AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1437210


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1437210 MtrunA17_Chr5g0433081 98.489 728 10 1 1 727 1 728 0.0 1484
Msa1437210 MtrunA17_Chr6g0469601 76.316 228 52 1 437 664 1 226 8.60e-120 358
Msa1437210 MtrunA17_Chr6g0469621 77.600 125 27 1 1 125 1 124 8.16e-61 201
Msa1437210 MtrunA17_Chr6g0469611 73.171 123 33 0 310 432 68 190 2.19e-55 188
Msa1437210 MtrunA17_Chr6g0469611 75.000 48 12 0 126 173 16 63 2.15e-18 84.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1437210 AT5G51340.1 61.210 727 275 5 3 727 5 726 0.0 902

Find 191 sgRNAs with CRISPR-Local

Find 659 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTCTTGAACCAGTATATTT+TGG 0.081689 tig0028199:-37346 Msa1437210:CDS
GCAGTTGACACATACTTATT+TGG 0.120120 tig0028199:-33525 Msa1437210:CDS
GCAATGCAATATAGAGTTTC+TGG 0.182953 tig0028199:-30811 None:intergenic
TGACATGTTAACATTATAAT+AGG 0.187357 tig0028199:-31112 Msa1437210:three_prime_UTR
TACTATTTCAATATGATAAA+TGG 0.195118 tig0028199:+31638 Msa1437210:intergenic
TGCCAAGGGTTGTTAAATAT+TGG 0.199482 tig0028199:+33483 Msa1437210:intergenic
GATCTGATAACTGTTGTATT+TGG 0.202653 tig0028199:-37229 Msa1437210:CDS
AGGTAAGATGGAAACCTTTC+TGG 0.205483 tig0028199:+31240 Msa1437210:intergenic
GCAGCTTTATATAAAGAATT+AGG 0.211220 tig0028199:-31747 Msa1437210:intron
TATTGTGAATTAATTATTAT+AGG 0.234633 tig0028199:-31300 Msa1437210:three_prime_UTR
GTGATGTTCCTTCTCAAGTC+TGG 0.241430 tig0028199:-33382 Msa1437210:CDS
CTGCAGGCACTTGATTTGAT+TGG 0.246316 tig0028199:-34733 Msa1437210:intron
CAGTTGACACATACTTATTT+GGG 0.261713 tig0028199:-33524 Msa1437210:CDS
ATCCTTCAGTGATGTTATAT+TGG 0.265154 tig0028199:-30966 Msa1437210:three_prime_UTR
ACATTTGCACTCACTTTATC+TGG 0.269511 tig0028199:+37801 Msa1437210:intergenic
GCAATGGGATGATGATAATT+TGG 0.276465 tig0028199:-37871 Msa1437210:CDS
TTAATAAATGCAATGAGATT+TGG 0.289386 tig0028199:-37836 Msa1437210:CDS
GACATGTTAACATTATAATA+GGG 0.305580 tig0028199:-31111 Msa1437210:three_prime_UTR
GCAACACTCTTCTATCTATA+TGG 0.312255 tig0028199:-36460 Msa1437210:CDS
ATGAATGGGTTCAGTTCAAT+TGG 0.315950 tig0028199:-37376 Msa1437210:CDS
CTTGATCTTGCTGCTTCTGC+TGG 0.320668 tig0028199:-40925 Msa1437210:CDS
ATTTAGCGTGATTAGCGTTA+TGG 0.320986 tig0028199:+41173 Msa1437210:intergenic
GCCAAGGGTTGTTAAATATT+GGG 0.323023 tig0028199:+33484 Msa1437210:intergenic
AAGCAATAGCAGAAGGACTA+TGG 0.331016 tig0028199:-41342 Msa1437210:CDS
CTTGATATTCCAGAATCTAT+TGG 0.335505 tig0028199:-31439 Msa1437210:CDS
ATCTGATAACTGTTGTATTT+GGG 0.336485 tig0028199:-37228 Msa1437210:CDS
TCATTACTAACCTGCAACTC+TGG 0.337694 tig0028199:+38358 Msa1437210:intergenic
CTGCCATTCCCAAAATATAC+TGG 0.357430 tig0028199:+37337 Msa1437210:intergenic
TAATAAATGCAATGAGATTT+GGG 0.359630 tig0028199:-37835 Msa1437210:CDS
TTTAACAACCCTTGGCAGTT+TGG 0.361450 tig0028199:-33477 Msa1437210:CDS
GCAAATGCTTTGTCAATTGA+AGG 0.362470 tig0028199:-38445 Msa1437210:CDS
TGCAGGCACTTGATTTGATT+GGG 0.367684 tig0028199:-34732 Msa1437210:intron
TTTAGCGTGATTAGCGTTAT+GGG 0.367809 tig0028199:+41174 Msa1437210:intergenic
TATTATAGGTGATTGCTCTA+AGG 0.372713 tig0028199:-31286 Msa1437210:three_prime_UTR
CTTGCTGCTTCTGCTGGAAA+TGG 0.378335 tig0028199:-40919 Msa1437210:CDS
GAATCCATTACTTCATAAAC+TGG 0.379344 tig0028199:+34709 Msa1437210:intergenic
AGTCAGTGTTATCATCTTGT+TGG 0.381878 tig0028199:-40985 Msa1437210:CDS
ACAGGCATATCCACATTCTA+AGG 0.382816 tig0028199:+38399 Msa1437210:intergenic
GGAAGCCATTCCCCATCAAT+AGG 0.388509 tig0028199:+37277 Msa1437210:intergenic
TCTTAGATCAAAGTCTTTCC+AGG 0.393758 tig0028199:-37471 Msa1437210:CDS
AGCTATTCAACCTCAGAAAC+AGG 0.402241 tig0028199:-40962 Msa1437210:CDS
AGTATGCTACCCAGAGTTGC+AGG 0.403307 tig0028199:-38368 Msa1437210:intron
TATAAAGAATTAGGAGAAAG+AGG 0.407292 tig0028199:-31738 Msa1437210:CDS
AGGAGAAAGAGGAAATGAAT+TGG 0.410295 tig0028199:-31727 Msa1437210:CDS
GACTTCAACGATTGGGAAGA+AGG 0.415786 tig0028199:+41237 Msa1437210:intergenic
ACTGGTGTTCTCTTTGCTTA+CGG 0.421280 tig0028199:-34664 Msa1437210:CDS
AGCCAACAGAATGAGCATAT+TGG 0.429005 tig0028199:+35193 Msa1437210:intergenic
AAACAAGGTAATGGAGTCAA+TGG 0.429578 tig0028199:+41435 Msa1437210:intergenic
TGATGTTCCTTCTCAAGTCT+GGG 0.431657 tig0028199:-33381 Msa1437210:CDS
AATCTGAAGACCTGCATAAG+AGG 0.433902 tig0028199:-31680 Msa1437210:CDS
GCTGGCAGGCCAATAGATTC+TGG 0.437072 tig0028199:+31430 Msa1437210:intergenic
GTTGTAGCAATTGTTGTTGA+AGG 0.440815 tig0028199:-41055 Msa1437210:intron
CTAGGACAGGAAAAGGATAT+AGG 0.442738 tig0028199:+30840 Msa1437210:intergenic
TTTCCTCATGGAAGTTAATC+CGG 0.443904 tig0028199:-31328 Msa1437210:three_prime_UTR
GTAGGGGTTAGAGAGAAAAC+TGG 0.445928 tig0028199:-34682 Msa1437210:CDS
AGTTCCACAATTACATGAGT+TGG 0.448049 tig0028199:-31506 Msa1437210:CDS
AACAAGGTAATGGAGTCAAT+GGG 0.449558 tig0028199:+41436 Msa1437210:intergenic
TTCTGCTCGTGTGAGCTCTA+AGG 0.449899 tig0028199:+36389 Msa1437210:intergenic
GTTGTATTTGGGCGCCCAAA+AGG 0.455207 tig0028199:-37217 Msa1437210:CDS
CCAGGTCTGATCTTCACTAC+AGG 0.456609 tig0028199:-37453 Msa1437210:CDS
TTTGAGATCGTCTTTGACCT+TGG 0.457471 tig0028199:-33417 Msa1437210:CDS
CGATTGGGAAGAAGGAAACT+TGG 0.457515 tig0028199:+41245 Msa1437210:intergenic
TCCCAATATTTAACAACCCT+TGG 0.460214 tig0028199:-33485 Msa1437210:CDS
CAATCTGGATGCTGCTGTGA+GGG 0.463438 tig0028199:-37545 Msa1437210:CDS
TCAATGCTAGTTGATATAGA+TGG 0.466176 tig0028199:-31388 Msa1437210:CDS
CACTCTTCTATCTATATGGC+TGG 0.467721 tig0028199:-36456 Msa1437210:CDS
AGAATACGCTGAAGCGCAGC+AGG 0.467829 tig0028199:-36370 Msa1437210:intron
GCTGTTTCTTATATCTGCAT+TGG 0.468996 tig0028199:-34877 Msa1437210:CDS
TGCACCCCATGTGGACAATC+TGG 0.469312 tig0028199:-37560 Msa1437210:CDS
AATTACATGAGTTGGAAATC+AGG 0.469313 tig0028199:-31498 Msa1437210:CDS
CAGTAAACTAGGACAGGAAA+AGG 0.470908 tig0028199:+30833 Msa1437210:intergenic
CTGCCTTTGCTATTTCTCCT+CGG 0.475620 tig0028199:+41296 Msa1437210:intergenic
TCATTATATTGAAGCAGTAA+AGG 0.476671 tig0028199:-35151 Msa1437210:intron
TCATTATAAAAGAGCAAGCC+AGG 0.477095 tig0028199:+37631 Msa1437210:intergenic
AATATTGGGAAATAAGTTGA+AGG 0.479547 tig0028199:+33498 Msa1437210:intergenic
CATCAGCCAGCCTCTTATGC+AGG 0.479985 tig0028199:+31670 Msa1437210:intergenic
TTAGCACCACCTCCTATTGA+TGG 0.483364 tig0028199:-37289 Msa1437210:CDS
GCAGATGAGTTATTGAAGCT+TGG 0.485607 tig0028199:-36609 Msa1437210:intron
AAGAAACAGCTGCATAAACT+TGG 0.488131 tig0028199:+34890 Msa1437210:intergenic
TGCAATGGCAGGACCAAGCA+TGG 0.493939 tig0028199:-31473 Msa1437210:CDS
GAAATCAGGCGTGCAATGGC+AGG 0.494077 tig0028199:-31484 Msa1437210:CDS
ATTAATTCACAATAATATAC+CGG 0.495687 tig0028199:+31309 Msa1437210:intergenic
TGTGGAAAGCGCATACAGTC+GGG 0.497372 tig0028199:-37181 Msa1437210:CDS
GTTGAAGAGTTTCACCAGAA+AGG 0.498557 tig0028199:-31254 Msa1437210:three_prime_UTR
TGGGCCAGTTTATGAAGTAA+TGG 0.502117 tig0028199:-34713 Msa1437210:CDS
CAGACAGCCTTGAGGTAAGA+TGG 0.504919 tig0028199:+31228 Msa1437210:intergenic
AAAAGAGAAAATAGTGGTGT+AGG 0.508592 tig0028199:-31075 Msa1437210:three_prime_UTR
AGATTATTAACTCCCATGCT+TGG 0.509167 tig0028199:+31460 Msa1437210:intergenic
GATGGAACGGGTGCTTGTGC+TGG 0.512012 tig0028199:+31412 Msa1437210:intergenic
ACTAGCATTGATGATGGAAC+GGG 0.513415 tig0028199:+31400 Msa1437210:intergenic
AAGAAAGAAAGAAACAAGAA+TGG 0.513471 tig0028199:-41365 Msa1437210:exon
CTGATCTTCACTACAGGGAA+AGG 0.519030 tig0028199:-37447 Msa1437210:CDS
ATATCAACTAGCATTGATGA+TGG 0.519320 tig0028199:+31394 Msa1437210:intergenic
CGTTATGGGAATGATGAAGA+AGG 0.519529 tig0028199:+41188 Msa1437210:intergenic
GTCAATTGAAGGAGACTACC+GGG 0.520011 tig0028199:-38434 Msa1437210:CDS
TCGGGGATGCGTATAATTCA+AGG 0.520091 tig0028199:-37163 Msa1437210:intron
AGCAATAGCAGAAGGACTAT+GGG 0.521406 tig0028199:-41341 Msa1437210:CDS
TTAAACAAAACCTGTTTCTG+AGG 0.523904 tig0028199:+40952 Msa1437210:intergenic
TGAATGGGTTCAGTTCAATT+GGG 0.525092 tig0028199:-37375 Msa1437210:CDS
TGCGTGACACTGTACAAGCC+AGG 0.526369 tig0028199:-33445 Msa1437210:CDS
TGATGCTGAATCTAATTCAC+AGG 0.529148 tig0028199:-34854 Msa1437210:intron
ATTTCCAACTCATGTAATTG+TGG 0.531387 tig0028199:+31502 Msa1437210:intergenic
TGCATGCCCACCTCATGCAA+TGG 0.532942 tig0028199:-37887 Msa1437210:CDS
GTGTGGAAAGCGCATACAGT+CGG 0.533624 tig0028199:-37182 Msa1437210:CDS
GCATACTAAATTAACTGTAC+AGG 0.534807 tig0028199:+31180 Msa1437210:intergenic
CATTACTAACCTGCAACTCT+GGG 0.535113 tig0028199:+38359 Msa1437210:intergenic
ACTCATTAAGTTACATGAGC+AGG 0.537381 tig0028199:-31157 Msa1437210:three_prime_UTR
ATATTGCATTGCAGTAAACT+AGG 0.537927 tig0028199:+30822 Msa1437210:intergenic
GAAGGATTTCAACAAAGTTG+TGG 0.538192 tig0028199:-38492 Msa1437210:intron
CACCTCCTATTGATGGGGAA+TGG 0.538532 tig0028199:-37282 Msa1437210:CDS
CAGCATCCAGATTGTCCACA+TGG 0.539855 tig0028199:+37554 Msa1437210:intergenic
TGTAGAATTCGTTTGGCGAA+GGG 0.540683 tig0028199:-33551 Msa1437210:intron
ACATGTTAACATTATAATAG+GGG 0.541331 tig0028199:-31110 Msa1437210:three_prime_UTR
GTGGTAGAAGACGTGGAAAA+CGG 0.543016 tig0028199:-31363 Msa1437210:CDS
TAGCACCACCTCCTATTGAT+GGG 0.543363 tig0028199:-37288 Msa1437210:CDS
TGAAGACCTGCATAAGAGGC+TGG 0.544200 tig0028199:-31676 Msa1437210:CDS
TGATACTAACACAACGTTCG+AGG 0.546463 tig0028199:+41146 Msa1437210:intergenic
AACTAGCATTGATGATGGAA+CGG 0.548065 tig0028199:+31399 Msa1437210:intergenic
AACAGCTGAGAAACATGAAT+GGG 0.548330 tig0028199:-37390 Msa1437210:CDS
GAACGGGTGCTTGTGCTGGC+AGG 0.548345 tig0028199:+31416 Msa1437210:intergenic
TTGTAGAATTCGTTTGGCGA+AGG 0.549000 tig0028199:-33552 Msa1437210:intron
GCATGCCCACCTCATGCAAT+GGG 0.550739 tig0028199:-37886 Msa1437210:CDS
TGCATCATTGAGATGCTAAG+AGG 0.551180 tig0028199:-35216 Msa1437210:CDS
GGCCAATATGCTCATTCTGT+TGG 0.551977 tig0028199:-35195 Msa1437210:CDS
CATCATCCCATTGCATGAGG+TGG 0.552934 tig0028199:+37880 Msa1437210:intergenic
GGGAATGGCAGAAGGACACT+AGG 0.555612 tig0028199:-37325 Msa1437210:CDS
TGTCAATTGAAGGAGACTAC+CGG 0.555860 tig0028199:-38435 Msa1437210:CDS
TGATCTTCACTACAGGGAAA+GGG 0.555873 tig0028199:-37446 Msa1437210:CDS
CTAGTTGATATAGATGGTAG+TGG 0.556656 tig0028199:-31382 Msa1437210:CDS
GCATTGCAGTAAACTAGGAC+AGG 0.557438 tig0028199:+30827 Msa1437210:intergenic
GAACAGCTGAGAAACATGAA+TGG 0.557631 tig0028199:-37391 Msa1437210:CDS
GATTGCTCTAAGGTGCAAGC+AGG 0.561848 tig0028199:-31276 Msa1437210:three_prime_UTR
CACTTCAACTCAAAACAAGA+TGG 0.562475 tig0028199:+41027 Msa1437210:intergenic
ATCACAAAGCTTCTTTGCCA+AGG 0.563358 tig0028199:+33400 Msa1437210:intergenic
TCAATCAAAAGAGAAAATAG+TGG 0.563716 tig0028199:-31081 Msa1437210:three_prime_UTR
TGCTTCAATATAATGAAAGA+CGG 0.567370 tig0028199:+35158 Msa1437210:intergenic
CCTCAGAGACAACAATGCCC+TGG 0.567425 tig0028199:-37649 Msa1437210:intron
TTCCAATATAACATCACTGA+AGG 0.567580 tig0028199:+30964 Msa1437210:intergenic
CTGCTGTGAGGGCTGAAAAG+AGG 0.568371 tig0028199:-37534 Msa1437210:CDS
ATACAATGGCCAAACTGCCA+AGG 0.569363 tig0028199:+33468 Msa1437210:intergenic
TCAGTTTCTTGAAAACAAAG+TGG 0.569453 tig0028199:-36412 Msa1437210:CDS
GTAGCATACTTCAGTAGCAC+AGG 0.569812 tig0028199:+38381 Msa1437210:intergenic
TGGGTTCAGTTCAATTGGGA+GGG 0.569968 tig0028199:-37371 Msa1437210:CDS
CAGGTCTGATCTTCACTACA+GGG 0.570244 tig0028199:-37452 Msa1437210:CDS
AGACGATCTCAAAATCTCCC+TGG 0.571241 tig0028199:+33427 Msa1437210:intergenic
CCTGTAGTGAAGATCAGACC+TGG 0.572154 tig0028199:+37453 Msa1437210:intergenic
TCACATGGCTGTAATATAGT+CGG 0.579045 tig0028199:+35240 Msa1437210:intergenic
AACAAGATCTACAAGAAGCA+AGG 0.579321 tig0028199:-34624 Msa1437210:intron
ATCATCCCATTGCATGAGGT+GGG 0.580026 tig0028199:+37881 Msa1437210:intergenic
TTGAAGCTTGGAATTACTGA+TGG 0.582266 tig0028199:-36597 Msa1437210:CDS
GGTAATGGAGTCAATGGGGA+AGG 0.583473 tig0028199:+41441 Msa1437210:intergenic
TCAATATCCGCCTTAGAATG+TGG 0.585712 tig0028199:-38409 Msa1437210:CDS
GTTGGAAATCAGGCGTGCAA+TGG 0.586610 tig0028199:-31488 Msa1437210:CDS
TACAATGGCCAAACTGCCAA+GGG 0.586699 tig0028199:+33469 Msa1437210:intergenic
AAGGTTTCCATCTTACCTCA+AGG 0.587256 tig0028199:-31235 Msa1437210:three_prime_UTR
GCAATGGCAGGACCAAGCAT+GGG 0.592635 tig0028199:-31472 Msa1437210:CDS
GTCAGCACCCAGACTTGAGA+AGG 0.594095 tig0028199:+33374 Msa1437210:intergenic
ATGGGTTCAGTTCAATTGGG+AGG 0.607181 tig0028199:-37372 Msa1437210:CDS
GCGTGACACTGTACAAGCCA+GGG 0.608865 tig0028199:-33444 Msa1437210:CDS
CATTCCCCATCAATAGGAGG+TGG 0.612930 tig0028199:+37283 Msa1437210:intergenic
ACAATCTGGATGCTGCTGTG+AGG 0.614048 tig0028199:-37546 Msa1437210:CDS
AGCATCCAGATTGTCCACAT+GGG 0.616308 tig0028199:+37555 Msa1437210:intergenic
TACAGTGTCACGCAATACAA+TGG 0.617237 tig0028199:+33454 Msa1437210:intergenic
GGATAGCTGATAGAACTCAC+TGG 0.617565 tig0028199:-31136 Msa1437210:three_prime_UTR
GTAATGGAGTCAATGGGGAA+GGG 0.623908 tig0028199:+41442 Msa1437210:intergenic
CAAGAATGCTGCACCCCATG+TGG 0.627711 tig0028199:-37569 Msa1437210:CDS
AGAATGGAAGCAATAGCAGA+AGG 0.637263 tig0028199:-41349 Msa1437210:CDS
AGCCATTCCCCATCAATAGG+AGG 0.643958 tig0028199:+37280 Msa1437210:intergenic
GATGGTAGTGGTAGAAGACG+TGG 0.645989 tig0028199:-31370 Msa1437210:CDS
CATTATAAAAGAGCAAGCCA+GGG 0.646109 tig0028199:+37632 Msa1437210:intergenic
AGCACCACCTCCTATTGATG+GGG 0.647753 tig0028199:-37287 Msa1437210:CDS
GGAATGATGAAGAAGGATTG+TGG 0.649271 tig0028199:+41195 Msa1437210:intergenic
AGTTGACACATACTTATTTG+GGG 0.650368 tig0028199:-33523 Msa1437210:CDS
ATCTCAATGATGCATTCACA+TGG 0.652328 tig0028199:+35225 Msa1437210:intergenic
GGAATTACTGATGGTGTCAG+AGG 0.653217 tig0028199:-36588 Msa1437210:intron
TATCATCATCCCATTGCATG+AGG 0.653693 tig0028199:+37877 Msa1437210:intergenic
GTGGAAAGCGCATACAGTCG+GGG 0.661021 tig0028199:-37180 Msa1437210:CDS
GCATCCAGATTGTCCACATG+GGG 0.665416 tig0028199:+37556 Msa1437210:intergenic
GTGGGCATGCAATAATGAAG+TGG 0.679110 tig0028199:+37899 Msa1437210:intergenic
GGCATATCCACATTCTAAGG+CGG 0.680003 tig0028199:+38402 Msa1437210:intergenic
ACACATGCAAGAGCTAGTGA+AGG 0.693732 tig0028199:-37503 Msa1437210:CDS
GCAATAGCAGAAGGACTATG+GGG 0.694633 tig0028199:-41340 Msa1437210:CDS
AAACCGAGGAGAAATAGCAA+AGG 0.702576 tig0028199:-41299 Msa1437210:CDS
GCACATATTCTATCGTACGC+GGG 0.702651 tig0028199:-37602 Msa1437210:CDS
TGCACATATTCTATCGTACG+CGG 0.710853 tig0028199:-37603 Msa1437210:CDS
CTAAGGCGGATATTGAACCC+CGG 0.711903 tig0028199:+38416 Msa1437210:intergenic
ATACTTGACAGACAGCCTTG+AGG 0.715733 tig0028199:+31220 Msa1437210:intergenic
GCAGACCATCATGAAAACCG+AGG 0.718693 tig0028199:-41313 Msa1437210:CDS
ATACCGGATTAACTTCCATG+AGG 0.726850 tig0028199:+31325 Msa1437210:intergenic
ACAAGGTAATGGAGTCAATG+GGG 0.726917 tig0028199:+41437 Msa1437210:intergenic
TCAATTGAAGGAGACTACCG+GGG 0.731510 tig0028199:-38433 Msa1437210:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTAAAAAAATTATTAAAA+AGG + tig0028199:34097-34116 Msa1437210:intergenic 0.0%
!! ATTAAAAAAAAACATCAAAT+TGG + tig0028199:31194-31213 Msa1437210:intergenic 10.0%
!!! AATTTGATGTTTTTTTTTAA+TGG - tig0028199:31193-31212 Msa1437210:three_prime_UTR 10.0%
!!! ATTTGATGTTTTTTTTTAAT+GGG - tig0028199:31194-31213 Msa1437210:three_prime_UTR 10.0%
!! TATATATATTCATTCAAATA+AGG + tig0028199:32605-32624 Msa1437210:intergenic 10.0%
!!! TTTATTTATTTATTTCTGTT+TGG - tig0028199:32775-32794 Msa1437210:intron 10.0%
!!! TTTTTTTAATTCATAAATTC+TGG - tig0028199:33673-33692 Msa1437210:intron 10.0%
!!! TTTTTTAATTCATAAATTCT+GGG - tig0028199:33674-33693 Msa1437210:intron 10.0%
!!! TTTTTTGTTTATTTTATTGA+AGG - tig0028199:33781-33800 Msa1437210:intron 10.0%
!!! TTATAAAATAGTTTAAAACA+GGG + tig0028199:39420-39439 Msa1437210:intergenic 10.0%
!!! TTTTAAACTATTTTATAAGT+TGG - tig0028199:39422-39441 Msa1437210:intron 10.0%
!! TATTGTGAATTAATTATTAT+AGG - tig0028199:40991-41010 Msa1437210:CDS 10.0%
!!! TTTTTATTTTGTTTGAAACA+AGG + tig0028199:30874-30893 Msa0967290:intergenic 15.0%
!!! ATTCCATAGTTTTAAAAAAA+TGG + tig0028199:31932-31951 Msa1437210:intergenic 15.0%
!!! ATTTTTTTAAAACTATGGAA+TGG - tig0028199:31931-31950 Msa1437210:intron 15.0%
!! TTATTACGACAAATAAAAAT+TGG - tig0028199:32828-32847 Msa1437210:intron 15.0%
!! AATTAAGTAAACTAATGAAT+CGG + tig0028199:34009-34028 Msa1437210:intergenic 15.0%
!!! TTATTAAAAAGGTCATTTTA+GGG + tig0028199:34086-34105 Msa1437210:intergenic 15.0%
!!! ATTATTAAAAAGGTCATTTT+AGG + tig0028199:34087-34106 Msa1437210:intergenic 15.0%
!! TTTGAATCGAAAATAAAAAA+TGG - tig0028199:35264-35283 Msa1437210:CDS 15.0%
!! AACATAAAGAAAATAAAGAT+GGG + tig0028199:36547-36566 Msa1437210:intergenic 15.0%
!!! TTCAAATTTGAAATGATTAA+TGG - tig0028199:36855-36874 Msa1437210:intron 15.0%
!!! CAAAAATATGAAGTTATTTT+TGG + tig0028199:37344-37363 Msa1437210:intergenic 15.0%
!! TCAATTAATTAAACATTACA+TGG - tig0028199:38634-38653 Msa1437210:intron 15.0%
!! CAATTAATTAAACATTACAT+GGG - tig0028199:38635-38654 Msa1437210:intron 15.0%
!!! TATAAAATAGTTTAAAACAG+GGG + tig0028199:39419-39438 Msa1437210:intergenic 15.0%
!!! CTTATAAAATAGTTTAAAAC+AGG + tig0028199:39421-39440 Msa1437210:intergenic 15.0%
!!! CAAATTCAATTGTTTTTTTA+GGG + tig0028199:39805-39824 Msa1437210:intergenic 15.0%
!!! TCAAATTCAATTGTTTTTTT+AGG + tig0028199:39806-39825 Msa1437210:intergenic 15.0%
!! TACTATTTCAATATGATAAA+TGG + tig0028199:40656-40675 Msa1437210:intergenic 15.0%
!! ATTAATTCACAATAATATAC+CGG + tig0028199:40985-41004 Msa1437210:intergenic 15.0%
!!! CTTTTCATCTTTTAGTATTT+AGG - tig0028199:31421-31440 Msa1437210:CDS 20.0%
!!! TTTGGTATTATTTTGTATCA+GGG - tig0028199:31743-31762 Msa1437210:CDS 20.0%
!! AAACAGCAAATGTTAATATT+TGG + tig0028199:31801-31820 Msa1437210:intergenic 20.0%
!!! GAACCATTTTTTTAAAACTA+TGG - tig0028199:31926-31945 Msa1437210:intron 20.0%
!!! CATTTTTTTAAAACCTTGAA+TGG - tig0028199:32320-32339 Msa1437210:intron 20.0%
!!! ACAAATAATAACAAGTATTG+CGG - tig0028199:32437-32456 Msa1437210:intron 20.0%
!!! TGTTTTTATAAAAAGTGCAT+TGG - tig0028199:32728-32747 Msa1437210:intron 20.0%
!!! GTTTTTATAAAAAGTGCATT+GGG - tig0028199:32729-32748 Msa1437210:intron 20.0%
!! TCTGATAATATATATGTCAA+AGG - tig0028199:33597-33616 Msa1437210:intron 20.0%
!! TTAATAAATGCAATGAGATT+TGG - tig0028199:34455-34474 Msa1437210:intron 20.0%
!! TAATAAATGCAATGAGATTT+GGG - tig0028199:34456-34475 Msa1437210:intron 20.0%
!! GTGTTAGATTAAGTTAAAAA+AGG + tig0028199:34598-34617 Msa1437210:intergenic 20.0%
!!! TGCATAAATTTTACTTCTTT+TGG - tig0028199:35182-35201 Msa1437210:CDS 20.0%
!! GAAGAAAAATTATTTCCATA+AGG + tig0028199:35660-35679 Msa1437210:intergenic 20.0%
!!! TTTTGTCTTCTTTGTTTAAA+GGG + tig0028199:36067-36086 Msa1437210:intergenic 20.0%
!!! TTTTTGTCTTCTTTGTTTAA+AGG + tig0028199:36068-36087 Msa1437210:intergenic 20.0%
!! GGAAAAATACATAATACAAA+AGG - tig0028199:36288-36307 Msa1437210:intron 20.0%
!! AAAATACATAATACAAAAGG+AGG - tig0028199:36291-36310 Msa1437210:intron 20.0%
!! CAACATAAAGAAAATAAAGA+TGG + tig0028199:36548-36567 Msa1437210:intergenic 20.0%
!!! TTTTTCTTGTACTATTTTAG+TGG - tig0028199:36794-36813 Msa1437210:intron 20.0%
!!! TTTCAAATTTGAAGTATAAC+AGG + tig0028199:36848-36867 Msa1437210:intergenic 20.0%
!! TATAAAATTGTTTAGCATAG+TGG - tig0028199:36911-36930 Msa1437210:intron 20.0%
!!! TCAGATCTGAAATTTATTAA+TGG - tig0028199:36973-36992 Msa1437210:intron 20.0%
!!! ATTTTTATTCAAATTCGATC+AGG - tig0028199:37704-37723 Msa1437210:intron 20.0%
!! ATACAAACAAGACTATAAAT+TGG + tig0028199:37753-37772 Msa1437210:intergenic 20.0%
!!! AATTTATAGTCTTGTTTGTA+TGG - tig0028199:37752-37771 Msa1437210:intron 20.0%
!! TTGTTCAAAATAACTTATTC+TGG - tig0028199:37927-37946 Msa1437210:intron 20.0%
!!! AATTTTTGCTTATTAATTCC+AGG + tig0028199:38035-38054 Msa1437210:intergenic 20.0%
!! GTTTATCAATCAATAAATGT+AGG + tig0028199:38551-38570 Msa1437210:intergenic 20.0%
!! CAAAAAAAAAAAATGCAACT+TGG + tig0028199:38722-38741 Msa1437210:intergenic 20.0%
!!! TTTTTTTTGTAGAATTCGTT+TGG - tig0028199:38733-38752 Msa1437210:intron 20.0%
!!! ATAAAATAGTTTAAAACAGG+GGG + tig0028199:39418-39437 Msa1437210:intergenic 20.0%
!! GTGAATTAGATTAACTTAAT+TGG - tig0028199:39619-39638 Msa1437210:intron 20.0%
!! AGTGTAAAAATTAATGAATG+TGG + tig0028199:39727-39746 Msa1437210:intergenic 20.0%
!! CAGATAGATTCTTTATAATA+AGG - tig0028199:39880-39899 Msa1437210:intron 20.0%
!! ATGCGAATCTATAAAAAAAT+TGG + tig0028199:40075-40094 Msa1437210:intergenic 20.0%
!! TGACATGTTAACATTATAAT+AGG - tig0028199:41179-41198 Msa1437210:CDS 20.0%
!! GACATGTTAACATTATAATA+GGG - tig0028199:41180-41199 Msa1437210:CDS 20.0%
!! ACATGTTAACATTATAATAG+GGG - tig0028199:41181-41200 Msa1437210:CDS 20.0%
!!! AATTTTATGTATAGCACATT+TGG - tig0028199:41378-41397 Msa1437210:five_prime_UTR 20.0%
!!! TTTTGTTTGAAACAAGGTAA+TGG + tig0028199:30868-30887 Msa0967290:intergenic 25.0%
! AAGAAAGAAAGAAACAAGAA+TGG - tig0028199:30926-30945 Msa1437210:three_prime_UTR 25.0%
! AAACATCAAATTGGAACAAA+GGG + tig0028199:31185-31204 Msa1437210:intergenic 25.0%
! AAAACATCAAATTGGAACAA+AGG + tig0028199:31186-31205 Msa1437210:intergenic 25.0%
! ACAATTGTTAACATTATGCT+GGG + tig0028199:31564-31583 Msa1437210:intergenic 25.0%
! AACAATTGTTAACATTATGC+TGG + tig0028199:31565-31584 Msa1437210:intergenic 25.0%
!! ATATTTTGTAAGAGACGAAA+TGG + tig0028199:31616-31635 Msa1437210:intergenic 25.0%
! GAAAATGTTAGCAACTAATT+TGG + tig0028199:31644-31663 Msa1437210:intergenic 25.0%
!!! GTTTGGTATTATTTTGTATC+AGG - tig0028199:31742-31761 Msa1437210:CDS 25.0%
!!! GAAGGTTTTTGATATTTTTG+CGG - tig0028199:32022-32041 Msa1437210:intron 25.0%
!!! ATCCTTTTTCAACAATAAGA+GGG - tig0028199:32349-32368 Msa1437210:intron 25.0%
!!! TACCAATGAGTTTTGTTTTT+TGG - tig0028199:32486-32505 Msa1437210:intron 25.0%
! AACCAAAAAACAAAACTCAT+TGG + tig0028199:32491-32510 Msa1437210:intergenic 25.0%
! TATCTTGCTTTCTTAGTTAT+TGG - tig0028199:32518-32537 Msa1437210:intron 25.0%
!!! TTATGATTTGCTTGCTATTT+TGG - tig0028199:32626-32645 Msa1437210:intron 25.0%
!! ATAACAAGTTCTTTTAGACT+TGG + tig0028199:32945-32964 Msa1437210:intergenic 25.0%
! AGGAGAAAAATACTAACATT+TGG - tig0028199:33053-33072 Msa1437210:intron 25.0%
! AGCTTGTCATAATTTATAGA+AGG + tig0028199:33229-33248 Msa1437210:intergenic 25.0%
! TCTATAAATTATGACAAGCT+TGG - tig0028199:33229-33248 Msa1437210:intron 25.0%
! TGGTAAATACCAAATAGTTA+TGG - tig0028199:33323-33342 Msa1437210:intron 25.0%
!! AAAATGCTGGTTAGTATAAA+TGG - tig0028199:33346-33365 Msa1437210:intron 25.0%
!! AAATGCTGGTTAGTATAAAT+GGG - tig0028199:33347-33366 Msa1437210:intron 25.0%
! TTCCTTTATAATTTACACTC+TGG + tig0028199:33397-33416 Msa1437210:intergenic 25.0%
! AAATGTATGTATAGCTGTAT+AGG + tig0028199:33532-33551 Msa1437210:intergenic 25.0%
! TAATTCATAAATTCTGGGTT+TGG - tig0028199:33679-33698 Msa1437210:intron 25.0%
! AAGTGATGACTTAAGAATAA+GGG + tig0028199:34187-34206 Msa1437210:intergenic 25.0%
! AAAGTGATGACTTAAGAATA+AGG + tig0028199:34188-34207 Msa1437210:intergenic 25.0%
! AAAATTGTCATAATAGAAGC+TGG + tig0028199:34222-34241 Msa1437210:intergenic 25.0%
! AATTCCTTGTGTTATCATAA+TGG - tig0028199:34354-34373 Msa1437210:intron 25.0%
! ATCTGATAACTGTTGTATTT+GGG - tig0028199:35063-35082 Msa1437210:intron 25.0%
!!! AATTTTACTTCTTTTGGCTT+TGG - tig0028199:35188-35207 Msa1437210:CDS 25.0%
!! TGAAAGCATAAAAATCTTGT+AGG + tig0028199:35752-35771 Msa1437210:intergenic 25.0%
! CAACAACAAATAAAAGAAGT+AGG - tig0028199:36107-36126 Msa1437210:intron 25.0%
!!! TTTTAGCGTTTAAAACAGTT+TGG - tig0028199:36511-36530 Msa1437210:intron 25.0%
! CATTTAATATCCACCTTATT+AGG - tig0028199:36752-36771 Msa1437210:intron 25.0%
!!! TTTTAGTGGATTTGAAAAGT+TGG - tig0028199:36808-36827 Msa1437210:intron 25.0%
!! TTTCAGATCTGAAATATAAC+AGG + tig0028199:36965-36984 Msa1437210:intergenic 25.0%
! TGCTTCAATATAATGAAAGA+CGG + tig0028199:37136-37155 Msa1437210:intergenic 25.0%
! TCATTATATTGAAGCAGTAA+AGG - tig0028199:37140-37159 Msa1437210:intron 25.0%
! ATAATGATATGAACTGTTGA+TGG - tig0028199:37300-37319 Msa1437210:CDS 25.0%
! TAATGATATGAACTGTTGAT+GGG - tig0028199:37301-37320 Msa1437210:CDS 25.0%
! AGTTGTACCTCTAATTTAAT+TGG - tig0028199:37463-37482 Msa1437210:CDS 25.0%
! AAAAAAAAAATAACGCCCAT+GGG + tig0028199:37519-37538 Msa1437210:intergenic 25.0%
! AAAAAAAAAAATAACGCCCA+TGG + tig0028199:37520-37539 Msa1437210:intergenic 25.0%
!!! AAGTAATGGATTCTTTTGTA+GGG - tig0028199:37592-37611 Msa1437210:CDS 25.0%
! GTTATAGAAAGTAGAAACAT+TGG + tig0028199:37778-37797 Msa1437210:intergenic 25.0%
! GAAAAATTCAACAAAAGTCT+TGG + tig0028199:37841-37860 Msa1437210:intergenic 25.0%
! AAATTGAAGAATGATAGTTG+TGG + tig0028199:37909-37928 Msa1437210:intergenic 25.0%
!!! TATAAGCATGTTTTTTTTCC+TGG - tig0028199:38014-38033 Msa1437210:intron 25.0%
!!! TCTCGATTCTTTTATTTCAA+TGG - tig0028199:38610-38629 Msa1437210:intron 25.0%
! GAAATAGAAACATCAAACTA+AGG + tig0028199:38687-38706 Msa1437210:intergenic 25.0%
! AAAAAAAAAATGCAACTTGG+AGG + tig0028199:38719-38738 Msa1437210:intergenic 25.0%
!! AATATTGGGAAATAAGTTGA+AGG + tig0028199:38796-38815 Msa1437210:intergenic 25.0%
! TATTTCCCAAACTATAACTT+GGG + tig0028199:39014-39033 Msa1437210:intergenic 25.0%
! TATAAAATCAGAGATTAACG+AGG + tig0028199:39489-39508 Msa1437210:intergenic 25.0%
!! TAATTTTTACACTGTTCTCT+TGG - tig0028199:39734-39753 Msa1437210:intron 25.0%
! AGTGAGAAATTCAAGATAAT+AGG - tig0028199:39846-39865 Msa1437210:intron 25.0%
! GTGAGAAATTCAAGATAATA+GGG - tig0028199:39847-39866 Msa1437210:intron 25.0%
! TGAGAAATTCAAGATAATAG+GGG - tig0028199:39848-39867 Msa1437210:intron 25.0%
! ATAATAAGGAAAAACCATAG+AGG - tig0028199:39894-39913 Msa1437210:intron 25.0%
! TAATAAGGAAAAACCATAGA+GGG - tig0028199:39895-39914 Msa1437210:intron 25.0%
!! TACGATTTTATGATTAAGTG+AGG + tig0028199:39991-40010 Msa1437210:intergenic 25.0%
! CACTTAATCATAAAATCGTA+TGG - tig0028199:39991-40010 Msa1437210:intron 25.0%
! TTTATGACTCTAGTTATCAA+AGG - tig0028199:40015-40034 Msa1437210:intron 25.0%
! GCTTACAAAATTGTTAAACT+TGG - tig0028199:40049-40068 Msa1437210:intron 25.0%
! TGAACTAGTCAATAACATAA+TGG - tig0028199:40117-40136 Msa1437210:intron 25.0%
!! GGTTTTCAAACAAAAAAACT+TGG + tig0028199:40178-40197 Msa1437210:intergenic 25.0%
! AAAACTCATTAAATCTCCAT+AGG + tig0028199:40328-40347 Msa1437210:intergenic 25.0%
!! TGAATCAAAGTTTTCAAACA+TGG + tig0028199:40358-40377 Msa1437210:intergenic 25.0%
! AAAACTTTGATTCAAACCAT+TGG - tig0028199:40364-40383 Msa1437210:intron 25.0%
! AAACTTTGATTCAAACCATT+GGG - tig0028199:40365-40384 Msa1437210:intron 25.0%
!! GCAGCTTTATATAAAGAATT+AGG - tig0028199:40544-40563 Msa1437210:intron 25.0%
! TATAAAGAATTAGGAGAAAG+AGG - tig0028199:40553-40572 Msa1437210:intron 25.0%
! TCTCAATCTGTTAATCAAAA+CGG + tig0028199:40752-40771 Msa1437210:intergenic 25.0%
! TCAATCAAAAGAGAAAATAG+TGG - tig0028199:41210-41229 Msa1437210:CDS 25.0%
AACATCAAATTGGAACAAAG+GGG + tig0028199:31184-31203 Msa1437210:intergenic 30.0%
!! TTAAACAAAACCTGTTTCTG+AGG + tig0028199:31342-31361 Msa1437210:intergenic 30.0%
!!! TCAGAAACAGGTTTTGTTTA+AGG - tig0028199:31341-31360 Msa1437210:exon 30.0%
!!! CAGAAACAGGTTTTGTTTAA+GGG - tig0028199:31342-31361 Msa1437210:exon 30.0%
! TTTTGTATCAGGGAGTTAAT+TGG - tig0028199:31753-31772 Msa1437210:intron 30.0%
TTTGTATCAGGGAGTTAATT+GGG - tig0028199:31754-31773 Msa1437210:intron 30.0%
GAAACTGTATTAACCACTAT+TGG + tig0028199:31883-31902 Msa1437210:intergenic 30.0%
! TTTAAAACCTTGCTCAAAGA+CGG - tig0028199:32081-32100 Msa1437210:intron 30.0%
! TGTCAAGACATCATGATTTT+TGG + tig0028199:32289-32308 Msa1437210:intergenic 30.0%
AAAATCATGATGTCTTGACA+AGG - tig0028199:32289-32308 Msa1437210:intron 30.0%
AAATCATGATGTCTTGACAA+GGG - tig0028199:32290-32309 Msa1437210:intron 30.0%
CTCTTATTGTTGAAAAAGGA+TGG + tig0028199:32350-32369 Msa1437210:intergenic 30.0%
!!! CATCCTTTTTCAACAATAAG+AGG - tig0028199:32348-32367 Msa1437210:intron 30.0%
AACCCTCTTATTGTTGAAAA+AGG + tig0028199:32354-32373 Msa1437210:intergenic 30.0%
AGAGGGTTATATGAAAAACT+TGG - tig0028199:32366-32385 Msa1437210:intron 30.0%
TTTGTAGGTTGTGTACAAAA+GGG - tig0028199:32571-32590 Msa1437210:intron 30.0%
TTAGAACATATTAGCATGTC+TGG - tig0028199:32655-32674 Msa1437210:intron 30.0%
!! TTATTTCTGTTTGGTTCCAT+TGG - tig0028199:32784-32803 Msa1437210:intron 30.0%
! CTGTTTGATTTAGATTCCAA+TGG + tig0028199:32803-32822 Msa1437210:intergenic 30.0%
! AAAAAACAGTACCGAACTAT+AGG - tig0028199:32901-32920 Msa1437210:intron 30.0%
! AAAAACAGTACCGAACTATA+GGG - tig0028199:32902-32921 Msa1437210:intron 30.0%
TAACAGTTAGTTAACTAGAG+AGG + tig0028199:33138-33157 Msa1437210:intergenic 30.0%
! CAGCATTTTCCATAACTATT+TGG + tig0028199:33335-33354 Msa1437210:intergenic 30.0%
CAAATAGTTATGGAAAATGC+TGG - tig0028199:33333-33352 Msa1437210:intron 30.0%
CACCAGAGTGTAAATTATAA+AGG - tig0028199:33392-33411 Msa1437210:CDS 30.0%
AGCATAAATAATAGGGGATA+TGG + tig0028199:33440-33459 Msa1437210:intergenic 30.0%
AGGGACAAGCATAAATAATA+GGG + tig0028199:33447-33466 Msa1437210:intergenic 30.0%
GATATGAATGTGTGAAAAGA+GGG + tig0028199:33466-33485 Msa1437210:intergenic 30.0%
TGATATGAATGTGTGAAAAG+AGG + tig0028199:33467-33486 Msa1437210:intergenic 30.0%
ACTCATGTGGAAAAAGTAAA+AGG + tig0028199:33570-33589 Msa1437210:intergenic 30.0%
GTTGAATATTGATGAACAAC+TGG - tig0028199:33635-33654 Msa1437210:intron 30.0%
AAGAATAAGGGAAGGAAAAA+AGG + tig0028199:34175-34194 Msa1437210:intergenic 30.0%
! TAGCAAACTAAAAGCACAAT+TGG + tig0028199:34310-34329 Msa1437210:intergenic 30.0%
TTAAGTTAAAAAAGGACTCG+TGG + tig0028199:34590-34609 Msa1437210:intergenic 30.0%
! TCTCTTGAACCAGTATATTT+TGG - tig0028199:34945-34964 Msa1437210:intron 30.0%
! CTCTTGAACCAGTATATTTT+GGG - tig0028199:34946-34965 Msa1437210:intron 30.0%
GATCTGATAACTGTTGTATT+TGG - tig0028199:35062-35081 Msa1437210:intron 30.0%
! ACTCCTTAAAAAGTCCTTTT+GGG + tig0028199:35091-35110 Msa1437210:intergenic 30.0%
! TTGGATTGATTTATTGCTTG+TGG - tig0028199:35207-35226 Msa1437210:CDS 30.0%
ATCATTAGACTGCAAATTCA+AGG - tig0028199:35235-35254 Msa1437210:CDS 30.0%
TCATTAGACTGCAAATTCAA+GGG - tig0028199:35236-35255 Msa1437210:CDS 30.0%
! GCAAGTAAAAAGGTATAACT+CGG + tig0028199:35359-35378 Msa1437210:intergenic 30.0%
CACAACAGCAATGAATAATA+AGG + tig0028199:35591-35610 Msa1437210:intergenic 30.0%
TAAGGAAAATGAGTCTAAAG+CGG + tig0028199:35642-35661 Msa1437210:intergenic 30.0%
! CTTTAGACTCATTTTCCTTA+TGG - tig0028199:35642-35661 Msa1437210:intron 30.0%
TCAGTTTCTTGAAAACAAAG+TGG - tig0028199:35879-35898 Msa1437210:intron 30.0%
GGTTATGTCAATGCTATTAA+CGG - tig0028199:35946-35965 Msa1437210:intron 30.0%
CAAATAAAAGAAGTAGGACA+AGG - tig0028199:36113-36132 Msa1437210:intron 30.0%
AGATATGCATAGCAGAATAA+TGG - tig0028199:36232-36251 Msa1437210:intron 30.0%
GATATGCATAGCAGAATAAT+GGG - tig0028199:36233-36252 Msa1437210:intron 30.0%
! ATGGTGGAACTTAGAAAATA+TGG - tig0028199:36267-36286 Msa1437210:intron 30.0%
AAAAGGAGGAAAACAAAACA+TGG - tig0028199:36305-36324 Msa1437210:intron 30.0%
! CAGTTTTCTCAAGTAAATCA+TGG + tig0028199:36342-36361 Msa1437210:intergenic 30.0%
TTAATATCCACCTTATTAGG+TGG - tig0028199:36755-36774 Msa1437210:intron 30.0%
! CTTTGGTTCAGATGAAAAAT+TGG - tig0028199:37016-37035 Msa1437210:intron 30.0%
! AGATGAAAAATTGGTTCATG+CGG - tig0028199:37025-37044 Msa1437210:intron 30.0%
AATGATATGAACTGTTGATG+GGG - tig0028199:37302-37321 Msa1437210:CDS 30.0%
!! TCATATTTTTGTGTAGCTCA+CGG - tig0028199:37353-37372 Msa1437210:CDS 30.0%
GAATCCATTACTTCATAAAC+TGG + tig0028199:37585-37604 Msa1437210:intergenic 30.0%
!!! GAAGTAATGGATTCTTTTGT+AGG - tig0028199:37591-37610 Msa1437210:CDS 30.0%
!!! AGTAATGGATTCTTTTGTAG+GGG - tig0028199:37593-37612 Msa1437210:CDS 30.0%
CAAATAATGATGAGATACTG+AGG + tig0028199:38134-38153 Msa1437210:intergenic 30.0%
!! CAATTTTGATGAGTATTCAC+TGG + tig0028199:38292-38311 Msa1437210:intergenic 30.0%
AAAGGAGAAATAAATTCAGC+CGG + tig0028199:38383-38402 Msa1437210:intergenic 30.0%
CAGTTGACACATACTTATTT+GGG - tig0028199:38767-38786 Msa1437210:intron 30.0%
AGTTGACACATACTTATTTG+GGG - tig0028199:38768-38787 Msa1437210:intron 30.0%
CTATTTCCCAAACTATAACT+TGG + tig0028199:39015-39034 Msa1437210:intergenic 30.0%
!! AAATGTTGTTTAAGAGTGTC+TGG - tig0028199:39123-39142 Msa1437210:intron 30.0%
TGGTATTCTAATGTTAGTTC+TGG - tig0028199:39238-39257 Msa1437210:intron 30.0%
TAACCTTGCTAATCTTATCA+AGG - tig0028199:39562-39581 Msa1437210:intron 30.0%
TGGTATTAGTGATCTGATAT+AGG - tig0028199:39639-39658 Msa1437210:intron 30.0%
AAAAAACTGACACATACATC+AGG + tig0028199:39691-39710 Msa1437210:intergenic 30.0%
!!! TCAGTTTTTTAGCAGATCAA+AGG - tig0028199:39701-39720 Msa1437210:intron 30.0%
TTATCTTGAATTTCTCACTC+TGG + tig0028199:39845-39864 Msa1437210:intergenic 30.0%
!!! ATGTGTGTTGATTTTATCCA+TGG - tig0028199:39955-39974 Msa1437210:intron 30.0%
ATGCATGCCTAAAATAACAA+TGG - tig0028199:40152-40171 Msa1437210:intron 30.0%
!!! AACTTGGCCATTGTTATTTT+AGG + tig0028199:40162-40181 Msa1437210:intergenic 30.0%
! TCATTCAACTGTTGCATTTT+AGG + tig0028199:40199-40218 Msa1437210:intergenic 30.0%
AATGCAACAGTTGAATGATA+AGG - tig0028199:40201-40220 Msa1437210:intron 30.0%
TAGAAAACTGTAAGATCAAG+CGG + tig0028199:40296-40315 Msa1437210:intergenic 30.0%
GTATTTATACAGGACTAACT+CGG - tig0028199:40391-40410 Msa1437210:intron 30.0%
ATTTCCAACTCATGTAATTG+TGG + tig0028199:40792-40811 Msa1437210:intergenic 30.0%
CTTGATATTCCAGAATCTAT+TGG - tig0028199:40852-40871 Msa1437210:intron 30.0%
!! ATATCAACTAGCATTGATGA+TGG + tig0028199:40900-40919 Msa1437210:intergenic 30.0%
! TCAATGCTAGTTGATATAGA+TGG - tig0028199:40903-40922 Msa1437210:intron 30.0%
! AGAATTTAGTGTTTTCCTCA+TGG - tig0028199:40951-40970 Msa1437210:CDS 30.0%
TATTATAGGTGATTGCTCTA+AGG - tig0028199:41005-41024 Msa1437210:CDS 30.0%
GCATACTAAATTAACTGTAC+AGG + tig0028199:41114-41133 Msa1437210:intergenic 30.0%
AAAAGAGAAAATAGTGGTGT+AGG - tig0028199:41216-41235 Msa1437210:CDS 30.0%
ATCCTTCAGTGATGTTATAT+TGG - tig0028199:41325-41344 Msa1437210:CDS 30.0%
TTCCAATATAACATCACTGA+AGG + tig0028199:41330-41349 Msa1437210:intergenic 30.0%
ATATTGCATTGCAGTAAACT+AGG + tig0028199:41472-41491 Msa1437210:intergenic 30.0%
!! AACAAGGTAATGGAGTCAAT+GGG + tig0028199:30858-30877 Msa0967290:intergenic 35.0%
!! AAACAAGGTAATGGAGTCAA+TGG + tig0028199:30859-30878 Msa0967290:intergenic 35.0%
!!! GAGTTTTGACTTCAACGATT+GGG + tig0028199:31064-31083 Msa1437210:intergenic 35.0%
TTTAGCGTGATTAGCGTTAT+GGG + tig0028199:31120-31139 Msa1437210:intergenic 35.0%
ATTTAGCGTGATTAGCGTTA+TGG + tig0028199:31121-31140 Msa1437210:intergenic 35.0%
AAATTGGAACAAAGGGGTTA+AGG + tig0028199:31178-31197 Msa1437210:intergenic 35.0%
! GTTGTAGCAATTGTTGTTGA+AGG - tig0028199:31236-31255 Msa1437210:three_prime_UTR 35.0%
CACTTCAACTCAAAACAAGA+TGG + tig0028199:31267-31286 Msa1437210:intergenic 35.0%
AGTCAGTGTTATCATCTTGT+TGG - tig0028199:31306-31325 Msa1437210:three_prime_UTR 35.0%
! TGCTAACATTTTCACACTGA+AGG - tig0028199:31651-31670 Msa1437210:CDS 35.0%
TCCCCAATTTGAAAATGTCA+AGG - tig0028199:31715-31734 Msa1437210:CDS 35.0%
! CCCTTGACATTTTCAAATTG+GGG + tig0028199:31719-31738 Msa1437210:intergenic 35.0%
CCCCAATTTGAAAATGTCAA+GGG - tig0028199:31716-31735 Msa1437210:CDS 35.0%
! GCCCTTGACATTTTCAAATT+GGG + tig0028199:31720-31739 Msa1437210:intergenic 35.0%
! AGCCCTTGACATTTTCAAAT+TGG + tig0028199:31721-31740 Msa1437210:intergenic 35.0%
GAAAAGTCATTGTCCAATAG+TGG - tig0028199:31867-31886 Msa1437210:intron 35.0%
! TTTGTGCTTTGTTCAACAGT+AGG - tig0028199:31956-31975 Msa1437210:intron 35.0%
! TTGTGCTTTGTTCAACAGTA+GGG - tig0028199:31957-31976 Msa1437210:intron 35.0%
CAATTTCGACTGTGATATGA+AGG - tig0028199:32004-32023 Msa1437210:intron 35.0%
!!! CGGCATAACAATTTTTTGCT+AGG + tig0028199:32129-32148 Msa1437210:intergenic 35.0%
AGCAAAAAATTGTTATGCCG+CGG - tig0028199:32129-32148 Msa1437210:intron 35.0%
!!! TCATTTTCTAAAACCCCGAT+AGG - tig0028199:32170-32189 Msa1437210:intron 35.0%
ACAACAAGATGAAGACCTAT+CGG + tig0028199:32188-32207 Msa1437210:intergenic 35.0%
CACAGAATTGCAATCAAATG+TGG - tig0028199:32222-32241 Msa1437210:intron 35.0%
!! TGTGGTTGATACAGTTTTAC+TGG - tig0028199:32240-32259 Msa1437210:intron 35.0%
! TTTTACTGGCAGTCAAATTG+CGG - tig0028199:32254-32273 Msa1437210:intron 35.0%
AAAGGATGGTATTCCATTCA+AGG + tig0028199:32336-32355 Msa1437210:intergenic 35.0%
AAAACTTGGCAACCACAATT+TGG - tig0028199:32380-32399 Msa1437210:intron 35.0%
AAACTTGGCAACCACAATTT+GGG - tig0028199:32381-32400 Msa1437210:intron 35.0%
TGATACAACAACCCAAATTG+TGG + tig0028199:32395-32414 Msa1437210:intergenic 35.0%
!! GTAATCAAGATTTTAGCCTG+TGG + tig0028199:32469-32488 Msa1437210:intergenic 35.0%
GATTGATCAATCCTCATTTG+CGG - tig0028199:32540-32559 Msa1437210:intron 35.0%
CTTTGTAGGTTGTGTACAAA+AGG - tig0028199:32570-32589 Msa1437210:intron 35.0%
TCTTCTGTATCCCTATAGTT+CGG + tig0028199:32915-32934 Msa1437210:intergenic 35.0%
! ACAAGTTCTTTTAGACTTGG+AGG + tig0028199:32942-32961 Msa1437210:intergenic 35.0%
ATTAGTTACTCTGTGAGAGA+TGG - tig0028199:32966-32985 Msa1437210:intron 35.0%
TTAGTTACTCTGTGAGAGAT+GGG - tig0028199:32967-32986 Msa1437210:intron 35.0%
TGAGCTAAGGGTTTAAAGAA+TGG - tig0028199:33004-33023 Msa1437210:intron 35.0%
GAGCTAAGGGTTTAAAGAAT+GGG - tig0028199:33005-33024 Msa1437210:intron 35.0%
!! TACTGCCATACTTTTAACTG+AGG - tig0028199:33156-33175 Msa1437210:intron 35.0%
GGGACAAGCATAAATAATAG+GGG + tig0028199:33446-33465 Msa1437210:intergenic 35.0%
GAGGGACAAGCATAAATAAT+AGG + tig0028199:33448-33467 Msa1437210:intergenic 35.0%
ATCAGACACAAATACTCATG+TGG + tig0028199:33583-33602 Msa1437210:intergenic 35.0%
AACATGCAATGCAGTCAAAT+TGG + tig0028199:33756-33775 Msa1437210:intergenic 35.0%
GAAGGATTTCAACAAAGTTG+TGG - tig0028199:33799-33818 Msa1437210:intron 35.0%
GCAAATGCTTTGTCAATTGA+AGG - tig0028199:33846-33865 Msa1437210:intron 35.0%
AGTTGCAGGTTAGTAATGAA+AGG - tig0028199:33937-33956 Msa1437210:intron 35.0%
AACTAATACGTAGAACCTTC+TGG - tig0028199:34034-34053 Msa1437210:intron 35.0%
TTAAAGACAAAGCTTCCAGA+AGG + tig0028199:34052-34071 Msa1437210:intergenic 35.0%
!!! AAAGGTCATTTTAGGGCTTT+TGG + tig0028199:34079-34098 Msa1437210:intergenic 35.0%
GATGACTTAAGAATAAGGGA+AGG + tig0028199:34183-34202 Msa1437210:intergenic 35.0%
TGGTCCATTATGATAACACA+AGG + tig0028199:34361-34380 Msa1437210:intergenic 35.0%
GCAATGGGATGATGATAATT+TGG - tig0028199:34420-34439 Msa1437210:intron 35.0%
ACATTTGCACTCACTTTATC+TGG + tig0028199:34493-34512 Msa1437210:intergenic 35.0%
CATTATAAAAGAGCAAGCCA+GGG + tig0028199:34662-34681 Msa1437210:intergenic 35.0%
TCATTATAAAAGAGCAAGCC+AGG + tig0028199:34663-34682 Msa1437210:intergenic 35.0%
TCTTAGATCAAAGTCTTTCC+AGG - tig0028199:34820-34839 Msa1437210:intron 35.0%
AACAGCTGAGAAACATGAAT+GGG - tig0028199:34901-34920 Msa1437210:CDS 35.0%
! ATGAATGGGTTCAGTTCAAT+TGG - tig0028199:34915-34934 Msa1437210:CDS 35.0%
! TGAATGGGTTCAGTTCAATT+GGG - tig0028199:34916-34935 Msa1437210:CDS 35.0%
!! GAACCAGTATATTTTGGGAA+TGG - tig0028199:34951-34970 Msa1437210:intron 35.0%
!! TATATTTTGGGAATGGCAGA+AGG - tig0028199:34958-34977 Msa1437210:intron 35.0%
! AGTGCATAGATAGCACTTTT+AGG + tig0028199:35038-35057 Msa1437210:intergenic 35.0%
! CACTCCTTAAAAAGTCCTTT+TGG + tig0028199:35092-35111 Msa1437210:intergenic 35.0%
!! AAAGGACTTTTTAAGGAGTG+TGG - tig0028199:35092-35111 Msa1437210:intron 35.0%
! CAGTGAAAGTGCAAGTAAAA+AGG + tig0028199:35369-35388 Msa1437210:intergenic 35.0%
!!! TGTCTTTTCTGTTGGTTTCT+AGG - tig0028199:35444-35463 Msa1437210:intron 35.0%
GATCAGTAGCATAACTCATT+TGG - tig0028199:35501-35520 Msa1437210:intron 35.0%
! GTTTCTGTTATTTGCGCAAA+TGG - tig0028199:35561-35580 Msa1437210:intron 35.0%
TTGAAGCTTGGAATTACTGA+TGG - tig0028199:35694-35713 Msa1437210:intron 35.0%
GCAACACTCTTCTATCTATA+TGG - tig0028199:35831-35850 Msa1437210:intron 35.0%
ATGCTATTAACGGCTTATTG+TGG - tig0028199:35956-35975 Msa1437210:intron 35.0%
TTATTGTGGTTCATGATGAC+AGG - tig0028199:35970-35989 Msa1437210:intron 35.0%
! ATAATGGGACAAGAAAGGAA+TGG - tig0028199:36248-36267 Msa1437210:intron 35.0%
CTTGAGAAAACTGAAGTCAT+TGG - tig0028199:36349-36368 Msa1437210:intron 35.0%
TTTACACTCAACTCACTGAA+TGG + tig0028199:36485-36504 Msa1437210:intergenic 35.0%
! CAGTGAGTTGAGTGTAAAAT+AGG - tig0028199:36487-36506 Msa1437210:intron 35.0%
GTAAGTCACTATTTCCATGA+CGG + tig0028199:36588-36607 Msa1437210:intergenic 35.0%
ATGACCGTCATTTAAGAATG+AGG - tig0028199:36675-36694 Msa1437210:intron 35.0%
TGACCGTCATTTAAGAATGA+GGG - tig0028199:36676-36695 Msa1437210:intron 35.0%
TCACATGGCTGTAATATAGT+CGG + tig0028199:37054-37073 Msa1437210:intergenic 35.0%
ATCTCAATGATGCATTCACA+TGG + tig0028199:37069-37088 Msa1437210:intergenic 35.0%
! GAAGCAGTAAAGGTACATAT+AGG - tig0028199:37150-37169 Msa1437210:intron 35.0%
!! ACACATTCATATGCTGCTTT+AGG - tig0028199:37243-37262 Msa1437210:CDS 35.0%
! GCTTTAGCTTACTTAAGATC+AGG - tig0028199:37265-37284 Msa1437210:CDS 35.0%
! TGTTGATGGGGATAACTTAA+TGG - tig0028199:37314-37333 Msa1437210:CDS 35.0%
AAGAAACAGCTGCATAAACT+TGG + tig0028199:37404-37423 Msa1437210:intergenic 35.0%
!! GCTGTTTCTTATATCTGCAT+TGG - tig0028199:37414-37433 Msa1437210:CDS 35.0%
TGATGCTGAATCTAATTCAC+AGG - tig0028199:37437-37456 Msa1437210:CDS 35.0%
AGTAGCGCCAATTAAATTAG+AGG + tig0028199:37473-37492 Msa1437210:intergenic 35.0%
!!! CTACTTACTTTTTCTAACGC+AGG - tig0028199:37488-37507 Msa1437210:CDS 35.0%
AACAAGATCTACAAGAAGCA+AGG - tig0028199:37667-37686 Msa1437210:intron 35.0%
! ATGCCAGTTCAATAGTTTTC+TGG + tig0028199:38259-38278 Msa1437210:intergenic 35.0%
TATTGAACTGGCATCATATC+TGG - tig0028199:38265-38284 Msa1437210:intron 35.0%
GCCAGATTTAGTATTTGACT+GGG + tig0028199:38336-38355 Msa1437210:intergenic 35.0%
AGCCAGATTTAGTATTTGAC+TGG + tig0028199:38337-38356 Msa1437210:intergenic 35.0%
ACCAGCCAAATCATTTAAAC+CGG - tig0028199:38361-38380 Msa1437210:intron 35.0%
! TTCAGCCGGTTTAAATGATT+TGG + tig0028199:38369-38388 Msa1437210:intergenic 35.0%
! TGTTGTTTGGTGAAATGGAA+AGG + tig0028199:38401-38420 Msa1437210:intergenic 35.0%
!! AAATTGGTGCACTTGTTGTT+TGG + tig0028199:38414-38433 Msa1437210:intergenic 35.0%
GCAGTTGACACATACTTATT+TGG - tig0028199:38766-38785 Msa1437210:intron 35.0%
TCCCAATATTTAACAACCCT+TGG - tig0028199:38806-38825 Msa1437210:intron 35.0%
GCCAAGGGTTGTTAAATATT+GGG + tig0028199:38810-38829 Msa1437210:intergenic 35.0%
TGCCAAGGGTTGTTAAATAT+TGG + tig0028199:38811-38830 Msa1437210:intergenic 35.0%
AATGTGCCCAAGTTATAGTT+TGG - tig0028199:39005-39024 Msa1437210:intron 35.0%
ATGTGCCCAAGTTATAGTTT+GGG - tig0028199:39006-39025 Msa1437210:intron 35.0%
ACTGCAAGAAATGAAAGACA+CGG + tig0028199:39080-39099 Msa1437210:intergenic 35.0%
! TCTTTTATCTCTGAACTGCA+TGG - tig0028199:39162-39181 Msa1437210:intron 35.0%
! CTTTTATCTCTGAACTGCAT+GGG - tig0028199:39163-39182 Msa1437210:intron 35.0%
TGTTTGAGTATTACTCTGCA+TGG - tig0028199:39218-39237 Msa1437210:intron 35.0%
GTGTAGATTTCCTGAATCAA+GGG + tig0028199:39293-39312 Msa1437210:intergenic 35.0%
! TGGGGAAAACTATGTGTTTT+AGG + tig0028199:39365-39384 Msa1437210:intergenic 35.0%
AAAAGGATTATCCTACGAGT+GGG + tig0028199:39384-39403 Msa1437210:intergenic 35.0%
AAAAAGGATTATCCTACGAG+TGG + tig0028199:39385-39404 Msa1437210:intergenic 35.0%
! ACTCGTAGGATAATCCTTTT+TGG - tig0028199:39384-39403 Msa1437210:intron 35.0%
! AATAGTTTAAAACAGGGGGA+GGG + tig0028199:39414-39433 Msa1437210:intergenic 35.0%
! AAATAGTTTAAAACAGGGGG+AGG + tig0028199:39415-39434 Msa1437210:intergenic 35.0%
CTTCCTTGATAAGATTAGCA+AGG + tig0028199:39568-39587 Msa1437210:intergenic 35.0%
TATAGGTCTGTAGATTCTGT+AGG - tig0028199:39656-39675 Msa1437210:intron 35.0%
ATAGGTCTGTAGATTCTGTA+GGG - tig0028199:39657-39676 Msa1437210:intron 35.0%
GGAAACTTCAAATTCTTGTC+AGG + tig0028199:39784-39803 Msa1437210:intergenic 35.0%
TTCACAAAACATTCCCTCTA+TGG + tig0028199:39911-39930 Msa1437210:intergenic 35.0%
TCGCATAGAATCAAAAGTTG+AGG - tig0028199:40089-40108 Msa1437210:intron 35.0%
CGCATAGAATCAAAAGTTGA+GGG - tig0028199:40090-40109 Msa1437210:intron 35.0%
AGTTGAATGATAAGGCTAAG+TGG - tig0028199:40209-40228 Msa1437210:intron 35.0%
!!! AATCGCGATTTTAACTACCA+TGG + tig0028199:40261-40280 Msa1437210:intergenic 35.0%
AGAAAACTGTAAGATCAAGC+GGG + tig0028199:40295-40314 Msa1437210:intergenic 35.0%
! TTTTCTACGATTTGAGCCTA+TGG - tig0028199:40309-40328 Msa1437210:intron 35.0%
CTGTATAAATACTTGCCCAA+TGG + tig0028199:40383-40402 Msa1437210:intergenic 35.0%
CATTGGGCAAGTATTTATAC+AGG - tig0028199:40381-40400 Msa1437210:intron 35.0%
AGGAGAAAGAGGAAATGAAT+TGG - tig0028199:40564-40583 Msa1437210:intron 35.0%
AGTTCCACAATTACATGAGT+TGG - tig0028199:40785-40804 Msa1437210:intron 35.0%
AGATTATTAACTCCCATGCT+TGG + tig0028199:40834-40853 Msa1437210:intergenic 35.0%
!! AACTAGCATTGATGATGGAA+CGG + tig0028199:40895-40914 Msa1437210:intergenic 35.0%
! CTAGTTGATATAGATGGTAG+TGG - tig0028199:40909-40928 Msa1437210:intron 35.0%
TTTCCTCATGGAAGTTAATC+CGG - tig0028199:40963-40982 Msa1437210:CDS 35.0%
ACTCATTAAGTTACATGAGC+AGG - tig0028199:41134-41153 Msa1437210:intron 35.0%
! ATAGTGGTGTAGGTTTTCTA+AGG - tig0028199:41226-41245 Msa1437210:CDS 35.0%
!! ACAAGGTAATGGAGTCAATG+GGG + tig0028199:30857-30876 Msa0967290:intergenic 40.0%
AGAATGGAAGCAATAGCAGA+AGG - tig0028199:30942-30961 Msa1437210:three_prime_UTR 40.0%
AAGCAATAGCAGAAGGACTA+TGG - tig0028199:30949-30968 Msa1437210:three_prime_UTR 40.0%
AGCAATAGCAGAAGGACTAT+GGG - tig0028199:30950-30969 Msa1437210:three_prime_UTR 40.0%
! TTTCTCCTCGGTTTTCATGA+TGG + tig0028199:30986-31005 Msa1437210:intergenic 40.0%
AAACCGAGGAGAAATAGCAA+AGG - tig0028199:30992-31011 Msa1437210:three_prime_UTR 40.0%
!!! CGAGTTTTGACTTCAACGAT+TGG + tig0028199:31065-31084 Msa1437210:intergenic 40.0%
GGAATGATGAAGAAGGATTG+TGG + tig0028199:31099-31118 Msa1437210:intergenic 40.0%
CGTTATGGGAATGATGAAGA+AGG + tig0028199:31106-31125 Msa1437210:intergenic 40.0%
TGATACTAACACAACGTTCG+AGG + tig0028199:31148-31167 Msa1437210:intergenic 40.0%
AGCTATTCAACCTCAGAAAC+AGG - tig0028199:31329-31348 Msa1437210:three_prime_UTR 40.0%
TATATCGTCGTTGCATGTAG+CGG - tig0028199:31455-31474 Msa1437210:CDS 40.0%
!! ACAAAGTTGGTTTGCTGGTT+AGG - tig0028199:31480-31499 Msa1437210:CDS 40.0%
TAGGATGAGTAGTTAACGAG+TGG - tig0028199:31499-31518 Msa1437210:CDS 40.0%
AGTTAACGAGTGGAGTGATA+AGG - tig0028199:31509-31528 Msa1437210:CDS 40.0%
!! GAAAATGTCAAGGGCTAGTT+TGG - tig0028199:31725-31744 Msa1437210:CDS 40.0%
GGTTAATACAGTTTCAGTCG+TGG - tig0028199:31888-31907 Msa1437210:intron 40.0%
AATATCTCCGTCTTTGAGCA+AGG + tig0028199:32091-32110 Msa1437210:intergenic 40.0%
AATGACCAAAACCGCTATCT+AGG + tig0028199:32155-32174 Msa1437210:intergenic 40.0%
AACAAGATGAAGACCTATCG+GGG + tig0028199:32186-32205 Msa1437210:intergenic 40.0%
CAACAAGATGAAGACCTATC+GGG + tig0028199:32187-32206 Msa1437210:intergenic 40.0%
AAAGCTATTGTCCGCAAATG+AGG + tig0028199:32554-32573 Msa1437210:intergenic 40.0%
!! TTTGCGGACAATAGCTTTGT+AGG - tig0028199:32556-32575 Msa1437210:intron 40.0%
!!! TCTGGTCTAGCTTTTGGAAA+GGG - tig0028199:32673-32692 Msa1437210:intron 40.0%
! AGTTCTTTTAGACTTGGAGG+AGG + tig0028199:32939-32958 Msa1437210:intergenic 40.0%
CTAAGGGTTTAAAGAATGGG+AGG - tig0028199:33008-33027 Msa1437210:intron 40.0%
AGAGAGAGTGAATGTTAGGA+AGG + tig0028199:33100-33119 Msa1437210:intergenic 40.0%
GTTAGTTAACTAGAGAGGCA+GGG + tig0028199:33133-33152 Msa1437210:intergenic 40.0%
AGTTAGTTAACTAGAGAGGC+AGG + tig0028199:33134-33153 Msa1437210:intergenic 40.0%
GCAGACCTCAGTTAAAAGTA+TGG + tig0028199:33164-33183 Msa1437210:intergenic 40.0%
CAGTAGCTGTAGCATGTATA+TGG - tig0028199:33303-33322 Msa1437210:intron 40.0%
TGTCAATTGAAGGAGACTAC+CGG - tig0028199:33856-33875 Msa1437210:intron 40.0%
TCAATATCCGCCTTAGAATG+TGG - tig0028199:33882-33901 Msa1437210:intron 40.0%
ACAGGCATATCCACATTCTA+AGG + tig0028199:33895-33914 Msa1437210:intergenic 40.0%
CATTACTAACCTGCAACTCT+GGG + tig0028199:33935-33954 Msa1437210:intergenic 40.0%
TCATTACTAACCTGCAACTC+TGG + tig0028199:33936-33955 Msa1437210:intergenic 40.0%
AGGAATTACAGACAGTCAGA+TGG + tig0028199:34341-34360 Msa1437210:intergenic 40.0%
ATGAAGTGGCAAAGAACATC+TGG + tig0028199:34381-34400 Msa1437210:intergenic 40.0%
TATCATCATCCCATTGCATG+AGG + tig0028199:34417-34436 Msa1437210:intergenic 40.0%
AGGATTGTGTGGAAGCAAAA+AGG + tig0028199:34625-34644 Msa1437210:intergenic 40.0%
TGCACATATTCTATCGTACG+CGG - tig0028199:34688-34707 Msa1437210:CDS 40.0%
TGATCTTCACTACAGGGAAA+GGG - tig0028199:34845-34864 Msa1437210:intron 40.0%
GAACAGCTGAGAAACATGAA+TGG - tig0028199:34900-34919 Msa1437210:CDS 40.0%
CTGCCATTCCCAAAATATAC+TGG + tig0028199:34957-34976 Msa1437210:intergenic 40.0%
GGTTGGACATAGAGAATATC+TGG + tig0028199:35412-35431 Msa1437210:intergenic 40.0%
CCAACAGAAAAGACATTCCA+CGG + tig0028199:35439-35458 Msa1437210:intergenic 40.0%
GCAGATGAGTTATTGAAGCT+TGG - tig0028199:35682-35701 Msa1437210:intron 40.0%
CACTCTTCTATCTATATGGC+TGG - tig0028199:35835-35854 Msa1437210:intron 40.0%
GTGAAAGAGATAGAGAGAGA+TGG - tig0028199:36197-36216 Msa1437210:intron 40.0%
! GCAGAATAATGGGACAAGAA+AGG - tig0028199:36243-36262 Msa1437210:intron 40.0%
! ATGTGCTGTTCACCAAAGAT+GGG - tig0028199:36392-36411 Msa1437210:CDS 40.0%
ATCTCTCAATTGCCCATCTT+TGG + tig0028199:36407-36426 Msa1437210:intergenic 40.0%
TGAGAGATGATAGAGATGTG+TGG - tig0028199:36419-36438 Msa1437210:CDS 40.0%
GAGAGATGATAGAGATGTGT+GGG - tig0028199:36420-36439 Msa1437210:CDS 40.0%
! AGAGAAGTGCAAGTGATAGA+TGG - tig0028199:36454-36473 Msa1437210:CDS 40.0%
! ATGGCTTCAAAGTGGCATTT+TGG - tig0028199:36627-36646 Msa1437210:intron 40.0%
AAATGACGGTCATGAGAGAA+TGG + tig0028199:36668-36687 Msa1437210:intergenic 40.0%
CCACCCTCATTCTTAAATGA+CGG + tig0028199:36682-36701 Msa1437210:intergenic 40.0%
CGTCATTTAAGAATGAGGGT+GGG - tig0028199:36680-36699 Msa1437210:intron 40.0%
! GCATTCTGTGCAAGTTTTCA+GGG - tig0028199:36877-36896 Msa1437210:intron 40.0%
TGGCATTCTGTGCAAATTTC+AGG - tig0028199:36993-37012 Msa1437210:intron 40.0%
TCTGTGCAAATTTCAGGCTT+TGG - tig0028199:36999-37018 Msa1437210:intron 40.0%
TGCATCATTGAGATGCTAAG+AGG - tig0028199:37075-37094 Msa1437210:intron 40.0%
AGCCAACAGAATGAGCATAT+TGG + tig0028199:37101-37120 Msa1437210:intergenic 40.0%
!!! CTTACTTTTTCTAACGCAGG+TGG - tig0028199:37491-37510 Msa1437210:CDS 40.0%
! TGCAGGCACTTGATTTGATT+GGG - tig0028199:37559-37578 Msa1437210:CDS 40.0%
TGGGCCAGTTTATGAAGTAA+TGG - tig0028199:37578-37597 Msa1437210:CDS 40.0%
ACTGGTGTTCTCTTTGCTTA+CGG - tig0028199:37627-37646 Msa1437210:CDS 40.0%
! CCAGTTCAATAGTTTTCTGG+TGG + tig0028199:38256-38275 Msa1437210:intergenic 40.0%
CCACCAGAAAACTATTGAAC+TGG - tig0028199:38253-38272 Msa1437210:intron 40.0%
GCCCAGTCAAATACTAAATC+TGG - tig0028199:38332-38351 Msa1437210:intron 40.0%
!! GCACTTGTTGTTTGGTGAAA+TGG + tig0028199:38406-38425 Msa1437210:intergenic 40.0%
ATGCACTGTATAGCACGTTA+GGG + tig0028199:38443-38462 Msa1437210:intergenic 40.0%
GAGAGTCAATAGTTAGACTG+GGG + tig0028199:38594-38613 Msa1437210:intergenic 40.0%
CGAGAGTCAATAGTTAGACT+GGG + tig0028199:38595-38614 Msa1437210:intergenic 40.0%
TCGAGAGTCAATAGTTAGAC+TGG + tig0028199:38596-38615 Msa1437210:intergenic 40.0%
AAATGCAACTTGGAGGAAAG+AGG + tig0028199:38712-38731 Msa1437210:intergenic 40.0%
TTGTAGAATTCGTTTGGCGA+AGG - tig0028199:38739-38758 Msa1437210:intron 40.0%
TGTAGAATTCGTTTGGCGAA+GGG - tig0028199:38740-38759 Msa1437210:intron 40.0%
TTTAACAACCCTTGGCAGTT+TGG - tig0028199:38814-38833 Msa1437210:intron 40.0%
TACAGTGTCACGCAATACAA+TGG + tig0028199:38840-38859 Msa1437210:intergenic 40.0%
! TTTGAGATCGTCTTTGACCT+TGG - tig0028199:38874-38893 Msa1437210:intron 40.0%
ATCACAAAGCTTCTTTGCCA+AGG + tig0028199:38894-38913 Msa1437210:intergenic 40.0%
TGATGTTCCTTCTCAAGTCT+GGG - tig0028199:38910-38929 Msa1437210:intron 40.0%
! TCTTGCAGTTTTCTCTGTTC+TGG - tig0028199:39091-39110 Msa1437210:intron 40.0%
!!! TTTTCTCTGTTCTGGTTTGC+TGG - tig0028199:39099-39118 Msa1437210:intron 40.0%
TTTCCTGAATCAAGGGACTA+GGG + tig0028199:39286-39305 Msa1437210:intergenic 40.0%
ATTTCCTGAATCAAGGGACT+AGG + tig0028199:39287-39306 Msa1437210:intergenic 40.0%
CGTGTAGATTTCCTGAATCA+AGG + tig0028199:39294-39313 Msa1437210:intergenic 40.0%
AAAGGATTATCCTACGAGTG+GGG + tig0028199:39383-39402 Msa1437210:intergenic 40.0%
! ATAGTTTAAAACAGGGGGAG+GGG + tig0028199:39413-39432 Msa1437210:intergenic 40.0%
!! CAGAGATTAACGAGGTATTG+AGG + tig0028199:39481-39500 Msa1437210:intergenic 40.0%
AAATGAGCACAAGGAGAGAA+AGG + tig0028199:39541-39560 Msa1437210:intergenic 40.0%
CAAGGTTAGAAATGAGCACA+AGG + tig0028199:39550-39569 Msa1437210:intergenic 40.0%
GCTAATCTTATCAAGGAAGC+AGG - tig0028199:39569-39588 Msa1437210:intron 40.0%
GATGAAACCCTGACTTTGAA+GGG + tig0028199:39597-39616 Msa1437210:intergenic 40.0%
TGATGAAACCCTGACTTTGA+AGG + tig0028199:39598-39617 Msa1437210:intergenic 40.0%
TACAGGACTAACTCGGTAAT+TGG - tig0028199:40398-40417 Msa1437210:intron 40.0%
ACACATTAGCTGTCAGATAG+TGG - tig0028199:40424-40443 Msa1437210:intron 40.0%
AATCTGAAGACCTGCATAAG+AGG - tig0028199:40611-40630 Msa1437210:intron 40.0%
!! ACTAGCATTGATGATGGAAC+GGG + tig0028199:40894-40913 Msa1437210:intergenic 40.0%
ATACCGGATTAACTTCCATG+AGG + tig0028199:40969-40988 Msa1437210:intergenic 40.0%
GTTGAAGAGTTTCACCAGAA+AGG - tig0028199:41037-41056 Msa1437210:CDS 40.0%
AGGTAAGATGGAAACCTTTC+TGG + tig0028199:41054-41073 Msa1437210:intergenic 40.0%
AAGGTTTCCATCTTACCTCA+AGG - tig0028199:41056-41075 Msa1437210:intron 40.0%
CTAGGACAGGAAAAGGATAT+AGG + tig0028199:41454-41473 Msa1437210:intergenic 40.0%
CAGTAAACTAGGACAGGAAA+AGG + tig0028199:41461-41480 Msa1437210:intergenic 40.0%
! GTAATGGAGTCAATGGGGAA+GGG + tig0028199:30852-30871 Msa0967290:intergenic 45.0%
GCAATAGCAGAAGGACTATG+GGG - tig0028199:30951-30970 Msa1437210:three_prime_UTR 45.0%
!! CTGCCTTTGCTATTTCTCCT+CGG + tig0028199:30998-31017 Msa1437210:intergenic 45.0%
CGATTGGGAAGAAGGAAACT+TGG + tig0028199:31049-31068 Msa1437210:intergenic 45.0%
GACTTCAACGATTGGGAAGA+AGG + tig0028199:31057-31076 Msa1437210:intergenic 45.0%
!! GCATGTAGCGGATACAAAGT+TGG - tig0028199:31467-31486 Msa1437210:CDS 45.0%
!! CGGATACAAAGTTGGTTTGC+TGG - tig0028199:31475-31494 Msa1437210:CDS 45.0%
AGGAAGTCGAGTGTTAGATC+TGG - tig0028199:31529-31548 Msa1437210:CDS 45.0%
TTAACATTATGCTGGGCGTG+AGG + tig0028199:31557-31576 Msa1437210:intergenic 45.0%
ACTGAAGGCAAATTAGTCCC+CGG - tig0028199:31666-31685 Msa1437210:CDS 45.0%
TCCCTCTGTTATAATGAGCC+GGG + tig0028199:31687-31706 Msa1437210:intergenic 45.0%
GTCCCTCTGTTATAATGAGC+CGG + tig0028199:31688-31707 Msa1437210:intergenic 45.0%
! GGTCCCTGACAATTTTCTCA+CGG + tig0028199:31780-31799 Msa1437210:intergenic 45.0%
!!! AGCATGTCTGGTCTAGCTTT+TGG - tig0028199:32667-32686 Msa1437210:intron 45.0%
!!! GTCTGGTCTAGCTTTTGGAA+AGG - tig0028199:32672-32691 Msa1437210:intron 45.0%
!!! CTGGTCTAGCTTTTGGAAAG+GGG - tig0028199:32674-32693 Msa1437210:intron 45.0%
!! GCTTTTGGAAAGGGGTCAAA+CGG - tig0028199:32682-32701 Msa1437210:intron 45.0%
!! CTTTTGGAAAGGGGTCAAAC+GGG - tig0028199:32683-32702 Msa1437210:intron 45.0%
ACCCTTAGCTCAAACCAGTT+GGG + tig0028199:32996-33015 Msa1437210:intergenic 45.0%
AACCCTTAGCTCAAACCAGT+TGG + tig0028199:32997-33016 Msa1437210:intergenic 45.0%
CTTCACCAGAGTTTGAACTC+AGG + tig0028199:33035-33054 Msa1437210:intergenic 45.0%
CTGAGTTCAAACTCTGGTGA+AGG - tig0028199:33033-33052 Msa1437210:intron 45.0%
GCAGAGAGAGAGTGAATGTT+AGG + tig0028199:33104-33123 Msa1437210:intergenic 45.0%
GTCAATTGAAGGAGACTACC+GGG - tig0028199:33857-33876 Msa1437210:intron 45.0%
TCAATTGAAGGAGACTACCG+GGG - tig0028199:33858-33877 Msa1437210:intron 45.0%
! GGCATATCCACATTCTAAGG+CGG + tig0028199:33892-33911 Msa1437210:intergenic 45.0%
GTAGCATACTTCAGTAGCAC+AGG + tig0028199:33913-33932 Msa1437210:intergenic 45.0%
AAGAGCAAAGAAGGGAGCAA+AGG + tig0028199:33981-34000 Msa1437210:intergenic 45.0%
CGGATGCAAAGAGCAAAGAA+GGG + tig0028199:33989-34008 Msa1437210:intergenic 45.0%
TCGGATGCAAAGAGCAAAGA+AGG + tig0028199:33990-34009 Msa1437210:intergenic 45.0%
GTGGGCATGCAATAATGAAG+TGG + tig0028199:34395-34414 Msa1437210:intergenic 45.0%
ATCATCCCATTGCATGAGGT+GGG + tig0028199:34413-34432 Msa1437210:intergenic 45.0%
GCAAACATGCACATGTCTGT+GGG + tig0028199:34555-34574 Msa1437210:intergenic 45.0%
TGCAAACATGCACATGTCTG+TGG + tig0028199:34556-34575 Msa1437210:intergenic 45.0%
! TGTTGTCTCTGAGGATTGTG+TGG + tig0028199:34636-34655 Msa1437210:intergenic 45.0%
GCACATATTCTATCGTACGC+GGG - tig0028199:34689-34708 Msa1437210:CDS 45.0%
AGCATCCAGATTGTCCACAT+GGG + tig0028199:34739-34758 Msa1437210:intergenic 45.0%
ACACATGCAAGAGCTAGTGA+AGG - tig0028199:34788-34807 Msa1437210:intron 45.0%
CAGGTCTGATCTTCACTACA+GGG - tig0028199:34839-34858 Msa1437210:intron 45.0%
CTGATCTTCACTACAGGGAA+AGG - tig0028199:34844-34863 Msa1437210:intron 45.0%
ATGGGTTCAGTTCAATTGGG+AGG - tig0028199:34919-34938 Msa1437210:CDS 45.0%
TGGGTTCAGTTCAATTGGGA+GGG - tig0028199:34920-34939 Msa1437210:CDS 45.0%
TTAGCACCACCTCCTATTGA+TGG - tig0028199:35002-35021 Msa1437210:intron 45.0%
TAGCACCACCTCCTATTGAT+GGG - tig0028199:35003-35022 Msa1437210:intron 45.0%
! GCGCCCAAAAGGACTTTTTA+AGG - tig0028199:35085-35104 Msa1437210:intron 45.0%
TCGGGGATGCGTATAATTCA+AGG - tig0028199:35128-35147 Msa1437210:intron 45.0%
TGGCAAGTAGTGACGATGAT+AGG + tig0028199:35392-35411 Msa1437210:intergenic 45.0%
! CCGTGGAATGTCTTTTCTGT+TGG - tig0028199:35436-35455 Msa1437210:intron 45.0%
! ATTGCTGTTGTGCATTGCTG+TGG - tig0028199:35599-35618 Msa1437210:intron 45.0%
CTAAAGCGGCAAGAATTGCT+CGG + tig0028199:35628-35647 Msa1437210:intergenic 45.0%
! GGAATTACTGATGGTGTCAG+AGG - tig0028199:35703-35722 Msa1437210:intron 45.0%
ATGGGACAAGAAAGGAATGG+TGG - tig0028199:36251-36270 Msa1437210:intron 45.0%
ATTGGCGATAGTTTACGCAC+TGG - tig0028199:36367-36386 Msa1437210:intron 45.0%
! GATGTGCTGTTCACCAAAGA+TGG - tig0028199:36391-36410 Msa1437210:CDS 45.0%
!!! TGATGCTTTTTCTGCCGTCA+TGG - tig0028199:36571-36590 Msa1437210:intron 45.0%
ATGTAAAAGCCACCCCAACA+TGG - tig0028199:36608-36627 Msa1437210:CDS 45.0%
!! TGCCACTTTGAAGCCATGTT+GGG + tig0028199:36624-36643 Msa1437210:intergenic 45.0%
!! ATGCCACTTTGAAGCCATGT+TGG + tig0028199:36625-36644 Msa1437210:intergenic 45.0%
CCGTCATTTAAGAATGAGGG+TGG - tig0028199:36679-36698 Msa1437210:intron 45.0%
AAGCAAGCCACCTAATAAGG+TGG + tig0028199:36765-36784 Msa1437210:intergenic 45.0%
CAGAAGCAAGCCACCTAATA+AGG + tig0028199:36768-36787 Msa1437210:intergenic 45.0%
!! CTTATTAGGTGGCTTGCTTC+TGG - tig0028199:36766-36785 Msa1437210:intron 45.0%
! GGCATTCTGTGCAAGTTTTC+AGG - tig0028199:36876-36895 Msa1437210:intron 45.0%
GGCCAATATGCTCATTCTGT+TGG - tig0028199:37096-37115 Msa1437210:intron 45.0%
! CCTGCAGGCAAACTATGTTT+TGG + tig0028199:37545-37564 Msa1437210:intergenic 45.0%
! CCAAAACATAGTTTGCCTGC+AGG - tig0028199:37542-37561 Msa1437210:CDS 45.0%
CAATCAAATCAAGTGCCTGC+AGG + tig0028199:37560-37579 Msa1437210:intergenic 45.0%
! CTGCAGGCACTTGATTTGAT+TGG - tig0028199:37558-37577 Msa1437210:CDS 45.0%
GTAGGGGTTAGAGAGAAAAC+TGG - tig0028199:37609-37628 Msa1437210:CDS 45.0%
! TTCGATCAGGCTTTTCTGTC+TGG - tig0028199:37717-37736 Msa1437210:intron 45.0%
! TCGATCAGGCTTTTCTGTCT+GGG - tig0028199:37718-37737 Msa1437210:intron 45.0%
! GCCGGTTTAAATGATTTGGC+TGG + tig0028199:38365-38384 Msa1437210:intergenic 45.0%
CACGTTAGGGGCAAACAAAT+TGG + tig0028199:38430-38449 Msa1437210:intergenic 45.0%
TGCACTGTATAGCACGTTAG+GGG + tig0028199:38442-38461 Msa1437210:intergenic 45.0%
CATGCACTGTATAGCACGTT+AGG + tig0028199:38444-38463 Msa1437210:intergenic 45.0%
TACAATGGCCAAACTGCCAA+GGG + tig0028199:38825-38844 Msa1437210:intergenic 45.0%
ATACAATGGCCAAACTGCCA+AGG + tig0028199:38826-38845 Msa1437210:intergenic 45.0%
AGACGATCTCAAAATCTCCC+TGG + tig0028199:38867-38886 Msa1437210:intergenic 45.0%
GTGATGTTCCTTCTCAAGTC+TGG - tig0028199:38909-38928 Msa1437210:intron 45.0%
GCAAGAAATGAAAGACACGG+TGG + tig0028199:39077-39096 Msa1437210:intergenic 45.0%
TTCCTGAATCAAGGGACTAG+GGG + tig0028199:39285-39304 Msa1437210:intergenic 45.0%
! ACATAGTTTTCCCCACTCGT+AGG - tig0028199:39370-39389 Msa1437210:intron 45.0%
ACAAGGAGAGAAAGGAACTG+GGG + tig0028199:39533-39552 Msa1437210:intergenic 45.0%
CACAAGGAGAGAAAGGAACT+GGG + tig0028199:39534-39553 Msa1437210:intergenic 45.0%
CATTAACTTCAGTGTCGCCA+TGG - tig0028199:40241-40260 Msa1437210:intron 45.0%
GCAACTTTGATAGACGAGCA+GGG - tig0028199:40446-40465 Msa1437210:intron 45.0%
GTGGTAGAAGACGTGGAAAA+CGG - tig0028199:40928-40947 Msa1437210:CDS 45.0%
ATACTTGACAGACAGCCTTG+AGG + tig0028199:41074-41093 Msa1437210:intergenic 45.0%
GGATAGCTGATAGAACTCAC+TGG - tig0028199:41155-41174 Msa1437210:intron 45.0%
GCATTGCAGTAAACTAGGAC+AGG + tig0028199:41467-41486 Msa1437210:intergenic 45.0%
!!! ATTTTTTGTTAATTATATTT+TGG - tig0028199:40722-40741 Msa1437210:intron 5.0%
!! GGTAATGGAGTCAATGGGGA+AGG + tig0028199:30853-30872 Msa0967290:intergenic 50.0%
GCAGACCATCATGAAAACCG+AGG - tig0028199:30978-30997 Msa1437210:three_prime_UTR 50.0%
! CTTGATCTTGCTGCTTCTGC+TGG - tig0028199:31366-31385 Msa1437210:CDS 50.0%
! CTTGCTGCTTCTGCTGGAAA+TGG - tig0028199:31372-31391 Msa1437210:CDS 50.0%
TCCCCGGCTCATTATAACAG+AGG - tig0028199:31682-31701 Msa1437210:CDS 50.0%
CCCTCTGTTATAATGAGCCG+GGG + tig0028199:31686-31705 Msa1437210:intergenic 50.0%
CCCCGGCTCATTATAACAGA+GGG - tig0028199:31683-31702 Msa1437210:CDS 50.0%
TGGGCCGTGAGAAAATTGTC+AGG - tig0028199:31773-31792 Msa1437210:intron 50.0%
GGGCCGTGAGAAAATTGTCA+GGG - tig0028199:31774-31793 Msa1437210:intron 50.0%
AGTATTGCGGTTGCAACCAC+AGG - tig0028199:32450-32469 Msa1437210:intron 50.0%
!! AGCCCAACTGGTTTGAGCTA+AGG - tig0028199:32991-33010 Msa1437210:intron 50.0%
!! GCCCAACTGGTTTGAGCTAA+GGG - tig0028199:32992-33011 Msa1437210:intron 50.0%
GAGGACCTGAGTTCAAACTC+TGG - tig0028199:33027-33046 Msa1437210:intron 50.0%
GTTAACTAGAGAGGCAGGGA+GGG + tig0028199:33129-33148 Msa1437210:intergenic 50.0%
AGTTAACTAGAGAGGCAGGG+AGG + tig0028199:33130-33149 Msa1437210:intergenic 50.0%
CTAAGGCGGATATTGAACCC+CGG + tig0028199:33878-33897 Msa1437210:intergenic 50.0%
AGTATGCTACCCAGAGTTGC+AGG - tig0028199:33923-33942 Msa1437210:intron 50.0%
CATCATCCCATTGCATGAGG+TGG + tig0028199:34414-34433 Msa1437210:intergenic 50.0%
GCATCCAGATTGTCCACATG+GGG + tig0028199:34738-34757 Msa1437210:intergenic 50.0%
CAGCATCCAGATTGTCCACA+TGG + tig0028199:34740-34759 Msa1437210:intergenic 50.0%
ACAATCTGGATGCTGCTGTG+AGG - tig0028199:34745-34764 Msa1437210:intron 50.0%
CAATCTGGATGCTGCTGTGA+GGG - tig0028199:34746-34765 Msa1437210:intron 50.0%
CCTGTAGTGAAGATCAGACC+TGG + tig0028199:34841-34860 Msa1437210:intergenic 50.0%
CCAGGTCTGATCTTCACTAC+AGG - tig0028199:34838-34857 Msa1437210:intron 50.0%
AGCACCACCTCCTATTGATG+GGG - tig0028199:35004-35023 Msa1437210:intron 50.0%
CATTCCCCATCAATAGGAGG+TGG + tig0028199:35011-35030 Msa1437210:intergenic 50.0%
CACCTCCTATTGATGGGGAA+TGG - tig0028199:35009-35028 Msa1437210:intron 50.0%
AGCCATTCCCCATCAATAGG+AGG + tig0028199:35014-35033 Msa1437210:intergenic 50.0%
GGAAGCCATTCCCCATCAAT+AGG + tig0028199:35017-35036 Msa1437210:intergenic 50.0%
GTTGTATTTGGGCGCCCAAA+AGG - tig0028199:35074-35093 Msa1437210:intron 50.0%
! GTGTGGAAAGCGCATACAGT+CGG - tig0028199:35109-35128 Msa1437210:intron 50.0%
! TGTGGAAAGCGCATACAGTC+GGG - tig0028199:35110-35129 Msa1437210:intron 50.0%
GAAAAGACATTCCACGGCTG+TGG + tig0028199:35433-35452 Msa1437210:intergenic 50.0%
TTCTGCTCGTGTGAGCTCTA+AGG + tig0028199:35905-35924 Msa1437210:intergenic 50.0%
GATAGAGATGTGTGGGTGAG+AGG - tig0028199:36427-36446 Msa1437210:CDS 50.0%
!! ACTTTGAAGCCATGTTGGGG+TGG + tig0028199:36620-36639 Msa1437210:intergenic 50.0%
ACCCCAACATGGCTTCAAAG+TGG - tig0028199:36619-36638 Msa1437210:intron 50.0%
!! GCCACTTTGAAGCCATGTTG+GGG + tig0028199:36623-36642 Msa1437210:intergenic 50.0%
CGTGTCTGAGTGAAGAAGAC+TGG - tig0028199:38162-38181 Msa1437210:intron 50.0%
TCTGGTGGAACTAGACAGTC+TGG + tig0028199:38241-38260 Msa1437210:intergenic 50.0%
!!! TGGGTGCTGACTGTTTTGAC+AGG - tig0028199:38929-38948 Msa1437210:intron 50.0%
AAGGAGAGAAAGGAACTGGG+GGG + tig0028199:39531-39550 Msa1437210:intergenic 50.0%
CAAGGAGAGAAAGGAACTGG+GGG + tig0028199:39532-39551 Msa1437210:intergenic 50.0%
GCACAAGGAGAGAAAGGAAC+TGG + tig0028199:39535-39554 Msa1437210:intergenic 50.0%
AGCAGGTTCCCTTCAAAGTC+AGG - tig0028199:39586-39605 Msa1437210:intron 50.0%
GCAGGTTCCCTTCAAAGTCA+GGG - tig0028199:39587-39606 Msa1437210:intron 50.0%
AGTGAGGAGTTTGACAGCCA+TGG + tig0028199:39975-39994 Msa1437210:intergenic 50.0%
GGCAACTTTGATAGACGAGC+AGG - tig0028199:40445-40464 Msa1437210:intron 50.0%
CTTTGATAGACGAGCAGGGA+TGG - tig0028199:40450-40469 Msa1437210:intron 50.0%
TGAAGACCTGCATAAGAGGC+TGG - tig0028199:40615-40634 Msa1437210:intron 50.0%
!! GATGGTAGTGGTAGAAGACG+TGG - tig0028199:40921-40940 Msa1437210:CDS 50.0%
!! GATTGCTCTAAGGTGCAAGC+AGG - tig0028199:41015-41034 Msa1437210:CDS 50.0%
CAGACAGCCTTGAGGTAAGA+TGG + tig0028199:41066-41085 Msa1437210:intergenic 50.0%
TTATGCCGCGGCCTAGATAG+CGG - tig0028199:32141-32160 Msa1437210:intron 55.0%
CAAAACCGCTATCTAGGCCG+CGG + tig0028199:32149-32168 Msa1437210:intergenic 55.0%
TGAGAGATGGGTAGCCCAAC+TGG - tig0028199:32979-32998 Msa1437210:intron 55.0%
TGCATGCCCACCTCATGCAA+TGG - tig0028199:34404-34423 Msa1437210:intron 55.0%
GCATGCCCACCTCATGCAAT+GGG - tig0028199:34405-34424 Msa1437210:intron 55.0%
!! CCAGGGCATTGTTGTCTCTG+AGG + tig0028199:34645-34664 Msa1437210:intergenic 55.0%
CCTCAGAGACAACAATGCCC+TGG - tig0028199:34642-34661 Msa1437210:CDS 55.0%
CAAGAATGCTGCACCCCATG+TGG - tig0028199:34722-34741 Msa1437210:CDS 55.0%
TGCACCCCATGTGGACAATC+TGG - tig0028199:34731-34750 Msa1437210:intron 55.0%
CTGCTGTGAGGGCTGAAAAG+AGG - tig0028199:34757-34776 Msa1437210:intron 55.0%
GGGAATGGCAGAAGGACACT+AGG - tig0028199:34966-34985 Msa1437210:intron 55.0%
! GTGGAAAGCGCATACAGTCG+GGG - tig0028199:35111-35130 Msa1437210:intron 55.0%
TCTATGTCCAACCACAGCCG+TGG - tig0028199:35419-35438 Msa1437210:intron 55.0%
AGACATTCCACGGCTGTGGT+TGG + tig0028199:35429-35448 Msa1437210:intergenic 55.0%
AGAATACGCTGAAGCGCAGC+AGG - tig0028199:35921-35940 Msa1437210:intron 55.0%
TCTAACGCAGGTGGATCCCA+TGG - tig0028199:37500-37519 Msa1437210:CDS 55.0%
CTAACGCAGGTGGATCCCAT+GGG - tig0028199:37501-37520 Msa1437210:CDS 55.0%
TGCGTGACACTGTACAAGCC+AGG - tig0028199:38846-38865 Msa1437210:intron 55.0%
GCGTGACACTGTACAAGCCA+GGG - tig0028199:38847-38866 Msa1437210:intron 55.0%
GTCAGCACCCAGACTTGAGA+AGG + tig0028199:38920-38939 Msa1437210:intergenic 55.0%
CTCCCCTAGTCCCTTGATTC+AGG - tig0028199:39280-39299 Msa1437210:intron 55.0%
AGGGGGAGGGGTTACCAAAA+AGG + tig0028199:39401-39420 Msa1437210:intergenic 55.0%
GATAGACGAGCAGGGATGGA+TGG - tig0028199:40454-40473 Msa1437210:intron 55.0%
CATCAGCCAGCCTCTTATGC+AGG + tig0028199:40624-40643 Msa1437210:intergenic 55.0%
TGCAATGGCAGGACCAAGCA+TGG - tig0028199:40818-40837 Msa1437210:intron 55.0%
GCAATGGCAGGACCAAGCAT+GGG - tig0028199:40819-40838 Msa1437210:intron 55.0%
GCTGGCAGGCCAATAGATTC+TGG + tig0028199:40864-40883 Msa1437210:intergenic 55.0%
!! CGCGGCCTAGATAGCGGTTT+TGG - tig0028199:32147-32166 Msa1437210:intron 60.0%
AACTAGAGAGGCAGGGAGGG+AGG + tig0028199:33126-33145 Msa1437210:intergenic 60.0%
TACGCTGAAGCGCAGCAGGT+TGG - tig0028199:35925-35944 Msa1437210:intron 60.0%
GATGGAACGGGTGCTTGTGC+TGG + tig0028199:40882-40901 Msa1437210:intergenic 60.0%
! GAACGGGTGCTTGTGCTGGC+AGG + tig0028199:40878-40897 Msa1437210:intergenic 65.0%
Chromosome Type Strat End Strand Name
tig0028199 gene 30812 41501 30812 ID=Msa1437210;Name=Msa1437210
tig0028199 mRNA 30812 41501 30812 ID=Msa1437210-mRNA-1;Parent=Msa1437210;Name=Msa1437210-mRNA-1;_AED=0.08;_eAED=0.08;_QI=133|1|1|1|0.91|1|13|542|727
tig0028199 exon 30812 31548 30812 ID=Msa1437210-mRNA-1:exon:10535;Parent=Msa1437210-mRNA-1
tig0028199 exon 31641 31765 31641 ID=Msa1437210-mRNA-1:exon:10534;Parent=Msa1437210-mRNA-1
tig0028199 exon 33363 33568 33363 ID=Msa1437210-mRNA-1:exon:10533;Parent=Msa1437210-mRNA-1
tig0028199 exon 34625 34749 34625 ID=Msa1437210-mRNA-1:exon:10532;Parent=Msa1437210-mRNA-1
tig0028199 exon 34855 34944 34855 ID=Msa1437210-mRNA-1:exon:10531;Parent=Msa1437210-mRNA-1
tig0028199 exon 35152 35298 35152 ID=Msa1437210-mRNA-1:exon:10530;Parent=Msa1437210-mRNA-1
tig0028199 exon 36371 36492 36371 ID=Msa1437210-mRNA-1:exon:10529;Parent=Msa1437210-mRNA-1
tig0028199 exon 36589 36627 36589 ID=Msa1437210-mRNA-1:exon:10528;Parent=Msa1437210-mRNA-1
tig0028199 exon 37164 37665 37164 ID=Msa1437210-mRNA-1:exon:10527;Parent=Msa1437210-mRNA-1
tig0028199 exon 37815 37931 37815 ID=Msa1437210-mRNA-1:exon:10526;Parent=Msa1437210-mRNA-1
tig0028199 exon 38369 38510 38369 ID=Msa1437210-mRNA-1:exon:10525;Parent=Msa1437210-mRNA-1
tig0028199 exon 40910 41070 40910 ID=Msa1437210-mRNA-1:exon:10524;Parent=Msa1437210-mRNA-1
tig0028199 exon 41156 41501 41156 ID=Msa1437210-mRNA-1:exon:10523;Parent=Msa1437210-mRNA-1
tig0028199 five_prime_UTR 41369 41501 41369 ID=Msa1437210-mRNA-1:five_prime_utr;Parent=Msa1437210-mRNA-1
tig0028199 CDS 41156 41368 41156 ID=Msa1437210-mRNA-1:cds;Parent=Msa1437210-mRNA-1
tig0028199 CDS 40910 41070 40910 ID=Msa1437210-mRNA-1:cds;Parent=Msa1437210-mRNA-1
tig0028199 CDS 38369 38510 38369 ID=Msa1437210-mRNA-1:cds;Parent=Msa1437210-mRNA-1
tig0028199 CDS 37815 37931 37815 ID=Msa1437210-mRNA-1:cds;Parent=Msa1437210-mRNA-1
tig0028199 CDS 37164 37665 37164 ID=Msa1437210-mRNA-1:cds;Parent=Msa1437210-mRNA-1
tig0028199 CDS 36589 36627 36589 ID=Msa1437210-mRNA-1:cds;Parent=Msa1437210-mRNA-1
tig0028199 CDS 36371 36492 36371 ID=Msa1437210-mRNA-1:cds;Parent=Msa1437210-mRNA-1
tig0028199 CDS 35152 35298 35152 ID=Msa1437210-mRNA-1:cds;Parent=Msa1437210-mRNA-1
tig0028199 CDS 34855 34944 34855 ID=Msa1437210-mRNA-1:cds;Parent=Msa1437210-mRNA-1
tig0028199 CDS 34625 34749 34625 ID=Msa1437210-mRNA-1:cds;Parent=Msa1437210-mRNA-1
tig0028199 CDS 33363 33568 33363 ID=Msa1437210-mRNA-1:cds;Parent=Msa1437210-mRNA-1
tig0028199 CDS 31641 31765 31641 ID=Msa1437210-mRNA-1:cds;Parent=Msa1437210-mRNA-1
tig0028199 CDS 31354 31548 31354 ID=Msa1437210-mRNA-1:cds;Parent=Msa1437210-mRNA-1
tig0028199 three_prime_UTR 30812 31353 30812 ID=Msa1437210-mRNA-1:three_prime_utr;Parent=Msa1437210-mRNA-1
Gene Sequence

>Msa1437210

ATGGAAGCAATAGCAGAAGGACTATGGGGATTAGCAGACCATCATGAAAACCGAGGAGAAATAGCAAAGGCAGTAAAATGTCTAGAAGCAATCTGTCAAAGCCAAGTTTCCTTCTTCCCAATCGTTGAAGTCAAAACTCGTCTTCGTATCGCCACAATCCTTCTTCATCATTCCCATAACGCTAATCACGCTAAATCTCACCTCGAACGTTGTCAATTGTTGTTGAAGGCTATACCATCTTGTTTTGAGTTGAAGTGTAGAGCTTACAGTTTGTTGAGTCAGTGTTATCATCTTGTTGGAGCTATTCAACCTCAGAAACAGGTTTTGTTTAAGGGTCTTGATCTTGCTGCTTCTGCTGGAAATGGAAATAATGAGATTTCAACAAAGTTGTGGTCTTGCAACTTCAACTCACAGCTTGCAAATGCTTTGTCAATTGAAGGAGACTACCGGGGTTCAATATCCGCCTTAGAATGTGGATATGCCTGTGCTACTGAAGTATGCTACCCAGAGTTGCAGATGTTCTTTGCCACTTCATTATTGCATGCCCACCTCATGCAATGGGATGATGATAATTTGGTTGAGCAAGCTGTTAATAAATGCAATGAGATTTGGGAGTCAATTCAGCCAGATAAAAGACAACAATGCCCTGGCTTGCTCTTTTATAATGAATTACTGCACATATTCTATCGTACGCGGGTATGTGATTACAAGAATGCTGCACCCCATGTGGACAATCTGGATGCTGCTGTGAGGGCTGAAAAGAGGCAAACACAACACATGCAAGAGCTAGTGAAGGAGCTCAGTGTCTTAGATCAAAGTCTTTCCAGGTCTGATCTTCACTACAGGGAAAGGGCAGCGTTGTCTGAAAAGCAAGCAATGATTCAAGAACAGCTGAGAAACATGAATGGGTTCAGTTCAATTGGGAGGGACTCTCTTGAACCAGTATATTTTGGGAATGGCAGAAGGACACTAGGAGATAAGCTTCAGTTAGCACCACCTCCTATTGATGGGGAATGGCTTCCTAAAAGTGCTATCTATGCACTAGTTGATCTGATAACTGTTGTATTTGGGCGCCCAAAAGGACTTTTTAAGGAGTGTGGAAAGCGCATACAGTCGGGGATGCGTATAATTCAAGATGAGTTATTGAAGCTTGGAATTACTGATGGTGTCAGAGAAGTGGACTTGCAACACTCTTCTATCTATATGGCTGGAGTATACTTAATGCTACTAATTCAGTTTCTTGAAAACAAAGTGGCCTTAGAGCTCACACGAGCAGAATACGCTGAAGCGCAGCAGGCTTTGGTTCAGATGAAAAATTGGTTCATGCGGTTTCCGACTATATTACAGCCATGTGAATGCATCATTGAGATGCTAAGAGGCCAATATGCTCATTCTGTTGGCTGTTATAATGAAGCCGTCTTTCATTATATTGAAGCAGTAAAGCTCACGGACAGCAAATCAATGCAAGCTATGTGCCAAGTTTATGCAGCTGTTTCTTATATCTGCATTGGTGATGCTGAATCTAATTCACAGGCACTTGATTTGATTGGGCCAGTTTATGAAGTAATGGATTCTTTTGTAGGGGTTAGAGAGAAAACTGGTGTTCTCTTTGCTTACGGACTTTTATTGATGAAGCAACAAGATCTACAAGAAGCAAGAATTCGTTTGGCGAAGGGATTGCAGTTGACACATACTTATTTGGGGAACCTTCAACTTATTTCCCAATATTTAACAACCCTTGGCAGTTTGGCCATTGTATTGCGTGACACTGTACAAGCCAGGGAGATTTTGAGATCGTCTTTGACCTTGGCAAAGAAGCTTTGTGATGTTCCTTCTCAAGTCTGGGTGCTGACTGTTTTGACAGCTTTATATAAAGAATTAGGAGAAAGAGGAAATGAATTGGACAATGCTGATTATCAGACAAAAAAATCTGAAGACCTGCATAAGAGGCTGGCTGATGCACAAGCGTCCATTTATCATATTGAAATAATTGAGAGAGTAAGATTTGAAGTTCCACAATTACATGAGTTGGAAATCAGGCGTGCAATGGCAGGACCAAGCATGGGAGTTAATAATCTTGATATTCCAGAATCTATTGGCCTGCCAGCACAAGCACCCGTTCCATCATCAATGCTAGTTGATATAGATGGTAGTGGTAGAAGACGTGGAAAACGGAGAATTTAG

Protein sequence

>Msa1437210

MEAIAEGLWGLADHHENRGEIAKAVKCLEAICQSQVSFFPIVEVKTRLRIATILLHHSHNANHAKSHLERCQLLLKAIPSCFELKCRAYSLLSQCYHLVGAIQPQKQVLFKGLDLAASAGNGNNEISTKLWSCNFNSQLANALSIEGDYRGSISALECGYACATEVCYPELQMFFATSLLHAHLMQWDDDNLVEQAVNKCNEIWESIQPDKRQQCPGLLFYNELLHIFYRTRVCDYKNAAPHVDNLDAAVRAEKRQTQHMQELVKELSVLDQSLSRSDLHYRERAALSEKQAMIQEQLRNMNGFSSIGRDSLEPVYFGNGRRTLGDKLQLAPPPIDGEWLPKSAIYALVDLITVVFGRPKGLFKECGKRIQSGMRIIQDELLKLGITDGVREVDLQHSSIYMAGVYLMLLIQFLENKVALELTRAEYAEAQQALVQMKNWFMRFPTILQPCECIIEMLRGQYAHSVGCYNEAVFHYIEAVKLTDSKSMQAMCQVYAAVSYICIGDAESNSQALDLIGPVYEVMDSFVGVREKTGVLFAYGLLLMKQQDLQEARIRLAKGLQLTHTYLGNLQLISQYLTTLGSLAIVLRDTVQAREILRSSLTLAKKLCDVPSQVWVLTVLTALYKELGERGNELDNADYQTKKSEDLHKRLADAQASIYHIEIIERVRFEVPQLHELEIRRAMAGPSMGVNNLDIPESIGLPAQAPVPSSMLVDIDGSGRRRGKRRI*