG | + | chr5_4:27498134-27498153 | Msa0846760:intron | 45.0% | |
| ATAAAACCCACCCGGAAGAA+TGG | + | chr5_4:27498142-27498161 | Msa0846760:intron | 45.0% | |
| AAATCCTCCTCCATTCTTCC+GGG | - | chr5_4:27498155-27498174 | None:intergenic | 45.0% | |
| GAATGGAGGAGGATTTATGG+AGG | + | chr5_4:27498159-27498178 | Msa0846760:intron | 45.0% | |
| ! | GGCAAATGAGGTTAGTTGCT+CGG | + | chr5_4:27498180-27498199 | Msa0846760:intron | 45.0% |
| GTCAACAAGATATGTGGACG+TGG | - | chr5_4:27498771-27498790 | None:intergenic | 45.0% | |
| !! | CATTGTTCTGAAGCCCAACA+AGG | + | chr5_4:27498961-27498980 | Msa0846760:intron | 45.0% |
| TGACATACACACCTACTCTG+GGG | - | chr5_4:27499458-27499477 | None:intergenic | 45.0% | |
| GTGACATACACACCTACTCT+GGG | - | chr5_4:27499459-27499478 | None:intergenic | 45.0% | |
| TTAGCATGATGTGGGAACCA+AGG | + | chr5_4:27499550-27499569 | Msa0846760:intron | 45.0% | |
| !! | CTGCCGATACCGATTTGTAA+CGG | - | chr5_4:27499608-27499627 | None:intergenic | 45.0% |
| !! | TTACAAATCGGTATCGGCAG+TGG | + | chr5_4:27499608-27499627 | Msa0846760:intron | 45.0% |
| TCTCCTGTTCTTCTGTTTCG+CGG | - | chr5_4:27499738-27499757 | None:intergenic | 45.0% | |
| AAGAACAGGAGAAGAAGGAC+AGG | + | chr5_4:27499746-27499765 | Msa0846760:intron | 45.0% | |
| ! | AAAGATTTGAGATGCCTGGC+TGG | - | chr5_4:27499845-27499864 | None:intergenic | 45.0% |
| CACTTATCACAAACCTGCCT+GGG | - | chr5_4:27500115-27500134 | None:intergenic | 45.0% | |
| TCACTTATCACAAACCTGCC+TGG | - | chr5_4:27500116-27500135 | None:intergenic | 45.0% | |
| GGACGCTGCGATACAAATAA+CGG | - | chr5_4:27500706-27500725 | None:intergenic | 45.0% | |
| CGTTAAGGTTGTCGCGATTT+CGG | - | chr5_4:27500736-27500755 | None:intergenic | 45.0% | |
| !!! | GCGACCGTTTTTTAGAACCT+TGG | + | chr5_4:27500767-27500786 | Msa0846760:intron | 45.0% |
| TGCGTTTAATGTTCCCACCA+AGG | - | chr5_4:27500787-27500806 | None:intergenic | 45.0% | |
| CGCGTGACATGATCAAACAA+TGG | + | chr5_4:27500873-27500892 | Msa0846760:intron | 45.0% | |
| TCAAACAATGGGCACGAGAA+TGG | + | chr5_4:27500885-27500904 | Msa0846760:intron | 45.0% | |
| CAAACAATGGGCACGAGAAT+GGG | + | chr5_4:27500886-27500905 | Msa0846760:intron | 45.0% | |
| ! | TTCCTTCACTAGCTTGCGTT+TGG | - | chr5_4:27501109-27501128 | None:intergenic | 45.0% |
| AGGCCGGGTAAAAAATGTTG+TGG | + | chr5_4:27496459-27496478 | Msa0846760:intron | 45.0% | |
| GGCCGGGTAAAAAATGTTGT+GGG | + | chr5_4:27496460-27496479 | Msa0846760:intron | 45.0% | |
| AGAGCTACAAGCAAGAGAGA+AGG | + | chr5_4:27501622-27501641 | Msa0846760:CDS | 45.0% | |
| !!! | ACTGGGAGGGTTTTGTTCTC+AGG | - | chr5_4:27494392-27494411 | None:intergenic | 50.0% |
| CAGGACCATATTGTCCCTGA+AGG | + | chr5_4:27494799-27494818 | Msa0846760:intron | 50.0% | |
| GGTTCCCTTCAGGGACAATA+TGG | - | chr5_4:27494807-27494826 | None:intergenic | 50.0% | |
| GCTATCATTGATCGGGGGAA+AGG | - | chr5_4:27494829-27494848 | None:intergenic | 50.0% | |
| !! | AGCTTTGTTCTCCTCCGTAC+CGG | - | chr5_4:27494999-27495018 | None:intergenic | 50.0% |
| CTCCGTGAACTTAGCTCAGT+TGG | + | chr5_4:27495274-27495293 | Msa0846760:intron | 50.0% | |
| ATCGGCCAAGCTCAAAAGCA+AGG | + | chr5_4:27495630-27495649 | Msa0846760:CDS | 50.0% | |
| !! | GTCCACCTTGCTTTTGAGCT+TGG | - | chr5_4:27495638-27495657 | None:intergenic | 50.0% |
| GCTTGGATGCACTACTGAGA+AGG | - | chr5_4:27495681-27495700 | None:intergenic | 50.0% | |
| !! | TTCATAATTGGTGGTGGCGG+TGG | - | chr5_4:27495993-27496012 | None:intergenic | 50.0% |
| GGGAGACAGATGCAGATGAA+TGG | + | chr5_4:27496066-27496085 | Msa0846760:CDS | 50.0% | |
| GAACAGCATGCAAACTGCCA+CGG | + | chr5_4:27496675-27496694 | Msa0846760:CDS | 50.0% | |
| GTCCATTAGCCATCGCTATG+TGG | + | chr5_4:27497499-27497518 | Msa0846760:intron | 50.0% | |
| GCTATAAAAACCGCGCTCCT+TGG | - | chr5_4:27497731-27497750 | None:intergenic | 50.0% | |
| !!! | TCCGGGTGGGTTTTATTCTC+TGG | - | chr5_4:27498138-27498157 | None:intergenic | 50.0% |
| GACATACACACCTACTCTGG+GGG | - | chr5_4:27499457-27499476 | None:intergenic | 50.0% | |
| GGTGACATACACACCTACTC+TGG | - | chr5_4:27499460-27499479 | None:intergenic | 50.0% | |
| ACGGGACGTTACCGCAAAAA+CGG | + | chr5_4:27499582-27499601 | Msa0846760:intron | 50.0% | |
| CGGCCGTTACAAATCGGTAT+CGG | + | chr5_4:27499602-27499621 | Msa0846760:intron | 50.0% | |
| ACGACATTTCGCGGTCGTAA+CGG | - | chr5_4:27499710-27499729 | None:intergenic | 50.0% | |
| CTCCTGTTCTTCTGTTTCGC+GGG | - | chr5_4:27499737-27499756 | None:intergenic | 50.0% | |
| CAAATCGCAAGCAGGAAGGA+AGG | - | chr5_4:27499937-27499956 | None:intergenic | 50.0% | |
| ATCGCAAATCGCAAGCAGGA+AGG | - | chr5_4:27499941-27499960 | None:intergenic | 50.0% | |
| CAGAATCGCAAATCGCAAGC+AGG | - | chr5_4:27499945-27499964 | None:intergenic | 50.0% | |
| CTGCTTGCGATTTGCGATTC+TGG | + | chr5_4:27499943-27499962 | Msa0846760:intron | 50.0% | |
| GTTCGTTCTGCTTGCGATTC+TGG | + | chr5_4:27499967-27499986 | Msa0846760:intron | 50.0% | |
| TGTCGCGATTTCGGCTGTAA+CGG | - | chr5_4:27500727-27500746 | None:intergenic | 50.0% | |
| AGCCAAACGCAAGCTAGTGA+AGG | + | chr5_4:27501104-27501123 | Msa0846760:CDS | 50.0% | |
| ACGCAAGCTAGTGAAGGAAC+AGG | + | chr5_4:27501110-27501129 | Msa0846760:CDS | 50.0% | |
| !!! | CTTTTGGCTTTCCTCAGCCT+TGG | - | chr5_4:27501477-27501496 | None:intergenic | 50.0% |
| GGAGTGAACTTGAACAGCGA+AGG | + | chr5_4:27501504-27501523 | Msa0846760:CDS | 50.0% | |
| TGCAGATGCAGCGAGATTCA+AGG | + | chr5_4:27501577-27501596 | Msa0846760:CDS | 50.0% | |
| TGTGGCAGTTTGCCTGTTGT+TGG | - | chr5_4:27501659-27501678 | None:intergenic | 50.0% | |
| GGTACAACTTACCGGTACGG+AGG | + | chr5_4:27494985-27495004 | Msa0846760:CDS | 55.0% | |
| TGAGCAGAAGAGTGAGAGCC+CGG | + | chr5_4:27495600-27495619 | Msa0846760:CDS | 55.0% | |
| ! | GCTTTTGAGCTTGGCCGATG+AGG | - | chr5_4:27495629-27495648 | None:intergenic | 55.0% |
| GGCCAAGCTCAAAAGCAAGG+TGG | + | chr5_4:27495633-27495652 | Msa0846760:CDS | 55.0% | |
| ATGTTGACGCCTTGTCACCC+TGG | - | chr5_4:27495845-27495864 | None:intergenic | 55.0% | |
| !! | ATAATTGGTGGTGGCGGTGG+CGG | - | chr5_4:27495990-27496009 | None:intergenic | 55.0% |
| CACTGCTGCAACTCCAGAGA+AGG | - | chr5_4:27497563-27497582 | None:intergenic | 55.0% | |
| !! | CTTCTCTGGAGTTGCAGCAG+TGG | + | chr5_4:27497561-27497580 | Msa0846760:intron | 55.0% |
| ! | TCTGGAGTTGCAGCAGTGGT+TGG | + | chr5_4:27497565-27497584 | Msa0846760:intron | 55.0% |
| ! | GGAAGGTTTGAAGCTGGCCA+AGG | + | chr5_4:27497711-27497730 | Msa0846760:intron | 55.0% |
| AAACCCACCCGGAAGAATGG+AGG | + | chr5_4:27498145-27498164 | Msa0846760:intron | 55.0% | |
| AAGGCACACTGAACCGTGTC+AGG | - | chr5_4:27498705-27498724 | None:intergenic | 55.0% | |
| AAACGCCGTTACGGCCGTTA+CGG | + | chr5_4:27499680-27499699 | Msa0846760:intron | 55.0% | |
| GTCGTAACGGCGTTCCGTAA+CGG | - | chr5_4:27499697-27499716 | None:intergenic | 55.0% | |
| CTAAAAAACGGTCGCGGTCG+CGG | - | chr5_4:27500762-27500781 | None:intergenic | 55.0% | |
| TGCAGACGGAGCAAATGCCA+AGG | + | chr5_4:27501457-27501476 | Msa0846760:CDS | 55.0% | |
| GGGGGAAAGGGTTCCCTTCA+GGG | - | chr5_4:27494816-27494835 | None:intergenic | 60.0% | |
| !! | AGGAGGAGCATTTGGCGCTG+TGG | - | chr5_4:27495961-27495980 | None:intergenic | 60.0% |
| !! | TAATTGGTGGTGGCGGTGGC+GGG | - | chr5_4:27495989-27496008 | None:intergenic | 60.0% |
| TGCAGACGGCGCAAGAGCAA+AGG | + | chr5_4:27496595-27496614 | Msa0846760:CDS | 60.0% | |
| TTGAAGCTGGCCAAGGAGCG+CGG | + | chr5_4:27497718-27497737 | Msa0846760:intron | 60.0% | |
| CCTCCTCCATTCTTCCGGGT+GGG | - | chr5_4:27498151-27498170 | None:intergenic | 60.0% | |
| TCCTCCTCCATTCTTCCGGG+TGG | - | chr5_4:27498152-27498171 | None:intergenic | 60.0% | |
| TGGGGGCTACCAAGCAAGGA+AGG | - | chr5_4:27499440-27499459 | None:intergenic | 60.0% | |
| ! | ACTCTGGGGGCTACCAAGCA+AGG | - | chr5_4:27499444-27499463 | None:intergenic | 60.0% |
| ! | TGCTTGGTAGCCCCCAGAGT+AGG | + | chr5_4:27499444-27499463 | Msa0846760:intron | 60.0% |
| GCGTTCCGTAACGGCCGTAA+CGG | - | chr5_4:27499688-27499707 | None:intergenic | 60.0% | |
| GCGGGCGTAACGACATTTCG+CGG | - | chr5_4:27499719-27499738 | None:intergenic | 60.0% | |
| CGCCCGCGAAACAGAAGAAC+AGG | + | chr5_4:27499732-27499751 | Msa0846760:intron | 60.0% | |
| CACTTCTGCTTGCGTCTCCC+AGG | + | chr5_4:27500095-27500114 | Msa0846760:intron | 60.0% | |
| CGGAGCAAATGCCAAGGCTG+AGG | + | chr5_4:27501463-27501482 | Msa0846760:CDS | 60.0% | |
| CGGGGGAAAGGGTTCCCTTC+AGG | - | chr5_4:27494817-27494836 | None:intergenic | 65.0% | |
| GCAGAAGAGTGAGAGCCCGG+AGG | + | chr5_4:27495603-27495622 | Msa0846760:CDS | 65.0% | |
| TGAGAGCCCGGAGGCCTCAT+CGG | + | chr5_4:27495612-27495631 | Msa0846760:CDS | 65.0% | |
| AGCTTGGCCGATGAGGCCTC+CGG | - | chr5_4:27495622-27495641 | None:intergenic | 65.0% | |
| !! | GGGGGTGGAGGAGGAGCATT+TGG | - | chr5_4:27495969-27495988 | None:intergenic | 65.0% |
| !! | AATTGGTGGTGGCGGTGGCG+GGG | - | chr5_4:27495988-27496007 | None:intergenic | 65.0% |
| CGGCGCAAGAGCAAAGGTCG+AGG | + | chr5_4:27496601-27496620 | Msa0846760:CDS | 65.0% | |
| CCCACCCGGAAGAATGGAGG+AGG | + | chr5_4:27498148-27498167 | Msa0846760:intron | 65.0% | |
| TCTGCTTGCGTCTCCCAGGC+AGG | + | chr5_4:27500099-27500118 | Msa0846760:intron | 65.0% | |
| GCTTGGCCGATGAGGCCTCC+GGG | - | chr5_4:27495621-27495640 | None:intergenic | 70.0% | |
| !! | ATTGGTGGTGGCGGTGGCGG+GGG | - | chr5_4:27495987-27496006 | None:intergenic | 70.0% |
| TCGCGGTCGCGGTCGCGTTA+AGG | - | chr5_4:27500751-27500770 | None:intergenic | 70.0% | |
| !!! | GGCGGTGGCGGGGGTGGAGG+AGG | - | chr5_4:27495978-27495997 | None:intergenic | 85.0% |
| !!! | GGTGGCGGTGGCGGGGGTGG+AGG | - | chr5_4:27495981-27496000 | None:intergenic | 85.0% |
| !!! | GGTGGTGGCGGTGGCGGGGG+TGG | - | chr5_4:27495984-27496003 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 27494378 | 27501697 | 27494378 | ID=Msa0846760;Name=Msa0846760 |
| chr5_4 | mRNA | 27494378 | 27501697 | 27494378 | ID=Msa0846760-mRNA-1;Parent=Msa0846760;Name=Msa0846760-mRNA-1;_AED=0.31;_eAED=0.31;_QI=37|0.85|0.75|1|0.85|0.87|8|0|436 |
| chr5_4 | exon | 27494378 | 27494440 | 27494378 | ID=Msa0846760-mRNA-1:exon:10568;Parent=Msa0846760-mRNA-1 |
| chr5_4 | exon | 27494985 | 27495076 | 27494985 | ID=Msa0846760-mRNA-1:exon:10569;Parent=Msa0846760-mRNA-1 |
| chr5_4 | exon | 27495467 | 27495709 | 27495467 | ID=Msa0846760-mRNA-1:exon:10570;Parent=Msa0846760-mRNA-1 |
| chr5_4 | exon | 27495820 | 27496120 | 27495820 | ID=Msa0846760-mRNA-1:exon:10571;Parent=Msa0846760-mRNA-1 |
| chr5_4 | exon | 27496246 | 27496327 | 27496246 | ID=Msa0846760-mRNA-1:exon:10572;Parent=Msa0846760-mRNA-1 |
| chr5_4 | exon | 27496524 | 27496699 | 27496524 | ID=Msa0846760-mRNA-1:exon:10573;Parent=Msa0846760-mRNA-1 |
| chr5_4 | exon | 27501050 | 27501131 | 27501050 | ID=Msa0846760-mRNA-1:exon:10574;Parent=Msa0846760-mRNA-1 |
| chr5_4 | exon | 27501389 | 27501697 | 27501389 | ID=Msa0846760-mRNA-1:exon:10575;Parent=Msa0846760-mRNA-1 |
| chr5_4 | five_prime_UTR | 27494378 | 27494414 | 27494378 | ID=Msa0846760-mRNA-1:five_prime_utr;Parent=Msa0846760-mRNA-1 |
| chr5_4 | CDS | 27494415 | 27494440 | 27494415 | ID=Msa0846760-mRNA-1:cds;Parent=Msa0846760-mRNA-1 |
| chr5_4 | CDS | 27494985 | 27495076 | 27494985 | ID=Msa0846760-mRNA-1:cds;Parent=Msa0846760-mRNA-1 |
| chr5_4 | CDS | 27495467 | 27495709 | 27495467 | ID=Msa0846760-mRNA-1:cds;Parent=Msa0846760-mRNA-1 |
| chr5_4 | CDS | 27495820 | 27496120 | 27495820 | ID=Msa0846760-mRNA-1:cds;Parent=Msa0846760-mRNA-1 |
| chr5_4 | CDS | 27496246 | 27496327 | 27496246 | ID=Msa0846760-mRNA-1:cds;Parent=Msa0846760-mRNA-1 |
| chr5_4 | CDS | 27496524 | 27496699 | 27496524 | ID=Msa0846760-mRNA-1:cds;Parent=Msa0846760-mRNA-1 |
| chr5_4 | CDS | 27501050 | 27501131 | 27501050 | ID=Msa0846760-mRNA-1:cds;Parent=Msa0846760-mRNA-1 |
| chr5_4 | CDS | 27501389 | 27501697 | 27501389 | ID=Msa0846760-mRNA-1:cds;Parent=Msa0846760-mRNA-1 |
| Gene Sequence |
| Protein sequence |
