Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0855400 | XP_003616084.1 | 95.055 | 728 | 13 | 2 | 1 | 705 | 1 | 728 | 0.0 | 1416 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0855400 | sp|Q9FGN7|SCC4_ARATH | 59.530 | 724 | 270 | 6 | 3 | 705 | 5 | 726 | 0.0 | 863 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0855400 | G7K5W1 | 95.055 | 728 | 13 | 2 | 1 | 705 | 1 | 728 | 0.0 | 1416 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0777320 | Msa0855400 | 0.836551 | 8.756597e-57 | -8.615850e-47 |
| Msa0143850 | Msa0855400 | 0.806570 | 7.714645e-50 | -8.615850e-47 |
| Msa0317740 | Msa0855400 | 0.809506 | 1.829735e-50 | -8.615850e-47 |
| Msa0855400 | Msa1166560 | 0.800534 | 1.378051e-48 | -8.615850e-47 |
| Msa0855400 | Msa1331000 | 0.805143 | 1.538904e-49 | -8.615850e-47 |
| Msa0855400 | Msa1333730 | 0.809243 | 2.083827e-50 | -8.615850e-47 |
| Msa0855400 | Msa1437210 | 0.834887 | 2.311444e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0855400 | MtrunA17_Chr5g0433081 | 95.055 | 728 | 13 | 2 | 1 | 705 | 1 | 728 | 0.0 | 1416 |
| Msa0855400 | MtrunA17_Chr6g0469601 | 76.316 | 228 | 52 | 1 | 415 | 642 | 1 | 226 | 3.69e-120 | 358 |
| Msa0855400 | MtrunA17_Chr6g0469621 | 76.378 | 127 | 29 | 1 | 1 | 127 | 1 | 126 | 8.11e-61 | 201 |
| Msa0855400 | MtrunA17_Chr6g0469611 | 73.984 | 123 | 32 | 0 | 288 | 410 | 68 | 190 | 9.07e-56 | 189 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0855400 | AT5G51340.1 | 59.530 | 724 | 270 | 6 | 3 | 705 | 5 | 726 | 0.0 | 863 |
Find 188 sgRNAs with CRISPR-Local
Find 670 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTCTTGAACCAGTATATTT+TGG | 0.081689 | 5_4:-48687255 | Msa0855400:CDS |
| GCAGTTGACACATACTTATT+TGG | 0.120120 | 5_4:-48683437 | Msa0855400:CDS |
| GGTAAAGATGGAAACCTTTC+TGG | 0.175456 | 5_4:+48681154 | None:intergenic |
| GCAATGCAATATAGAGTTTC+TGG | 0.182953 | 5_4:-48680728 | None:intergenic |
| TGACATGTTAACATTATAAT+AGG | 0.187357 | 5_4:-48681025 | Msa0855400:three_prime_UTR |
| TACTATTTCAATATGATAAA+TGG | 0.195118 | 5_4:+48681552 | None:intergenic |
| TGCCAAGGGTTGTTAAATAT+TGG | 0.199482 | 5_4:+48683395 | None:intergenic |
| GATCTGATAACTGTTGTATT+TGG | 0.202653 | 5_4:-48687138 | Msa0855400:CDS |
| GCAGCTTTATACAAAGAATT+AGG | 0.222796 | 5_4:-48681661 | Msa0855400:intron |
| TATTGTGAATTAATTATTAT+AGG | 0.234633 | 5_4:-48681214 | Msa0855400:three_prime_UTR |
| GTGATGTTCCTTCTCAAGTC+TGG | 0.241430 | 5_4:-48683294 | Msa0855400:CDS |
| CTGCAGGCACTTGATTTGAT+TGG | 0.246316 | 5_4:-48684660 | Msa0855400:intron |
| CAGTTGACACATACTTATTT+GGG | 0.261713 | 5_4:-48683436 | Msa0855400:CDS |
| ACATTTGCACTCACTTTATC+TGG | 0.269511 | 5_4:+48687710 | None:intergenic |
| GCAATGGGATGATGATAATT+TGG | 0.276465 | 5_4:-48687780 | Msa0855400:CDS |
| TAACATTATAATAGGGGTTT+TGG | 0.276526 | 5_4:-48681017 | Msa0855400:three_prime_UTR |
| TTAATAAATGCAATGAGATT+TGG | 0.289386 | 5_4:-48687745 | Msa0855400:CDS |
| GACATGTTAACATTATAATA+GGG | 0.305580 | 5_4:-48681024 | Msa0855400:three_prime_UTR |
| GCAACACTCTTCTATCTATA+TGG | 0.312255 | 5_4:-48686371 | Msa0855400:CDS |
| ATCCTTTAGTGATGTTATAT+CGG | 0.313776 | 5_4:-48680880 | Msa0855400:three_prime_UTR |
| ATGAATGGGTTCAGTTCAAT+TGG | 0.315950 | 5_4:-48687285 | Msa0855400:CDS |
| CTTGATCTTGCTGCTTCTGC+TGG | 0.320668 | 5_4:-48690794 | Msa0855400:CDS |
| ATTTAGCGTGATTAGCGTTA+TGG | 0.320986 | 5_4:+48691042 | None:intergenic |
| GCCAAGGGTTGTTAAATATT+GGG | 0.323023 | 5_4:+48683396 | None:intergenic |
| AAGCAATAGCAGAAGGACTA+TGG | 0.331016 | 5_4:-48691211 | Msa0855400:CDS |
| CTTGATATTCCAGAATCTAT+TGG | 0.335505 | 5_4:-48681353 | Msa0855400:CDS |
| ATCTGATAACTGTTGTATTT+GGG | 0.336485 | 5_4:-48687137 | Msa0855400:CDS |
| TCACTACTAACCTGCAACTC+TGG | 0.355228 | 5_4:+48688266 | None:intergenic |
| CTGCCATTCCCAAAATATAC+TGG | 0.357430 | 5_4:+48687246 | None:intergenic |
| TAATAAATGCAATGAGATTT+GGG | 0.359630 | 5_4:-48687744 | Msa0855400:CDS |
| TTTAACAACCCTTGGCAGTT+TGG | 0.361450 | 5_4:-48683389 | Msa0855400:CDS |
| TGCAGGCACTTGATTTGATT+GGG | 0.367684 | 5_4:-48684659 | Msa0855400:intron |
| TTTAGCGTGATTAGCGTTAT+GGG | 0.367809 | 5_4:+48691043 | None:intergenic |
| TATTATAGGTGATTGCTCTA+AGG | 0.372713 | 5_4:-48681200 | Msa0855400:three_prime_UTR |
| CTTGCTGCTTCTGCTGGAAA+TGG | 0.378335 | 5_4:-48690788 | Msa0855400:CDS |
| GAATCCATTACTTCATAAAC+TGG | 0.379344 | 5_4:+48684636 | None:intergenic |
| AGTCAGTGTTATCATCTTGT+TGG | 0.381878 | 5_4:-48690854 | Msa0855400:CDS |
| ACAGGCATATCCACATTCTA+AGG | 0.382816 | 5_4:+48688307 | None:intergenic |
| GGAAGCCATTCCCCATCAAT+AGG | 0.388509 | 5_4:+48687186 | None:intergenic |
| TCTTAGATCAAAGTCTTTCC+AGG | 0.393758 | 5_4:-48687380 | Msa0855400:CDS |
| TACAAAGAATTAGGAGAAAG+AGG | 0.399235 | 5_4:-48681652 | Msa0855400:CDS |
| AGCTATTCAACCTCAGAAAC+AGG | 0.402241 | 5_4:-48690831 | Msa0855400:CDS |
| AGTATGCTACCCAGAGTTGC+AGG | 0.403307 | 5_4:-48688276 | Msa0855400:intron |
| AGGAGAAAGAGGAAATGAAT+TGG | 0.410295 | 5_4:-48681641 | Msa0855400:CDS |
| GACTTCAACGATTGGGAAGA+AGG | 0.415786 | 5_4:+48691106 | None:intergenic |
| ACTGGTGTTCTCTTTGCTTA+CGG | 0.421280 | 5_4:-48684591 | Msa0855400:CDS |
| AGGAACATCACAAAGCTTCT+TGG | 0.426420 | 5_4:+48683306 | None:intergenic |
| AGCCAACAGAATGAGCATAT+TGG | 0.429005 | 5_4:+48685043 | None:intergenic |
| AAACAAGGTAATGGAGTCAA+TGG | 0.429578 | 5_4:+48691304 | None:intergenic |
| TGATGTTCCTTCTCAAGTCT+GGG | 0.431657 | 5_4:-48683293 | Msa0855400:CDS |
| AATCTGAAGACCTGCATAAG+AGG | 0.433902 | 5_4:-48681594 | Msa0855400:CDS |
| GCTGGCAGGCCAATAGATTC+TGG | 0.437072 | 5_4:+48681344 | None:intergenic |
| TTTCCTCATGGAAGTTAATC+CGG | 0.443904 | 5_4:-48681242 | Msa0855400:three_prime_UTR |
| GTAGGGGTTAGAGAGAAAAC+TGG | 0.445928 | 5_4:-48684609 | Msa0855400:CDS |
| AGTTCCACAATTACATGAGT+TGG | 0.448049 | 5_4:-48681420 | Msa0855400:CDS |
| AACAAGGTAATGGAGTCAAT+GGG | 0.449558 | 5_4:+48691305 | None:intergenic |
| GTTGTATTTGGGCGCCCAAA+AGG | 0.455207 | 5_4:-48687126 | Msa0855400:CDS |
| CCAGGTCTGATCTTCACTAC+AGG | 0.456609 | 5_4:-48687362 | Msa0855400:CDS |
| CGATTGGGAAGAAGGAAACT+TGG | 0.457515 | 5_4:+48691114 | None:intergenic |
| TCCCAATATTTAACAACCCT+TGG | 0.460214 | 5_4:-48683397 | Msa0855400:CDS |
| TTTGAGATCGTCTTTGACCT+TGG | 0.465683 | 5_4:-48683329 | Msa0855400:CDS |
| TCAATGCTAGTTGATATAGA+TGG | 0.466176 | 5_4:-48681302 | Msa0855400:CDS |
| CACTCTTCTATCTATATGGC+TGG | 0.467721 | 5_4:-48686367 | Msa0855400:CDS |
| AGAATACGCTGAAGCGCAGC+AGG | 0.467829 | 5_4:-48686281 | Msa0855400:intron |
| CAATCTGGATGCTGCTGTGA+GGG | 0.468077 | 5_4:-48687454 | Msa0855400:CDS |
| GCTGTTTCTTATATCTGCAT+TGG | 0.468996 | 5_4:-48684802 | Msa0855400:CDS |
| AATTACATGAGTTGGAAATC+AGG | 0.469313 | 5_4:-48681412 | Msa0855400:CDS |
| CAGTAAACTAGGACAGGAAA+AGG | 0.470908 | 5_4:+48680750 | None:intergenic |
| CTGCCTTTGCTATTTCTCCT+CGG | 0.475620 | 5_4:+48691165 | None:intergenic |
| TCATTATATTGAAGCAGTAA+AGG | 0.476671 | 5_4:-48685001 | Msa0855400:intron |
| TCATTATAAAAGAGCAAGCC+AGG | 0.477095 | 5_4:+48687540 | None:intergenic |
| AATATTGGGAAATAAGTTGA+AGG | 0.479547 | 5_4:+48683410 | None:intergenic |
| CATCAGCCAGCCTCTTATGC+AGG | 0.479985 | 5_4:+48681584 | None:intergenic |
| GTTGTAGCAATTGTTGTTGA+AGG | 0.481087 | 5_4:-48690924 | Msa0855400:intron |
| TTAGCACCACCTCCTATTGA+TGG | 0.483364 | 5_4:-48687198 | Msa0855400:CDS |
| GCAGATGAGTTATTGAAGCT+TGG | 0.485607 | 5_4:-48686520 | Msa0855400:intron |
| CAGCATCCAGATTGTCAACA+TGG | 0.487902 | 5_4:+48687463 | None:intergenic |
| AAGAAACAGCTGCATAAACT+TGG | 0.488131 | 5_4:+48684815 | None:intergenic |
| TGCACCCCATGTTGACAATC+TGG | 0.490493 | 5_4:-48687469 | Msa0855400:CDS |
| TGCAATGGCAGGACCAAGCA+TGG | 0.493939 | 5_4:-48681387 | Msa0855400:CDS |
| GAAATCAGGCGTGCAATGGC+AGG | 0.494077 | 5_4:-48681398 | Msa0855400:CDS |
| ATTAATTCACAATAATATAC+CGG | 0.495687 | 5_4:+48681223 | None:intergenic |
| TGTGGAAAGCGCATACAGTC+GGG | 0.497372 | 5_4:-48687090 | Msa0855400:CDS |
| GTTGAAGAGTTTCACCAGAA+AGG | 0.498557 | 5_4:-48681168 | Msa0855400:three_prime_UTR |
| TGGGCCAGTTTATGAAGTAA+TGG | 0.502117 | 5_4:-48684640 | Msa0855400:CDS |
| AAAAGAGAAAATAGTGGTGT+AGG | 0.508592 | 5_4:-48680988 | Msa0855400:three_prime_UTR |
| AGATTATTAACTCCCATGCT+TGG | 0.509167 | 5_4:+48681374 | None:intergenic |
| TTCCGATATAACATCACTAA+AGG | 0.509848 | 5_4:+48680878 | None:intergenic |
| GATGGAACGGGTGCTTGTGC+TGG | 0.512012 | 5_4:+48681326 | None:intergenic |
| ACTAGCATTGATGATGGAAC+GGG | 0.513415 | 5_4:+48681314 | None:intergenic |
| AAGAAAGAAAGAAACAAGAA+TGG | 0.513471 | 5_4:-48691234 | Msa0855400:exon |
| CTGATCTTCACTACAGGGAA+AGG | 0.519030 | 5_4:-48687356 | Msa0855400:CDS |
| ATATCAACTAGCATTGATGA+TGG | 0.519320 | 5_4:+48681308 | None:intergenic |
| CGTTATGGGAATGATGAAGA+AGG | 0.519529 | 5_4:+48691057 | None:intergenic |
| TCGGGGATGCGTATAATTCA+AGG | 0.520091 | 5_4:-48687072 | Msa0855400:intron |
| AGCAATAGCAGAAGGACTAT+GGG | 0.521406 | 5_4:-48691210 | Msa0855400:CDS |
| AGACAGCCTTGAGGTAAAGA+TGG | 0.522059 | 5_4:+48681142 | None:intergenic |
| TTAAACAAAACCTGTTTCTG+AGG | 0.523904 | 5_4:+48690821 | None:intergenic |
| CACTACTAACCTGCAACTCT+GGG | 0.524476 | 5_4:+48688267 | None:intergenic |
| TGAATGGGTTCAGTTCAATT+GGG | 0.525092 | 5_4:-48687284 | Msa0855400:CDS |
| TGCGTGACACTGTACAAGCC+AGG | 0.526369 | 5_4:-48683357 | Msa0855400:CDS |
| TGATGCTGAATCTAATTCAC+AGG | 0.529148 | 5_4:-48684779 | Msa0855400:intron |
| ATTTCCAACTCATGTAATTG+TGG | 0.531387 | 5_4:+48681416 | None:intergenic |
| TGCATGCCCACCTCATGCAA+TGG | 0.532942 | 5_4:-48687796 | Msa0855400:CDS |
| GTGTGGAAAGCGCATACAGT+CGG | 0.533624 | 5_4:-48687091 | Msa0855400:CDS |
| ACATACTAAATTAACTGTAC+AGG | 0.534807 | 5_4:+48681093 | None:intergenic |
| ATCACAAAGCTTCTTGGCCA+AGG | 0.536720 | 5_4:+48683312 | None:intergenic |
| ACTCATTAAGTTACATGAGC+AGG | 0.537381 | 5_4:-48681070 | Msa0855400:three_prime_UTR |
| ATATTGCATTGCAGTAAACT+AGG | 0.537927 | 5_4:+48680739 | None:intergenic |
| CACCTCCTATTGATGGGGAA+TGG | 0.538532 | 5_4:-48687191 | Msa0855400:CDS |
| TGTAGAATTCGTTTGGCGAA+GGG | 0.540683 | 5_4:-48683463 | Msa0855400:intron |
| TGATACTAACACAACGTTCG+AGG | 0.541180 | 5_4:+48691015 | None:intergenic |
| ACATGTTAACATTATAATAG+GGG | 0.541331 | 5_4:-48681023 | Msa0855400:three_prime_UTR |
| TGTCAATTGAAGGAGACTAC+CGG | 0.542673 | 5_4:-48688342 | Msa0855400:intron |
| GTGGTAGAAGACGTGGAAAA+CGG | 0.543016 | 5_4:-48681277 | Msa0855400:CDS |
| TAGCACCACCTCCTATTGAT+GGG | 0.543363 | 5_4:-48687197 | Msa0855400:CDS |
| TGAAGACCTGCATAAGAGGC+TGG | 0.544200 | 5_4:-48681590 | Msa0855400:CDS |
| AGGTTTCCATCTTTACCTCA+AGG | 0.546809 | 5_4:-48681148 | Msa0855400:three_prime_UTR |
| AACTAGCATTGATGATGGAA+CGG | 0.548065 | 5_4:+48681313 | None:intergenic |
| AACAGCTGAGAAACATGAAT+GGG | 0.548330 | 5_4:-48687299 | Msa0855400:CDS |
| GAACGGGTGCTTGTGCTGGC+AGG | 0.548345 | 5_4:+48681330 | None:intergenic |
| TTGTAGAATTCGTTTGGCGA+AGG | 0.549000 | 5_4:-48683464 | Msa0855400:intron |
| GCATGCCCACCTCATGCAAT+GGG | 0.550739 | 5_4:-48687795 | Msa0855400:CDS |
| TGCATCATTGAGATGCTAAG+AGG | 0.551180 | 5_4:-48685066 | Msa0855400:CDS |
| GGCCAATATGCTCATTCTGT+TGG | 0.551977 | 5_4:-48685045 | Msa0855400:CDS |
| CATCATCCCATTGCATGAGG+TGG | 0.552934 | 5_4:+48687789 | None:intergenic |
| GGGAATGGCAGAAGGACACT+AGG | 0.555612 | 5_4:-48687234 | Msa0855400:CDS |
| TGATCTTCACTACAGGGAAA+GGG | 0.555873 | 5_4:-48687355 | Msa0855400:CDS |
| CTAGTTGATATAGATGGTAG+TGG | 0.556656 | 5_4:-48681296 | Msa0855400:CDS |
| GCATTGCAGTAAACTAGGAC+AGG | 0.557438 | 5_4:+48680744 | None:intergenic |
| GAACAGCTGAGAAACATGAA+TGG | 0.557631 | 5_4:-48687300 | Msa0855400:CDS |
| GTCAATTGAAGGAGACTACC+GGG | 0.560449 | 5_4:-48688341 | Msa0855400:intron |
| GATTGCTCTAAGGTGCAAGC+AGG | 0.561848 | 5_4:-48681190 | Msa0855400:three_prime_UTR |
| TGCTTCAATATAATGAAAGA+CGG | 0.567370 | 5_4:+48685008 | None:intergenic |
| CCTCAGAGACAACAATGCCC+TGG | 0.567425 | 5_4:-48687558 | Msa0855400:intron |
| CTGCTGTGAGGGCTGAAAAG+AGG | 0.568371 | 5_4:-48687443 | Msa0855400:CDS |
| ATACAATGGCCAAACTGCCA+AGG | 0.569363 | 5_4:+48683380 | None:intergenic |
| TCAGTTTCTTGAAAACAAAG+TGG | 0.569453 | 5_4:-48686323 | Msa0855400:CDS |
| GTAGCATACTTCAGTAGCAC+AGG | 0.569812 | 5_4:+48688289 | None:intergenic |
| TGGGTTCAGTTCAATTGGGA+GGG | 0.569968 | 5_4:-48687280 | Msa0855400:CDS |
| CAGGTCTGATCTTCACTACA+GGG | 0.570244 | 5_4:-48687361 | Msa0855400:CDS |
| AGACGATCTCAAAATCTCCC+TGG | 0.571241 | 5_4:+48683339 | None:intergenic |
| TTGTAGCAATTGTTGTTGAA+GGG | 0.572141 | 5_4:-48690923 | Msa0855400:intron |
| CCTGTAGTGAAGATCAGACC+TGG | 0.572154 | 5_4:+48687362 | None:intergenic |
| AGCATCCAGATTGTCAACAT+GGG | 0.577996 | 5_4:+48687464 | None:intergenic |
| TCACATGGCTGTAATATAGT+CGG | 0.579045 | 5_4:+48685090 | None:intergenic |
| AACAAGATCTACAAGAAGCA+AGG | 0.579321 | 5_4:-48684551 | Msa0855400:intron |
| ATCATCCCATTGCATGAGGT+GGG | 0.580026 | 5_4:+48687790 | None:intergenic |
| TTGAAGCTTGGAATTACTGA+TGG | 0.582266 | 5_4:-48686508 | Msa0855400:CDS |
| GGTAATGGAGTCAATGGGGA+AGG | 0.583473 | 5_4:+48691310 | None:intergenic |
| TCAATCTCCGCCTTAGAATG+TGG | 0.584821 | 5_4:-48688317 | Msa0855400:CDS |
| GTTGGAAATCAGGCGTGCAA+TGG | 0.586610 | 5_4:-48681402 | Msa0855400:CDS |
| TACAATGGCCAAACTGCCAA+GGG | 0.586699 | 5_4:+48683381 | None:intergenic |
| GCAATGGCAGGACCAAGCAT+GGG | 0.592635 | 5_4:-48681386 | Msa0855400:CDS |
| TCTATCAAAAGAGAAAATAG+TGG | 0.592841 | 5_4:-48680994 | Msa0855400:three_prime_UTR |
| GTCAGCACCCAGACTTGAGA+AGG | 0.594095 | 5_4:+48683286 | None:intergenic |
| TCTAAGGCGGAGATTGAACC+CGG | 0.602278 | 5_4:+48688323 | None:intergenic |
| ACAATCTGGATGCTGCTGTG+AGG | 0.602674 | 5_4:-48687455 | Msa0855400:CDS |
| ATGGGTTCAGTTCAATTGGG+AGG | 0.607181 | 5_4:-48687281 | Msa0855400:CDS |
| GCGTGACACTGTACAAGCCA+GGG | 0.608865 | 5_4:-48683356 | Msa0855400:CDS |
| CATTCCCCATCAATAGGAGG+TGG | 0.612930 | 5_4:+48687192 | None:intergenic |
| TACAGTGTCACGCAATACAA+TGG | 0.617237 | 5_4:+48683366 | None:intergenic |
| GGATAGATGATAGAACTCAC+TGG | 0.619742 | 5_4:-48681049 | Msa0855400:three_prime_UTR |
| GTAATGGAGTCAATGGGGAA+GGG | 0.623908 | 5_4:+48691311 | None:intergenic |
| CACTTCAACTCAAAACAAGA+CGG | 0.636375 | 5_4:+48690896 | None:intergenic |
| AGAATGGAAGCAATAGCAGA+AGG | 0.637263 | 5_4:-48691218 | Msa0855400:CDS |
| AGCCATTCCCCATCAATAGG+AGG | 0.643958 | 5_4:+48687189 | None:intergenic |
| GATGGTAGTGGTAGAAGACG+TGG | 0.645989 | 5_4:-48681284 | Msa0855400:CDS |
| CATTATAAAAGAGCAAGCCA+GGG | 0.646109 | 5_4:+48687541 | None:intergenic |
| AGCACCACCTCCTATTGATG+GGG | 0.647753 | 5_4:-48687196 | Msa0855400:CDS |
| GGAATGATGAAGAAGGATTG+TGG | 0.649271 | 5_4:+48691064 | None:intergenic |
| AGTTGACACATACTTATTTG+GGG | 0.650368 | 5_4:-48683435 | Msa0855400:CDS |
| ATCTCAATGATGCATTCACA+TGG | 0.652328 | 5_4:+48685075 | None:intergenic |
| GGAATTACTGATGGTGTCAG+AGG | 0.653217 | 5_4:-48686499 | Msa0855400:intron |
| TATCATCATCCCATTGCATG+AGG | 0.653693 | 5_4:+48687786 | None:intergenic |
| GTGGAAAGCGCATACAGTCG+GGG | 0.661021 | 5_4:-48687089 | Msa0855400:CDS |
| GCATCCAGATTGTCAACATG+GGG | 0.665416 | 5_4:+48687465 | None:intergenic |
| GGCATATCCACATTCTAAGG+CGG | 0.674816 | 5_4:+48688310 | None:intergenic |
| ACATATGCAAGAGCTAGTGA+AGG | 0.679017 | 5_4:-48687412 | Msa0855400:CDS |
| GTGGGCATGCAATAATGAAG+TGG | 0.679110 | 5_4:+48687808 | None:intergenic |
| GCAATAGCAGAAGGACTATG+GGG | 0.694633 | 5_4:-48691209 | Msa0855400:CDS |
| AAACCGAGGAGAAATAGCAA+AGG | 0.702576 | 5_4:-48691168 | Msa0855400:CDS |
| GCACATATTCTATCGTACGC+GGG | 0.702651 | 5_4:-48687511 | Msa0855400:CDS |
| TGCACATATTCTATCGTACG+CGG | 0.710853 | 5_4:-48687512 | Msa0855400:CDS |
| ATACTTGACAGACAGCCTTG+AGG | 0.715733 | 5_4:+48681133 | None:intergenic |
| GCAGACCATCATGAAAACCG+AGG | 0.718693 | 5_4:-48691182 | Msa0855400:CDS |
| ATACCGGATTAACTTCCATG+AGG | 0.726850 | 5_4:+48681239 | None:intergenic |
| ACAAGGTAATGGAGTCAATG+GGG | 0.726917 | 5_4:+48691306 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTAAAAAAATTATTAAAA+AGG | + | chr5_4:48683974-48683993 | None:intergenic | 0.0% |
| !! | ATTAAATTAAACAAACAAAT+TGG | + | chr5_4:48681114-48681133 | None:intergenic | 10.0% |
| !! | ATATATATTCATTCAAATAA+GGG | + | chr5_4:48682500-48682519 | None:intergenic | 10.0% |
| !! | TATATATATTCATTCAAATA+AGG | + | chr5_4:48682501-48682520 | None:intergenic | 10.0% |
| !!! | TTTATTTATTTATTTCTGTT+TGG | - | chr5_4:48682658-48682677 | Msa0855400:intron | 10.0% |
| !!! | TTTTTTTAATTCATAAATTC+TGG | - | chr5_4:48683552-48683571 | Msa0855400:intron | 10.0% |
| !!! | TTTTTTAATTCATAAATTCT+GGG | - | chr5_4:48683553-48683572 | Msa0855400:intron | 10.0% |
| !!! | TTTTTTGTTTATTTTATTGA+AGG | - | chr5_4:48683660-48683679 | Msa0855400:intron | 10.0% |
| !!! | TTATAAAATAGTTTAAAACA+GGG | + | chr5_4:48689291-48689310 | None:intergenic | 10.0% |
| !! | TATTGTGAATTAATTATTAT+AGG | - | chr5_4:48690863-48690882 | Msa0855400:CDS | 10.0% |
| !!! | TTTTTATTTTGTTTGAAACA+AGG | + | chr5_4:48680791-48680810 | None:intergenic | 15.0% |
| !! | TAGGTAACTAATTATAAAAA+AGG | + | chr5_4:48682029-48682048 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTAAAACCTTGAA+TGG | - | chr5_4:48682215-48682234 | Msa0855400:intron | 15.0% |
| !!! | TTATTAAAAAGGTCATTTTA+GGG | + | chr5_4:48683963-48683982 | None:intergenic | 15.0% |
| !!! | ATTATTAAAAAGGTCATTTT+AGG | + | chr5_4:48683964-48683983 | None:intergenic | 15.0% |
| !! | TTTGAATCGAAAATAAAAAA+TGG | - | chr5_4:48685139-48685158 | Msa0855400:intron | 15.0% |
| !! | AACATAAAGAAAATAAAGAT+GGG | + | chr5_4:48686483-48686502 | None:intergenic | 15.0% |
| !!! | TTCAAATTTGAAATGATTAA+TGG | - | chr5_4:48686791-48686810 | Msa0855400:intron | 15.0% |
| !!! | CAAAAATATGAAGTTATTTT+TGG | + | chr5_4:48687205-48687224 | None:intergenic | 15.0% |
| !! | TCAATTAATTAAACATTACA+TGG | - | chr5_4:48688507-48688526 | Msa0855400:intron | 15.0% |
| !! | CAATTAATTAAACATTACAT+GGG | - | chr5_4:48688508-48688527 | Msa0855400:intron | 15.0% |
| !! | AAAAAAAAAAAAATGCAACT+TGG | + | chr5_4:48688595-48688614 | None:intergenic | 15.0% |
| !!! | TATAAAATAGTTTAAAACAG+GGG | + | chr5_4:48689290-48689309 | None:intergenic | 15.0% |
| !!! | CTTATAAAATAGTTTAAAAC+AGG | + | chr5_4:48689292-48689311 | None:intergenic | 15.0% |
| !!! | CAAATTCAAATGTTTTTTTA+GGG | + | chr5_4:48689676-48689695 | None:intergenic | 15.0% |
| !!! | TCAAATTCAAATGTTTTTTT+AGG | + | chr5_4:48689677-48689696 | None:intergenic | 15.0% |
| !! | TACTATTTCAATATGATAAA+TGG | + | chr5_4:48690528-48690547 | None:intergenic | 15.0% |
| !! | ATTAATTCACAATAATATAC+CGG | + | chr5_4:48690857-48690876 | None:intergenic | 15.0% |
| !!! | CTTTTCATCTTTTAGTATTT+AGG | - | chr5_4:48681338-48681357 | Msa0855400:CDS | 20.0% |
| !!! | ATATTTTGTAAGAGACTAAA+TGG | + | chr5_4:48681531-48681550 | None:intergenic | 20.0% |
| !!! | AGTTTGGTATTTTTTTTATC+AGG | - | chr5_4:48681656-48681675 | Msa0855400:CDS | 20.0% |
| !!! | GTTTGGTATTTTTTTTATCA+GGG | - | chr5_4:48681657-48681676 | Msa0855400:CDS | 20.0% |
| !!! | TGAACCATTTTTTAAAACTA+TGG | - | chr5_4:48681849-48681868 | Msa0855400:intron | 20.0% |
| !!! | CATTCCATAGTTTTAAAAAA+TGG | + | chr5_4:48681856-48681875 | None:intergenic | 20.0% |
| !!! | ACAAATAATAACAAGTATTG+CGG | - | chr5_4:48682332-48682351 | Msa0855400:intron | 20.0% |
| !! | ATAGTACATCAAATAAGAAT+TGG | - | chr5_4:48682711-48682730 | Msa0855400:intron | 20.0% |
| !! | TAGTACATCAAATAAGAATT+GGG | - | chr5_4:48682712-48682731 | Msa0855400:intron | 20.0% |
| !! | TCTGATAATATATATGTCAA+AGG | - | chr5_4:48683479-48683498 | Msa0855400:intron | 20.0% |
| !! | TTAATAAATGCAATGAGATT+TGG | - | chr5_4:48684332-48684351 | Msa0855400:intron | 20.0% |
| !! | TAATAAATGCAATGAGATTT+GGG | - | chr5_4:48684333-48684352 | Msa0855400:intron | 20.0% |
| !! | GTGTTAGATTAAGTTAAAAA+AGG | + | chr5_4:48684475-48684494 | None:intergenic | 20.0% |
| !!! | TGCATAAATTTTACTTCTTT+TGG | - | chr5_4:48685057-48685076 | Msa0855400:CDS | 20.0% |
| !! | GAAGAAAAATTATTTCCATA+AGG | + | chr5_4:48685535-48685554 | None:intergenic | 20.0% |
| !!! | TTTTGTCTTCTTTGTTTAAA+GGG | + | chr5_4:48686001-48686020 | None:intergenic | 20.0% |
| !!! | TTTTTGTCTTCTTTGTTTAA+AGG | + | chr5_4:48686002-48686021 | None:intergenic | 20.0% |
| !! | GGAAAAATACATAATACAAA+AGG | - | chr5_4:48686224-48686243 | Msa0855400:intron | 20.0% |
| !! | AAAATACATAATACAAAAGG+AGG | - | chr5_4:48686227-48686246 | Msa0855400:intron | 20.0% |
| !! | CAACATAAAGAAAATAAAGA+TGG | + | chr5_4:48686484-48686503 | None:intergenic | 20.0% |
| !!! | TTTTTCTTGTACTATTTTAG+TGG | - | chr5_4:48686730-48686749 | Msa0855400:intron | 20.0% |
| !!! | TTTCAAATTTGAAGTATAAC+AGG | + | chr5_4:48686784-48686803 | None:intergenic | 20.0% |
| !! | TATAAAATTGTTTAGCATAG+TGG | - | chr5_4:48686847-48686866 | Msa0855400:intron | 20.0% |
| !!! | TCAGATCTGAAATTTATTAA+TGG | - | chr5_4:48686909-48686928 | Msa0855400:intron | 20.0% |
| !! | ATACAAACAAGACTATAAAT+TGG | + | chr5_4:48687612-48687631 | None:intergenic | 20.0% |
| !!! | AATTTATAGTCTTGTTTGTA+TGG | - | chr5_4:48687611-48687630 | Msa0855400:intron | 20.0% |
| !! | AAATTGAAGAATAATAGTTG+TGG | + | chr5_4:48687768-48687787 | None:intergenic | 20.0% |
| !! | TTGTTCAAAATAACTTATAC+TGG | - | chr5_4:48687786-48687805 | Msa0855400:CDS | 20.0% |
| !!! | AATTTTTGCTTATTAATTCC+AGG | + | chr5_4:48687908-48687927 | None:intergenic | 20.0% |
| !! | GTTTATCAATCAATAAATGT+AGG | + | chr5_4:48688424-48688443 | None:intergenic | 20.0% |
| !!! | TTTTTTTTGTAGAATTCGTT+TGG | - | chr5_4:48688607-48688626 | Msa0855400:intron | 20.0% |
| !!! | ATAAAATAGTTTAAAACAGG+GGG | + | chr5_4:48689289-48689308 | None:intergenic | 20.0% |
| !! | GTGAATTAGATTAACTTAAT+TGG | - | chr5_4:48689490-48689509 | Msa0855400:intron | 20.0% |
| !! | AGTGTAAAAATTAATGAATG+TGG | + | chr5_4:48689598-48689617 | None:intergenic | 20.0% |
| !! | CAGATAGATTCTTTATAATA+AGG | - | chr5_4:48689751-48689770 | Msa0855400:intron | 20.0% |
| !! | TGACATGTTAACATTATAAT+AGG | - | chr5_4:48691052-48691071 | Msa0855400:CDS | 20.0% |
| !! | GACATGTTAACATTATAATA+GGG | - | chr5_4:48691053-48691072 | Msa0855400:CDS | 20.0% |
| !! | ACATGTTAACATTATAATAG+GGG | - | chr5_4:48691054-48691073 | Msa0855400:CDS | 20.0% |
| !!! | AATTTTATGTATAGCACATT+TGG | - | chr5_4:48691250-48691269 | Msa0855400:five_prime_UTR | 20.0% |
| !!! | TTTTGTTTGAAACAAGGTAA+TGG | + | chr5_4:48680785-48680804 | None:intergenic | 25.0% |
| ! | AAGAAAGAAAGAAACAAGAA+TGG | - | chr5_4:48680843-48680862 | Msa0855400:three_prime_UTR | 25.0% |
| ! | AAACAAACAAATTGGAACAA+GGG | + | chr5_4:48681106-48681125 | None:intergenic | 25.0% |
| ! | TAAACAAACAAATTGGAACA+AGG | + | chr5_4:48681107-48681126 | None:intergenic | 25.0% |
| ! | ACAATTGTTAACATTATGCT+GGG | + | chr5_4:48681481-48681500 | None:intergenic | 25.0% |
| ! | AACAATTGTTAACATTATGC+TGG | + | chr5_4:48681482-48681501 | None:intergenic | 25.0% |
| !!! | TTTTTTATCAGGGAGAAAAT+TGG | - | chr5_4:48681667-48681686 | Msa0855400:intron | 25.0% |
| !! | TTTTTATCAGGGAGAAAATT+GGG | - | chr5_4:48681668-48681687 | Msa0855400:intron | 25.0% |
| ! | TAATTCTAGATATTGTGAAG+TGG | - | chr5_4:48681770-48681789 | Msa0855400:intron | 25.0% |
| !!! | GAAGGTTTTTGATATTTTTG+CGG | - | chr5_4:48681945-48681964 | Msa0855400:intron | 25.0% |
| !!! | TAGAATTTTTTTTTATGCCG+CGG | - | chr5_4:48682047-48682066 | Msa0855400:intron | 25.0% |
| !!! | ATCCTTTTTCAACAATAAGA+GGG | - | chr5_4:48682244-48682263 | Msa0855400:intron | 25.0% |
| !!! | ACCAATGAGTTTTGTTTTTT+TGG | - | chr5_4:48682382-48682401 | Msa0855400:intron | 25.0% |
| ! | ACCAAAAAAACAAAACTCAT+TGG | + | chr5_4:48682386-48682405 | None:intergenic | 25.0% |
| ! | TATCTTGCTTTCTTAGTTAT+TGG | - | chr5_4:48682414-48682433 | Msa0855400:intron | 25.0% |
| !!! | TTATGATTTGCTTGCTATTT+TGG | - | chr5_4:48682526-48682545 | Msa0855400:intron | 25.0% |
| !!! | TGCTTTTATAAAAAGTGCAT+TGG | - | chr5_4:48682631-48682650 | Msa0855400:intron | 25.0% |
| !!! | GCTTTTATAAAAAGTGCATT+GGG | - | chr5_4:48682632-48682651 | Msa0855400:intron | 25.0% |
| ! | AGTACATCAAATAAGAATTG+GGG | - | chr5_4:48682713-48682732 | Msa0855400:intron | 25.0% |
| !!! | ATAACTAGTTCTTTTAGACT+TGG | + | chr5_4:48682828-48682847 | None:intergenic | 25.0% |
| ! | AAGGAGAAAAATACTAACAT+TGG | - | chr5_4:48682935-48682954 | Msa0855400:intron | 25.0% |
| ! | TAACAATTAGTTAACTAGAG+AGG | + | chr5_4:48683020-48683039 | None:intergenic | 25.0% |
| ! | AGCTTGTCATAATTTATAGA+AGG | + | chr5_4:48683111-48683130 | None:intergenic | 25.0% |
| ! | TCTATAAATTATGACAAGCT+TGG | - | chr5_4:48683111-48683130 | Msa0855400:intron | 25.0% |
| ! | TGGTAAATACCAAATAGTTA+TGG | - | chr5_4:48683205-48683224 | Msa0855400:intron | 25.0% |
| ! | TTCCTTTATAATTTACACTC+TGG | + | chr5_4:48683279-48683298 | None:intergenic | 25.0% |
| ! | AAATGTATGTATAGCTGTAT+AGG | + | chr5_4:48683414-48683433 | None:intergenic | 25.0% |
| ! | TAATTCATAAATTCTGGGTT+TGG | - | chr5_4:48683558-48683577 | Msa0855400:intron | 25.0% |
| ! | AAGTGATGACTTAAGAATAA+GGG | + | chr5_4:48684064-48684083 | None:intergenic | 25.0% |
| ! | AAAGTGATGACTTAAGAATA+AGG | + | chr5_4:48684065-48684084 | None:intergenic | 25.0% |
| ! | AAAATTGTCATAATAGAAGC+TGG | + | chr5_4:48684099-48684118 | None:intergenic | 25.0% |
| ! | AATTCCTTGTGTTATCATAA+TGG | - | chr5_4:48684231-48684250 | Msa0855400:intron | 25.0% |
| ! | ATCTGATAACTGTTGTATTT+GGG | - | chr5_4:48684940-48684959 | Msa0855400:intron | 25.0% |
| !!! | AATTTTACTTCTTTTGGCTT+TGG | - | chr5_4:48685063-48685082 | Msa0855400:CDS | 25.0% |
| !! | TGAAAGCATAAAAATCTTGT+AGG | + | chr5_4:48685627-48685646 | None:intergenic | 25.0% |
| ! | CTAAATAAGAAAGTTCAACA+AGG | + | chr5_4:48685673-48685692 | None:intergenic | 25.0% |
| ! | CCAAATATATAAACACAACA+GGG | + | chr5_4:48685832-48685851 | None:intergenic | 25.0% |
| ! | CCTGTTGTGTTTATATATTT+GGG | - | chr5_4:48685830-48685849 | Msa0855400:intron | 25.0% |
| !!! | CATTTTTAGTATACTTTGTG+AGG | + | chr5_4:48685937-48685956 | None:intergenic | 25.0% |
| ! | CAACAACAAATAAAAGAAGT+AGG | - | chr5_4:48686041-48686060 | Msa0855400:intron | 25.0% |
| !!! | TTTTAGCGTTTAAAACAGTT+TGG | - | chr5_4:48686447-48686466 | Msa0855400:intron | 25.0% |
| ! | CATTTAATATCCACCTTATT+AGG | - | chr5_4:48686688-48686707 | Msa0855400:intron | 25.0% |
| !!! | TTTTAGTGGATTTGAAAAGT+TGG | - | chr5_4:48686744-48686763 | Msa0855400:intron | 25.0% |
| !! | TTTCAGATCTGAAATATAAC+AGG | + | chr5_4:48686901-48686920 | None:intergenic | 25.0% |
| ! | TGCTTCAATATAATGAAAGA+CGG | + | chr5_4:48687072-48687091 | None:intergenic | 25.0% |
| ! | TCATTATATTGAAGCAGTAA+AGG | - | chr5_4:48687076-48687095 | Msa0855400:CDS | 25.0% |
| ! | ATAATGATATGAACTGTTGA+TGG | - | chr5_4:48687161-48687180 | Msa0855400:CDS | 25.0% |
| ! | TAATGATATGAACTGTTGAT+GGG | - | chr5_4:48687162-48687181 | Msa0855400:CDS | 25.0% |
| ! | AGTTGTACCTCTAATTTAAT+TGG | - | chr5_4:48687324-48687343 | Msa0855400:CDS | 25.0% |
| ! | TAAAAAAAAATAACGGCCAT+GGG | + | chr5_4:48687380-48687399 | None:intergenic | 25.0% |
| ! | TTAAAAAAAAATAACGGCCA+TGG | + | chr5_4:48687381-48687400 | None:intergenic | 25.0% |
| !!! | AAGTAATGGATTCTTTTGTA+GGG | - | chr5_4:48687451-48687470 | Msa0855400:CDS | 25.0% |
| !! | ATTTTTGTTCAAATTCGATC+AGG | - | chr5_4:48687563-48687582 | Msa0855400:intron | 25.0% |
| !! | TTTTTGTTCAAATTCGATCA+GGG | - | chr5_4:48687564-48687583 | Msa0855400:intron | 25.0% |
| ! | GTTATAGAAAGTAGAAACAT+TGG | + | chr5_4:48687637-48687656 | None:intergenic | 25.0% |
| ! | GAAAAATTCAACAAAAGTCT+TGG | + | chr5_4:48687700-48687719 | None:intergenic | 25.0% |
| !!! | TAAGCATGTTTTTTTTTTCC+TGG | - | chr5_4:48687887-48687906 | Msa0855400:intron | 25.0% |
| !!! | TCTCGATTCTTTTATTTCAA+TGG | - | chr5_4:48688483-48688502 | Msa0855400:intron | 25.0% |
| ! | GAAATAGAAACATCAAACTA+AGG | + | chr5_4:48688560-48688579 | None:intergenic | 25.0% |
| ! | AAAAAAAAAATGCAACTTGG+AGG | + | chr5_4:48688592-48688611 | None:intergenic | 25.0% |
| !! | AATATTGGGAAATAAGTTGA+AGG | + | chr5_4:48688670-48688689 | None:intergenic | 25.0% |
| ! | TATTTCCCAAACTATAACTT+GGG | + | chr5_4:48688887-48688906 | None:intergenic | 25.0% |
| ! | TATAAAATCAGAGATTAACG+AGG | + | chr5_4:48689360-48689379 | None:intergenic | 25.0% |
| !! | TAATTTTTACACTGTTCTCT+TGG | - | chr5_4:48689605-48689624 | Msa0855400:intron | 25.0% |
| ! | AGTGAGAAATTCAAGATAAT+AGG | - | chr5_4:48689717-48689736 | Msa0855400:intron | 25.0% |
| ! | GTGAGAAATTCAAGATAATA+GGG | - | chr5_4:48689718-48689737 | Msa0855400:intron | 25.0% |
| ! | TGAGAAATTCAAGATAATAG+GGG | - | chr5_4:48689719-48689738 | Msa0855400:intron | 25.0% |
| ! | ATAATAAGGAAAAACCATAG+AGG | - | chr5_4:48689765-48689784 | Msa0855400:intron | 25.0% |
| ! | TAATAAGGAAAAACCATAGA+GGG | - | chr5_4:48689766-48689785 | Msa0855400:intron | 25.0% |
| !! | TACGATTTTATGATTAAGTG+AGG | + | chr5_4:48689862-48689881 | None:intergenic | 25.0% |
| ! | CACTTAATCATAAAATCGTA+TGG | - | chr5_4:48689862-48689881 | Msa0855400:intron | 25.0% |
| ! | TTTATGACTCTAGTTATCAA+AGG | - | chr5_4:48689886-48689905 | Msa0855400:intron | 25.0% |
| ! | GCTTACAAAATTGTTAAACT+TGG | - | chr5_4:48689920-48689939 | Msa0855400:intron | 25.0% |
| ! | ATGCGAATCTATAAAAAAAC+TGG | + | chr5_4:48689946-48689965 | None:intergenic | 25.0% |
| ! | TGAACTAGTCAATAACATAA+TGG | - | chr5_4:48689988-48690007 | Msa0855400:intron | 25.0% |
| !! | GGTTTTCAAACAAAAAAACT+TGG | + | chr5_4:48690049-48690068 | None:intergenic | 25.0% |
| ! | AAAACTCATTAAATCTCCAT+AGG | + | chr5_4:48690201-48690220 | None:intergenic | 25.0% |
| !! | TGAATCAAAGTTTTCAAACA+TGG | + | chr5_4:48690231-48690250 | None:intergenic | 25.0% |
| ! | AAAACTTTGATTCAAACCAT+TGG | - | chr5_4:48690237-48690256 | Msa0855400:intron | 25.0% |
| ! | AAACTTTGATTCAAACCATT+GGG | - | chr5_4:48690238-48690257 | Msa0855400:intron | 25.0% |
| ! | CTTTGTCTGAATATACTTAT+TGG | - | chr5_4:48690388-48690407 | Msa0855400:intron | 25.0% |
| ! | TCTCAATCTGTTAATCAAAA+CGG | + | chr5_4:48690624-48690643 | None:intergenic | 25.0% |
| ! | ACATACTAAATTAACTGTAC+AGG | + | chr5_4:48690987-48691006 | None:intergenic | 25.0% |
| !! | TAACATTATAATAGGGGTTT+TGG | - | chr5_4:48691060-48691079 | Msa0855400:CDS | 25.0% |
| ! | TCTATCAAAAGAGAAAATAG+TGG | - | chr5_4:48691083-48691102 | Msa0855400:CDS | 25.0% |
| ! | ATCCTTTAGTGATGTTATAT+CGG | - | chr5_4:48691197-48691216 | Msa0855400:CDS | 25.0% |
| AACAAACAAATTGGAACAAG+GGG | + | chr5_4:48681105-48681124 | None:intergenic | 30.0% | |
| ! | TTGTAGCAATTGTTGTTGAA+GGG | - | chr5_4:48681154-48681173 | Msa0855400:three_prime_UTR | 30.0% |
| !! | TTAAACAAAACCTGTTTCTG+AGG | + | chr5_4:48681259-48681278 | None:intergenic | 30.0% |
| !!! | TCAGAAACAGGTTTTGTTTA+AGG | - | chr5_4:48681258-48681277 | Msa0855400:exon | 30.0% |
| !!! | CAGAAACAGGTTTTGTTTAA+GGG | - | chr5_4:48681259-48681278 | Msa0855400:exon | 30.0% |
| GAAACTGTATTAACCACTAT+TGG | + | chr5_4:48681807-48681826 | None:intergenic | 30.0% | |
| GCGGCATAAAAAAAAATTCT+AGG | + | chr5_4:48682048-48682067 | None:intergenic | 30.0% | |
| ! | TATCTAAGATCACAACAAGA+TGG | + | chr5_4:48682117-48682136 | None:intergenic | 30.0% |
| !!! | AAAATGATTTTTGGTCTCTG+CGG | + | chr5_4:48682198-48682217 | None:intergenic | 30.0% |
| CTCTTATTGTTGAAAAAGGA+TGG | + | chr5_4:48682245-48682264 | None:intergenic | 30.0% | |
| !!! | CATCCTTTTTCAACAATAAG+AGG | - | chr5_4:48682243-48682262 | Msa0855400:intron | 30.0% |
| AACCCTCTTATTGTTGAAAA+AGG | + | chr5_4:48682249-48682268 | None:intergenic | 30.0% | |
| !! | AGAGGGTTTTATGAAAAACT+TGG | - | chr5_4:48682261-48682280 | Msa0855400:intron | 30.0% |
| TTTGTAGGTTGTGTACAAAA+GGG | - | chr5_4:48682467-48682486 | Msa0855400:intron | 30.0% | |
| !!! | TCTGATTTAGCTTTTGGAAA+GGG | - | chr5_4:48682573-48682592 | Msa0855400:intron | 30.0% |
| !! | TTATTTCTGTTTGGTTCCTT+TGG | - | chr5_4:48682667-48682686 | Msa0855400:intron | 30.0% |
| ! | CTGTTTGATTTAGATTCCAA+AGG | + | chr5_4:48682686-48682705 | None:intergenic | 30.0% |
| ! | AAAAAACAGTACCGAACTAT+AGG | - | chr5_4:48682784-48682803 | Msa0855400:intron | 30.0% |
| ! | AAAAACAGTACCGAACTATA+GGG | - | chr5_4:48682785-48682804 | Msa0855400:intron | 30.0% |
| ! | AAAACGCTGGTTAGTATAAA+TGG | - | chr5_4:48683228-48683247 | Msa0855400:intron | 30.0% |
| ! | AAACGCTGGTTAGTATAAAT+GGG | - | chr5_4:48683229-48683248 | Msa0855400:intron | 30.0% |
| CACCAGAGTGTAAATTATAA+AGG | - | chr5_4:48683274-48683293 | Msa0855400:intron | 30.0% | |
| AGCATAAATAATAGGGGATA+TGG | + | chr5_4:48683322-48683341 | None:intergenic | 30.0% | |
| AGGGACAAGCATAAATAATA+GGG | + | chr5_4:48683329-48683348 | None:intergenic | 30.0% | |
| GATATGAATGTGTGAAAAGA+GGG | + | chr5_4:48683348-48683367 | None:intergenic | 30.0% | |
| TGATATGAATGTGTGAAAAG+AGG | + | chr5_4:48683349-48683368 | None:intergenic | 30.0% | |
| ACTCATGTGGAAAAAGTAAA+AGG | + | chr5_4:48683452-48683471 | None:intergenic | 30.0% | |
| GTTGAATATTGATGAACAAC+TGG | - | chr5_4:48683517-48683536 | Msa0855400:intron | 30.0% | |
| ! | TAGCAAACTAAAAGCACAAT+TGG | + | chr5_4:48684187-48684206 | None:intergenic | 30.0% |
| TTAAGTTAAAAAAGGACTCG+TGG | + | chr5_4:48684467-48684486 | None:intergenic | 30.0% | |
| ! | TCTCTTGAACCAGTATATTT+TGG | - | chr5_4:48684822-48684841 | Msa0855400:CDS | 30.0% |
| ! | CTCTTGAACCAGTATATTTT+GGG | - | chr5_4:48684823-48684842 | Msa0855400:CDS | 30.0% |
| GATCTGATAACTGTTGTATT+TGG | - | chr5_4:48684939-48684958 | Msa0855400:intron | 30.0% | |
| ! | ACTCCTTAAAAAGTCCTTTT+GGG | + | chr5_4:48684968-48684987 | None:intergenic | 30.0% |
| ! | TTGGATTGATTTATTGCTTG+TGG | - | chr5_4:48685082-48685101 | Msa0855400:CDS | 30.0% |
| ATCATTAGACTGCAAATTCA+AGG | - | chr5_4:48685110-48685129 | Msa0855400:CDS | 30.0% | |
| TCATTAGACTGCAAATTCAA+GGG | - | chr5_4:48685111-48685130 | Msa0855400:CDS | 30.0% | |
| ! | GCAAGTAAAAAGGTATAACT+TGG | + | chr5_4:48685234-48685253 | None:intergenic | 30.0% |
| CACAACAGCAATGAATAATA+AGG | + | chr5_4:48685466-48685485 | None:intergenic | 30.0% | |
| TAAGGAAAATGAGTCTAAAG+CGG | + | chr5_4:48685517-48685536 | None:intergenic | 30.0% | |
| ! | CTTTAGACTCATTTTCCTTA+TGG | - | chr5_4:48685517-48685536 | Msa0855400:intron | 30.0% |
| ! | ACTTTCTTATTTAGCAGAAG+TGG | - | chr5_4:48685679-48685698 | Msa0855400:intron | 30.0% |
| TCAGTTTCTTGAAAACAAAG+TGG | - | chr5_4:48685754-48685773 | Msa0855400:intron | 30.0% | |
| CCCTGTTGTGTTTATATATT+TGG | - | chr5_4:48685829-48685848 | Msa0855400:intron | 30.0% | |
| CCCAAATATATAAACACAAC+AGG | + | chr5_4:48685833-48685852 | None:intergenic | 30.0% | |
| CAAATAAAAGAAGTAGGACA+AGG | - | chr5_4:48686047-48686066 | Msa0855400:intron | 30.0% | |
| AGATATGCATAGCAGAATAA+TGG | - | chr5_4:48686168-48686187 | Msa0855400:intron | 30.0% | |
| GATATGCATAGCAGAATAAT+GGG | - | chr5_4:48686169-48686188 | Msa0855400:intron | 30.0% | |
| ! | ATGGTGGAACTTAGAAAATA+TGG | - | chr5_4:48686203-48686222 | Msa0855400:intron | 30.0% |
| AAAAGGAGGAAAACAAAACA+TGG | - | chr5_4:48686241-48686260 | Msa0855400:intron | 30.0% | |
| ! | CAGTTTTCTCAAGTATATCA+TGG | + | chr5_4:48686278-48686297 | None:intergenic | 30.0% |
| TTAATATCCACCTTATTAGG+TGG | - | chr5_4:48686691-48686710 | Msa0855400:intron | 30.0% | |
| !! | GCATAGTGGATTTGAAAAAT+CGG | - | chr5_4:48686861-48686880 | Msa0855400:intron | 30.0% |
| ! | CTTTGGTTCAGATGAAAAAT+TGG | - | chr5_4:48686952-48686971 | Msa0855400:intron | 30.0% |
| ! | AGATGAAAAATTGGTTCATG+CGG | - | chr5_4:48686961-48686980 | Msa0855400:intron | 30.0% |
| AATGATATGAACTGTTGATG+GGG | - | chr5_4:48687163-48687182 | Msa0855400:CDS | 30.0% | |
| !! | TCATATTTTTGTGTAGCTCA+CGG | - | chr5_4:48687214-48687233 | Msa0855400:CDS | 30.0% |
| GAATCCATTACTTCATAAAC+TGG | + | chr5_4:48687444-48687463 | None:intergenic | 30.0% | |
| !!! | GAAGTAATGGATTCTTTTGT+AGG | - | chr5_4:48687450-48687469 | Msa0855400:CDS | 30.0% |
| !!! | AGTAATGGATTCTTTTGTAG+GGG | - | chr5_4:48687452-48687471 | Msa0855400:CDS | 30.0% |
| CAAATAATGATGAGATACTG+AGG | + | chr5_4:48688007-48688026 | None:intergenic | 30.0% | |
| !! | CAATTTTGATGAGTATTCAC+TGG | + | chr5_4:48688165-48688184 | None:intergenic | 30.0% |
| AAAGGAGAAATAAATTCAGC+CGG | + | chr5_4:48688256-48688275 | None:intergenic | 30.0% | |
| !! | TTTTGTTTGGTGAAATGGAA+AGG | + | chr5_4:48688274-48688293 | None:intergenic | 30.0% |
| !! | AAATTGGTGCACTTTTTGTT+TGG | + | chr5_4:48688287-48688306 | None:intergenic | 30.0% |
| CAGTTGACACATACTTATTT+GGG | - | chr5_4:48688641-48688660 | Msa0855400:intron | 30.0% | |
| AGTTGACACATACTTATTTG+GGG | - | chr5_4:48688642-48688661 | Msa0855400:intron | 30.0% | |
| GTAATAAAAATGATGCTACG+AGG | + | chr5_4:48688853-48688872 | None:intergenic | 30.0% | |
| CTATTTCCCAAACTATAACT+TGG | + | chr5_4:48688888-48688907 | None:intergenic | 30.0% | |
| TGGTATTCTAATGTTAGTTC+TGG | - | chr5_4:48689109-48689128 | Msa0855400:intron | 30.0% | |
| TAACCTTGCTAATCTTATCA+AGG | - | chr5_4:48689433-48689452 | Msa0855400:intron | 30.0% | |
| TGGTATTAGTGATCTGATAT+AGG | - | chr5_4:48689510-48689529 | Msa0855400:intron | 30.0% | |
| AAAAAACTGACACATACATC+AGG | + | chr5_4:48689562-48689581 | None:intergenic | 30.0% | |
| !!! | TCAGTTTTTTAGCAGATCAA+AGG | - | chr5_4:48689572-48689591 | Msa0855400:intron | 30.0% |
| ! | GGAAACTTCAAATTTTTGTC+AGG | + | chr5_4:48689655-48689674 | None:intergenic | 30.0% |
| TTATCTTGAATTTCTCACTC+TGG | + | chr5_4:48689716-48689735 | None:intergenic | 30.0% | |
| !!! | ATGTGTGTTGATTTTATCCA+TGG | - | chr5_4:48689826-48689845 | Msa0855400:intron | 30.0% |
| ATGCATGCCTAAAATAACAA+TGG | - | chr5_4:48690023-48690042 | Msa0855400:intron | 30.0% | |
| !!! | AACTTGGCCATTGTTATTTT+AGG | + | chr5_4:48690033-48690052 | None:intergenic | 30.0% |
| ! | TCATTCAACTGTTGCATTTT+AGG | + | chr5_4:48690070-48690089 | None:intergenic | 30.0% |
| AATGCAACAGTTGAATGATA+AGG | - | chr5_4:48690072-48690091 | Msa0855400:intron | 30.0% | |
| TAGAAAACTGTAAGATCAAG+CGG | + | chr5_4:48690169-48690188 | None:intergenic | 30.0% | |
| ! | GCAGCTTTATACAAAGAATT+AGG | - | chr5_4:48690416-48690435 | Msa0855400:intron | 30.0% |
| TACAAAGAATTAGGAGAAAG+AGG | - | chr5_4:48690425-48690444 | Msa0855400:intron | 30.0% | |
| ATTTCCAACTCATGTAATTG+TGG | + | chr5_4:48690664-48690683 | None:intergenic | 30.0% | |
| ! | AATTACATGAGTTGGAAATC+AGG | - | chr5_4:48690665-48690684 | Msa0855400:intron | 30.0% |
| !! | ATATCAACTAGCATTGATGA+TGG | + | chr5_4:48690772-48690791 | None:intergenic | 30.0% |
| ! | TCAATGCTAGTTGATATAGA+TGG | - | chr5_4:48690775-48690794 | Msa0855400:intron | 30.0% |
| ! | AGAATTTAGTGTTTTCCTCA+TGG | - | chr5_4:48690823-48690842 | Msa0855400:CDS | 30.0% |
| TATTATAGGTGATTGCTCTA+AGG | - | chr5_4:48690877-48690896 | Msa0855400:CDS | 30.0% | |
| AAAAGAGAAAATAGTGGTGT+AGG | - | chr5_4:48691089-48691108 | Msa0855400:CDS | 30.0% | |
| TTCCGATATAACATCACTAA+AGG | + | chr5_4:48691202-48691221 | None:intergenic | 30.0% | |
| ATATTGCATTGCAGTAAACT+AGG | + | chr5_4:48691341-48691360 | None:intergenic | 30.0% | |
| !! | AACAAGGTAATGGAGTCAAT+GGG | + | chr5_4:48680775-48680794 | None:intergenic | 35.0% |
| !! | AAACAAGGTAATGGAGTCAA+TGG | + | chr5_4:48680776-48680795 | None:intergenic | 35.0% |
| !!! | GAGTTTTGACTTCAACGATT+GGG | + | chr5_4:48680981-48681000 | None:intergenic | 35.0% |
| TTTAGCGTGATTAGCGTTAT+GGG | + | chr5_4:48681037-48681056 | None:intergenic | 35.0% | |
| ATTTAGCGTGATTAGCGTTA+TGG | + | chr5_4:48681038-48681057 | None:intergenic | 35.0% | |
| ! | GTTGTAGCAATTGTTGTTGA+AGG | - | chr5_4:48681153-48681172 | Msa0855400:three_prime_UTR | 35.0% |
| CACTTCAACTCAAAACAAGA+CGG | + | chr5_4:48681184-48681203 | None:intergenic | 35.0% | |
| AGTCAGTGTTATCATCTTGT+TGG | - | chr5_4:48681223-48681242 | Msa0855400:three_prime_UTR | 35.0% | |
| !!! | TCGCTAGCTTTTTTATACTG+AGG | - | chr5_4:48681565-48681584 | Msa0855400:CDS | 35.0% |
| !!! | CGCTAGCTTTTTTATACTGA+GGG | - | chr5_4:48681566-48681585 | Msa0855400:CDS | 35.0% |
| TCCCCAATTTGAAAATGTCA+AGG | - | chr5_4:48681630-48681649 | Msa0855400:CDS | 35.0% | |
| ! | CCCTTGACATTTTCAAATTG+GGG | + | chr5_4:48681634-48681653 | None:intergenic | 35.0% |
| CCCCAATTTGAAAATGTCAA+GGG | - | chr5_4:48681631-48681650 | Msa0855400:CDS | 35.0% | |
| ! | GCCCTTGACATTTTCAAATT+GGG | + | chr5_4:48681635-48681654 | None:intergenic | 35.0% |
| ! | AGCCCTTGACATTTTCAAAT+TGG | + | chr5_4:48681636-48681655 | None:intergenic | 35.0% |
| GGTTAATACAGTTTCAGTCA+TGG | - | chr5_4:48681812-48681831 | Msa0855400:intron | 35.0% | |
| ! | TTTGTGCTTTGTTCAACAGT+AGG | - | chr5_4:48681879-48681898 | Msa0855400:intron | 35.0% |
| ! | TTGTGCTTTGTTCAACAGTA+GGG | - | chr5_4:48681880-48681899 | Msa0855400:intron | 35.0% |
| CAATTTCGACTGTGATATGA+AGG | - | chr5_4:48681927-48681946 | Msa0855400:intron | 35.0% | |
| !!! | TCATTTTCTAAAACCCCGAT+AGG | - | chr5_4:48682088-48682107 | Msa0855400:intron | 35.0% |
| !! | TGTGGTTGATACAGTTTTAG+TGG | - | chr5_4:48682158-48682177 | Msa0855400:intron | 35.0% |
| ! | TTTTAGTGGCAGTCAAATTG+CGG | - | chr5_4:48682172-48682191 | Msa0855400:intron | 35.0% |
| AAAGGATGGTATTCCATTCA+AGG | + | chr5_4:48682231-48682250 | None:intergenic | 35.0% | |
| AAAACTTGGCAACCACAATT+TGG | - | chr5_4:48682275-48682294 | Msa0855400:intron | 35.0% | |
| AAACTTGGCAACCACAATTT+GGG | - | chr5_4:48682276-48682295 | Msa0855400:intron | 35.0% | |
| GATTGATCAATCCTCATTTG+TGG | - | chr5_4:48682436-48682455 | Msa0855400:intron | 35.0% | |
| AAAGCTATTGTCCACAAATG+AGG | + | chr5_4:48682450-48682469 | None:intergenic | 35.0% | |
| !! | TTTGTGGACAATAGCTTTGT+AGG | - | chr5_4:48682452-48682471 | Msa0855400:intron | 35.0% |
| CTTTGTAGGTTGTGTACAAA+AGG | - | chr5_4:48682466-48682485 | Msa0855400:intron | 35.0% | |
| !!! | AGCATGTCTGATTTAGCTTT+TGG | - | chr5_4:48682567-48682586 | Msa0855400:intron | 35.0% |
| !!! | GTCTGATTTAGCTTTTGGAA+AGG | - | chr5_4:48682572-48682591 | Msa0855400:intron | 35.0% |
| !!! | CTGATTTAGCTTTTGGAAAG+GGG | - | chr5_4:48682574-48682593 | Msa0855400:intron | 35.0% |
| !! | ACTAGTTCTTTTAGACTTGG+AGG | + | chr5_4:48682825-48682844 | None:intergenic | 35.0% |
| ATTAGTTACTCTGTGAGAGA+TGG | - | chr5_4:48682849-48682868 | Msa0855400:intron | 35.0% | |
| TTAGTTACTCTGTGAGAGAT+GGG | - | chr5_4:48682850-48682869 | Msa0855400:intron | 35.0% | |
| TTTAAACCCTTAGCTCAAAC+CGG | + | chr5_4:48682884-48682903 | None:intergenic | 35.0% | |
| GAGCTAAGGGTTTAAAGAAT+TGG | - | chr5_4:48682888-48682907 | Msa0855400:intron | 35.0% | |
| CTAAGGGTTTAAAGAATTGG+AGG | - | chr5_4:48682891-48682910 | Msa0855400:intron | 35.0% | |
| ATTAGTTAACTAGAGAGGCA+GGG | + | chr5_4:48683015-48683034 | None:intergenic | 35.0% | |
| AATTAGTTAACTAGAGAGGC+AGG | + | chr5_4:48683016-48683035 | None:intergenic | 35.0% | |
| !! | TACTGCCATACTTTTAACTG+AGG | - | chr5_4:48683038-48683057 | Msa0855400:intron | 35.0% |
| ! | CAGCGTTTTCCATAACTATT+TGG | + | chr5_4:48683217-48683236 | None:intergenic | 35.0% |
| CAAATAGTTATGGAAAACGC+TGG | - | chr5_4:48683215-48683234 | Msa0855400:intron | 35.0% | |
| GGGACAAGCATAAATAATAG+GGG | + | chr5_4:48683328-48683347 | None:intergenic | 35.0% | |
| GAGGGACAAGCATAAATAAT+AGG | + | chr5_4:48683330-48683349 | None:intergenic | 35.0% | |
| ATCAGACACAAATACTCATG+TGG | + | chr5_4:48683465-48683484 | None:intergenic | 35.0% | |
| AACATGCAATGCAGTCAAAT+TGG | + | chr5_4:48683635-48683654 | None:intergenic | 35.0% | |
| GAAGGATTTCAACAAAGTTG+TGG | - | chr5_4:48683678-48683697 | Msa0855400:intron | 35.0% | |
| GCAAATGCTTTGTCAATTGA+AGG | - | chr5_4:48683725-48683744 | Msa0855400:intron | 35.0% | |
| TCTATGCAAAGAGCAAAGAA+GGG | + | chr5_4:48683867-48683886 | None:intergenic | 35.0% | |
| ATCTATGCAAAGAGCAAAGA+AGG | + | chr5_4:48683868-48683887 | None:intergenic | 35.0% | |
| AACTAATACGTAGAACCTTC+TGG | - | chr5_4:48683911-48683930 | Msa0855400:intron | 35.0% | |
| TTAAAGACAAAGCTTCCAGA+AGG | + | chr5_4:48683929-48683948 | None:intergenic | 35.0% | |
| !!! | AAAGGTCATTTTAGGGCTTT+TGG | + | chr5_4:48683956-48683975 | None:intergenic | 35.0% |
| AAGAATAAGGGAAGGAGAAA+AGG | + | chr5_4:48684052-48684071 | None:intergenic | 35.0% | |
| GATGACTTAAGAATAAGGGA+AGG | + | chr5_4:48684060-48684079 | None:intergenic | 35.0% | |
| TGGTCCATTATGATAACACA+AGG | + | chr5_4:48684238-48684257 | None:intergenic | 35.0% | |
| GCAATGGGATGATGATAATT+TGG | - | chr5_4:48684297-48684316 | Msa0855400:intron | 35.0% | |
| ACATTTGCACTCACTTTATC+TGG | + | chr5_4:48684370-48684389 | None:intergenic | 35.0% | |
| CATTATAAAAGAGCAAGCCA+GGG | + | chr5_4:48684539-48684558 | None:intergenic | 35.0% | |
| TCATTATAAAAGAGCAAGCC+AGG | + | chr5_4:48684540-48684559 | None:intergenic | 35.0% | |
| TCTTAGATCAAAGTCTTTCC+AGG | - | chr5_4:48684697-48684716 | Msa0855400:intron | 35.0% | |
| AACAGCTGAGAAACATGAAT+GGG | - | chr5_4:48684778-48684797 | Msa0855400:intron | 35.0% | |
| ! | ATGAATGGGTTCAGTTCAAT+TGG | - | chr5_4:48684792-48684811 | Msa0855400:CDS | 35.0% |
| ! | TGAATGGGTTCAGTTCAATT+GGG | - | chr5_4:48684793-48684812 | Msa0855400:CDS | 35.0% |
| !! | GAACCAGTATATTTTGGGAA+TGG | - | chr5_4:48684828-48684847 | Msa0855400:CDS | 35.0% |
| !! | TATATTTTGGGAATGGCAGA+AGG | - | chr5_4:48684835-48684854 | Msa0855400:CDS | 35.0% |
| ! | AGTGCATAGATAGCACTTTT+AGG | + | chr5_4:48684915-48684934 | None:intergenic | 35.0% |
| ! | CACTCCTTAAAAAGTCCTTT+TGG | + | chr5_4:48684969-48684988 | None:intergenic | 35.0% |
| !! | AAAGGACTTTTTAAGGAGTG+TGG | - | chr5_4:48684969-48684988 | Msa0855400:intron | 35.0% |
| ! | CAGTGAAAGTGCAAGTAAAA+AGG | + | chr5_4:48685244-48685263 | None:intergenic | 35.0% |
| GGTTGGACATATAGAATATC+TGG | + | chr5_4:48685287-48685306 | None:intergenic | 35.0% | |
| !!! | TGTCTTTTCTGTTGGTTTCT+AGG | - | chr5_4:48685319-48685338 | Msa0855400:intron | 35.0% |
| GATCAGTAGCATAACTCATT+TGG | - | chr5_4:48685376-48685395 | Msa0855400:intron | 35.0% | |
| ! | GTTTCTGTTATTTGCGCAAA+TGG | - | chr5_4:48685436-48685455 | Msa0855400:intron | 35.0% |
| TTGAAGCTTGGAATTACTGA+TGG | - | chr5_4:48685569-48685588 | Msa0855400:intron | 35.0% | |
| AATAGCATTGCTTGTCCATA+GGG | + | chr5_4:48685878-48685897 | None:intergenic | 35.0% | |
| TAATAGCATTGCTTGTCCAT+AGG | + | chr5_4:48685879-48685898 | None:intergenic | 35.0% | |
| TGGACAAGCAATGCTATTAA+CGG | - | chr5_4:48685880-48685899 | Msa0855400:intron | 35.0% | |
| ATGCTATTAACGGCTTATTG+TGG | - | chr5_4:48685890-48685909 | Msa0855400:intron | 35.0% | |
| TTATTGTGGTTCATGATGAC+AGG | - | chr5_4:48685904-48685923 | Msa0855400:intron | 35.0% | |
| ! | ATAATGGGACAAGAAAGGAA+TGG | - | chr5_4:48686184-48686203 | Msa0855400:intron | 35.0% |
| CTTGAGAAAACTGAAGTCAT+TGG | - | chr5_4:48686285-48686304 | Msa0855400:CDS | 35.0% | |
| TTTACACTCAACTCACTGAA+TGG | + | chr5_4:48686421-48686440 | None:intergenic | 35.0% | |
| ! | CAGTGAGTTGAGTGTAAAAT+AGG | - | chr5_4:48686423-48686442 | Msa0855400:intron | 35.0% |
| GTAAGTCACTATTTCCATGA+CGG | + | chr5_4:48686524-48686543 | None:intergenic | 35.0% | |
| ATGACCGTCATTTAAGAATG+AGG | - | chr5_4:48686611-48686630 | Msa0855400:intron | 35.0% | |
| TGACCGTCATTTAAGAATGA+GGG | - | chr5_4:48686612-48686631 | Msa0855400:intron | 35.0% | |
| TCACATGGCTGTAATATAGT+CGG | + | chr5_4:48686990-48687009 | None:intergenic | 35.0% | |
| ATCTCAATGATGCATTCACA+TGG | + | chr5_4:48687005-48687024 | None:intergenic | 35.0% | |
| ! | TGTTGATGGGGATAACTTAA+TGG | - | chr5_4:48687175-48687194 | Msa0855400:CDS | 35.0% |
| AAGAAACAGCTGCATAAACT+TGG | + | chr5_4:48687265-48687284 | None:intergenic | 35.0% | |
| !! | GCTGTTTCTTATATCTGCAT+TGG | - | chr5_4:48687275-48687294 | Msa0855400:CDS | 35.0% |
| TGATGCTGAATCTAATTCAC+AGG | - | chr5_4:48687298-48687317 | Msa0855400:CDS | 35.0% | |
| AGTAGCGCCAATTAAATTAG+AGG | + | chr5_4:48687334-48687353 | None:intergenic | 35.0% | |
| !!! | CTACTTACTTTTTCTAACGC+AGG | - | chr5_4:48687349-48687368 | Msa0855400:CDS | 35.0% |
| ! | TCAAAACATATTTTGCCTGC+AGG | - | chr5_4:48687401-48687420 | Msa0855400:CDS | 35.0% |
| AACAAGATCTACAAGAAGCA+AGG | - | chr5_4:48687526-48687545 | Msa0855400:CDS | 35.0% | |
| ! | ATGCCAGTTCAATAGTTTTC+TGG | + | chr5_4:48688132-48688151 | None:intergenic | 35.0% |
| TATTGAACTGGCATCATATC+TGG | - | chr5_4:48688138-48688157 | Msa0855400:intron | 35.0% | |
| GCCAGATTTAGTATTTGACT+GGG | + | chr5_4:48688209-48688228 | None:intergenic | 35.0% | |
| AGCCAGATTTAGTATTTGAC+TGG | + | chr5_4:48688210-48688229 | None:intergenic | 35.0% | |
| ACCAGCCAAATCATTTAAAC+CGG | - | chr5_4:48688234-48688253 | Msa0855400:intron | 35.0% | |
| ! | TTCAGCCGGTTTAAATGATT+TGG | + | chr5_4:48688242-48688261 | None:intergenic | 35.0% |
| !! | GCACTTTTTGTTTGGTGAAA+TGG | + | chr5_4:48688279-48688298 | None:intergenic | 35.0% |
| GCAGTTGACACATACTTATT+TGG | - | chr5_4:48688640-48688659 | Msa0855400:intron | 35.0% | |
| TCCCAATATTTAACAACCCT+TGG | - | chr5_4:48688680-48688699 | Msa0855400:intron | 35.0% | |
| GCCAAGGGTTGTTAAATATT+GGG | + | chr5_4:48688684-48688703 | None:intergenic | 35.0% | |
| TGCCAAGGGTTGTTAAATAT+TGG | + | chr5_4:48688685-48688704 | None:intergenic | 35.0% | |
| AATGTGCCCAAGTTATAGTT+TGG | - | chr5_4:48688878-48688897 | Msa0855400:intron | 35.0% | |
| ATGTGCCCAAGTTATAGTTT+GGG | - | chr5_4:48688879-48688898 | Msa0855400:intron | 35.0% | |
| ACTGCAAGAAATGAAAGACA+CGG | + | chr5_4:48688951-48688970 | None:intergenic | 35.0% | |
| !! | AAATGTTGTTTAAGAGTGCC+TGG | - | chr5_4:48688994-48689013 | Msa0855400:intron | 35.0% |
| ! | TCTTTTATCTCTGAACTGCA+TGG | - | chr5_4:48689033-48689052 | Msa0855400:intron | 35.0% |
| ! | CTTTTATCTCTGAACTGCAT+GGG | - | chr5_4:48689034-48689053 | Msa0855400:intron | 35.0% |
| TGTTTGAGTATTACTCTGCA+TGG | - | chr5_4:48689089-48689108 | Msa0855400:intron | 35.0% | |
| GTGTAGATTTCCTGAATCAA+GGG | + | chr5_4:48689164-48689183 | None:intergenic | 35.0% | |
| TGTGTAGATTTCCTGAATCA+AGG | + | chr5_4:48689165-48689184 | None:intergenic | 35.0% | |
| ! | TGGGGAAAACTATGTGTTTT+AGG | + | chr5_4:48689236-48689255 | None:intergenic | 35.0% |
| AAAAGGATTATCCTACGAGT+GGG | + | chr5_4:48689255-48689274 | None:intergenic | 35.0% | |
| AAAAAGGATTATCCTACGAG+TGG | + | chr5_4:48689256-48689275 | None:intergenic | 35.0% | |
| ! | ACTCGTAGGATAATCCTTTT+TGG | - | chr5_4:48689255-48689274 | Msa0855400:intron | 35.0% |
| ! | AATAGTTTAAAACAGGGGGA+GGG | + | chr5_4:48689285-48689304 | None:intergenic | 35.0% |
| ! | AAATAGTTTAAAACAGGGGG+AGG | + | chr5_4:48689286-48689305 | None:intergenic | 35.0% |
| CTTCCTTGATAAGATTAGCA+AGG | + | chr5_4:48689439-48689458 | None:intergenic | 35.0% | |
| TATAGGTCTGTAGATTCTGT+AGG | - | chr5_4:48689527-48689546 | Msa0855400:intron | 35.0% | |
| ATAGGTCTGTAGATTCTGTA+GGG | - | chr5_4:48689528-48689547 | Msa0855400:intron | 35.0% | |
| TTCACAAAACATTCCCTCTA+TGG | + | chr5_4:48689782-48689801 | None:intergenic | 35.0% | |
| TCGCATAGAATCAAAAGTTG+AGG | - | chr5_4:48689960-48689979 | Msa0855400:intron | 35.0% | |
| CGCATAGAATCAAAAGTTGA+GGG | - | chr5_4:48689961-48689980 | Msa0855400:intron | 35.0% | |
| AGTTGAATGATAAGGCTAAG+TGG | - | chr5_4:48690080-48690099 | Msa0855400:intron | 35.0% | |
| AGAAAACTGTAAGATCAAGC+GGG | + | chr5_4:48690168-48690187 | None:intergenic | 35.0% | |
| ! | TTTTCTACGATTTGAGCCTA+TGG | - | chr5_4:48690182-48690201 | Msa0855400:intron | 35.0% |
| GTATCTATACAGGACTAACT+CGG | - | chr5_4:48690264-48690283 | Msa0855400:intron | 35.0% | |
| AGGAGAAAGAGGAAATGAAT+TGG | - | chr5_4:48690436-48690455 | Msa0855400:intron | 35.0% | |
| AGTTCCACAATTACATGAGT+TGG | - | chr5_4:48690657-48690676 | Msa0855400:intron | 35.0% | |
| AGATTATTAACTCCCATGCT+TGG | + | chr5_4:48690706-48690725 | None:intergenic | 35.0% | |
| !! | AACTAGCATTGATGATGGAA+CGG | + | chr5_4:48690767-48690786 | None:intergenic | 35.0% |
| ! | CTAGTTGATATAGATGGTAG+TGG | - | chr5_4:48690781-48690800 | Msa0855400:CDS | 35.0% |
| TTTCCTCATGGAAGTTAATC+CGG | - | chr5_4:48690835-48690854 | Msa0855400:CDS | 35.0% | |
| ACTCATTAAGTTACATGAGC+AGG | - | chr5_4:48691007-48691026 | Msa0855400:intron | 35.0% | |
| ! | AATAGTGGTGTAGGTTTTCA+AGG | - | chr5_4:48691098-48691117 | Msa0855400:CDS | 35.0% |
| !! | ACAAGGTAATGGAGTCAATG+GGG | + | chr5_4:48680774-48680793 | None:intergenic | 40.0% |
| AGAATGGAAGCAATAGCAGA+AGG | - | chr5_4:48680859-48680878 | Msa0855400:three_prime_UTR | 40.0% | |
| AAGCAATAGCAGAAGGACTA+TGG | - | chr5_4:48680866-48680885 | Msa0855400:three_prime_UTR | 40.0% | |
| AGCAATAGCAGAAGGACTAT+GGG | - | chr5_4:48680867-48680886 | Msa0855400:three_prime_UTR | 40.0% | |
| ! | TTTCTCCTCGGTTTTCATGA+TGG | + | chr5_4:48680903-48680922 | None:intergenic | 40.0% |
| AAACCGAGGAGAAATAGCAA+AGG | - | chr5_4:48680909-48680928 | Msa0855400:three_prime_UTR | 40.0% | |
| !!! | CGAGTTTTGACTTCAACGAT+TGG | + | chr5_4:48680982-48681001 | None:intergenic | 40.0% |
| GGAATGATGAAGAAGGATTG+TGG | + | chr5_4:48681016-48681035 | None:intergenic | 40.0% | |
| CGTTATGGGAATGATGAAGA+AGG | + | chr5_4:48681023-48681042 | None:intergenic | 40.0% | |
| TGATACTAACACAACGTTCG+AGG | + | chr5_4:48681065-48681084 | None:intergenic | 40.0% | |
| AACAAATTGGAACAAGGGGT+GGG | + | chr5_4:48681101-48681120 | None:intergenic | 40.0% | |
| AAACAAATTGGAACAAGGGG+TGG | + | chr5_4:48681102-48681121 | None:intergenic | 40.0% | |
| AGCTATTCAACCTCAGAAAC+AGG | - | chr5_4:48681246-48681265 | Msa0855400:three_prime_UTR | 40.0% | |
| !! | ACAAAGTTGGTTTGCTGGTT+AGG | - | chr5_4:48681397-48681416 | Msa0855400:CDS | 40.0% |
| TAGGATGAGTAGTTAACGAG+TGG | - | chr5_4:48681416-48681435 | Msa0855400:CDS | 40.0% | |
| AGTTAACGAGTGGAGTGATA+AGG | - | chr5_4:48681426-48681445 | Msa0855400:CDS | 40.0% | |
| TTAACATTATGCTGGGAGTG+AGG | + | chr5_4:48681474-48681493 | None:intergenic | 40.0% | |
| !! | GAAAATGTCAAGGGCTAGTT+TGG | - | chr5_4:48681640-48681659 | Msa0855400:CDS | 40.0% |
| GGAAAGTCATTGTCCAATAG+TGG | - | chr5_4:48681791-48681810 | Msa0855400:intron | 40.0% | |
| !! | AAAAAAGGCGTCTTTGAGCA+AGG | + | chr5_4:48682014-48682033 | None:intergenic | 40.0% |
| AATGACCAAAACCGCTATCT+GGG | + | chr5_4:48682073-48682092 | None:intergenic | 40.0% | |
| AAATGACCAAAACCGCTATC+TGG | + | chr5_4:48682074-48682093 | None:intergenic | 40.0% | |
| ACAACAAGATGGAGACCTAT+CGG | + | chr5_4:48682106-48682125 | None:intergenic | 40.0% | |
| CGCAGAATTGCAATCAAATG+TGG | - | chr5_4:48682140-48682159 | Msa0855400:intron | 40.0% | |
| TGATACAGCAACCCAAATTG+TGG | + | chr5_4:48682290-48682309 | None:intergenic | 40.0% | |
| CCTTCTGTATCCCTATAGTT+CGG | + | chr5_4:48682798-48682817 | None:intergenic | 40.0% | |
| ! | AGTTCTTTTAGACTTGGAGG+AGG | + | chr5_4:48682822-48682841 | None:intergenic | 40.0% |
| AGAGAGAGTGAATGTTAGGA+AGG | + | chr5_4:48682982-48683001 | None:intergenic | 40.0% | |
| GCAGACCTCAGTTAAAAGTA+TGG | + | chr5_4:48683046-48683065 | None:intergenic | 40.0% | |
| CAGTAGCTGTAGCATGTATA+TGG | - | chr5_4:48683185-48683204 | Msa0855400:intron | 40.0% | |
| TGTCAATTGAAGGAGACTAC+CGG | - | chr5_4:48683735-48683754 | Msa0855400:intron | 40.0% | |
| ACAGGCATATCCACATTCTA+AGG | + | chr5_4:48683773-48683792 | None:intergenic | 40.0% | |
| AGTTGCAGGTTAGTAGTGAA+AGG | - | chr5_4:48683815-48683834 | Msa0855400:intron | 40.0% | |
| AGGAATTACAGACAGTCAGA+TGG | + | chr5_4:48684218-48684237 | None:intergenic | 40.0% | |
| ATGAAGTGGCAAAGAACATC+TGG | + | chr5_4:48684258-48684277 | None:intergenic | 40.0% | |
| TATCATCATCCCATTGCATG+AGG | + | chr5_4:48684294-48684313 | None:intergenic | 40.0% | |
| AGGATTGTGTGGAAGCAAAA+AGG | + | chr5_4:48684502-48684521 | None:intergenic | 40.0% | |
| TGCACATATTCTATCGTACG+CGG | - | chr5_4:48684565-48684584 | Msa0855400:CDS | 40.0% | |
| AGCATCCAGATTGTCAACAT+GGG | + | chr5_4:48684616-48684635 | None:intergenic | 40.0% | |
| ACATATGCAAGAGCTAGTGA+AGG | - | chr5_4:48684665-48684684 | Msa0855400:intron | 40.0% | |
| TGATCTTCACTACAGGGAAA+GGG | - | chr5_4:48684722-48684741 | Msa0855400:intron | 40.0% | |
| GAACAGCTGAGAAACATGAA+TGG | - | chr5_4:48684777-48684796 | Msa0855400:intron | 40.0% | |
| CTGCCATTCCCAAAATATAC+TGG | + | chr5_4:48684834-48684853 | None:intergenic | 40.0% | |
| CCAACAGAAAAGACATTCCA+CGG | + | chr5_4:48685314-48685333 | None:intergenic | 40.0% | |
| CTAAAGCGGCAAGAATTACT+CGG | + | chr5_4:48685503-48685522 | None:intergenic | 40.0% | |
| GCAGATGAGTTATTGAAGCT+TGG | - | chr5_4:48685557-48685576 | Msa0855400:intron | 40.0% | |
| TGTATATTGTGTGAGCCCTA+TGG | - | chr5_4:48685860-48685879 | Msa0855400:intron | 40.0% | |
| ! | GCAGAATAATGGGACAAGAA+AGG | - | chr5_4:48686179-48686198 | Msa0855400:intron | 40.0% |
| AAACTGAAGTCATTGGCGAT+AGG | - | chr5_4:48686292-48686311 | Msa0855400:CDS | 40.0% | |
| ! | ATGTGCTGTTCACCAAAGAT+GGG | - | chr5_4:48686328-48686347 | Msa0855400:CDS | 40.0% |
| ATCTCTCAATTGCCCATCTT+TGG | + | chr5_4:48686343-48686362 | None:intergenic | 40.0% | |
| TGAGAGATGATAGAGATGTG+TGG | - | chr5_4:48686355-48686374 | Msa0855400:CDS | 40.0% | |
| GAGAGATGATAGAGATGTGT+GGG | - | chr5_4:48686356-48686375 | Msa0855400:CDS | 40.0% | |
| ! | AGAGAAGTGCAAGTGATAGA+TGG | - | chr5_4:48686390-48686409 | Msa0855400:intron | 40.0% |
| ! | ATGGCTTCAAAGTGGCATTT+TGG | - | chr5_4:48686563-48686582 | Msa0855400:intron | 40.0% |
| AAATGACGGTCATGAGAGAA+TGG | + | chr5_4:48686604-48686623 | None:intergenic | 40.0% | |
| CCACCCTCATTCTTAAATGA+CGG | + | chr5_4:48686618-48686637 | None:intergenic | 40.0% | |
| CGTCATTTAAGAATGAGGGT+GGG | - | chr5_4:48686616-48686635 | Msa0855400:intron | 40.0% | |
| ! | GCATTCTGTGCAAGTTTTCA+GGG | - | chr5_4:48686813-48686832 | Msa0855400:intron | 40.0% |
| TGGCATTCTGTGCAAATTTC+AGG | - | chr5_4:48686929-48686948 | Msa0855400:intron | 40.0% | |
| TCTGTGCAAATTTCAGGCTT+TGG | - | chr5_4:48686935-48686954 | Msa0855400:intron | 40.0% | |
| TGCATCATTGAGATGCTAAG+AGG | - | chr5_4:48687011-48687030 | Msa0855400:intron | 40.0% | |
| AGCCAACAGAATGAGCATAT+TGG | + | chr5_4:48687037-48687056 | None:intergenic | 40.0% | |
| ! | GAAGCAGTAAAGGTACATAC+AGG | - | chr5_4:48687086-48687105 | Msa0855400:CDS | 40.0% |
| !!! | CTTACTTTTTCTAACGCAGG+TGG | - | chr5_4:48687352-48687371 | Msa0855400:CDS | 40.0% |
| ! | TGCAGGCACTTGATTTGATT+GGG | - | chr5_4:48687418-48687437 | Msa0855400:CDS | 40.0% |
| TGGGCCAGTTTATGAAGTAA+TGG | - | chr5_4:48687437-48687456 | Msa0855400:CDS | 40.0% | |
| ACTGGTGTTCTCTTTGCTTA+CGG | - | chr5_4:48687486-48687505 | Msa0855400:CDS | 40.0% | |
| ! | TTCGATCAGGGTTTTCTGTT+TGG | - | chr5_4:48687576-48687595 | Msa0855400:intron | 40.0% |
| ! | TCGATCAGGGTTTTCTGTTT+GGG | - | chr5_4:48687577-48687596 | Msa0855400:intron | 40.0% |
| ! | CCAGTTCAATAGTTTTCTGG+TGG | + | chr5_4:48688129-48688148 | None:intergenic | 40.0% |
| CCACCAGAAAACTATTGAAC+TGG | - | chr5_4:48688126-48688145 | Msa0855400:intron | 40.0% | |
| GCCCAGTCAAATACTAAATC+TGG | - | chr5_4:48688205-48688224 | Msa0855400:intron | 40.0% | |
| ATGCACTGTATAGCACGTTA+GGG | + | chr5_4:48688316-48688335 | None:intergenic | 40.0% | |
| GAGAGTCAATAGTTAGACTG+GGG | + | chr5_4:48688467-48688486 | None:intergenic | 40.0% | |
| CGAGAGTCAATAGTTAGACT+GGG | + | chr5_4:48688468-48688487 | None:intergenic | 40.0% | |
| TCGAGAGTCAATAGTTAGAC+TGG | + | chr5_4:48688469-48688488 | None:intergenic | 40.0% | |
| AAATGCAACTTGGAGGAAAG+AGG | + | chr5_4:48688585-48688604 | None:intergenic | 40.0% | |
| TTGTAGAATTCGTTTGGCGA+AGG | - | chr5_4:48688613-48688632 | Msa0855400:intron | 40.0% | |
| TGTAGAATTCGTTTGGCGAA+GGG | - | chr5_4:48688614-48688633 | Msa0855400:intron | 40.0% | |
| TTTAACAACCCTTGGCAGTT+TGG | - | chr5_4:48688688-48688707 | Msa0855400:intron | 40.0% | |
| TACAGTGTCACGCAATACAA+TGG | + | chr5_4:48688714-48688733 | None:intergenic | 40.0% | |
| ! | TTTGAGATCGTCTTTGACCT+TGG | - | chr5_4:48688748-48688767 | Msa0855400:intron | 40.0% |
| AGGAACATCACAAAGCTTCT+TGG | + | chr5_4:48688774-48688793 | None:intergenic | 40.0% | |
| TGATGTTCCTTCTCAAGTCT+GGG | - | chr5_4:48688784-48688803 | Msa0855400:intron | 40.0% | |
| ! | TCTTGCAGTTTTCTCTGTTC+TGG | - | chr5_4:48688962-48688981 | Msa0855400:intron | 40.0% |
| TTTCCTGAATCAAGGGACTA+GGG | + | chr5_4:48689157-48689176 | None:intergenic | 40.0% | |
| ATTTCCTGAATCAAGGGACT+AGG | + | chr5_4:48689158-48689177 | None:intergenic | 40.0% | |
| AAAGGATTATCCTACGAGTG+GGG | + | chr5_4:48689254-48689273 | None:intergenic | 40.0% | |
| ! | ATAGTTTAAAACAGGGGGAG+GGG | + | chr5_4:48689284-48689303 | None:intergenic | 40.0% |
| !! | CAGAGATTAACGAGGTATTG+AGG | + | chr5_4:48689352-48689371 | None:intergenic | 40.0% |
| AAATGAGCACAAGGAGAGAA+AGG | + | chr5_4:48689412-48689431 | None:intergenic | 40.0% | |
| CAAGGTTAGAAATGAGCACA+AGG | + | chr5_4:48689421-48689440 | None:intergenic | 40.0% | |
| GCTAATCTTATCAAGGAAGC+AGG | - | chr5_4:48689440-48689459 | Msa0855400:intron | 40.0% | |
| GATGAAACCCTGACTTTGAA+GGG | + | chr5_4:48689468-48689487 | None:intergenic | 40.0% | |
| TGATGAAACCCTGACTTTGA+AGG | + | chr5_4:48689469-48689488 | None:intergenic | 40.0% | |
| CTGTATAGATACTTGCCCAA+TGG | + | chr5_4:48690256-48690275 | None:intergenic | 40.0% | |
| CATTGGGCAAGTATCTATAC+AGG | - | chr5_4:48690254-48690273 | Msa0855400:intron | 40.0% | |
| TACAGGACTAACTCGGTAAT+TGG | - | chr5_4:48690271-48690290 | Msa0855400:intron | 40.0% | |
| AATCTGAAGACCTGCATAAG+AGG | - | chr5_4:48690483-48690502 | Msa0855400:intron | 40.0% | |
| !! | ACTAGCATTGATGATGGAAC+GGG | + | chr5_4:48690766-48690785 | None:intergenic | 40.0% |
| ATACCGGATTAACTTCCATG+AGG | + | chr5_4:48690841-48690860 | None:intergenic | 40.0% | |
| GTTGAAGAGTTTCACCAGAA+AGG | - | chr5_4:48690909-48690928 | Msa0855400:CDS | 40.0% | |
| GGTAAAGATGGAAACCTTTC+TGG | + | chr5_4:48690926-48690945 | None:intergenic | 40.0% | |
| AGGTTTCCATCTTTACCTCA+AGG | - | chr5_4:48690929-48690948 | Msa0855400:intron | 40.0% | |
| GGATAGATGATAGAACTCAC+TGG | - | chr5_4:48691028-48691047 | Msa0855400:CDS | 40.0% | |
| CAGTAAACTAGGACAGGAAA+AGG | + | chr5_4:48691330-48691349 | None:intergenic | 40.0% | |
| ! | GTAATGGAGTCAATGGGGAA+GGG | + | chr5_4:48680769-48680788 | None:intergenic | 45.0% |
| GCAATAGCAGAAGGACTATG+GGG | - | chr5_4:48680868-48680887 | Msa0855400:three_prime_UTR | 45.0% | |
| !! | CTGCCTTTGCTATTTCTCCT+CGG | + | chr5_4:48680915-48680934 | None:intergenic | 45.0% |
| CGATTGGGAAGAAGGAAACT+TGG | + | chr5_4:48680966-48680985 | None:intergenic | 45.0% | |
| GACTTCAACGATTGGGAAGA+AGG | + | chr5_4:48680974-48680993 | None:intergenic | 45.0% | |
| TATATCGTCGTTGCGTGTAG+CGG | - | chr5_4:48681372-48681391 | Msa0855400:CDS | 45.0% | |
| !! | CGGATACAAAGTTGGTTTGC+TGG | - | chr5_4:48681392-48681411 | Msa0855400:CDS | 45.0% |
| AGGAAGTCGAGTGTTAGATC+TGG | - | chr5_4:48681446-48681465 | Msa0855400:intron | 45.0% | |
| TCCCTCTGTTATAATGAGCC+GGG | + | chr5_4:48681602-48681621 | None:intergenic | 45.0% | |
| GTCCCTCTGTTATAATGAGC+CGG | + | chr5_4:48681603-48681622 | None:intergenic | 45.0% | |
| TGGGTCACGAGAAAGTTGTT+AGG | - | chr5_4:48681687-48681706 | Msa0855400:intron | 45.0% | |
| GGGTCACGAGAAAGTTGTTA+GGG | - | chr5_4:48681688-48681707 | Msa0855400:intron | 45.0% | |
| AACAAGATGGAGACCTATCG+GGG | + | chr5_4:48682104-48682123 | None:intergenic | 45.0% | |
| CAACAAGATGGAGACCTATC+GGG | + | chr5_4:48682105-48682124 | None:intergenic | 45.0% | |
| AGTATTGCGGTTGCAAACAC+AGG | - | chr5_4:48682345-48682364 | Msa0855400:intron | 45.0% | |
| !! | GCTTTTGGAAAGGGGTCAAA+CGG | - | chr5_4:48682582-48682601 | Msa0855400:intron | 45.0% |
| !! | CTTTTGGAAAGGGGTCAAAC+GGG | - | chr5_4:48682583-48682602 | Msa0855400:intron | 45.0% |
| CCGAACTATAGGGATACAGA+AGG | - | chr5_4:48682795-48682814 | Msa0855400:intron | 45.0% | |
| CTTCACCAGAGTTTGAACTC+AGG | + | chr5_4:48682918-48682937 | None:intergenic | 45.0% | |
| CTGAGTTCAAACTCTGGTGA+AGG | - | chr5_4:48682916-48682935 | Msa0855400:intron | 45.0% | |
| GCAGAGAGAGAGTGAATGTT+AGG | + | chr5_4:48682986-48683005 | None:intergenic | 45.0% | |
| GTCAATTGAAGGAGACTACC+GGG | - | chr5_4:48683736-48683755 | Msa0855400:intron | 45.0% | |
| TCAATCTCCGCCTTAGAATG+TGG | - | chr5_4:48683760-48683779 | Msa0855400:intron | 45.0% | |
| ! | GGCATATCCACATTCTAAGG+CGG | + | chr5_4:48683770-48683789 | None:intergenic | 45.0% |
| GTAGCATACTTCAGTAGCAC+AGG | + | chr5_4:48683791-48683810 | None:intergenic | 45.0% | |
| CACTACTAACCTGCAACTCT+GGG | + | chr5_4:48683813-48683832 | None:intergenic | 45.0% | |
| TCACTACTAACCTGCAACTC+TGG | + | chr5_4:48683814-48683833 | None:intergenic | 45.0% | |
| AAGAGCAAAGAAGGGAGCAA+AGG | + | chr5_4:48683859-48683878 | None:intergenic | 45.0% | |
| GTGGGCATGCAATAATGAAG+TGG | + | chr5_4:48684272-48684291 | None:intergenic | 45.0% | |
| ATCATCCCATTGCATGAGGT+GGG | + | chr5_4:48684290-48684309 | None:intergenic | 45.0% | |
| GCAAACATGCACATGTCTGT+GGG | + | chr5_4:48684432-48684451 | None:intergenic | 45.0% | |
| TGCAAACATGCACATGTCTG+TGG | + | chr5_4:48684433-48684452 | None:intergenic | 45.0% | |
| ! | TGTTGTCTCTGAGGATTGTG+TGG | + | chr5_4:48684513-48684532 | None:intergenic | 45.0% |
| GCACATATTCTATCGTACGC+GGG | - | chr5_4:48684566-48684585 | Msa0855400:CDS | 45.0% | |
| GCATCCAGATTGTCAACATG+GGG | + | chr5_4:48684615-48684634 | None:intergenic | 45.0% | |
| CAGCATCCAGATTGTCAACA+TGG | + | chr5_4:48684617-48684636 | None:intergenic | 45.0% | |
| CAGGTCTGATCTTCACTACA+GGG | - | chr5_4:48684716-48684735 | Msa0855400:intron | 45.0% | |
| CTGATCTTCACTACAGGGAA+AGG | - | chr5_4:48684721-48684740 | Msa0855400:intron | 45.0% | |
| ATGGGTTCAGTTCAATTGGG+AGG | - | chr5_4:48684796-48684815 | Msa0855400:CDS | 45.0% | |
| TGGGTTCAGTTCAATTGGGA+GGG | - | chr5_4:48684797-48684816 | Msa0855400:CDS | 45.0% | |
| TTAGCACCACCTCCTATTGA+TGG | - | chr5_4:48684879-48684898 | Msa0855400:intron | 45.0% | |
| TAGCACCACCTCCTATTGAT+GGG | - | chr5_4:48684880-48684899 | Msa0855400:intron | 45.0% | |
| ! | GCGCCCAAAAGGACTTTTTA+AGG | - | chr5_4:48684962-48684981 | Msa0855400:intron | 45.0% |
| TCGGGGATGCGTATAATTCA+AGG | - | chr5_4:48685005-48685024 | Msa0855400:CDS | 45.0% | |
| TGGCAAGTAGTGACGATGAT+AGG | + | chr5_4:48685267-48685286 | None:intergenic | 45.0% | |
| ! | CCGTGGAATGTCTTTTCTGT+TGG | - | chr5_4:48685311-48685330 | Msa0855400:intron | 45.0% |
| ! | ATTGCTGTTGTGCATTGCTG+TGG | - | chr5_4:48685474-48685493 | Msa0855400:intron | 45.0% |
| ! | GGAATTACTGATGGTGTCAG+AGG | - | chr5_4:48685578-48685597 | Msa0855400:intron | 45.0% |
| GGGCTCACACAATATACAAC+AGG | + | chr5_4:48685858-48685877 | None:intergenic | 45.0% | |
| ATGGGACAAGAAAGGAATGG+TGG | - | chr5_4:48686187-48686206 | Msa0855400:intron | 45.0% | |
| ! | GATGTGCTGTTCACCAAAGA+TGG | - | chr5_4:48686327-48686346 | Msa0855400:CDS | 45.0% |
| !!! | TGATGCTTTTTCTGCCGTCA+TGG | - | chr5_4:48686507-48686526 | Msa0855400:CDS | 45.0% |
| ATGTAAAAGCCACCCCAACA+TGG | - | chr5_4:48686544-48686563 | Msa0855400:intron | 45.0% | |
| !! | TGCCACTTTGAAGCCATGTT+GGG | + | chr5_4:48686560-48686579 | None:intergenic | 45.0% |
| !! | ATGCCACTTTGAAGCCATGT+TGG | + | chr5_4:48686561-48686580 | None:intergenic | 45.0% |
| CCGTCATTTAAGAATGAGGG+TGG | - | chr5_4:48686615-48686634 | Msa0855400:intron | 45.0% | |
| AAGCAAGCCACCTAATAAGG+TGG | + | chr5_4:48686701-48686720 | None:intergenic | 45.0% | |
| CAGAAGCAAGCCACCTAATA+AGG | + | chr5_4:48686704-48686723 | None:intergenic | 45.0% | |
| !! | CTTATTAGGTGGCTTGCTTC+TGG | - | chr5_4:48686702-48686721 | Msa0855400:intron | 45.0% |
| ! | GGCATTCTGTGCAAGTTTTC+AGG | - | chr5_4:48686812-48686831 | Msa0855400:intron | 45.0% |
| GGCCAATATGCTCATTCTGT+TGG | - | chr5_4:48687032-48687051 | Msa0855400:intron | 45.0% | |
| CAATCAAATCAAGTGCCTGC+AGG | + | chr5_4:48687419-48687438 | None:intergenic | 45.0% | |
| ! | CTGCAGGCACTTGATTTGAT+TGG | - | chr5_4:48687417-48687436 | Msa0855400:CDS | 45.0% |
| GTAGGGGTTAGAGAGAAAAC+TGG | - | chr5_4:48687468-48687487 | Msa0855400:CDS | 45.0% | |
| ! | GCCGGTTTAAATGATTTGGC+TGG | + | chr5_4:48688238-48688257 | None:intergenic | 45.0% |
| CACGTTAGGGGCAAACAAAT+TGG | + | chr5_4:48688303-48688322 | None:intergenic | 45.0% | |
| TGCACTGTATAGCACGTTAG+GGG | + | chr5_4:48688315-48688334 | None:intergenic | 45.0% | |
| CATGCACTGTATAGCACGTT+AGG | + | chr5_4:48688317-48688336 | None:intergenic | 45.0% | |
| TACAATGGCCAAACTGCCAA+GGG | + | chr5_4:48688699-48688718 | None:intergenic | 45.0% | |
| ATACAATGGCCAAACTGCCA+AGG | + | chr5_4:48688700-48688719 | None:intergenic | 45.0% | |
| AGACGATCTCAAAATCTCCC+TGG | + | chr5_4:48688741-48688760 | None:intergenic | 45.0% | |
| ATCACAAAGCTTCTTGGCCA+AGG | + | chr5_4:48688768-48688787 | None:intergenic | 45.0% | |
| GTGATGTTCCTTCTCAAGTC+TGG | - | chr5_4:48688783-48688802 | Msa0855400:intron | 45.0% | |
| GCAAGAAATGAAAGACACGG+TGG | + | chr5_4:48688948-48688967 | None:intergenic | 45.0% | |
| GACACGCGACTTTATATACC+AGG | + | chr5_4:48689015-48689034 | None:intergenic | 45.0% | |
| TTCCTGAATCAAGGGACTAG+GGG | + | chr5_4:48689156-48689175 | None:intergenic | 45.0% | |
| ! | ACATAGTTTTCCCCACTCGT+AGG | - | chr5_4:48689241-48689260 | Msa0855400:intron | 45.0% |
| ACAAGGAGAGAAAGGAACTG+GGG | + | chr5_4:48689404-48689423 | None:intergenic | 45.0% | |
| CACAAGGAGAGAAAGGAACT+GGG | + | chr5_4:48689405-48689424 | None:intergenic | 45.0% | |
| CATTAACTTCAGTGTCGCCA+TGG | - | chr5_4:48690112-48690131 | Msa0855400:intron | 45.0% | |
| !!! | TCGCGCGATTTTAACTACCA+TGG | + | chr5_4:48690132-48690151 | None:intergenic | 45.0% |
| GACACATTAGCTGCAGATAG+TGG | - | chr5_4:48690296-48690315 | Msa0855400:intron | 45.0% | |
| GCAACTTTGATAGACGAGCA+GGG | - | chr5_4:48690318-48690337 | Msa0855400:intron | 45.0% | |
| GTGGTAGAAGACGTGGAAAA+CGG | - | chr5_4:48690800-48690819 | Msa0855400:CDS | 45.0% | |
| AGACAGCCTTGAGGTAAAGA+TGG | + | chr5_4:48690938-48690957 | None:intergenic | 45.0% | |
| ATACTTGACAGACAGCCTTG+AGG | + | chr5_4:48690947-48690966 | None:intergenic | 45.0% | |
| GCATTGCAGTAAACTAGGAC+AGG | + | chr5_4:48691336-48691355 | None:intergenic | 45.0% | |
| !! | TTGTTAATATTATTAATATT+TGG | + | chr5_4:48681715-48681734 | None:intergenic | 5.0% |
| !!! | TTTAAAAAAAAAATGATTTT+TGG | + | chr5_4:48682207-48682226 | None:intergenic | 5.0% |
| !!! | TTTTGATTAAAAAAAAATAA+CGG | + | chr5_4:48687387-48687406 | None:intergenic | 5.0% |
| !!! | ATTTTTTGTTAATTATATTT+TGG | - | chr5_4:48690594-48690613 | Msa0855400:intron | 5.0% |
| !! | GGTAATGGAGTCAATGGGGA+AGG | + | chr5_4:48680770-48680789 | None:intergenic | 50.0% |
| GCAGACCATCATGAAAACCG+AGG | - | chr5_4:48680895-48680914 | Msa0855400:three_prime_UTR | 50.0% | |
| !! | TTGGAACAAGGGGTGGGTTA+AGG | + | chr5_4:48681095-48681114 | None:intergenic | 50.0% |
| ! | CTTGATCTTGCTGCTTCTGC+TGG | - | chr5_4:48681283-48681302 | Msa0855400:CDS | 50.0% |
| ! | CTTGCTGCTTCTGCTGGAAA+TGG | - | chr5_4:48681289-48681308 | Msa0855400:CDS | 50.0% |
| !! | GCGTGTAGCGGATACAAAGT+TGG | - | chr5_4:48681384-48681403 | Msa0855400:CDS | 50.0% |
| ACTGAGGGCAAATTAGTCCC+CGG | - | chr5_4:48681581-48681600 | Msa0855400:CDS | 50.0% | |
| TCCCCGGCTCATTATAACAG+AGG | - | chr5_4:48681597-48681616 | Msa0855400:CDS | 50.0% | |
| CCCTCTGTTATAATGAGCCG+GGG | + | chr5_4:48681601-48681620 | None:intergenic | 50.0% | |
| CCCCGGCTCATTATAACAGA+GGG | - | chr5_4:48681598-48681617 | Msa0855400:CDS | 50.0% | |
| ACCCTTAGCTCAAACCGGTT+GGG | + | chr5_4:48682879-48682898 | None:intergenic | 50.0% | |
| AACCCTTAGCTCAAACCGGT+TGG | + | chr5_4:48682880-48682899 | None:intergenic | 50.0% | |
| GAGGACCTGAGTTCAAACTC+TGG | - | chr5_4:48682910-48682929 | Msa0855400:intron | 50.0% | |
| GTTAACTAGAGAGGCAGGGA+GGG | + | chr5_4:48683011-48683030 | None:intergenic | 50.0% | |
| AGTTAACTAGAGAGGCAGGG+AGG | + | chr5_4:48683012-48683031 | None:intergenic | 50.0% | |
| ! | TCTAAGGCGGAGATTGAACC+CGG | + | chr5_4:48683757-48683776 | None:intergenic | 50.0% |
| AGTATGCTACCCAGAGTTGC+AGG | - | chr5_4:48683801-48683820 | Msa0855400:intron | 50.0% | |
| CATCATCCCATTGCATGAGG+TGG | + | chr5_4:48684291-48684310 | None:intergenic | 50.0% | |
| TGCACCCCATGTTGACAATC+TGG | - | chr5_4:48684608-48684627 | Msa0855400:CDS | 50.0% | |
| ACAATCTGGATGCTGCTGTG+AGG | - | chr5_4:48684622-48684641 | Msa0855400:CDS | 50.0% | |
| CAATCTGGATGCTGCTGTGA+GGG | - | chr5_4:48684623-48684642 | Msa0855400:CDS | 50.0% | |
| CCTGTAGTGAAGATCAGACC+TGG | + | chr5_4:48684718-48684737 | None:intergenic | 50.0% | |
| CCAGGTCTGATCTTCACTAC+AGG | - | chr5_4:48684715-48684734 | Msa0855400:intron | 50.0% | |
| AGCACCACCTCCTATTGATG+GGG | - | chr5_4:48684881-48684900 | Msa0855400:intron | 50.0% | |
| CATTCCCCATCAATAGGAGG+TGG | + | chr5_4:48684888-48684907 | None:intergenic | 50.0% | |
| CACCTCCTATTGATGGGGAA+TGG | - | chr5_4:48684886-48684905 | Msa0855400:intron | 50.0% | |
| AGCCATTCCCCATCAATAGG+AGG | + | chr5_4:48684891-48684910 | None:intergenic | 50.0% | |
| GGAAGCCATTCCCCATCAAT+AGG | + | chr5_4:48684894-48684913 | None:intergenic | 50.0% | |
| GTTGTATTTGGGCGCCCAAA+AGG | - | chr5_4:48684951-48684970 | Msa0855400:intron | 50.0% | |
| ! | GTGTGGAAAGCGCATACAGT+CGG | - | chr5_4:48684986-48685005 | Msa0855400:intron | 50.0% |
| ! | TGTGGAAAGCGCATACAGTC+GGG | - | chr5_4:48684987-48685006 | Msa0855400:intron | 50.0% |
| TATATGTCCAACCACAGCCG+TGG | - | chr5_4:48685294-48685313 | Msa0855400:intron | 50.0% | |
| GAAAAGACATTCCACGGCTG+TGG | + | chr5_4:48685308-48685327 | None:intergenic | 50.0% | |
| ATTGGCGATAGGTTACGCAC+TGG | - | chr5_4:48686303-48686322 | Msa0855400:CDS | 50.0% | |
| GATAGAGATGTGTGGGTGAG+AGG | - | chr5_4:48686363-48686382 | Msa0855400:CDS | 50.0% | |
| !! | ACTTTGAAGCCATGTTGGGG+TGG | + | chr5_4:48686556-48686575 | None:intergenic | 50.0% |
| ACCCCAACATGGCTTCAAAG+TGG | - | chr5_4:48686555-48686574 | Msa0855400:intron | 50.0% | |
| !! | GCCACTTTGAAGCCATGTTG+GGG | + | chr5_4:48686559-48686578 | None:intergenic | 50.0% |
| CGTGTCTGAGTGAAGAAGAC+TGG | - | chr5_4:48688035-48688054 | Msa0855400:intron | 50.0% | |
| TCTGGTGGAACTAGACAGTC+TGG | + | chr5_4:48688114-48688133 | None:intergenic | 50.0% | |
| !!! | TGGGTGCTGACTGTTTTGAC+AGG | - | chr5_4:48688803-48688822 | Msa0855400:intron | 50.0% |
| AAGGAGAGAAAGGAACTGGG+GGG | + | chr5_4:48689402-48689421 | None:intergenic | 50.0% | |
| CAAGGAGAGAAAGGAACTGG+GGG | + | chr5_4:48689403-48689422 | None:intergenic | 50.0% | |
| GCACAAGGAGAGAAAGGAAC+TGG | + | chr5_4:48689406-48689425 | None:intergenic | 50.0% | |
| AGCAGGTTCCCTTCAAAGTC+AGG | - | chr5_4:48689457-48689476 | Msa0855400:intron | 50.0% | |
| GCAGGTTCCCTTCAAAGTCA+GGG | - | chr5_4:48689458-48689477 | Msa0855400:intron | 50.0% | |
| AGTGAGGAGTTTGACAGCCA+TGG | + | chr5_4:48689846-48689865 | None:intergenic | 50.0% | |
| GGCAACTTTGATAGACGAGC+AGG | - | chr5_4:48690317-48690336 | Msa0855400:intron | 50.0% | |
| CTTTGATAGACGAGCAGGGA+TGG | - | chr5_4:48690322-48690341 | Msa0855400:intron | 50.0% | |
| TGAAGACCTGCATAAGAGGC+TGG | - | chr5_4:48690487-48690506 | Msa0855400:intron | 50.0% | |
| GTTGGAAATCAGGCGTGCAA+TGG | - | chr5_4:48690675-48690694 | Msa0855400:intron | 50.0% | |
| !! | GATGGTAGTGGTAGAAGACG+TGG | - | chr5_4:48690793-48690812 | Msa0855400:CDS | 50.0% |
| !! | GATTGCTCTAAGGTGCAAGC+AGG | - | chr5_4:48690887-48690906 | Msa0855400:CDS | 50.0% |
| TGAGAGATGGGTAGCCCAAC+CGG | - | chr5_4:48682862-48682881 | Msa0855400:intron | 55.0% | |
| !! | AGCCCAACCGGTTTGAGCTA+AGG | - | chr5_4:48682874-48682893 | Msa0855400:intron | 55.0% |
| !! | GCCCAACCGGTTTGAGCTAA+GGG | - | chr5_4:48682875-48682894 | Msa0855400:intron | 55.0% |
| TGCATGCCCACCTCATGCAA+TGG | - | chr5_4:48684281-48684300 | Msa0855400:intron | 55.0% | |
| GCATGCCCACCTCATGCAAT+GGG | - | chr5_4:48684282-48684301 | Msa0855400:intron | 55.0% | |
| !! | CCAGGGCATTGTTGTCTCTG+AGG | + | chr5_4:48684522-48684541 | None:intergenic | 55.0% |
| CCTCAGAGACAACAATGCCC+TGG | - | chr5_4:48684519-48684538 | Msa0855400:intron | 55.0% | |
| CTGCTGTGAGGGCTGAAAAG+AGG | - | chr5_4:48684634-48684653 | Msa0855400:CDS | 55.0% | |
| GGGAATGGCAGAAGGACACT+AGG | - | chr5_4:48684843-48684862 | Msa0855400:CDS | 55.0% | |
| ! | GTGGAAAGCGCATACAGTCG+GGG | - | chr5_4:48684988-48685007 | Msa0855400:intron | 55.0% |
| AGACATTCCACGGCTGTGGT+TGG | + | chr5_4:48685304-48685323 | None:intergenic | 55.0% | |
| AGAATACGCTGAAGCGCAGC+AGG | - | chr5_4:48685796-48685815 | Msa0855400:intron | 55.0% | |
| TCTAACGCAGGTGGATCCCA+TGG | - | chr5_4:48687361-48687380 | Msa0855400:CDS | 55.0% | |
| TGCGTGACACTGTACAAGCC+AGG | - | chr5_4:48688720-48688739 | Msa0855400:intron | 55.0% | |
| GCGTGACACTGTACAAGCCA+GGG | - | chr5_4:48688721-48688740 | Msa0855400:intron | 55.0% | |
| GTCAGCACCCAGACTTGAGA+AGG | + | chr5_4:48688794-48688813 | None:intergenic | 55.0% | |
| CTCCCCTAGTCCCTTGATTC+AGG | - | chr5_4:48689151-48689170 | Msa0855400:intron | 55.0% | |
| AGGGGGAGGGGTTACCAAAA+AGG | + | chr5_4:48689272-48689291 | None:intergenic | 55.0% | |
| GATAGACGAGCAGGGATGGA+TGG | - | chr5_4:48690326-48690345 | Msa0855400:intron | 55.0% | |
| CATCAGCCAGCCTCTTATGC+AGG | + | chr5_4:48690496-48690515 | None:intergenic | 55.0% | |
| GAAATCAGGCGTGCAATGGC+AGG | - | chr5_4:48690679-48690698 | Msa0855400:intron | 55.0% | |
| TGCAATGGCAGGACCAAGCA+TGG | - | chr5_4:48690690-48690709 | Msa0855400:intron | 55.0% | |
| GCAATGGCAGGACCAAGCAT+GGG | - | chr5_4:48690691-48690710 | Msa0855400:intron | 55.0% | |
| GCTGGCAGGCCAATAGATTC+TGG | + | chr5_4:48690736-48690755 | None:intergenic | 55.0% | |
| TTATGCCGCGGCCCAGATAG+CGG | - | chr5_4:48682059-48682078 | Msa0855400:intron | 60.0% | |
| CAAAACCGCTATCTGGGCCG+CGG | + | chr5_4:48682067-48682086 | None:intergenic | 60.0% | |
| AACTAGAGAGGCAGGGAGGG+AGG | + | chr5_4:48683008-48683027 | None:intergenic | 60.0% | |
| TACGCTGAAGCGCAGCAGGT+TGG | - | chr5_4:48685800-48685819 | Msa0855400:intron | 60.0% | |
| GATGGAACGGGTGCTTGTGC+TGG | + | chr5_4:48690754-48690773 | None:intergenic | 60.0% | |
| !! | CGCGGCCCAGATAGCGGTTT+TGG | - | chr5_4:48682065-48682084 | Msa0855400:intron | 65.0% |
| ! | GAACGGGTGCTTGTGCTGGC+AGG | + | chr5_4:48690750-48690769 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 48680729 | 48691370 | 48680729 | ID=Msa0855400;Name=Msa0855400 |
| chr5_4 | mRNA | 48680729 | 48691370 | 48680729 | ID=Msa0855400-mRNA-1;Parent=Msa0855400;Name=Msa0855400-mRNA-1;_AED=0.14;_eAED=0.14;_QI=133|1|1|1|0.91|1|13|539|705 |
| chr5_4 | exon | 48680729 | 48681462 | 48680729 | ID=Msa0855400-mRNA-1:exon:15405;Parent=Msa0855400-mRNA-1 |
| chr5_4 | exon | 48681555 | 48681679 | 48681555 | ID=Msa0855400-mRNA-1:exon:15404;Parent=Msa0855400-mRNA-1 |
| chr5_4 | exon | 48683275 | 48683480 | 48683275 | ID=Msa0855400-mRNA-1:exon:15403;Parent=Msa0855400-mRNA-1 |
| chr5_4 | exon | 48684552 | 48684676 | 48684552 | ID=Msa0855400-mRNA-1:exon:15402;Parent=Msa0855400-mRNA-1 |
| chr5_4 | exon | 48684780 | 48684869 | 48684780 | ID=Msa0855400-mRNA-1:exon:15401;Parent=Msa0855400-mRNA-1 |
| chr5_4 | exon | 48685002 | 48685148 | 48685002 | ID=Msa0855400-mRNA-1:exon:15400;Parent=Msa0855400-mRNA-1 |
| chr5_4 | exon | 48686282 | 48686403 | 48686282 | ID=Msa0855400-mRNA-1:exon:15399;Parent=Msa0855400-mRNA-1 |
| chr5_4 | exon | 48686500 | 48686538 | 48686500 | ID=Msa0855400-mRNA-1:exon:15398;Parent=Msa0855400-mRNA-1 |
| chr5_4 | exon | 48687073 | 48687574 | 48687073 | ID=Msa0855400-mRNA-1:exon:15397;Parent=Msa0855400-mRNA-1 |
| chr5_4 | exon | 48687724 | 48687840 | 48687724 | ID=Msa0855400-mRNA-1:exon:15396;Parent=Msa0855400-mRNA-1 |
| chr5_4 | exon | 48688277 | 48688352 | 48688277 | ID=Msa0855400-mRNA-1:exon:15395;Parent=Msa0855400-mRNA-1 |
| chr5_4 | exon | 48690779 | 48690939 | 48690779 | ID=Msa0855400-mRNA-1:exon:15394;Parent=Msa0855400-mRNA-1 |
| chr5_4 | exon | 48691025 | 48691370 | 48691025 | ID=Msa0855400-mRNA-1:exon:15393;Parent=Msa0855400-mRNA-1 |
| chr5_4 | five_prime_UTR | 48691238 | 48691370 | 48691238 | ID=Msa0855400-mRNA-1:five_prime_utr;Parent=Msa0855400-mRNA-1 |
| chr5_4 | CDS | 48691025 | 48691237 | 48691025 | ID=Msa0855400-mRNA-1:cds;Parent=Msa0855400-mRNA-1 |
| chr5_4 | CDS | 48690779 | 48690939 | 48690779 | ID=Msa0855400-mRNA-1:cds;Parent=Msa0855400-mRNA-1 |
| chr5_4 | CDS | 48688277 | 48688352 | 48688277 | ID=Msa0855400-mRNA-1:cds;Parent=Msa0855400-mRNA-1 |
| chr5_4 | CDS | 48687724 | 48687840 | 48687724 | ID=Msa0855400-mRNA-1:cds;Parent=Msa0855400-mRNA-1 |
| chr5_4 | CDS | 48687073 | 48687574 | 48687073 | ID=Msa0855400-mRNA-1:cds;Parent=Msa0855400-mRNA-1 |
| chr5_4 | CDS | 48686500 | 48686538 | 48686500 | ID=Msa0855400-mRNA-1:cds;Parent=Msa0855400-mRNA-1 |
| chr5_4 | CDS | 48686282 | 48686403 | 48686282 | ID=Msa0855400-mRNA-1:cds;Parent=Msa0855400-mRNA-1 |
| chr5_4 | CDS | 48685002 | 48685148 | 48685002 | ID=Msa0855400-mRNA-1:cds;Parent=Msa0855400-mRNA-1 |
| chr5_4 | CDS | 48684780 | 48684869 | 48684780 | ID=Msa0855400-mRNA-1:cds;Parent=Msa0855400-mRNA-1 |
| chr5_4 | CDS | 48684552 | 48684676 | 48684552 | ID=Msa0855400-mRNA-1:cds;Parent=Msa0855400-mRNA-1 |
| chr5_4 | CDS | 48683275 | 48683480 | 48683275 | ID=Msa0855400-mRNA-1:cds;Parent=Msa0855400-mRNA-1 |
| chr5_4 | CDS | 48681555 | 48681679 | 48681555 | ID=Msa0855400-mRNA-1:cds;Parent=Msa0855400-mRNA-1 |
| chr5_4 | CDS | 48681268 | 48681462 | 48681268 | ID=Msa0855400-mRNA-1:cds;Parent=Msa0855400-mRNA-1 |
| chr5_4 | three_prime_UTR | 48680729 | 48681267 | 48680729 | ID=Msa0855400-mRNA-1:three_prime_utr;Parent=Msa0855400-mRNA-1 |
| Gene Sequence |
| Protein sequence |
