Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0853600 | XP_003615686.1 | 77.391 | 575 | 33 | 4 | 1 | 478 | 1 | 575 | 0.0 | 872 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0853600 | sp|Q39033|PLCD2_ARATH | 46.379 | 580 | 188 | 9 | 17 | 475 | 3 | 580 | 1.80e-165 | 482 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0853600 | G7JZH5 | 77.391 | 575 | 33 | 4 | 1 | 478 | 1 | 575 | 0.0 | 872 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0734260 | Msa0853600 | 0.848260 | 6.862977e-60 | -8.615850e-47 |
| Msa0853600 | Msa1284120 | 0.805272 | 1.446161e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0853600 | MtrunA17_Chr5g0430191 | 77.391 | 575 | 33 | 4 | 1 | 478 | 1 | 575 | 0.0 | 872 |
| Msa0853600 | MtrunA17_Chr5g0437081 | 44.143 | 589 | 196 | 9 | 17 | 475 | 3 | 588 | 4.03e-164 | 476 |
| Msa0853600 | MtrunA17_Chr5g0430181 | 45.854 | 591 | 184 | 13 | 20 | 475 | 4 | 593 | 3.14e-160 | 466 |
| Msa0853600 | MtrunA17_Chr3g0113531 | 44.670 | 591 | 198 | 9 | 13 | 475 | 3 | 592 | 5.22e-156 | 456 |
| Msa0853600 | MtrunA17_Chr3g0112551 | 44.133 | 571 | 197 | 9 | 26 | 475 | 2 | 571 | 1.75e-148 | 436 |
| Msa0853600 | MtrunA17_Chr5g0437061 | 46.450 | 493 | 161 | 8 | 86 | 476 | 1 | 492 | 1.41e-139 | 410 |
| Msa0853600 | MtrunA17_Chr3g0113521 | 46.169 | 509 | 177 | 12 | 54 | 475 | 88 | 586 | 1.86e-137 | 408 |
| Msa0853600 | MtrunA17_Chr3g0113471 | 42.334 | 574 | 199 | 14 | 31 | 475 | 17 | 587 | 2.39e-135 | 403 |
| Msa0853600 | MtrunA17_Chr5g0437041 | 39.531 | 597 | 219 | 12 | 20 | 475 | 11 | 606 | 2.04e-130 | 390 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0853600 | AT3G08510.4 | 48.370 | 552 | 189 | 8 | 17 | 475 | 3 | 551 | 1.50e-171 | 494 |
| Msa0853600 | AT3G08510.3 | 48.370 | 552 | 189 | 8 | 17 | 475 | 3 | 551 | 1.50e-171 | 494 |
| Msa0853600 | AT3G08510.2 | 46.379 | 580 | 188 | 9 | 17 | 475 | 3 | 580 | 1.83e-166 | 482 |
| Msa0853600 | AT3G08510.1 | 46.379 | 580 | 188 | 9 | 17 | 475 | 3 | 580 | 1.83e-166 | 482 |
| Msa0853600 | AT5G58670.1 | 47.756 | 557 | 191 | 10 | 16 | 473 | 1 | 556 | 1.97e-162 | 471 |
| Msa0853600 | AT3G55940.1 | 45.111 | 583 | 194 | 9 | 17 | 475 | 3 | 583 | 6.16e-161 | 468 |
| Msa0853600 | AT4G38530.1 | 45.520 | 558 | 201 | 9 | 16 | 473 | 1 | 555 | 3.99e-156 | 455 |
| Msa0853600 | AT2G40116.1 | 47.573 | 515 | 177 | 11 | 46 | 475 | 106 | 612 | 1.40e-145 | 430 |
| Msa0853600 | AT5G58700.3 | 42.542 | 590 | 202 | 13 | 20 | 475 | 10 | 596 | 6.91e-145 | 427 |
| Msa0853600 | AT5G58700.1 | 42.542 | 590 | 202 | 13 | 20 | 475 | 10 | 596 | 6.91e-145 | 427 |
| Msa0853600 | AT5G58700.2 | 48.148 | 486 | 159 | 9 | 82 | 475 | 4 | 488 | 3.01e-143 | 420 |
| Msa0853600 | AT5G58690.2 | 44.289 | 499 | 194 | 9 | 53 | 475 | 68 | 558 | 1.78e-132 | 395 |
| Msa0853600 | AT5G58690.3 | 40.559 | 572 | 222 | 11 | 20 | 475 | 8 | 577 | 4.03e-132 | 394 |
| Msa0853600 | AT5G58690.1 | 40.559 | 572 | 222 | 11 | 20 | 475 | 8 | 577 | 4.03e-132 | 394 |
| Msa0853600 | AT3G47290.1 | 36.425 | 442 | 221 | 7 | 82 | 476 | 103 | 531 | 8.80e-88 | 278 |
| Msa0853600 | AT3G47220.1 | 37.698 | 443 | 210 | 10 | 83 | 476 | 106 | 531 | 3.76e-86 | 274 |
| Msa0853600 | AT3G47290.2 | 36.136 | 440 | 221 | 7 | 82 | 474 | 103 | 529 | 1.21e-83 | 269 |
Find 100 sgRNAs with CRISPR-Local
Find 414 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACAACAATGGCAACAAAATT+TGG | 0.148822 | 5_4:+45489434 | None:intergenic |
| TTCATTTGATGTGAATAATT+TGG | 0.150823 | 5_4:-45491151 | None:intergenic |
| CTTCTTCCTCTTGTATCTTT+TGG | 0.161223 | 5_4:-45491252 | None:intergenic |
| TGCAATTAATTAGGATGAAT+TGG | 0.230610 | 5_4:+45491592 | Msa0853600:intron |
| TGGGCATTATCTTCAATTTA+TGG | 0.241301 | 5_4:+45492759 | Msa0853600:CDS |
| AGTGATTAGAAAATCGAAAT+TGG | 0.251999 | 5_4:-45495238 | None:intergenic |
| AAAATATTGTTGATTTCTTC+TGG | 0.260165 | 5_4:-45489551 | None:intergenic |
| TCCATTCATAGGATCATAAT+TGG | 0.264986 | 5_4:-45492181 | None:intergenic |
| CAATGTTCTACACTACCTTT+TGG | 0.288622 | 5_4:-45491683 | None:intergenic |
| GCCAATTCTGGATAAGTTAA+TGG | 0.289150 | 5_4:-45495059 | None:intergenic |
| AATATCATTCCCATGAGTTT+TGG | 0.294974 | 5_4:-45491768 | None:intergenic |
| GTGAACTTTATAAGCATGTT+AGG | 0.306118 | 5_4:+45495207 | Msa0853600:CDS |
| TCCATTAACTTATCCAGAAT+TGG | 0.320745 | 5_4:+45495058 | Msa0853600:CDS |
| GAGATTGTTTGAATGCCATT+AGG | 0.322747 | 5_4:+45490924 | Msa0853600:CDS |
| ATGTGTAAGAGGGCCAATTC+TGG | 0.338302 | 5_4:-45495071 | None:intergenic |
| GGGCACAACTCCTACTTAAC+TGG | 0.341408 | 5_4:+45490435 | Msa0853600:CDS |
| TTTAACTCCTCATTCCAAAC+TGG | 0.342152 | 5_4:-45495032 | None:intergenic |
| TCTTCAAAAGTTATTATAAC+AGG | 0.350189 | 5_4:-45490974 | None:intergenic |
| ATATTCTAAGCAAATTCCTT+TGG | 0.356443 | 5_4:-45492131 | None:intergenic |
| AGATTGTTTGAATGCCATTA+GGG | 0.371595 | 5_4:+45490925 | Msa0853600:CDS |
| GTTGAAGAGGTGGAGTTATA+TGG | 0.372195 | 5_4:-45490997 | None:intergenic |
| GCAATTAATTAGGATGAATT+GGG | 0.377967 | 5_4:+45491593 | Msa0853600:intron |
| TATTCTAAGCAAATTCCTTT+GGG | 0.392694 | 5_4:-45492130 | None:intergenic |
| TTCCTTGGTCCTAGTTACTT+TGG | 0.400047 | 5_4:-45494997 | None:intergenic |
| AAGATGAGTGGGTCCCAGTT+TGG | 0.404309 | 5_4:+45495018 | Msa0853600:CDS |
| CCTTCTCTTAGCTCTGATAC+AGG | 0.409379 | 5_4:-45495152 | None:intergenic |
| CATTTGTAATTGTATTATGA+AGG | 0.409411 | 5_4:+45495268 | Msa0853600:three_prime_UTR |
| CAATAACTTTAATGTGTAAG+AGG | 0.410043 | 5_4:-45495082 | None:intergenic |
| TTCTTTGGTCGGTATACTCT+AGG | 0.420475 | 5_4:-45492862 | None:intergenic |
| CCCTTCAACGATTCTGGTGA+AGG | 0.423001 | 5_4:-45491181 | None:intergenic |
| ATCAAATGCATTGTCCCTAA+TGG | 0.423947 | 5_4:-45490939 | None:intergenic |
| TCCAATTATGATCCTATGAA+TGG | 0.426154 | 5_4:+45492180 | Msa0853600:CDS |
| CCATGCATCCATCCATTCAT+AGG | 0.428096 | 5_4:-45492192 | None:intergenic |
| GCTTATAAAGTTCACCTTTG+CGG | 0.428659 | 5_4:-45495199 | None:intergenic |
| CAATTGATTTCCAGTTAAGT+AGG | 0.432841 | 5_4:-45490445 | None:intergenic |
| CCGACCAAAGAAAACTCTTC+AGG | 0.446765 | 5_4:+45492873 | Msa0853600:CDS |
| AATTTGATTTCTATACATGC+TGG | 0.454192 | 5_4:+45491656 | Msa0853600:CDS |
| ACTTTGGTGACTGTATCAAC+TGG | 0.457857 | 5_4:-45494981 | None:intergenic |
| TGATGGAACATGATCAAGTT+AGG | 0.457893 | 5_4:+45491708 | Msa0853600:CDS |
| TTATTGTTCAATAAGATGTC+AGG | 0.460630 | 5_4:-45492826 | None:intergenic |
| GAATCCACACGTGAACCCTT+TGG | 0.470657 | 5_4:-45492156 | None:intergenic |
| AATGGTAGCATTTAATATGC+AGG | 0.472930 | 5_4:+45492221 | Msa0853600:CDS |
| CAATAGAATGTTTAAGCTCA+AGG | 0.474052 | 5_4:+45489517 | Msa0853600:CDS |
| CCCTTCACCAGAATCGTTGA+AGG | 0.478338 | 5_4:+45491180 | Msa0853600:CDS |
| CTCATGGGAATGATATTGTC+AGG | 0.481646 | 5_4:+45491774 | Msa0853600:CDS |
| GAGGAGGAGGATGAGACTCT+TGG | 0.488999 | 5_4:+45491626 | Msa0853600:CDS |
| GAAGAAATCGCCAAAACTCA+TGG | 0.491346 | 5_4:+45491758 | Msa0853600:CDS |
| TTCAAAGCCAATGGTGGATG+TGG | 0.497499 | 5_4:+45492790 | Msa0853600:CDS |
| TAGTGTAGAACATTGGTTGA+TGG | 0.502502 | 5_4:+45491691 | Msa0853600:CDS |
| ATGGTGGATGATATATTTAG+AGG | 0.505987 | 5_4:+45491115 | Msa0853600:CDS |
| AACATACCCACATCCACCAT+TGG | 0.508710 | 5_4:-45492797 | None:intergenic |
| TCAAGATATGAATGCTCCAT+TGG | 0.508763 | 5_4:+45490392 | Msa0853600:CDS |
| ATTATGCAGGTTGGTATCCA+TGG | 0.514838 | 5_4:+45494954 | Msa0853600:intron |
| TGGGACCCACTCATCTTCCT+TGG | 0.515917 | 5_4:-45495012 | None:intergenic |
| TATTATAACAGGATACTTTG+AGG | 0.519500 | 5_4:-45490963 | None:intergenic |
| GCGACTTTGCGTTGAAGAGG+TGG | 0.519693 | 5_4:-45491007 | None:intergenic |
| CTTTGACTTTCAGGAGACTC+CGG | 0.522060 | 5_4:-45491229 | None:intergenic |
| CATTATCTTCAATTTATGGA+AGG | 0.529543 | 5_4:+45492763 | Msa0853600:CDS |
| TTGCTTAGAATATATCCAAA+GGG | 0.535506 | 5_4:+45492141 | Msa0853600:CDS |
| ATACATGCTGGGAAGCCAAA+AGG | 0.535904 | 5_4:+45491668 | Msa0853600:CDS |
| ATGGATGCATGGAGCTCAAA+TGG | 0.541893 | 5_4:+45492203 | Msa0853600:CDS |
| AATAACTTTAATGTGTAAGA+GGG | 0.554394 | 5_4:-45495081 | None:intergenic |
| ATTTGATTTCTATACATGCT+GGG | 0.559181 | 5_4:+45491657 | Msa0853600:CDS |
| TCTGATTTCAACAAAACCAC+CGG | 0.570063 | 5_4:+45491210 | Msa0853600:CDS |
| CCTTCAACGATTCTGGTGAA+GGG | 0.570918 | 5_4:-45491180 | None:intergenic |
| CATGCTTTAGATTCACCCAA+AGG | 0.572447 | 5_4:+45492115 | Msa0853600:intron |
| TTTAATCGATTTGTTCCTAG+AGG | 0.572525 | 5_4:-45489468 | None:intergenic |
| GGGTGATGAAAGTGAGGAGG+AGG | 0.575323 | 5_4:+45491613 | Msa0853600:CDS |
| TTTGCTTAGAATATATCCAA+AGG | 0.575916 | 5_4:+45492140 | Msa0853600:CDS |
| AAGAAATCGCCAAAACTCAT+GGG | 0.576013 | 5_4:+45491759 | Msa0853600:CDS |
| TTGGCGACTTTGCGTTGAAG+AGG | 0.577736 | 5_4:-45491010 | None:intergenic |
| TTAACTCCTCATTCCAAACT+GGG | 0.583535 | 5_4:-45495031 | None:intergenic |
| ATTATGATCCTATGAATGGA+TGG | 0.583921 | 5_4:+45492184 | Msa0853600:CDS |
| CCTTCACCAGAATCGTTGAA+GGG | 0.585970 | 5_4:+45491181 | Msa0853600:CDS |
| ATTCATAGGATCATAATTGG+AGG | 0.587604 | 5_4:-45492178 | None:intergenic |
| GTGGGTCCCAGTTTGGAATG+AGG | 0.590724 | 5_4:+45495025 | Msa0853600:CDS |
| CACCAAAGTAACTAGGACCA+AGG | 0.591110 | 5_4:+45494995 | Msa0853600:CDS |
| CAAAAGGTAGTGTAGAACAT+TGG | 0.592726 | 5_4:+45491684 | Msa0853600:CDS |
| TCAAAGCCAAAAGATACAAG+AGG | 0.594050 | 5_4:+45491246 | Msa0853600:CDS |
| GAAGGAATGTTCAAAGCCAA+TGG | 0.594868 | 5_4:+45492781 | Msa0853600:CDS |
| AAAGTAGTACAATTCATCCA+TGG | 0.596287 | 5_4:-45489603 | None:intergenic |
| TGACTGAGGTACATAGAAAG+AGG | 0.597694 | 5_4:+45495372 | Msa0853600:three_prime_UTR |
| ATACAGTCACCAAAGTAACT+AGG | 0.599754 | 5_4:+45494988 | Msa0853600:CDS |
| CCTATGAATGGATGGATGCA+TGG | 0.600723 | 5_4:+45492192 | Msa0853600:CDS |
| ATATTGTTGATTTCTTCTGG+TGG | 0.604922 | 5_4:-45489548 | None:intergenic |
| GTACAATTCATCCATGGTCA+TGG | 0.605855 | 5_4:-45489597 | None:intergenic |
| CCTGTATCAGAGCTAAGAGA+AGG | 0.616213 | 5_4:+45495152 | Msa0853600:CDS |
| TAGGACCAAGGAAGATGAGT+GGG | 0.620046 | 5_4:+45495007 | Msa0853600:CDS |
| CTTCACCAGAATCGTTGAAG+GGG | 0.622267 | 5_4:+45491182 | Msa0853600:CDS |
| ATATCCAAAGGGTTCACGTG+TGG | 0.629079 | 5_4:+45492152 | Msa0853600:CDS |
| TGACTTTCAGGAGACTCCGG+TGG | 0.638079 | 5_4:-45491226 | None:intergenic |
| GGAATGTTCAAAGCCAATGG+TGG | 0.642892 | 5_4:+45492784 | Msa0853600:CDS |
| TGAATTGGGTGATGAAAGTG+AGG | 0.645890 | 5_4:+45491607 | Msa0853600:CDS |
| CTGTATCAACTGGAACACCA+TGG | 0.646258 | 5_4:-45494971 | None:intergenic |
| GTTCGTTTGTGTAACCGCAA+AGG | 0.648872 | 5_4:+45495185 | Msa0853600:CDS |
| TGAACTATCTTTAATGACTG+AGG | 0.653079 | 5_4:+45495358 | Msa0853600:three_prime_UTR |
| CTAGGACCAAGGAAGATGAG+TGG | 0.682226 | 5_4:+45495006 | Msa0853600:CDS |
| TCAAAGCCAATGGTGGATGT+GGG | 0.703468 | 5_4:+45492791 | Msa0853600:CDS |
| ATTGGGTGATGAAAGTGAGG+AGG | 0.710688 | 5_4:+45491610 | Msa0853600:CDS |
| TAGAATGTTTAAGCTCAAGG+TGG | 0.727418 | 5_4:+45489520 | Msa0853600:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATCAACAATATTTTTAAT+AGG | + | chr5_4:45489558-45489577 | Msa0853600:CDS | 10.0% |
| !! | ATATATAATTGTAATTGTTA+AGG | - | chr5_4:45490349-45490368 | None:intergenic | 10.0% |
| !!! | ATATTTGAATTTTTTATTTC+AGG | + | chr5_4:45490365-45490384 | Msa0853600:intron | 10.0% |
| !! | TGAATTTGATAAATAATTTA+GGG | + | chr5_4:45491382-45491401 | Msa0853600:intron | 10.0% |
| !!! | CTTTTTAATTTAAAAAACAA+AGG | + | chr5_4:45491475-45491494 | Msa0853600:intron | 10.0% |
| !!! | AATATTTTTTGCAATTAATT+AGG | + | chr5_4:45491583-45491602 | Msa0853600:intron | 10.0% |
| !! | TTAAATATAAGAAGTAAATT+AGG | + | chr5_4:45492382-45492401 | Msa0853600:intron | 10.0% |
| !! | CCAAATTTATAAATAAATAA+AGG | - | chr5_4:45492602-45492621 | None:intergenic | 10.0% |
| !!! | CCTTTATTTATTTATAAATT+TGG | + | chr5_4:45492599-45492618 | Msa0853600:intron | 10.0% |
| !!! | ATTAATTTTGTTTTACTTAA+AGG | + | chr5_4:45492732-45492751 | Msa0853600:intron | 10.0% |
| !!! | TTAATTTTGTTTTACTTAAA+GGG | + | chr5_4:45492733-45492752 | Msa0853600:intron | 10.0% |
| !!! | TTTTTTATATTAGATATACT+TGG | - | chr5_4:45492981-45493000 | None:intergenic | 10.0% |
| !!! | TATTATATTTCCTATTTTTA+AGG | - | chr5_4:45493329-45493348 | None:intergenic | 10.0% |
| !! | TTAAAAATAGGAAATATAAT+AGG | + | chr5_4:45493328-45493347 | Msa0853600:intron | 10.0% |
| !!! | TAAATATTTGAAATAATTTG+TGG | - | chr5_4:45493712-45493731 | None:intergenic | 10.0% |
| !! | TCAAATACTACAAATTTAAT+CGG | + | chr5_4:45490065-45490084 | Msa0853600:intron | 15.0% |
| !!! | AAAAGATATATGTATGTTTT+TGG | - | chr5_4:45490313-45490332 | None:intergenic | 15.0% |
| !!! | AAAAACATACATATATCTTT+TGG | + | chr5_4:45490312-45490331 | Msa0853600:intron | 15.0% |
| !! | TATTTAAAAATCGCATAATT+TGG | - | chr5_4:45490703-45490722 | None:intergenic | 15.0% |
| !! | ATTAATATTTATAATGCAGA+TGG | + | chr5_4:45491096-45491115 | Msa0853600:intron | 15.0% |
| !! | GTGAATTTGATAAATAATTT+AGG | + | chr5_4:45491381-45491400 | Msa0853600:intron | 15.0% |
| !!! | ATTTTGAAGTACATATTTAT+AGG | - | chr5_4:45491452-45491471 | None:intergenic | 15.0% |
| !!! | AAAAAAAAAAGTGTAACAAA+TGG | + | chr5_4:45491514-45491533 | Msa0853600:intron | 15.0% |
| !!! | TCAATTATTTTTAATGTAGT+TGG | + | chr5_4:45491846-45491865 | Msa0853600:intron | 15.0% |
| !! | TGTTTGAATGAAAAAAAAAT+AGG | - | chr5_4:45491904-45491923 | None:intergenic | 15.0% |
| !! | GTAACAATTAATTAACAATA+GGG | - | chr5_4:45492074-45492093 | None:intergenic | 15.0% |
| !! | TGTAACAATTAATTAACAAT+AGG | - | chr5_4:45492075-45492094 | None:intergenic | 15.0% |
| !!! | ATTATGAAAATAGTTTTCTT+AGG | - | chr5_4:45492491-45492510 | None:intergenic | 15.0% |
| !! | ATAGAAATAAATAAAGTTTG+AGG | + | chr5_4:45492624-45492643 | Msa0853600:intron | 15.0% |
| !!! | TCCATTTCTTATTTATTAAT+TGG | + | chr5_4:45492698-45492717 | Msa0853600:intron | 15.0% |
| !!! | TAATTTTGTTTTACTTAAAG+GGG | + | chr5_4:45492734-45492753 | Msa0853600:intron | 15.0% |
| !!! | GATTTATTTAAGATTATTCA+CGG | + | chr5_4:45493157-45493176 | Msa0853600:intron | 15.0% |
| !! | GTATTTAAAAAAAAGATGTT+TGG | + | chr5_4:45493279-45493298 | Msa0853600:intron | 15.0% |
| !! | GTTAACATTATAATATTTCA+AGG | + | chr5_4:45493301-45493320 | Msa0853600:intron | 15.0% |
| !!! | AAAATATTGTTGATTTCTTC+TGG | - | chr5_4:45489554-45489573 | None:intergenic | 20.0% |
| !! | TTTAATAGGTATGCAAAAAA+TGG | + | chr5_4:45489572-45489591 | Msa0853600:CDS | 20.0% |
| !!! | TACTTTTTAGTTGATTTTCA+AGG | + | chr5_4:45489620-45489639 | Msa0853600:CDS | 20.0% |
| !!! | TGATTTTCTCAAATTATTAG+CGG | - | chr5_4:45489877-45489896 | None:intergenic | 20.0% |
| !! | ACATAATTCAGTGTAATTAT+AGG | + | chr5_4:45489896-45489915 | Msa0853600:intron | 20.0% |
| !!! | TTTTCAGAGCTTTTATTATT+GGG | - | chr5_4:45490491-45490510 | None:intergenic | 20.0% |
| !!! | TTTTTCAGAGCTTTTATTAT+TGG | - | chr5_4:45490492-45490511 | None:intergenic | 20.0% |
| !!! | ATAATAAAAGCTCTGAAAAA+AGG | + | chr5_4:45490492-45490511 | Msa0853600:CDS | 20.0% |
| !! | TTATATATAAAGCTGAAAGT+TGG | - | chr5_4:45490846-45490865 | None:intergenic | 20.0% |
| !! | TCTTCAAAAGTTATTATAAC+AGG | - | chr5_4:45490977-45490996 | None:intergenic | 20.0% |
| !! | TGCAAAAAATTTACAAACTT+TGG | - | chr5_4:45491032-45491051 | None:intergenic | 20.0% |
| !!! | TTTTAGACTATGATATATAG+TGG | - | chr5_4:45491064-45491083 | None:intergenic | 20.0% |
| !! | TTCATTTGATGTGAATAATT+TGG | - | chr5_4:45491154-45491173 | None:intergenic | 20.0% |
| !!! | ATTTAATTTCACTTTGCTTA+TGG | + | chr5_4:45491331-45491350 | Msa0853600:intron | 20.0% |
| !!! | TTTAATTTCACTTTGCTTAT+GGG | + | chr5_4:45491332-45491351 | Msa0853600:intron | 20.0% |
| !! | AGTACATATTTATAGGAAAA+TGG | - | chr5_4:45491445-45491464 | None:intergenic | 20.0% |
| !!! | AGTTGATTCAAGATATATAT+AGG | - | chr5_4:45491541-45491560 | None:intergenic | 20.0% |
| !! | TATATATATCTTGAATCAAC+TGG | + | chr5_4:45491540-45491559 | Msa0853600:intron | 20.0% |
| !! | ATATATATCTTGAATCAACT+GGG | + | chr5_4:45491541-45491560 | Msa0853600:intron | 20.0% |
| !! | TTATACTTCAATACTTGTAT+AGG | + | chr5_4:45491948-45491967 | Msa0853600:intron | 20.0% |
| !! | TATACTTCAATACTTGTATA+GGG | + | chr5_4:45491949-45491968 | Msa0853600:intron | 20.0% |
| !!! | GTTTTATAATAACTTCCAAA+AGG | + | chr5_4:45492348-45492367 | Msa0853600:intron | 20.0% |
| !!! | TTAATTATAAGTTGACCTTT+TGG | - | chr5_4:45492366-45492385 | None:intergenic | 20.0% |
| !!! | ACTATTTTCATAATCACATA+TGG | + | chr5_4:45492497-45492516 | Msa0853600:intron | 20.0% |
| !! | ATAAATAAATAAAGGAAAGC+AGG | - | chr5_4:45492594-45492613 | None:intergenic | 20.0% |
| !! | GCCAATTAATAAATAAGAAA+TGG | - | chr5_4:45492702-45492721 | None:intergenic | 20.0% |
| !! | AATAAAAATCAAAGTGTGTT+TGG | - | chr5_4:45493063-45493082 | None:intergenic | 20.0% |
| !!! | ATTATACTTTTGATTGTGAT+TGG | + | chr5_4:45493109-45493128 | Msa0853600:intron | 20.0% |
| !!! | AAGATATGAATTTTATTCCA+AGG | + | chr5_4:45493257-45493276 | Msa0853600:intron | 20.0% |
| !!! | CATCTTTTTTTTAAATACCT+TGG | - | chr5_4:45493277-45493296 | None:intergenic | 20.0% |
| !!! | AGTTTACTAAATTTTATTCC+CGG | - | chr5_4:45493447-45493466 | None:intergenic | 20.0% |
| !!! | CATTTTTATGATTTTATTCC+CGG | + | chr5_4:45493488-45493507 | Msa0853600:intron | 20.0% |
| !!! | ATTTTTATGATTTTATTCCC+GGG | + | chr5_4:45493489-45493508 | Msa0853600:intron | 20.0% |
| !! | AATGACACATTGATATAATT+AGG | + | chr5_4:45493814-45493833 | Msa0853600:intron | 20.0% |
| !! | ATGACACATTGATATAATTA+GGG | + | chr5_4:45493815-45493834 | Msa0853600:intron | 20.0% |
| !!! | GAAAGTATGTTTAGTTAAAT+AGG | + | chr5_4:45493946-45493965 | Msa0853600:intron | 20.0% |
| !! | ATAAATAGATATTAATAGGC+CGG | - | chr5_4:45494013-45494032 | None:intergenic | 20.0% |
| !!! | TTAACATGTTTTGTTGATAT+AGG | + | chr5_4:45494108-45494127 | Msa0853600:intron | 20.0% |
| !! | AAATTTACTTGTAGTGAAAT+AGG | + | chr5_4:45494157-45494176 | Msa0853600:intron | 20.0% |
| !! | ATATCTACCATAAGTAAATA+CGG | - | chr5_4:45494591-45494610 | None:intergenic | 20.0% |
| !!! | ACAAATAGTACATTTTAGTT+CGG | + | chr5_4:45494869-45494888 | Msa0853600:intron | 20.0% |
| !! | AATAACTTTAATGTGTAAGA+GGG | - | chr5_4:45495084-45495103 | None:intergenic | 20.0% |
| !! | CATTTGTAATTGTATTATGA+AGG | + | chr5_4:45495268-45495287 | Msa0853600:three_prime_UTR | 20.0% |
| ! | TATTGAAACAAAAACAGACT+TGG | - | chr5_4:45489502-45489521 | None:intergenic | 25.0% |
| !!! | CCTCTTCTTTGAAATATATT+GGG | - | chr5_4:45489707-45489726 | None:intergenic | 25.0% |
| !!! | ACCTCTTCTTTGAAATATAT+TGG | - | chr5_4:45489708-45489727 | None:intergenic | 25.0% |
| ! | CATAGATAATAAGGATAAAC+TGG | - | chr5_4:45489806-45489825 | None:intergenic | 25.0% |
| ! | TGATAATAAGTTATGAAGCA+CGG | - | chr5_4:45489996-45490015 | None:intergenic | 25.0% |
| !! | CCTAACTTTTGCTTATAAAT+AGG | - | chr5_4:45490173-45490192 | None:intergenic | 25.0% |
| ! | CCTATTTATAAGCAAAAGTT+AGG | + | chr5_4:45490170-45490189 | Msa0853600:intron | 25.0% |
| ! | TCAACAAAAATTGATGTATC+TGG | - | chr5_4:45490232-45490251 | None:intergenic | 25.0% |
| ! | CTCAAGTTTCTCTTATAAAT+AGG | + | chr5_4:45490252-45490271 | Msa0853600:intron | 25.0% |
| ! | TGTAATTGTTAAGGATTTAG+TGG | - | chr5_4:45490340-45490359 | None:intergenic | 25.0% |
| ! | TACAAAAAATAATGAGCCAA+TGG | - | chr5_4:45490411-45490430 | None:intergenic | 25.0% |
| !!! | CTCATTATTTTTTGTACACA+GGG | + | chr5_4:45490415-45490434 | Msa0853600:CDS | 25.0% |
| !! | TTTGGTGTAATTATATGTGT+TGG | - | chr5_4:45490685-45490704 | None:intergenic | 25.0% |
| ! | TATTATAACAGGATACTTTG+AGG | - | chr5_4:45490966-45490985 | None:intergenic | 25.0% |
| ! | AATATTTATAATGCAGATGG+TGG | + | chr5_4:45491099-45491118 | Msa0853600:intron | 25.0% |
| ! | TATATATCTTGAATCAACTG+GGG | + | chr5_4:45491542-45491561 | Msa0853600:intron | 25.0% |
| ! | TGCAATTAATTAGGATGAAT+TGG | + | chr5_4:45491592-45491611 | Msa0853600:intron | 25.0% |
| ! | GCAATTAATTAGGATGAATT+GGG | + | chr5_4:45491593-45491612 | Msa0853600:intron | 25.0% |
| !! | AATTTGATTTCTATACATGC+TGG | + | chr5_4:45491656-45491675 | Msa0853600:CDS | 25.0% |
| !! | ATTTGATTTCTATACATGCT+GGG | + | chr5_4:45491657-45491676 | Msa0853600:CDS | 25.0% |
| !! | CAAAATTTGCTTACCATATT+TGG | + | chr5_4:45492007-45492026 | Msa0853600:intron | 25.0% |
| ! | ATAGTAAAAGTAGCCAAATA+TGG | - | chr5_4:45492023-45492042 | None:intergenic | 25.0% |
| ! | TATTCTAAGCAAATTCCTTT+GGG | - | chr5_4:45492133-45492152 | None:intergenic | 25.0% |
| ! | ATATTCTAAGCAAATTCCTT+TGG | - | chr5_4:45492134-45492153 | None:intergenic | 25.0% |
| ! | TTTGCTTAGAATATATCCAA+AGG | + | chr5_4:45492140-45492159 | Msa0853600:CDS | 25.0% |
| ! | TTGCTTAGAATATATCCAAA+GGG | + | chr5_4:45492141-45492160 | Msa0853600:CDS | 25.0% |
| ! | TCTCTCAATTGTCAAATAAA+TGG | - | chr5_4:45492261-45492280 | None:intergenic | 25.0% |
| !!! | CATGTTACATTCTTAGTTTT+AGG | - | chr5_4:45492426-45492445 | None:intergenic | 25.0% |
| ! | CATTATCTTCAATTTATGGA+AGG | + | chr5_4:45492763-45492782 | Msa0853600:CDS | 25.0% |
| ! | TTATTGTTCAATAAGATGTC+AGG | - | chr5_4:45492829-45492848 | None:intergenic | 25.0% |
| ! | CTTCAGTATATAAAGTAAGA+TGG | - | chr5_4:45492958-45492977 | None:intergenic | 25.0% |
| ! | ATTGTGATTGGAATGATTTA+AGG | + | chr5_4:45493121-45493140 | Msa0853600:intron | 25.0% |
| ! | TTAAGATTATTCACGGATTT+AGG | + | chr5_4:45493164-45493183 | Msa0853600:intron | 25.0% |
| !! | AGTGTAGCAAATTTATTTCT+AGG | + | chr5_4:45493213-45493232 | Msa0853600:intron | 25.0% |
| !! | TTTCTAGGAATAACATTTCT+TGG | + | chr5_4:45493228-45493247 | Msa0853600:intron | 25.0% |
| ! | TTTCAAGGAACCTTAAAAAT+AGG | + | chr5_4:45493316-45493335 | Msa0853600:intron | 25.0% |
| !! | GTTTACTAAATTTTATTCCC+GGG | - | chr5_4:45493446-45493465 | None:intergenic | 25.0% |
| ! | AAGTTATATTTGTAGATTCC+CGG | - | chr5_4:45493510-45493529 | None:intergenic | 25.0% |
| !!! | AAGCTCTAAGATATTTTCAT+AGG | - | chr5_4:45493592-45493611 | None:intergenic | 25.0% |
| !! | TTGAAATAATTTGTGGTGTT+TGG | - | chr5_4:45493705-45493724 | None:intergenic | 25.0% |
| ! | ACATTGATATAATTAGGGTT+GGG | + | chr5_4:45493820-45493839 | Msa0853600:intron | 25.0% |
| ! | TATGTTTAGTTAAATAGGTC+AGG | + | chr5_4:45493951-45493970 | Msa0853600:intron | 25.0% |
| ! | TGACTAATAGATAGAGAAAA+AGG | - | chr5_4:45494087-45494106 | None:intergenic | 25.0% |
| ! | AGGCTTGTAAAAAAATATGT+AGG | + | chr5_4:45494350-45494369 | Msa0853600:intron | 25.0% |
| ! | ACTTAAAAGAAACAAGTGTA+GGG | - | chr5_4:45494457-45494476 | None:intergenic | 25.0% |
| ! | TACTTAAAAGAAACAAGTGT+AGG | - | chr5_4:45494458-45494477 | None:intergenic | 25.0% |
| !! | TCTAAAACCGTATTTACTTA+TGG | + | chr5_4:45494581-45494600 | Msa0853600:intron | 25.0% |
| !!! | TTTGATTTTTCCACAATTCA+TGG | - | chr5_4:45494730-45494749 | None:intergenic | 25.0% |
| !! | GGAAAAATCAAAGTTTTCAT+TGG | + | chr5_4:45494738-45494757 | Msa0853600:intron | 25.0% |
| ! | ATATTGACACGTTATAATTG+AGG | - | chr5_4:45494936-45494955 | None:intergenic | 25.0% |
| ! | CAATAACTTTAATGTGTAAG+AGG | - | chr5_4:45495085-45495104 | None:intergenic | 25.0% |
| ! | AGTGATTAGAAAATCGAAAT+TGG | - | chr5_4:45495241-45495260 | None:intergenic | 25.0% |
| !!! | TTGGTTTTAGTAAAACCTCT+AGG | + | chr5_4:45489453-45489472 | Msa0853600:CDS | 30.0% |
| !! | TTTAATCGATTTGTTCCTAG+AGG | - | chr5_4:45489471-45489490 | None:intergenic | 30.0% |
| CAATAGAATGTTTAAGCTCA+AGG | + | chr5_4:45489517-45489536 | Msa0853600:CDS | 30.0% | |
| !! | ATATTGTTGATTTCTTCTGG+TGG | - | chr5_4:45489551-45489570 | None:intergenic | 30.0% |
| AAAGTAGTACAATTCATCCA+TGG | - | chr5_4:45489606-45489625 | None:intergenic | 30.0% | |
| !! | AGTTGATTTTCAAGGAGAAA+AGG | + | chr5_4:45489628-45489647 | Msa0853600:CDS | 30.0% |
| !! | GTTGATTTTCAAGGAGAAAA+GGG | + | chr5_4:45489629-45489648 | Msa0853600:CDS | 30.0% |
| ! | AACATCTTGAGCATGTTTTT+GGG | - | chr5_4:45489666-45489685 | None:intergenic | 30.0% |
| ! | AAACATCTTGAGCATGTTTT+TGG | - | chr5_4:45489667-45489686 | None:intergenic | 30.0% |
| !! | TATTGGGATGTTTTAAACTG+TGG | - | chr5_4:45489691-45489710 | None:intergenic | 30.0% |
| CCCAATATATTTCAAAGAAG+AGG | + | chr5_4:45489704-45489723 | Msa0853600:intron | 30.0% | |
| AAATTTACCTGATCACCTAT+GGG | - | chr5_4:45489779-45489798 | None:intergenic | 30.0% | |
| AAAATTTACCTGATCACCTA+TGG | - | chr5_4:45489780-45489799 | None:intergenic | 30.0% | |
| TCCTTATTATCTATGAAGCA+CGG | + | chr5_4:45489811-45489830 | Msa0853600:intron | 30.0% | |
| TTCAGTGTAATTATAGGTGA+CGG | + | chr5_4:45489902-45489921 | Msa0853600:intron | 30.0% | |
| ! | CTTTTGCTTATAAATAGGAC+TGG | - | chr5_4:45490168-45490187 | None:intergenic | 30.0% |
| !!! | TGTATGTTTTTGGCTCTATT+TGG | - | chr5_4:45490303-45490322 | None:intergenic | 30.0% |
| !!! | GCTCATTATTTTTTGTACAC+AGG | + | chr5_4:45490414-45490433 | Msa0853600:CDS | 30.0% |
| ! | CAATTGATTTCCAGTTAAGT+AGG | - | chr5_4:45490448-45490467 | None:intergenic | 30.0% |
| !! | ACATCATCTTCTCTAGAATT+TGG | - | chr5_4:45490546-45490565 | None:intergenic | 30.0% |
| ! | AAATTCTAGAGAAGATGATG+TGG | + | chr5_4:45490545-45490564 | Msa0853600:intron | 30.0% |
| ! | TATGAAGCACGAATACTTTT+CGG | + | chr5_4:45490604-45490623 | Msa0853600:intron | 30.0% |
| TATTGAAAACCTATGAAGCA+CGG | - | chr5_4:45490771-45490790 | None:intergenic | 30.0% | |
| TCAACAATGTGCTACAATAT+TGG | - | chr5_4:45490810-45490829 | None:intergenic | 30.0% | |
| !!! | TTGACTTATTTTTGAGCTGT+AGG | + | chr5_4:45490876-45490895 | Msa0853600:intron | 30.0% |
| AGATTGTTTGAATGCCATTA+GGG | + | chr5_4:45490925-45490944 | Msa0853600:CDS | 30.0% | |
| !! | ATGGTGGATGATATATTTAG+AGG | + | chr5_4:45491115-45491134 | Msa0853600:CDS | 30.0% |
| ! | AATATCATTCCCATGAGTTT+TGG | - | chr5_4:45491771-45491790 | None:intergenic | 30.0% |
| TGATGTAGTGTACTTATACA+AGG | - | chr5_4:45491989-45492008 | None:intergenic | 30.0% | |
| ATTCATAGGATCATAATTGG+AGG | - | chr5_4:45492181-45492200 | None:intergenic | 30.0% | |
| TCCAATTATGATCCTATGAA+TGG | + | chr5_4:45492180-45492199 | Msa0853600:CDS | 30.0% | |
| TCCATTCATAGGATCATAAT+TGG | - | chr5_4:45492184-45492203 | None:intergenic | 30.0% | |
| ATTATGATCCTATGAATGGA+TGG | + | chr5_4:45492184-45492203 | Msa0853600:CDS | 30.0% | |
| AATGGTAGCATTTAATATGC+AGG | + | chr5_4:45492221-45492240 | Msa0853600:CDS | 30.0% | |
| AGGATGCAAGTTGTTATAAT+AGG | - | chr5_4:45492471-45492490 | None:intergenic | 30.0% | |
| !!! | AAAGTTTGAGGATTTTTTGC+AGG | + | chr5_4:45492636-45492655 | Msa0853600:intron | 30.0% |
| TGGGCATTATCTTCAATTTA+TGG | + | chr5_4:45492759-45492778 | Msa0853600:CDS | 30.0% | |
| ! | TTTACCTGAAGAGTTTTCTT+TGG | - | chr5_4:45492880-45492899 | None:intergenic | 30.0% |
| AAAGAAAACTCTTCAGGTAA+AGG | + | chr5_4:45492879-45492898 | Msa0853600:intron | 30.0% | |
| AAGAAAACTCTTCAGGTAAA+GGG | + | chr5_4:45492880-45492899 | Msa0853600:intron | 30.0% | |
| ! | TAATTTTATTCCCATCTCCA+TGG | + | chr5_4:45493361-45493380 | Msa0853600:intron | 30.0% |
| ! | AATTTTATTCCCATCTCCAT+GGG | + | chr5_4:45493362-45493381 | Msa0853600:intron | 30.0% |
| ! | TTTATTCCCACCATTTTCTT+TGG | + | chr5_4:45493388-45493407 | Msa0853600:intron | 30.0% |
| ! | TTATTCCCACCATTTTCTTT+GGG | + | chr5_4:45493389-45493408 | Msa0853600:intron | 30.0% |
| ! | ACAAGTTTTCCCAAAGAAAA+TGG | - | chr5_4:45493401-45493420 | None:intergenic | 30.0% |
| AGTAAACTTGTAACAAACGT+CGG | + | chr5_4:45493459-45493478 | Msa0853600:intron | 30.0% | |
| AGTTATATTTGTAGATTCCC+GGG | - | chr5_4:45493509-45493528 | None:intergenic | 30.0% | |
| ! | TATTTTCATAGGCAATCTTG+AGG | - | chr5_4:45493581-45493600 | None:intergenic | 30.0% |
| CACATTGATATAATTAGGGT+TGG | + | chr5_4:45493819-45493838 | Msa0853600:intron | 30.0% | |
| ATATAATTAGGGTTGGGAAT+AGG | + | chr5_4:45493826-45493845 | Msa0853600:intron | 30.0% | |
| AAAAGTCTGTTAAGCCTAAT+AGG | + | chr5_4:45493987-45494006 | Msa0853600:intron | 30.0% | |
| !! | GTTGATATAGGCTTTTAAGT+AGG | + | chr5_4:45494120-45494139 | Msa0853600:intron | 30.0% |
| !! | AGTGAAATAGGCTTTTAAGT+AGG | + | chr5_4:45494169-45494188 | Msa0853600:intron | 30.0% |
| GTTCATTTGACCTACTAAAT+AGG | - | chr5_4:45494212-45494231 | None:intergenic | 30.0% | |
| ACCTTAATATAAAGTATGCC+TGG | + | chr5_4:45494241-45494260 | Msa0853600:intron | 30.0% | |
| TCCAGGCATACTTTATATTA+AGG | - | chr5_4:45494245-45494264 | None:intergenic | 30.0% | |
| ! | CTTCAATTTTCATGTTTGTG+GGG | - | chr5_4:45494536-45494555 | None:intergenic | 30.0% |
| ! | CCTTCAATTTTCATGTTTGT+GGG | - | chr5_4:45494537-45494556 | None:intergenic | 30.0% |
| CCACAAACATGAAAATTGAA+GGG | + | chr5_4:45494535-45494554 | Msa0853600:intron | 30.0% | |
| AAAAGGAGGAAGTCAAAAAA+GGG | - | chr5_4:45494694-45494713 | None:intergenic | 30.0% | |
| AAAAAGGAGGAAGTCAAAAA+AGG | - | chr5_4:45494695-45494714 | None:intergenic | 30.0% | |
| ! | ATTTTTCCACAATTCATGGT+AGG | - | chr5_4:45494726-45494745 | None:intergenic | 30.0% |
| ATAACGTGTCAATATTATGC+AGG | + | chr5_4:45494941-45494960 | Msa0853600:intron | 30.0% | |
| TCCATTAACTTATCCAGAAT+TGG | + | chr5_4:45495058-45495077 | Msa0853600:CDS | 30.0% | |
| GTGAACTTTATAAGCATGTT+AGG | + | chr5_4:45495207-45495226 | Msa0853600:CDS | 30.0% | |
| TGAACTATCTTTAATGACTG+AGG | + | chr5_4:45495358-45495377 | Msa0853600:three_prime_UTR | 30.0% | |
| TAGAATGTTTAAGCTCAAGG+TGG | + | chr5_4:45489520-45489539 | Msa0853600:CDS | 35.0% | |
| AAAAAATGGTACCATGACCA+TGG | + | chr5_4:45489586-45489605 | Msa0853600:CDS | 35.0% | |
| ACCAAAGAGATAACGAAAGA+AGG | - | chr5_4:45489744-45489763 | None:intergenic | 35.0% | |
| ! | TATCTCTTTGGTGACCTAAA+TGG | + | chr5_4:45489752-45489771 | Msa0853600:intron | 35.0% |
| AATTTACCTGATCACCTATG+GGG | - | chr5_4:45489778-45489797 | None:intergenic | 35.0% | |
| TCCGTGCTTCATAGATAATA+AGG | - | chr5_4:45489815-45489834 | None:intergenic | 35.0% | |
| TGCTTATAAATAGGACTGGA+GGG | - | chr5_4:45490164-45490183 | None:intergenic | 35.0% | |
| TTGCTTATAAATAGGACTGG+AGG | - | chr5_4:45490165-45490184 | None:intergenic | 35.0% | |
| TCTCTTATAAATAGGACCGA+AGG | + | chr5_4:45490260-45490279 | Msa0853600:intron | 35.0% | |
| CTCTTATAAATAGGACCGAA+GGG | + | chr5_4:45490261-45490280 | Msa0853600:intron | 35.0% | |
| GAAAAGTCATATACTCCCTT+CGG | - | chr5_4:45490279-45490298 | None:intergenic | 35.0% | |
| TCAAGATATGAATGCTCCAT+TGG | + | chr5_4:45490392-45490411 | Msa0853600:CDS | 35.0% | |
| AGGAGTTAGAGTAATTGAGT+TGG | + | chr5_4:45490512-45490531 | Msa0853600:intron | 35.0% | |
| !! | GAGTAATTGAGTTGGATTTG+TGG | + | chr5_4:45490520-45490539 | Msa0853600:intron | 35.0% |
| GAGATTGTTTGAATGCCATT+AGG | + | chr5_4:45490924-45490943 | Msa0853600:CDS | 35.0% | |
| ATCAAATGCATTGTCCCTAA+TGG | - | chr5_4:45490942-45490961 | None:intergenic | 35.0% | |
| TCTGATTTCAACAAAACCAC+CGG | + | chr5_4:45491210-45491229 | Msa0853600:CDS | 35.0% | |
| !!! | ATCTTTTGGCTTTGACTTTC+AGG | - | chr5_4:45491241-45491260 | None:intergenic | 35.0% |
| TCAAAGCCAAAAGATACAAG+AGG | + | chr5_4:45491246-45491265 | Msa0853600:CDS | 35.0% | |
| ! | CTTCTTCCTCTTGTATCTTT+TGG | - | chr5_4:45491255-45491274 | None:intergenic | 35.0% |
| ! | CAATGTTCTACACTACCTTT+TGG | - | chr5_4:45491686-45491705 | None:intergenic | 35.0% |
| CAAAAGGTAGTGTAGAACAT+TGG | + | chr5_4:45491684-45491703 | Msa0853600:CDS | 35.0% | |
| ! | TAGTGTAGAACATTGGTTGA+TGG | + | chr5_4:45491691-45491710 | Msa0853600:CDS | 35.0% |
| TGATGGAACATGATCAAGTT+AGG | + | chr5_4:45491708-45491727 | Msa0853600:CDS | 35.0% | |
| AAGAAATCGCCAAAACTCAT+GGG | + | chr5_4:45491759-45491778 | Msa0853600:CDS | 35.0% | |
| GTAGTGTACTTATACAAGGA+TGG | - | chr5_4:45491985-45492004 | None:intergenic | 35.0% | |
| TTGACAATTGAGAGAAGAGA+AGG | + | chr5_4:45492266-45492285 | Msa0853600:intron | 35.0% | |
| TGACAATTGAGAGAAGAGAA+GGG | + | chr5_4:45492267-45492286 | Msa0853600:intron | 35.0% | |
| GAACAATTGCATGGATGAAA+AGG | - | chr5_4:45492551-45492570 | None:intergenic | 35.0% | |
| GTAACATACGAACAATTGCA+TGG | - | chr5_4:45492560-45492579 | None:intergenic | 35.0% | |
| !! | TTGTTTTACTTAAAGGGGCA+TGG | + | chr5_4:45492739-45492758 | Msa0853600:intron | 35.0% |
| !! | TGTTTTACTTAAAGGGGCAT+GGG | + | chr5_4:45492740-45492759 | Msa0853600:intron | 35.0% |
| AAAACAGGTTCACGTATACA+TGG | + | chr5_4:45493012-45493031 | Msa0853600:intron | 35.0% | |
| AAACAGGTTCACGTATACAT+GGG | + | chr5_4:45493013-45493032 | Msa0853600:intron | 35.0% | |
| ATTACCTGTACACGAAAATC+AGG | - | chr5_4:45493091-45493110 | None:intergenic | 35.0% | |
| AATAAAGTTCCCATGGAGAT+GGG | - | chr5_4:45493374-45493393 | None:intergenic | 35.0% | |
| ! | GTTTTCCCAAAGAAAATGGT+GGG | - | chr5_4:45493397-45493416 | None:intergenic | 35.0% |
| ! | AGTTTTCCCAAAGAAAATGG+TGG | - | chr5_4:45493398-45493417 | None:intergenic | 35.0% |
| CTTGAGGAGTTTACGAAAAT+AGG | - | chr5_4:45493565-45493584 | None:intergenic | 35.0% | |
| !! | TTTCTAAAATGCCTAAGCCT+AGG | - | chr5_4:45493930-45493949 | None:intergenic | 35.0% |
| TAGTTAAATAGGTCAGGCTT+AGG | + | chr5_4:45493957-45493976 | Msa0853600:intron | 35.0% | |
| ! | TTAGGCTTAACAGACTTTTC+TGG | - | chr5_4:45493986-45494005 | None:intergenic | 35.0% |
| !! | AGGCTTTTAAGTAGGCTTTA+AGG | + | chr5_4:45494128-45494147 | Msa0853600:intron | 35.0% |
| ACCTACTAAATAGGCTAAAG+AGG | - | chr5_4:45494203-45494222 | None:intergenic | 35.0% | |
| TATAAAGTATGCCTGGAAGT+AGG | + | chr5_4:45494248-45494267 | Msa0853600:intron | 35.0% | |
| ! | GTCAGTCCAGACTTTTAAAT+AGG | + | chr5_4:45494278-45494297 | Msa0853600:intron | 35.0% |
| ! | TCCAGACTTTTAAATAGGTC+AGG | + | chr5_4:45494283-45494302 | Msa0853600:intron | 35.0% |
| ACCTGACCTATTTAAAAGTC+TGG | - | chr5_4:45494287-45494306 | None:intergenic | 35.0% | |
| AAAATATGTAGGTCAGACTC+AGG | + | chr5_4:45494361-45494380 | Msa0853600:intron | 35.0% | |
| AATTATATAGGGGTGGGAAT+AGG | - | chr5_4:45494412-45494431 | None:intergenic | 35.0% | |
| CTTCACAATTATATAGGGGT+GGG | - | chr5_4:45494418-45494437 | None:intergenic | 35.0% | |
| ACTTCACAATTATATAGGGG+TGG | - | chr5_4:45494419-45494438 | None:intergenic | 35.0% | |
| CCCACAAACATGAAAATTGA+AGG | + | chr5_4:45494534-45494553 | Msa0853600:intron | 35.0% | |
| ! | CCCTTCAATTTTCATGTTTG+TGG | - | chr5_4:45494538-45494557 | None:intergenic | 35.0% |
| AAAATGCTAAAGTTTCCGAC+AGG | + | chr5_4:45494628-45494647 | Msa0853600:intron | 35.0% | |
| AAAGGAGGAAGTCAAAAAAG+GGG | - | chr5_4:45494693-45494712 | None:intergenic | 35.0% | |
| ATGGTAGGTCAAATGGAAAA+AGG | - | chr5_4:45494711-45494730 | None:intergenic | 35.0% | |
| ACAATTCATGGTAGGTCAAA+TGG | - | chr5_4:45494718-45494737 | None:intergenic | 35.0% | |
| ATTTGACCTACCATGAATTG+TGG | + | chr5_4:45494717-45494736 | Msa0853600:intron | 35.0% | |
| !! | CTTTTAATTCGTGATGCCTT+CGG | + | chr5_4:45494764-45494783 | Msa0853600:intron | 35.0% |
| !! | TTTTAATTCGTGATGCCTTC+GGG | + | chr5_4:45494765-45494784 | Msa0853600:intron | 35.0% |
| ATACAGTCACCAAAGTAACT+AGG | + | chr5_4:45494988-45495007 | Msa0853600:CDS | 35.0% | |
| TTAACTCCTCATTCCAAACT+GGG | - | chr5_4:45495034-45495053 | None:intergenic | 35.0% | |
| TTTAACTCCTCATTCCAAAC+TGG | - | chr5_4:45495035-45495054 | None:intergenic | 35.0% | |
| GCCAATTCTGGATAAGTTAA+TGG | - | chr5_4:45495062-45495081 | None:intergenic | 35.0% | |
| ! | GTTATTGAACGTGACTTTTC+TGG | + | chr5_4:45495098-45495117 | Msa0853600:CDS | 35.0% |
| GCTTATAAAGTTCACCTTTG+CGG | - | chr5_4:45495202-45495221 | None:intergenic | 35.0% | |
| GTACAATTCATCCATGGTCA+TGG | - | chr5_4:45489600-45489619 | None:intergenic | 40.0% | |
| !! | GATTTTCAAGGAGAAAAGGG+TGG | + | chr5_4:45489632-45489651 | Msa0853600:CDS | 40.0% |
| GCCTTCTTTCGTTATCTCTT+TGG | + | chr5_4:45489740-45489759 | Msa0853600:intron | 40.0% | |
| ! | GCACGAATACTTTTCGGATA+AGG | + | chr5_4:45490610-45490629 | Msa0853600:intron | 40.0% |
| !! | TATATGTGTTGGTGTCGTGT+CGG | - | chr5_4:45490674-45490693 | None:intergenic | 40.0% |
| GTTGAAGAGGTGGAGTTATA+TGG | - | chr5_4:45491000-45491019 | None:intergenic | 40.0% | |
| ! | ATTTTCCCCTTCAACGATTC+TGG | - | chr5_4:45491190-45491209 | None:intergenic | 40.0% |
| TTGCTTGAGGACAAAGATGA+TGG | + | chr5_4:45491280-45491299 | Msa0853600:intron | 40.0% | |
| ! | TGGATCTAGAGTCAATGATG+AGG | + | chr5_4:45491300-45491319 | Msa0853600:intron | 40.0% |
| ! | GCTTATGGGCTTGTTTGTTA+AGG | + | chr5_4:45491346-45491365 | Msa0853600:intron | 40.0% |
| TGAATTGGGTGATGAAAGTG+AGG | + | chr5_4:45491607-45491626 | Msa0853600:CDS | 40.0% | |
| GAAGAAATCGCCAAAACTCA+TGG | + | chr5_4:45491758-45491777 | Msa0853600:CDS | 40.0% | |
| CTCATGGGAATGATATTGTC+AGG | + | chr5_4:45491774-45491793 | Msa0853600:CDS | 40.0% | |
| ! | GGTGAATCTAAAGCATGGAA+TGG | - | chr5_4:45492112-45492131 | None:intergenic | 40.0% |
| ! | CTTTGGGTGAATCTAAAGCA+TGG | - | chr5_4:45492117-45492136 | None:intergenic | 40.0% |
| ! | CATGCTTTAGATTCACCCAA+AGG | + | chr5_4:45492115-45492134 | Msa0853600:intron | 40.0% |
| TGCATGGATGAAAAGGTCTT+AGG | - | chr5_4:45492544-45492563 | None:intergenic | 40.0% | |
| TGTTCGTATGTTACGCACTT+TGG | + | chr5_4:45492566-45492585 | Msa0853600:intron | 40.0% | |
| ! | TCACGTTAACTAGTGTCACT+AGG | + | chr5_4:45492659-45492678 | Msa0853600:intron | 40.0% |
| GAAGGAATGTTCAAAGCCAA+TGG | + | chr5_4:45492781-45492800 | Msa0853600:CDS | 40.0% | |
| TTCTTTGGTCGGTATACTCT+AGG | - | chr5_4:45492865-45492884 | None:intergenic | 40.0% | |
| ! | CCTGAAGAGTTTTCTTTGGT+CGG | - | chr5_4:45492876-45492895 | None:intergenic | 40.0% |
| TTCACGTATACATGGGTGAA+GGG | + | chr5_4:45493020-45493039 | Msa0853600:intron | 40.0% | |
| GAATAAAGTTCCCATGGAGA+TGG | - | chr5_4:45493375-45493394 | None:intergenic | 40.0% | |
| ! | TCCCAGGAACATTTTATACC+CGG | + | chr5_4:45493425-45493444 | Msa0853600:intron | 40.0% |
| GCCTAACATGTTTACTGGAT+AGG | + | chr5_4:45493904-45493923 | Msa0853600:intron | 40.0% | |
| GCCTATCCAGTAAACATGTT+AGG | - | chr5_4:45493908-45493927 | None:intergenic | 40.0% | |
| TATTAATAGGCCGGCCTATT+AGG | - | chr5_4:45494004-45494023 | None:intergenic | 40.0% | |
| GCCTCTTTAGCCTATTTAGT+AGG | + | chr5_4:45494199-45494218 | Msa0853600:intron | 40.0% | |
| TCAGGTCAGACCAAGAAAAA+CGG | + | chr5_4:45494301-45494320 | Msa0853600:intron | 40.0% | |
| !!! | CTATCATAGGCCGTTTTTCT+TGG | - | chr5_4:45494314-45494333 | None:intergenic | 40.0% |
| CAAGAAAAACGGCCTATGAT+AGG | + | chr5_4:45494312-45494331 | Msa0853600:intron | 40.0% | |
| !!! | TTTTTTTACAAGCCTGAGCC+TGG | - | chr5_4:45494345-45494364 | None:intergenic | 40.0% |
| GACTCAGGTTTATCAAAGTC+TGG | + | chr5_4:45494376-45494395 | Msa0853600:intron | 40.0% | |
| TCATTCGGGATAAAACCTGT+CGG | - | chr5_4:45494646-45494665 | None:intergenic | 40.0% | |
| AATACACGCTCGTGATCATT+CGG | - | chr5_4:45494661-45494680 | None:intergenic | 40.0% | |
| AAGGAGGAAGTCAAAAAAGG+GGG | - | chr5_4:45494692-45494711 | None:intergenic | 40.0% | |
| GTAGGTCAAATGGAAAAAGG+AGG | - | chr5_4:45494708-45494727 | None:intergenic | 40.0% | |
| CGTGTCAATATTATGCAGGT+TGG | + | chr5_4:45494945-45494964 | Msa0853600:intron | 40.0% | |
| !! | ATTATGCAGGTTGGTATCCA+TGG | + | chr5_4:45494954-45494973 | Msa0853600:intron | 40.0% |
| ! | ACTTTGGTGACTGTATCAAC+TGG | - | chr5_4:45494984-45495003 | None:intergenic | 40.0% |
| TTCCTTGGTCCTAGTTACTT+TGG | - | chr5_4:45495000-45495019 | None:intergenic | 40.0% | |
| ! | TCTGGACAACATGATTTTGC+TGG | + | chr5_4:45495116-45495135 | Msa0853600:CDS | 40.0% |
| TGACTGAGGTACATAGAAAG+AGG | + | chr5_4:45495372-45495391 | Msa0853600:three_prime_UTR | 40.0% | |
| ATACGAACACAGACACGACA+TGG | + | chr5_4:45489834-45489853 | Msa0853600:intron | 45.0% | |
| GATGATGTGGAAGTTCGTCA+TGG | + | chr5_4:45490558-45490577 | Msa0853600:intron | 45.0% | |
| ATGTGGAAGTTCGTCATGGA+GGG | + | chr5_4:45490562-45490581 | Msa0853600:intron | 45.0% | |
| AACCTATGAAGCACGGATAC+CGG | - | chr5_4:45490764-45490783 | None:intergenic | 45.0% | |
| CCTTCAACGATTCTGGTGAA+GGG | - | chr5_4:45491183-45491202 | None:intergenic | 45.0% | |
| CCTTCACCAGAATCGTTGAA+GGG | + | chr5_4:45491181-45491200 | Msa0853600:CDS | 45.0% | |
| CTTCACCAGAATCGTTGAAG+GGG | + | chr5_4:45491182-45491201 | Msa0853600:CDS | 45.0% | |
| ! | CTTTGACTTTCAGGAGACTC+CGG | - | chr5_4:45491232-45491251 | None:intergenic | 45.0% |
| ! | GGAAGAAGTTGAGTTGCTTG+AGG | + | chr5_4:45491267-45491286 | Msa0853600:intron | 45.0% |
| ATTGGGTGATGAAAGTGAGG+AGG | + | chr5_4:45491610-45491629 | Msa0853600:CDS | 45.0% | |
| ATACATGCTGGGAAGCCAAA+AGG | + | chr5_4:45491668-45491687 | Msa0853600:CDS | 45.0% | |
| ATATCCAAAGGGTTCACGTG+TGG | + | chr5_4:45492152-45492171 | Msa0853600:CDS | 45.0% | |
| CCATGCATCCATCCATTCAT+AGG | - | chr5_4:45492195-45492214 | None:intergenic | 45.0% | |
| CCTATGAATGGATGGATGCA+TGG | + | chr5_4:45492192-45492211 | Msa0853600:CDS | 45.0% | |
| ATGGATGCATGGAGCTCAAA+TGG | + | chr5_4:45492203-45492222 | Msa0853600:CDS | 45.0% | |
| GGAATGTTCAAAGCCAATGG+TGG | + | chr5_4:45492784-45492803 | Msa0853600:CDS | 45.0% | |
| !! | TTCAAAGCCAATGGTGGATG+TGG | + | chr5_4:45492790-45492809 | Msa0853600:CDS | 45.0% |
| !! | TCAAAGCCAATGGTGGATGT+GGG | + | chr5_4:45492791-45492810 | Msa0853600:CDS | 45.0% |
| AACATACCCACATCCACCAT+TGG | - | chr5_4:45492800-45492819 | None:intergenic | 45.0% | |
| CCGACCAAAGAAAACTCTTC+AGG | + | chr5_4:45492873-45492892 | Msa0853600:CDS | 45.0% | |
| CTCTTCAGGTAAAGGGAATG+TGG | + | chr5_4:45492887-45492906 | Msa0853600:intron | 45.0% | |
| GTTCACGTATACATGGGTGA+AGG | + | chr5_4:45493019-45493038 | Msa0853600:intron | 45.0% | |
| GAAGGGTGGCAATCTGAATT+TGG | + | chr5_4:45493037-45493056 | Msa0853600:intron | 45.0% | |
| ACCTGTACACGAAAATCAGG+CGG | - | chr5_4:45493088-45493107 | None:intergenic | 45.0% | |
| TGGTGGGAATAAAGTTCCCA+TGG | - | chr5_4:45493381-45493400 | None:intergenic | 45.0% | |
| GGGAAAACTTGTCTATTCCC+AGG | + | chr5_4:45493409-45493428 | Msa0853600:intron | 45.0% | |
| CCCGGGTATAAAATGTTCCT+GGG | - | chr5_4:45493429-45493448 | None:intergenic | 45.0% | |
| ! | CCCAGGAACATTTTATACCC+GGG | + | chr5_4:45493426-45493445 | Msa0853600:intron | 45.0% |
| TCCCGGGTATAAAATGTTCC+TGG | - | chr5_4:45493430-45493449 | None:intergenic | 45.0% | |
| ATTAGGGTTGGGAATAGGTC+AGG | + | chr5_4:45493831-45493850 | Msa0853600:intron | 45.0% | |
| TAAACATGTTAGGCCAGGTC+AGG | - | chr5_4:45493898-45493917 | None:intergenic | 45.0% | |
| ACCTGGCCTAACATGTTTAC+TGG | + | chr5_4:45493899-45493918 | Msa0853600:intron | 45.0% | |
| TCCAGTAAACATGTTAGGCC+AGG | - | chr5_4:45493903-45493922 | None:intergenic | 45.0% | |
| CATGTTTACTGGATAGGCCT+AGG | + | chr5_4:45493910-45493929 | Msa0853600:intron | 45.0% | |
| GTCTGTTAAGCCTAATAGGC+CGG | + | chr5_4:45493991-45494010 | Msa0853600:intron | 45.0% | |
| ! | ATGCCTGGAAGTAGGTTTTC+AGG | + | chr5_4:45494256-45494275 | Msa0853600:intron | 45.0% |
| TGACCTGAAAACCTACTTCC+AGG | - | chr5_4:45494262-45494281 | None:intergenic | 45.0% | |
| CCTGGCTTATGACCTATCAT+AGG | - | chr5_4:45494327-45494346 | None:intergenic | 45.0% | |
| CCTATGATAGGTCATAAGCC+AGG | + | chr5_4:45494324-45494343 | Msa0853600:intron | 45.0% | |
| ATACACGCTCGTGATCATTC+GGG | - | chr5_4:45494660-45494679 | None:intergenic | 45.0% | |
| AGTCAAAAAAGGGGGCTGTA+TGG | - | chr5_4:45494684-45494703 | None:intergenic | 45.0% | |
| !!! | GCCTTCGGGATGGATTTTTT+CGG | + | chr5_4:45494779-45494798 | Msa0853600:intron | 45.0% |
| !!! | CCTTCGGGATGGATTTTTTC+GGG | + | chr5_4:45494780-45494799 | Msa0853600:intron | 45.0% |
| CTGTATCAACTGGAACACCA+TGG | - | chr5_4:45494974-45494993 | None:intergenic | 45.0% | |
| CACCAAAGTAACTAGGACCA+AGG | + | chr5_4:45494995-45495014 | Msa0853600:CDS | 45.0% | |
| TAGGACCAAGGAAGATGAGT+GGG | + | chr5_4:45495007-45495026 | Msa0853600:CDS | 45.0% | |
| ATGTGTAAGAGGGCCAATTC+TGG | - | chr5_4:45495074-45495093 | None:intergenic | 45.0% | |
| !! | CCTTCTCTTAGCTCTGATAC+AGG | - | chr5_4:45495155-45495174 | None:intergenic | 45.0% |
| CCTGTATCAGAGCTAAGAGA+AGG | + | chr5_4:45495152-45495171 | Msa0853600:CDS | 45.0% | |
| GTTCGTTTGTGTAACCGCAA+AGG | + | chr5_4:45495185-45495204 | Msa0853600:CDS | 45.0% | |
| !!! | CTTTATTTATTTATAAATTT+GGG | + | chr5_4:45492600-45492619 | Msa0853600:intron | 5.0% |
| !! | AAAAAATAAATAAATAAAAC+AGG | + | chr5_4:45492997-45493016 | Msa0853600:intron | 5.0% |
| !! | ATTTATTTCAAATATATTTA+CGG | - | chr5_4:45493797-45493816 | None:intergenic | 5.0% |
| !! | TTTAATAAATAGATATTAAT+AGG | - | chr5_4:45494017-45494036 | None:intergenic | 5.0% |
| GATCACCTATGGGGCCATTT+AGG | - | chr5_4:45489769-45489788 | None:intergenic | 50.0% | |
| AAATGGCCCCATAGGTGATC+AGG | + | chr5_4:45489769-45489788 | Msa0853600:intron | 50.0% | |
| ! | TATAGGTGACGGTGTCGAGT+CGG | + | chr5_4:45489913-45489932 | Msa0853600:intron | 50.0% |
| TATGAAGCACGGACACTCCT+CGG | - | chr5_4:45489985-45490004 | None:intergenic | 50.0% | |
| GGGCACAACTCCTACTTAAC+TGG | + | chr5_4:45490435-45490454 | Msa0853600:CDS | 50.0% | |
| GATGTGGAAGTTCGTCATGG+AGG | + | chr5_4:45490561-45490580 | Msa0853600:intron | 50.0% | |
| ACACGACACGTGTCTAACAC+GGG | - | chr5_4:45490642-45490661 | None:intergenic | 50.0% | |
| GACACGACACGTGTCTAACA+CGG | - | chr5_4:45490643-45490662 | None:intergenic | 50.0% | |
| TTGGCGACTTTGCGTTGAAG+AGG | - | chr5_4:45491013-45491032 | None:intergenic | 50.0% | |
| CCCTTCACCAGAATCGTTGA+AGG | + | chr5_4:45491180-45491199 | Msa0853600:CDS | 50.0% | |
| CCCTTCAACGATTCTGGTGA+AGG | - | chr5_4:45491184-45491203 | None:intergenic | 50.0% | |
| GAATCCACACGTGAACCCTT+TGG | - | chr5_4:45492159-45492178 | None:intergenic | 50.0% | |
| ACGTATACATGGGTGAAGGG+TGG | + | chr5_4:45493023-45493042 | Msa0853600:intron | 50.0% | |
| ! | TCCGCCTGATTTTCGTGTAC+AGG | + | chr5_4:45493084-45493103 | Msa0853600:intron | 50.0% |
| AATAGGTCAGGTCTGCCTAC+AGG | + | chr5_4:45493843-45493862 | Msa0853600:intron | 50.0% | |
| ATAGGTCAGGTCTGCCTACA+GGG | + | chr5_4:45493844-45493863 | Msa0853600:intron | 50.0% | |
| TACTGGATAGGCCTAGGCTT+AGG | + | chr5_4:45493916-45493935 | Msa0853600:intron | 50.0% | |
| ATAGGTCATAAGCCAGGCTC+AGG | + | chr5_4:45494330-45494349 | Msa0853600:intron | 50.0% | |
| TATAGGGGTGGGAATAGGCT+AGG | - | chr5_4:45494407-45494426 | None:intergenic | 50.0% | |
| AATTCGTGATGCCTTCGGGA+TGG | + | chr5_4:45494769-45494788 | Msa0853600:intron | 50.0% | |
| CCCGAAAAAATCCATCCCGA+AGG | - | chr5_4:45494783-45494802 | None:intergenic | 50.0% | |
| CTAGGACCAAGGAAGATGAG+TGG | + | chr5_4:45495006-45495025 | Msa0853600:CDS | 50.0% | |
| AAGATGAGTGGGTCCCAGTT+TGG | + | chr5_4:45495018-45495037 | Msa0853600:CDS | 50.0% | |
| GGTGACCTAAATGGCCCCAT+AGG | + | chr5_4:45489761-45489780 | Msa0853600:intron | 55.0% | |
| GGATTAGGTGTGGTGTGTCC+TGG | - | chr5_4:45489964-45489983 | None:intergenic | 55.0% | |
| GACACACCACACCTAATCCG+AGG | + | chr5_4:45489965-45489984 | Msa0853600:intron | 55.0% | |
| ! | GACACTCCTCGGATTAGGTG+TGG | - | chr5_4:45489974-45489993 | None:intergenic | 55.0% |
| CACGACACGTGTCTAACACG+GGG | - | chr5_4:45490641-45490660 | None:intergenic | 55.0% | |
| !! | ATGTGTTGGTGTCGTGTCGG+CGG | - | chr5_4:45490671-45490690 | None:intergenic | 55.0% |
| GTCAGTGTCCGTTTCGTGTC+CGG | + | chr5_4:45490742-45490761 | Msa0853600:intron | 55.0% | |
| CACGGATACCGGACACGAAA+CGG | - | chr5_4:45490753-45490772 | None:intergenic | 55.0% | |
| GTCCGGTATCCGTGCTTCAT+AGG | + | chr5_4:45490759-45490778 | Msa0853600:intron | 55.0% | |
| GCGACTTTGCGTTGAAGAGG+TGG | - | chr5_4:45491010-45491029 | None:intergenic | 55.0% | |
| TGACTTTCAGGAGACTCCGG+TGG | - | chr5_4:45491229-45491248 | None:intergenic | 55.0% | |
| GGGTGATGAAAGTGAGGAGG+AGG | + | chr5_4:45491613-45491632 | Msa0853600:CDS | 55.0% | |
| GAGGAGGAGGATGAGACTCT+TGG | + | chr5_4:45491626-45491645 | Msa0853600:CDS | 55.0% | |
| TAGGTCAGGTCTGCCTACAG+GGG | + | chr5_4:45493845-45493864 | Msa0853600:intron | 55.0% | |
| AGGTCAGGCCAAGCCAAAAC+AGG | - | chr5_4:45493883-45493902 | None:intergenic | 55.0% | |
| !!! | TGTTTTGGCTTGGCCTGACC+TGG | + | chr5_4:45493882-45493901 | Msa0853600:intron | 55.0% |
| TGGGACCCACTCATCTTCCT+TGG | - | chr5_4:45495015-45495034 | None:intergenic | 55.0% | |
| ! | GTGGGTCCCAGTTTGGAATG+AGG | + | chr5_4:45495025-45495044 | Msa0853600:CDS | 55.0% |
| ! | TGACGGTGTCGAGTCGGTGT+CGG | + | chr5_4:45489919-45489938 | Msa0853600:intron | 60.0% |
| CACGACACATGTCCGACACC+AGG | + | chr5_4:45489943-45489962 | Msa0853600:intron | 60.0% | |
| GGTGTGGTGTGTCCTGGTGT+CGG | - | chr5_4:45489958-45489977 | None:intergenic | 60.0% | |
| GCACGGACACTCCTCGGATT+AGG | - | chr5_4:45489979-45489998 | None:intergenic | 60.0% | |
| CGGACACTGACACGTCGACA+CGG | - | chr5_4:45490733-45490752 | None:intergenic | 60.0% | |
| ! | GCCTACGGTCTGGCCTGTTT+TGG | + | chr5_4:45493867-45493886 | Msa0853600:intron | 60.0% |
| GCCAAAACAGGCCAGACCGT+AGG | - | chr5_4:45493871-45493890 | None:intergenic | 60.0% | |
| !!! | CGGTCTGGCCTGTTTTGGCT+TGG | + | chr5_4:45493872-45493891 | Msa0853600:intron | 60.0% |
| GGGTGGGAATAGGCTAGGTC+AGG | - | chr5_4:45494402-45494421 | None:intergenic | 60.0% | |
| !! | TGGTGTCGTGTCGGCGGTGT+CGG | - | chr5_4:45490665-45490684 | None:intergenic | 65.0% |
| GGTCTGCCTACAGGGGCCTA+CGG | + | chr5_4:45493852-45493871 | Msa0853600:intron | 65.0% | |
| GCCTACAGGGGCCTACGGTC+TGG | + | chr5_4:45493857-45493876 | Msa0853600:intron | 70.0% | |
| GCCAGACCGTAGGCCCCTGT+AGG | - | chr5_4:45493861-45493880 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 45489440 | 45495437 | 45489440 | ID=Msa0853600;Name=Msa0853600 |
| chr5_4 | mRNA | 45489440 | 45495437 | 45489440 | ID=Msa0853600-mRNA-1;Parent=Msa0853600;Name=Msa0853600-mRNA-1;_AED=0.19;_eAED=0.19;_QI=0|0.5|0.55|1|0.5|0.55|9|175|478 |
| chr5_4 | exon | 45489440 | 45489682 | 45489440 | ID=Msa0853600-mRNA-1:exon:14351;Parent=Msa0853600-mRNA-1 |
| chr5_4 | exon | 45490387 | 45490529 | 45490387 | ID=Msa0853600-mRNA-1:exon:14352;Parent=Msa0853600-mRNA-1 |
| chr5_4 | exon | 45490898 | 45491033 | 45490898 | ID=Msa0853600-mRNA-1:exon:14353;Parent=Msa0853600-mRNA-1 |
| chr5_4 | exon | 45491115 | 45491273 | 45491115 | ID=Msa0853600-mRNA-1:exon:14354;Parent=Msa0853600-mRNA-1 |
| chr5_4 | exon | 45491605 | 45491795 | 45491605 | ID=Msa0853600-mRNA-1:exon:14355;Parent=Msa0853600-mRNA-1 |
| chr5_4 | exon | 45492125 | 45492242 | 45492125 | ID=Msa0853600-mRNA-1:exon:14356;Parent=Msa0853600-mRNA-1 |
| chr5_4 | exon | 45492754 | 45492894 | 45492754 | ID=Msa0853600-mRNA-1:exon:14357;Parent=Msa0853600-mRNA-1 |
| chr5_4 | exon | 45493019 | 45493024 | 45493019 | ID=Msa0853600-mRNA-1:exon:14358;Parent=Msa0853600-mRNA-1 |
| chr5_4 | exon | 45494963 | 45495437 | 45494963 | ID=Msa0853600-mRNA-1:exon:14359;Parent=Msa0853600-mRNA-1 |
| chr5_4 | CDS | 45489440 | 45489682 | 45489440 | ID=Msa0853600-mRNA-1:cds;Parent=Msa0853600-mRNA-1 |
| chr5_4 | CDS | 45490387 | 45490529 | 45490387 | ID=Msa0853600-mRNA-1:cds;Parent=Msa0853600-mRNA-1 |
| chr5_4 | CDS | 45490898 | 45491033 | 45490898 | ID=Msa0853600-mRNA-1:cds;Parent=Msa0853600-mRNA-1 |
| chr5_4 | CDS | 45491115 | 45491273 | 45491115 | ID=Msa0853600-mRNA-1:cds;Parent=Msa0853600-mRNA-1 |
| chr5_4 | CDS | 45491605 | 45491795 | 45491605 | ID=Msa0853600-mRNA-1:cds;Parent=Msa0853600-mRNA-1 |
| chr5_4 | CDS | 45492125 | 45492242 | 45492125 | ID=Msa0853600-mRNA-1:cds;Parent=Msa0853600-mRNA-1 |
| chr5_4 | CDS | 45492754 | 45492894 | 45492754 | ID=Msa0853600-mRNA-1:cds;Parent=Msa0853600-mRNA-1 |
| chr5_4 | CDS | 45493019 | 45493024 | 45493019 | ID=Msa0853600-mRNA-1:cds;Parent=Msa0853600-mRNA-1 |
| chr5_4 | CDS | 45494963 | 45495262 | 45494963 | ID=Msa0853600-mRNA-1:cds;Parent=Msa0853600-mRNA-1 |
| chr5_4 | three_prime_UTR | 45495263 | 45495437 | 45495263 | ID=Msa0853600-mRNA-1:three_prime_utr;Parent=Msa0853600-mRNA-1 |
| Gene Sequence |
| Protein sequence |
