AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0777320

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0777320 MtrunA17_Chr5g0433081 98.352 728 11 1 39 765 1 728 0.0 1482
Msa0777320 MtrunA17_Chr6g0469601 76.316 228 52 1 475 702 1 226 1.93e-119 358
Msa0777320 MtrunA17_Chr6g0469621 78.400 125 26 1 39 163 1 124 4.85e-61 202
Msa0777320 MtrunA17_Chr6g0469611 73.171 123 33 0 348 470 68 190 3.75e-55 187
Msa0777320 MtrunA17_Chr6g0469611 75.000 48 12 0 164 211 16 63 2.71e-18 84.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0777320 AT5G51340.1 61.210 727 275 5 41 765 5 726 0.0 902

Find 191 sgRNAs with CRISPR-Local

Find 659 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTCTTGAACCAGTATATTT+TGG 0.081689 5_2:-56185874 Msa0777320:CDS
GCAGTTGACACATACTTATT+TGG 0.120120 5_2:-56182053 Msa0777320:CDS
CTTGATCTTGCTGCTTCTTC+TGG 0.128782 5_2:-56189453 Msa0777320:CDS
GCAATGCAATATAGAGTTTC+TGG 0.182953 5_2:-56179339 None:intergenic
TGACATGTTAACATTATAAT+AGG 0.187357 5_2:-56179640 Msa0777320:three_prime_UTR
TACTATTTCAATATGATAAA+TGG 0.195118 5_2:+56180166 None:intergenic
TGCCAAGGGTTGTTAAATAT+TGG 0.199482 5_2:+56182011 None:intergenic
GATCTGATAACTGTTGTATT+TGG 0.202653 5_2:-56185757 Msa0777320:CDS
AGGTAAGATGGAAACCTTTC+TGG 0.205483 5_2:+56179768 None:intergenic
GCAGCTTTATATAAAGAATT+AGG 0.211220 5_2:-56180275 Msa0777320:intron
TATTGTGAATTAATTATTAT+AGG 0.234633 5_2:-56179828 Msa0777320:three_prime_UTR
GTGATGTTCCTTCTCAAGTC+TGG 0.241430 5_2:-56181910 Msa0777320:CDS
CTGCAGGCACTTGATTTGAT+TGG 0.246316 5_2:-56183261 Msa0777320:intron
CAGTTGACACATACTTATTT+GGG 0.261713 5_2:-56182052 Msa0777320:CDS
ATCCTTCAGTGATGTTATAT+TGG 0.265154 5_2:-56179494 Msa0777320:three_prime_UTR
ACATTTGCACTCACTTTATC+TGG 0.269511 5_2:+56186329 None:intergenic
GCAATGGGATGATGATAATT+TGG 0.276465 5_2:-56186399 Msa0777320:CDS
TTAATAAATGCAATGAGATT+TGG 0.289386 5_2:-56186364 Msa0777320:CDS
GACATGTTAACATTATAATA+GGG 0.305580 5_2:-56179639 Msa0777320:three_prime_UTR
GCAACACTCTTCTATCTATA+TGG 0.312255 5_2:-56184988 Msa0777320:CDS
ATGAATGGGTTCAGTTCAAT+TGG 0.315950 5_2:-56185904 Msa0777320:CDS
ATTTAGCGTGATTAGCGTTA+TGG 0.320986 5_2:+56189698 None:intergenic
GCCAAGGGTTGTTAAATATT+GGG 0.323023 5_2:+56182012 None:intergenic
AAGCAATAGCAGAAGGACTA+TGG 0.331016 5_2:-56189867 Msa0777320:CDS
CTTGATATTCCAGAATCTAT+TGG 0.335505 5_2:-56179967 Msa0777320:CDS
ATCTGATAACTGTTGTATTT+GGG 0.336485 5_2:-56185756 Msa0777320:CDS
TCATTACTAACCTGCAACTC+TGG 0.337694 5_2:+56186886 None:intergenic
CTTGCTGCTTCTTCTGGAAA+TGG 0.345137 5_2:-56189447 Msa0777320:CDS
CTGCCATTCCCAAAATATAC+TGG 0.357430 5_2:+56185865 None:intergenic
TAATAAATGCAATGAGATTT+GGG 0.359630 5_2:-56186363 Msa0777320:CDS
TTTAACAACCCTTGGCAGTT+TGG 0.361450 5_2:-56182005 Msa0777320:CDS
GCAAATGCTTTGTCAATTGA+AGG 0.362470 5_2:-56186973 Msa0777320:CDS
TGCAGGCACTTGATTTGATT+GGG 0.367684 5_2:-56183260 Msa0777320:intron
TTTAGCGTGATTAGCGTTAT+GGG 0.367809 5_2:+56189699 None:intergenic
TATTATAGGTGATTGCTCTA+AGG 0.372713 5_2:-56179814 Msa0777320:three_prime_UTR
GAATCCATTACTTCATAAAC+TGG 0.379344 5_2:+56183237 None:intergenic
AGTCAGTGTTATCATCTTGT+TGG 0.381878 5_2:-56189513 Msa0777320:CDS
ACAGGCATATCCACATTCTA+AGG 0.382816 5_2:+56186927 None:intergenic
GGAAGCCATTCCCCATCAAT+AGG 0.388509 5_2:+56185805 None:intergenic
TCTTAGATCAAAGTCTTTCC+AGG 0.393758 5_2:-56185999 Msa0777320:CDS
AGCTATTCAACCTCAGAAAC+AGG 0.402241 5_2:-56189490 Msa0777320:CDS
AGTATGCTACCCAGAGTTGC+AGG 0.403307 5_2:-56186896 Msa0777320:intron
TATAAAGAATTAGGAGAAAG+AGG 0.407292 5_2:-56180266 Msa0777320:CDS
AGGAGAAAGAGGAAATGAAT+TGG 0.410295 5_2:-56180255 Msa0777320:CDS
GACTTCAACGATTGGGAAGA+AGG 0.415786 5_2:+56189762 None:intergenic
ACTGGTGTTCTCTTTGCTTA+CGG 0.421280 5_2:-56183192 Msa0777320:CDS
AGCCAACAGAATGAGCATAT+TGG 0.429005 5_2:+56183721 None:intergenic
AAACAAGGTAATGGAGTCAA+TGG 0.429578 5_2:+56189961 None:intergenic
TGATGTTCCTTCTCAAGTCT+GGG 0.431657 5_2:-56181909 Msa0777320:CDS
AATCTGAAGACCTGCATAAG+AGG 0.433902 5_2:-56180208 Msa0777320:CDS
GCTGGCAGGCCAATAGATTC+TGG 0.437072 5_2:+56179958 None:intergenic
GTTGTAGCAATTGTTGTTGA+AGG 0.440815 5_2:-56189583 Msa0777320:intron
CTAGGACAGGAAAAGGATAT+AGG 0.442738 5_2:+56179368 None:intergenic
TTTCCTCATGGAAGTTAATC+CGG 0.443904 5_2:-56179856 Msa0777320:three_prime_UTR
GTAGGGGTTAGAGAGAAAAC+TGG 0.445928 5_2:-56183210 Msa0777320:CDS
AGTTCCACAATTACATGAGT+TGG 0.448049 5_2:-56180034 Msa0777320:CDS
AACAAGGTAATGGAGTCAAT+GGG 0.449558 5_2:+56189962 None:intergenic
TTCTGCTCGTGTGAGCTCTA+AGG 0.449899 5_2:+56184917 None:intergenic
GTTGTATTTGGGCGCCCAAA+AGG 0.455207 5_2:-56185745 Msa0777320:CDS
CCAGGTCTGATCTTCACTAC+AGG 0.456609 5_2:-56185981 Msa0777320:CDS
TTTGAGATCGTCTTTGACCT+TGG 0.457471 5_2:-56181945 Msa0777320:CDS
CGATTGGGAAGAAGGAAACT+TGG 0.457515 5_2:+56189770 None:intergenic
TCCCAATATTTAACAACCCT+TGG 0.460214 5_2:-56182013 Msa0777320:CDS
CAATCTGGATGCTGCTGTGA+GGG 0.463438 5_2:-56186073 Msa0777320:CDS
TCAATGCTAGTTGATATAGA+TGG 0.466176 5_2:-56179916 Msa0777320:CDS
CACTCTTCTATCTATATGGC+TGG 0.467721 5_2:-56184984 Msa0777320:CDS
AGAATACGCTGAAGCGCAGC+AGG 0.467829 5_2:-56184898 Msa0777320:intron
GCTGTTTCTTATATCTGCAT+TGG 0.468996 5_2:-56183405 Msa0777320:CDS
TGCACCCCATGTGGACAATC+TGG 0.469312 5_2:-56186088 Msa0777320:CDS
AATTACATGAGTTGGAAATC+AGG 0.469313 5_2:-56180026 Msa0777320:CDS
CAGTAAACTAGGACAGGAAA+AGG 0.470908 5_2:+56179361 None:intergenic
CTGCCTTTGCTATTTCTCCT+CGG 0.475620 5_2:+56189821 None:intergenic
TCATTATATTGAAGCAGTAA+AGG 0.476671 5_2:-56183679 Msa0777320:intron
TCATTATAAAAGAGCAAGCC+AGG 0.477095 5_2:+56186159 None:intergenic
AATATTGGGAAATAAGTTGA+AGG 0.479547 5_2:+56182026 None:intergenic
CATCAGCCAGCCTCTTATGC+AGG 0.479985 5_2:+56180198 None:intergenic
TTAGCACCACCTCCTATTGA+TGG 0.483364 5_2:-56185817 Msa0777320:CDS
GCAGATGAGTTATTGAAGCT+TGG 0.485607 5_2:-56185137 Msa0777320:intron
AAGAAACAGCTGCATAAACT+TGG 0.488131 5_2:+56183418 None:intergenic
TGCAATGGCAGGACCAAGCA+TGG 0.493939 5_2:-56180001 Msa0777320:CDS
GAAATCAGGCGTGCAATGGC+AGG 0.494077 5_2:-56180012 Msa0777320:CDS
ATTAATTCACAATAATATAC+CGG 0.495687 5_2:+56179837 None:intergenic
TGTGGAAAGCGCATACAGTC+GGG 0.497372 5_2:-56185709 Msa0777320:CDS
GTTGAAGAGTTTCACCAGAA+AGG 0.498557 5_2:-56179782 Msa0777320:three_prime_UTR
TGGGCCAGTTTATGAAGTAA+TGG 0.502117 5_2:-56183241 Msa0777320:CDS
CAGACAGCCTTGAGGTAAGA+TGG 0.504919 5_2:+56179756 None:intergenic
AAAAGAGAAAATAGTGGTGT+AGG 0.508592 5_2:-56179603 Msa0777320:three_prime_UTR
AGATTATTAACTCCCATGCT+TGG 0.509167 5_2:+56179988 None:intergenic
GATGGAACGGGTGCTTGTGC+TGG 0.512012 5_2:+56179940 None:intergenic
ACTAGCATTGATGATGGAAC+GGG 0.513415 5_2:+56179928 None:intergenic
AAGAAAGAAAGAAACAAGAA+TGG 0.513471 5_2:-56189890 Msa0777320:CDS
CTGATCTTCACTACAGGGAA+AGG 0.519030 5_2:-56185975 Msa0777320:CDS
ATATCAACTAGCATTGATGA+TGG 0.519320 5_2:+56179922 None:intergenic
CGTTATGGGAATGATGAAGA+AGG 0.519529 5_2:+56189713 None:intergenic
GTCAATTGAAGGAGACTACC+GGG 0.520011 5_2:-56186962 Msa0777320:CDS
TCGGGGATGCGTATAATTCA+AGG 0.520091 5_2:-56185691 Msa0777320:intron
AGCAATAGCAGAAGGACTAT+GGG 0.521406 5_2:-56189866 Msa0777320:CDS
TTAAACAAAACCTGTTTCTG+AGG 0.523904 5_2:+56189480 None:intergenic
TGAATGGGTTCAGTTCAATT+GGG 0.525092 5_2:-56185903 Msa0777320:CDS
TGCGTGACACTGTACAAGCC+AGG 0.526369 5_2:-56181973 Msa0777320:CDS
TGATGCTGAATCTAATTCAC+AGG 0.529148 5_2:-56183382 Msa0777320:intron
ATTTCCAACTCATGTAATTG+TGG 0.531387 5_2:+56180030 None:intergenic
TGCATGCCCACCTCATGCAA+TGG 0.532942 5_2:-56186415 Msa0777320:CDS
GTGTGGAAAGCGCATACAGT+CGG 0.533624 5_2:-56185710 Msa0777320:CDS
GCATACTAAATTAACTGTAC+AGG 0.534807 5_2:+56179708 None:intergenic
CATTACTAACCTGCAACTCT+GGG 0.535113 5_2:+56186887 None:intergenic
ACTCATTAAGTTACATGAGC+AGG 0.537381 5_2:-56179685 Msa0777320:three_prime_UTR
ATATTGCATTGCAGTAAACT+AGG 0.537927 5_2:+56179350 None:intergenic
GAAGGATTTCAACAAAGTTG+TGG 0.538192 5_2:-56187020 Msa0777320:intron
CACCTCCTATTGATGGGGAA+TGG 0.538532 5_2:-56185810 Msa0777320:CDS
CAGCATCCAGATTGTCCACA+TGG 0.539855 5_2:+56186082 None:intergenic
TGTAGAATTCGTTTGGCGAA+GGG 0.540683 5_2:-56182079 Msa0777320:intron
ACATGTTAACATTATAATAG+GGG 0.541331 5_2:-56179638 Msa0777320:three_prime_UTR
GTGGTAGAAGACGTGGAAAA+CGG 0.543016 5_2:-56179891 Msa0777320:CDS
TAGCACCACCTCCTATTGAT+GGG 0.543363 5_2:-56185816 Msa0777320:CDS
TGAAGACCTGCATAAGAGGC+TGG 0.544200 5_2:-56180204 Msa0777320:CDS
TGATACTAACACAACGTTCG+AGG 0.546463 5_2:+56189671 None:intergenic
AACTAGCATTGATGATGGAA+CGG 0.548065 5_2:+56179927 None:intergenic
AACAGCTGAGAAACATGAAT+GGG 0.548330 5_2:-56185918 Msa0777320:CDS
GAACGGGTGCTTGTGCTGGC+AGG 0.548345 5_2:+56179944 None:intergenic
TTGTAGAATTCGTTTGGCGA+AGG 0.549000 5_2:-56182080 Msa0777320:intron
GCATGCCCACCTCATGCAAT+GGG 0.550739 5_2:-56186414 Msa0777320:CDS
TGCATCATTGAGATGCTAAG+AGG 0.551180 5_2:-56183744 Msa0777320:CDS
GGCCAATATGCTCATTCTGT+TGG 0.551977 5_2:-56183723 Msa0777320:CDS
CATCATCCCATTGCATGAGG+TGG 0.552934 5_2:+56186408 None:intergenic
GGGAATGGCAGAAGGACACT+AGG 0.555612 5_2:-56185853 Msa0777320:CDS
TGTCAATTGAAGGAGACTAC+CGG 0.555860 5_2:-56186963 Msa0777320:CDS
TGATCTTCACTACAGGGAAA+GGG 0.555873 5_2:-56185974 Msa0777320:CDS
CTAGTTGATATAGATGGTAG+TGG 0.556656 5_2:-56179910 Msa0777320:CDS
GCATTGCAGTAAACTAGGAC+AGG 0.557438 5_2:+56179355 None:intergenic
GAACAGCTGAGAAACATGAA+TGG 0.557631 5_2:-56185919 Msa0777320:CDS
GATTGCTCTAAGGTGCAAGC+AGG 0.561848 5_2:-56179804 Msa0777320:three_prime_UTR
CACTTCAACTCAAAACAAGA+TGG 0.562475 5_2:+56189555 None:intergenic
ATCACAAAGCTTCTTTGCCA+AGG 0.563358 5_2:+56181928 None:intergenic
TCAATCAAAAGAGAAAATAG+TGG 0.563716 5_2:-56179609 Msa0777320:three_prime_UTR
TGCTTCAATATAATGAAAGA+CGG 0.567370 5_2:+56183686 None:intergenic
CCTCAGAGACAACAATGCCC+TGG 0.567425 5_2:-56186177 Msa0777320:intron
TTCCAATATAACATCACTGA+AGG 0.567580 5_2:+56179492 None:intergenic
CTGCTGTGAGGGCTGAAAAG+AGG 0.568371 5_2:-56186062 Msa0777320:CDS
ATACAATGGCCAAACTGCCA+AGG 0.569363 5_2:+56181996 None:intergenic
TCAGTTTCTTGAAAACAAAG+TGG 0.569453 5_2:-56184940 Msa0777320:CDS
GTAGCATACTTCAGTAGCAC+AGG 0.569812 5_2:+56186909 None:intergenic
TGGGTTCAGTTCAATTGGGA+GGG 0.569968 5_2:-56185899 Msa0777320:CDS
CAGGTCTGATCTTCACTACA+GGG 0.570244 5_2:-56185980 Msa0777320:CDS
AGACGATCTCAAAATCTCCC+TGG 0.571241 5_2:+56181955 None:intergenic
CCTGTAGTGAAGATCAGACC+TGG 0.572154 5_2:+56185981 None:intergenic
TCACATGGCTGTAATATAGT+CGG 0.579045 5_2:+56183768 None:intergenic
AACAAGATCTACAAGAAGCA+AGG 0.579321 5_2:-56183152 Msa0777320:intron
ATCATCCCATTGCATGAGGT+GGG 0.580026 5_2:+56186409 None:intergenic
TTGAAGCTTGGAATTACTGA+TGG 0.582266 5_2:-56185125 Msa0777320:CDS
GGTAATGGAGTCAATGGGGA+AGG 0.583473 5_2:+56189967 None:intergenic
TCAATATCCGCCTTAGAATG+TGG 0.585712 5_2:-56186937 Msa0777320:CDS
GTTGGAAATCAGGCGTGCAA+TGG 0.586610 5_2:-56180016 Msa0777320:CDS
TACAATGGCCAAACTGCCAA+GGG 0.586699 5_2:+56181997 None:intergenic
AAGGTTTCCATCTTACCTCA+AGG 0.587256 5_2:-56179763 Msa0777320:three_prime_UTR
GCAATGGCAGGACCAAGCAT+GGG 0.592635 5_2:-56180000 Msa0777320:CDS
GTCAGCACCCAGACTTGAGA+AGG 0.594095 5_2:+56181902 None:intergenic
ATGGGTTCAGTTCAATTGGG+AGG 0.607181 5_2:-56185900 Msa0777320:CDS
GCGTGACACTGTACAAGCCA+GGG 0.608865 5_2:-56181972 Msa0777320:CDS
CATTCCCCATCAATAGGAGG+TGG 0.612930 5_2:+56185811 None:intergenic
ACAATCTGGATGCTGCTGTG+AGG 0.614048 5_2:-56186074 Msa0777320:CDS
AGCATCCAGATTGTCCACAT+GGG 0.616308 5_2:+56186083 None:intergenic
TACAGTGTCACGCAATACAA+TGG 0.617237 5_2:+56181982 None:intergenic
GGATAGCTGATAGAACTCAC+TGG 0.617565 5_2:-56179664 Msa0777320:three_prime_UTR
GTAATGGAGTCAATGGGGAA+GGG 0.623908 5_2:+56189968 None:intergenic
CAAGAATGCTGCACCCCATG+TGG 0.627711 5_2:-56186097 Msa0777320:CDS
AGAATGGAAGCAATAGCAGA+AGG 0.637263 5_2:-56189874 Msa0777320:CDS
AGCCATTCCCCATCAATAGG+AGG 0.643958 5_2:+56185808 None:intergenic
GATGGTAGTGGTAGAAGACG+TGG 0.645989 5_2:-56179898 Msa0777320:CDS
CATTATAAAAGAGCAAGCCA+GGG 0.646109 5_2:+56186160 None:intergenic
AGCACCACCTCCTATTGATG+GGG 0.647753 5_2:-56185815 Msa0777320:CDS
GGAATGATGAAGAAGGATTG+TGG 0.649271 5_2:+56189720 None:intergenic
AGTTGACACATACTTATTTG+GGG 0.650368 5_2:-56182051 Msa0777320:CDS
ATCTCAATGATGCATTCACA+TGG 0.652328 5_2:+56183753 None:intergenic
GGAATTACTGATGGTGTCAG+AGG 0.653217 5_2:-56185116 Msa0777320:intron
TATCATCATCCCATTGCATG+AGG 0.653693 5_2:+56186405 None:intergenic
GTGGAAAGCGCATACAGTCG+GGG 0.661021 5_2:-56185708 Msa0777320:CDS
GCATCCAGATTGTCCACATG+GGG 0.665416 5_2:+56186084 None:intergenic
GTGGGCATGCAATAATGAAG+TGG 0.679110 5_2:+56186427 None:intergenic
GGCATATCCACATTCTAAGG+CGG 0.680003 5_2:+56186930 None:intergenic
ACACATGCAAGAGCTAGTGA+AGG 0.693732 5_2:-56186031 Msa0777320:CDS
GCAATAGCAGAAGGACTATG+GGG 0.694633 5_2:-56189865 Msa0777320:CDS
AAACCGAGGAGAAATAGCAA+AGG 0.702576 5_2:-56189824 Msa0777320:CDS
GCACATATTCTATCGTACGC+GGG 0.702651 5_2:-56186130 Msa0777320:CDS
TGCACATATTCTATCGTACG+CGG 0.710853 5_2:-56186131 Msa0777320:CDS
CTAAGGCGGATATTGAACCC+CGG 0.711903 5_2:+56186944 None:intergenic
ATACTTGACAGACAGCCTTG+AGG 0.715733 5_2:+56179748 None:intergenic
GCAGACCATCATGAAAACCG+AGG 0.718693 5_2:-56189838 Msa0777320:CDS
ATACCGGATTAACTTCCATG+AGG 0.726850 5_2:+56179853 None:intergenic
ACAAGGTAATGGAGTCAATG+GGG 0.726917 5_2:+56189963 None:intergenic
TCAATTGAAGGAGACTACCG+GGG 0.731510 5_2:-56186961 Msa0777320:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTAAAAAAATTATTAAAA+AGG + chr5_2:56182623-56182642 None:intergenic 0.0%
!! ATTAAAAAAAAACATCAAAT+TGG + chr5_2:56179723-56179742 None:intergenic 10.0%
!!! AATTTGATGTTTTTTTTTAA+TGG - chr5_2:56179722-56179741 Msa0777320:three_prime_UTR 10.0%
!!! ATTTGATGTTTTTTTTTAAT+GGG - chr5_2:56179723-56179742 Msa0777320:three_prime_UTR 10.0%
!! TATATATATTCATTCAAATA+AGG + chr5_2:56181131-56181150 None:intergenic 10.0%
!!! TTTATTTATTTATTTCTGTT+TGG - chr5_2:56181301-56181320 Msa0777320:intron 10.0%
!!! TTTTTTTAATTCATAAATTC+TGG - chr5_2:56182199-56182218 Msa0777320:intron 10.0%
!!! TTTTTTAATTCATAAATTCT+GGG - chr5_2:56182200-56182219 Msa0777320:intron 10.0%
!!! TTTTTTGTTTATTTTATTGA+AGG - chr5_2:56182307-56182326 Msa0777320:intron 10.0%
!!! TTATAAAATAGTTTAAAACA+GGG + chr5_2:56187946-56187965 None:intergenic 10.0%
!!! TTTTAAACTATTTTATAAGT+TGG - chr5_2:56187948-56187967 Msa0777320:intron 10.0%
!! TATTGTGAATTAATTATTAT+AGG - chr5_2:56189517-56189536 Msa0777320:CDS 10.0%
!!! TTTTTATTTTGTTTGAAACA+AGG + chr5_2:56179402-56179421 None:intergenic 15.0%
!!! ATTCCATAGTTTTAAAAAAA+TGG + chr5_2:56180458-56180477 None:intergenic 15.0%
!!! ATTTTTTTAAAACTATGGAA+TGG - chr5_2:56180457-56180476 Msa0777320:intron 15.0%
!! TTATTACGACAAATAAAAAT+TGG - chr5_2:56181354-56181373 Msa0777320:intron 15.0%
!! AATTAAGTAAACTAATGAAT+CGG + chr5_2:56182535-56182554 None:intergenic 15.0%
!!! TTATTAAAAAGGTCATTTTA+GGG + chr5_2:56182612-56182631 None:intergenic 15.0%
!!! ATTATTAAAAAGGTCATTTT+AGG + chr5_2:56182613-56182632 None:intergenic 15.0%
!! TTTGAATCGAAAATAAAAAA+TGG - chr5_2:56183790-56183809 Msa0777320:CDS 15.0%
!! AACATAAAGAAAATAAAGAT+GGG + chr5_2:56185073-56185092 None:intergenic 15.0%
!!! TTCAAATTTGAAATGATTAA+TGG - chr5_2:56185381-56185400 Msa0777320:intron 15.0%
!!! CAAAAATATGAAGTTATTTT+TGG + chr5_2:56185870-56185889 None:intergenic 15.0%
!! TCAATTAATTAAACATTACA+TGG - chr5_2:56187160-56187179 Msa0777320:intron 15.0%
!! CAATTAATTAAACATTACAT+GGG - chr5_2:56187161-56187180 Msa0777320:intron 15.0%
!!! TATAAAATAGTTTAAAACAG+GGG + chr5_2:56187945-56187964 None:intergenic 15.0%
!!! CTTATAAAATAGTTTAAAAC+AGG + chr5_2:56187947-56187966 None:intergenic 15.0%
!!! CAAATTCAATTGTTTTTTTA+GGG + chr5_2:56188331-56188350 None:intergenic 15.0%
!!! TCAAATTCAATTGTTTTTTT+AGG + chr5_2:56188332-56188351 None:intergenic 15.0%
!! TACTATTTCAATATGATAAA+TGG + chr5_2:56189182-56189201 None:intergenic 15.0%
!! ATTAATTCACAATAATATAC+CGG + chr5_2:56189511-56189530 None:intergenic 15.0%
!!! CTTTTCATCTTTTAGTATTT+AGG - chr5_2:56179947-56179966 Msa0777320:CDS 20.0%
!!! TTTGGTATTATTTTGTATCA+GGG - chr5_2:56180269-56180288 Msa0777320:CDS 20.0%
!! AAACAGCAAATGTTAATATT+TGG + chr5_2:56180327-56180346 None:intergenic 20.0%
!!! GAACCATTTTTTTAAAACTA+TGG - chr5_2:56180452-56180471 Msa0777320:intron 20.0%
!!! CATTTTTTTAAAACCTTGAA+TGG - chr5_2:56180846-56180865 Msa0777320:intron 20.0%
!!! ACAAATAATAACAAGTATTG+CGG - chr5_2:56180963-56180982 Msa0777320:intron 20.0%
!!! TGTTTTTATAAAAAGTGCAT+TGG - chr5_2:56181254-56181273 Msa0777320:intron 20.0%
!!! GTTTTTATAAAAAGTGCATT+GGG - chr5_2:56181255-56181274 Msa0777320:intron 20.0%
!! TCTGATAATATATATGTCAA+AGG - chr5_2:56182123-56182142 Msa0777320:intron 20.0%
!! TTAATAAATGCAATGAGATT+TGG - chr5_2:56182981-56183000 Msa0777320:intron 20.0%
!! TAATAAATGCAATGAGATTT+GGG - chr5_2:56182982-56183001 Msa0777320:intron 20.0%
!! GTGTTAGATTAAGTTAAAAA+AGG + chr5_2:56183124-56183143 None:intergenic 20.0%
!!! TGCATAAATTTTACTTCTTT+TGG - chr5_2:56183708-56183727 Msa0777320:CDS 20.0%
!! GAAGAAAAATTATTTCCATA+AGG + chr5_2:56184186-56184205 None:intergenic 20.0%
!!! TTTTGTCTTCTTTGTTTAAA+GGG + chr5_2:56184593-56184612 None:intergenic 20.0%
!!! TTTTTGTCTTCTTTGTTTAA+AGG + chr5_2:56184594-56184613 None:intergenic 20.0%
!! GGAAAAATACATAATACAAA+AGG - chr5_2:56184814-56184833 Msa0777320:intron 20.0%
!! AAAATACATAATACAAAAGG+AGG - chr5_2:56184817-56184836 Msa0777320:intron 20.0%
!! CAACATAAAGAAAATAAAGA+TGG + chr5_2:56185074-56185093 None:intergenic 20.0%
!!! TTTTTCTTGTACTATTTTAG+TGG - chr5_2:56185320-56185339 Msa0777320:intron 20.0%
!!! TTTCAAATTTGAAGTATAAC+AGG + chr5_2:56185374-56185393 None:intergenic 20.0%
!! TATAAAATTGTTTAGCATAG+TGG - chr5_2:56185437-56185456 Msa0777320:intron 20.0%
!!! TCAGATCTGAAATTTATTAA+TGG - chr5_2:56185499-56185518 Msa0777320:intron 20.0%
!!! ATTTTTATTCAAATTCGATC+AGG - chr5_2:56186230-56186249 Msa0777320:intron 20.0%
!! ATACAAACAAGACTATAAAT+TGG + chr5_2:56186279-56186298 None:intergenic 20.0%
!!! AATTTATAGTCTTGTTTGTA+TGG - chr5_2:56186278-56186297 Msa0777320:intron 20.0%
!! TTGTTCAAAATAACTTATTC+TGG - chr5_2:56186453-56186472 Msa0777320:intron 20.0%
!!! AATTTTTGCTTATTAATTCC+AGG + chr5_2:56186561-56186580 None:intergenic 20.0%
!! GTTTATCAATCAATAAATGT+AGG + chr5_2:56187077-56187096 None:intergenic 20.0%
!! CAAAAAAAAAAAATGCAACT+TGG + chr5_2:56187248-56187267 None:intergenic 20.0%
!!! TTTTTTTTGTAGAATTCGTT+TGG - chr5_2:56187259-56187278 Msa0777320:intron 20.0%
!!! ATAAAATAGTTTAAAACAGG+GGG + chr5_2:56187944-56187963 None:intergenic 20.0%
!! GTGAATTAGATTAACTTAAT+TGG - chr5_2:56188145-56188164 Msa0777320:intron 20.0%
!! AGTGTAAAAATTAATGAATG+TGG + chr5_2:56188253-56188272 None:intergenic 20.0%
!! CAGATAGATTCTTTATAATA+AGG - chr5_2:56188406-56188425 Msa0777320:intron 20.0%
!! ATGCGAATCTATAAAAAAAT+TGG + chr5_2:56188601-56188620 None:intergenic 20.0%
!! TGACATGTTAACATTATAAT+AGG - chr5_2:56189705-56189724 Msa0777320:CDS 20.0%
!! GACATGTTAACATTATAATA+GGG - chr5_2:56189706-56189725 Msa0777320:CDS 20.0%
!! ACATGTTAACATTATAATAG+GGG - chr5_2:56189707-56189726 Msa0777320:CDS 20.0%
!!! AATTTTATGTATAGCACATT+TGG - chr5_2:56189904-56189923 Msa0777320:CDS 20.0%
!!! TTTTGTTTGAAACAAGGTAA+TGG + chr5_2:56179396-56179415 None:intergenic 25.0%
! AAGAAAGAAAGAAACAAGAA+TGG - chr5_2:56179455-56179474 Msa0777320:three_prime_UTR 25.0%
! AAACATCAAATTGGAACAAA+GGG + chr5_2:56179714-56179733 None:intergenic 25.0%
! AAAACATCAAATTGGAACAA+AGG + chr5_2:56179715-56179734 None:intergenic 25.0%
! ACAATTGTTAACATTATGCT+GGG + chr5_2:56180090-56180109 None:intergenic 25.0%
! AACAATTGTTAACATTATGC+TGG + chr5_2:56180091-56180110 None:intergenic 25.0%
!! ATATTTTGTAAGAGACGAAA+TGG + chr5_2:56180142-56180161 None:intergenic 25.0%
! GAAAATGTTAGCAACTAATT+TGG + chr5_2:56180170-56180189 None:intergenic 25.0%
!!! GTTTGGTATTATTTTGTATC+AGG - chr5_2:56180268-56180287 Msa0777320:CDS 25.0%
!!! GAAGGTTTTTGATATTTTTG+CGG - chr5_2:56180548-56180567 Msa0777320:intron 25.0%
!!! ATCCTTTTTCAACAATAAGA+GGG - chr5_2:56180875-56180894 Msa0777320:intron 25.0%
!!! TACCAATGAGTTTTGTTTTT+TGG - chr5_2:56181012-56181031 Msa0777320:intron 25.0%
! AACCAAAAAACAAAACTCAT+TGG + chr5_2:56181017-56181036 None:intergenic 25.0%
! TATCTTGCTTTCTTAGTTAT+TGG - chr5_2:56181044-56181063 Msa0777320:intron 25.0%
!!! TTATGATTTGCTTGCTATTT+TGG - chr5_2:56181152-56181171 Msa0777320:intron 25.0%
!! ATAACAAGTTCTTTTAGACT+TGG + chr5_2:56181471-56181490 None:intergenic 25.0%
! AGGAGAAAAATACTAACATT+TGG - chr5_2:56181579-56181598 Msa0777320:intron 25.0%
! AGCTTGTCATAATTTATAGA+AGG + chr5_2:56181755-56181774 None:intergenic 25.0%
! TCTATAAATTATGACAAGCT+TGG - chr5_2:56181755-56181774 Msa0777320:intron 25.0%
! TGGTAAATACCAAATAGTTA+TGG - chr5_2:56181849-56181868 Msa0777320:intron 25.0%
!! AAAATGCTGGTTAGTATAAA+TGG - chr5_2:56181872-56181891 Msa0777320:intron 25.0%
!! AAATGCTGGTTAGTATAAAT+GGG - chr5_2:56181873-56181892 Msa0777320:intron 25.0%
! TTCCTTTATAATTTACACTC+TGG + chr5_2:56181923-56181942 None:intergenic 25.0%
! AAATGTATGTATAGCTGTAT+AGG + chr5_2:56182058-56182077 None:intergenic 25.0%
! TAATTCATAAATTCTGGGTT+TGG - chr5_2:56182205-56182224 Msa0777320:intron 25.0%
! AAGTGATGACTTAAGAATAA+GGG + chr5_2:56182713-56182732 None:intergenic 25.0%
! AAAGTGATGACTTAAGAATA+AGG + chr5_2:56182714-56182733 None:intergenic 25.0%
! AAAATTGTCATAATAGAAGC+TGG + chr5_2:56182748-56182767 None:intergenic 25.0%
! AATTCCTTGTGTTATCATAA+TGG - chr5_2:56182880-56182899 Msa0777320:intron 25.0%
! ATCTGATAACTGTTGTATTT+GGG - chr5_2:56183589-56183608 Msa0777320:intron 25.0%
!!! AATTTTACTTCTTTTGGCTT+TGG - chr5_2:56183714-56183733 Msa0777320:CDS 25.0%
!! TGAAAGCATAAAAATCTTGT+AGG + chr5_2:56184278-56184297 None:intergenic 25.0%
! CAACAACAAATAAAAGAAGT+AGG - chr5_2:56184633-56184652 Msa0777320:intron 25.0%
!!! TTTTAGCGTTTAAAACAGTT+TGG - chr5_2:56185037-56185056 Msa0777320:intron 25.0%
! CATTTAATATCCACCTTATT+AGG - chr5_2:56185278-56185297 Msa0777320:intron 25.0%
!!! TTTTAGTGGATTTGAAAAGT+TGG - chr5_2:56185334-56185353 Msa0777320:intron 25.0%
!! TTTCAGATCTGAAATATAAC+AGG + chr5_2:56185491-56185510 None:intergenic 25.0%
! TGCTTCAATATAATGAAAGA+CGG + chr5_2:56185662-56185681 None:intergenic 25.0%
! TCATTATATTGAAGCAGTAA+AGG - chr5_2:56185666-56185685 Msa0777320:intron 25.0%
! ATAATGATATGAACTGTTGA+TGG - chr5_2:56185826-56185845 Msa0777320:CDS 25.0%
! TAATGATATGAACTGTTGAT+GGG - chr5_2:56185827-56185846 Msa0777320:CDS 25.0%
! AGTTGTACCTCTAATTTAAT+TGG - chr5_2:56185989-56186008 Msa0777320:CDS 25.0%
! AAAAAAAAAATAACGCCCAT+GGG + chr5_2:56186045-56186064 None:intergenic 25.0%
! AAAAAAAAAAATAACGCCCA+TGG + chr5_2:56186046-56186065 None:intergenic 25.0%
!!! AAGTAATGGATTCTTTTGTA+GGG - chr5_2:56186118-56186137 Msa0777320:CDS 25.0%
! GTTATAGAAAGTAGAAACAT+TGG + chr5_2:56186304-56186323 None:intergenic 25.0%
! GAAAAATTCAACAAAAGTCT+TGG + chr5_2:56186367-56186386 None:intergenic 25.0%
! AAATTGAAGAATGATAGTTG+TGG + chr5_2:56186435-56186454 None:intergenic 25.0%
!!! TATAAGCATGTTTTTTTTCC+TGG - chr5_2:56186540-56186559 Msa0777320:intron 25.0%
!!! TCTCGATTCTTTTATTTCAA+TGG - chr5_2:56187136-56187155 Msa0777320:intron 25.0%
! GAAATAGAAACATCAAACTA+AGG + chr5_2:56187213-56187232 None:intergenic 25.0%
! AAAAAAAAAATGCAACTTGG+AGG + chr5_2:56187245-56187264 None:intergenic 25.0%
!! AATATTGGGAAATAAGTTGA+AGG + chr5_2:56187322-56187341 None:intergenic 25.0%
! TATTTCCCAAACTATAACTT+GGG + chr5_2:56187540-56187559 None:intergenic 25.0%
! TATAAAATCAGAGATTAACG+AGG + chr5_2:56188015-56188034 None:intergenic 25.0%
!! TAATTTTTACACTGTTCTCT+TGG - chr5_2:56188260-56188279 Msa0777320:intron 25.0%
! AGTGAGAAATTCAAGATAAT+AGG - chr5_2:56188372-56188391 Msa0777320:intron 25.0%
! GTGAGAAATTCAAGATAATA+GGG - chr5_2:56188373-56188392 Msa0777320:intron 25.0%
! TGAGAAATTCAAGATAATAG+GGG - chr5_2:56188374-56188393 Msa0777320:intron 25.0%
! ATAATAAGGAAAAACCATAG+AGG - chr5_2:56188420-56188439 Msa0777320:intron 25.0%
! TAATAAGGAAAAACCATAGA+GGG - chr5_2:56188421-56188440 Msa0777320:intron 25.0%
!! TACGATTTTATGATTAAGTG+AGG + chr5_2:56188517-56188536 None:intergenic 25.0%
! CACTTAATCATAAAATCGTA+TGG - chr5_2:56188517-56188536 Msa0777320:intron 25.0%
! TTTATGACTCTAGTTATCAA+AGG - chr5_2:56188541-56188560 Msa0777320:intron 25.0%
! GCTTACAAAATTGTTAAACT+TGG - chr5_2:56188575-56188594 Msa0777320:intron 25.0%
! TGAACTAGTCAATAACATAA+TGG - chr5_2:56188643-56188662 Msa0777320:intron 25.0%
!! GGTTTTCAAACAAAAAAACT+TGG + chr5_2:56188704-56188723 None:intergenic 25.0%
! AAAACTCATTAAATCTCCAT+AGG + chr5_2:56188854-56188873 None:intergenic 25.0%
!! TGAATCAAAGTTTTCAAACA+TGG + chr5_2:56188884-56188903 None:intergenic 25.0%
! AAAACTTTGATTCAAACCAT+TGG - chr5_2:56188890-56188909 Msa0777320:intron 25.0%
! AAACTTTGATTCAAACCATT+GGG - chr5_2:56188891-56188910 Msa0777320:intron 25.0%
!! GCAGCTTTATATAAAGAATT+AGG - chr5_2:56189070-56189089 Msa0777320:intron 25.0%
! TATAAAGAATTAGGAGAAAG+AGG - chr5_2:56189079-56189098 Msa0777320:intron 25.0%
! TCTCAATCTGTTAATCAAAA+CGG + chr5_2:56189278-56189297 None:intergenic 25.0%
! TCAATCAAAAGAGAAAATAG+TGG - chr5_2:56189736-56189755 Msa0777320:CDS 25.0%
AACATCAAATTGGAACAAAG+GGG + chr5_2:56179713-56179732 None:intergenic 30.0%
!! TTAAACAAAACCTGTTTCTG+AGG + chr5_2:56179868-56179887 None:intergenic 30.0%
!!! TCAGAAACAGGTTTTGTTTA+AGG - chr5_2:56179867-56179886 Msa0777320:exon 30.0%
!!! CAGAAACAGGTTTTGTTTAA+GGG - chr5_2:56179868-56179887 Msa0777320:exon 30.0%
! TTTTGTATCAGGGAGTTAAT+TGG - chr5_2:56180279-56180298 Msa0777320:intron 30.0%
TTTGTATCAGGGAGTTAATT+GGG - chr5_2:56180280-56180299 Msa0777320:intron 30.0%
GAAACTGTATTAACCACTAT+TGG + chr5_2:56180409-56180428 None:intergenic 30.0%
! TTTAAAACCTTGCTCAAAGA+CGG - chr5_2:56180607-56180626 Msa0777320:intron 30.0%
! TGTCAAGACATCATGATTTT+TGG + chr5_2:56180815-56180834 None:intergenic 30.0%
AAAATCATGATGTCTTGACA+AGG - chr5_2:56180815-56180834 Msa0777320:intron 30.0%
AAATCATGATGTCTTGACAA+GGG - chr5_2:56180816-56180835 Msa0777320:intron 30.0%
CTCTTATTGTTGAAAAAGGA+TGG + chr5_2:56180876-56180895 None:intergenic 30.0%
!!! CATCCTTTTTCAACAATAAG+AGG - chr5_2:56180874-56180893 Msa0777320:intron 30.0%
AACCCTCTTATTGTTGAAAA+AGG + chr5_2:56180880-56180899 None:intergenic 30.0%
AGAGGGTTATATGAAAAACT+TGG - chr5_2:56180892-56180911 Msa0777320:intron 30.0%
TTTGTAGGTTGTGTACAAAA+GGG - chr5_2:56181097-56181116 Msa0777320:intron 30.0%
TTAGAACATATTAGCATGTC+TGG - chr5_2:56181181-56181200 Msa0777320:intron 30.0%
!! TTATTTCTGTTTGGTTCCAT+TGG - chr5_2:56181310-56181329 Msa0777320:intron 30.0%
! CTGTTTGATTTAGATTCCAA+TGG + chr5_2:56181329-56181348 None:intergenic 30.0%
! AAAAAACAGTACCGAACTAT+AGG - chr5_2:56181427-56181446 Msa0777320:intron 30.0%
! AAAAACAGTACCGAACTATA+GGG - chr5_2:56181428-56181447 Msa0777320:intron 30.0%
TAACAGTTAGTTAACTAGAG+AGG + chr5_2:56181664-56181683 None:intergenic 30.0%
! CAGCATTTTCCATAACTATT+TGG + chr5_2:56181861-56181880 None:intergenic 30.0%
CAAATAGTTATGGAAAATGC+TGG - chr5_2:56181859-56181878 Msa0777320:intron 30.0%
CACCAGAGTGTAAATTATAA+AGG - chr5_2:56181918-56181937 Msa0777320:CDS 30.0%
AGCATAAATAATAGGGGATA+TGG + chr5_2:56181966-56181985 None:intergenic 30.0%
AGGGACAAGCATAAATAATA+GGG + chr5_2:56181973-56181992 None:intergenic 30.0%
GATATGAATGTGTGAAAAGA+GGG + chr5_2:56181992-56182011 None:intergenic 30.0%
TGATATGAATGTGTGAAAAG+AGG + chr5_2:56181993-56182012 None:intergenic 30.0%
ACTCATGTGGAAAAAGTAAA+AGG + chr5_2:56182096-56182115 None:intergenic 30.0%
GTTGAATATTGATGAACAAC+TGG - chr5_2:56182161-56182180 Msa0777320:intron 30.0%
AAGAATAAGGGAAGGAAAAA+AGG + chr5_2:56182701-56182720 None:intergenic 30.0%
! TAGCAAACTAAAAGCACAAT+TGG + chr5_2:56182836-56182855 None:intergenic 30.0%
TTAAGTTAAAAAAGGACTCG+TGG + chr5_2:56183116-56183135 None:intergenic 30.0%
! TCTCTTGAACCAGTATATTT+TGG - chr5_2:56183471-56183490 Msa0777320:intron 30.0%
! CTCTTGAACCAGTATATTTT+GGG - chr5_2:56183472-56183491 Msa0777320:intron 30.0%
GATCTGATAACTGTTGTATT+TGG - chr5_2:56183588-56183607 Msa0777320:intron 30.0%
! ACTCCTTAAAAAGTCCTTTT+GGG + chr5_2:56183617-56183636 None:intergenic 30.0%
! TTGGATTGATTTATTGCTTG+TGG - chr5_2:56183733-56183752 Msa0777320:CDS 30.0%
ATCATTAGACTGCAAATTCA+AGG - chr5_2:56183761-56183780 Msa0777320:CDS 30.0%
TCATTAGACTGCAAATTCAA+GGG - chr5_2:56183762-56183781 Msa0777320:CDS 30.0%
! GCAAGTAAAAAGGTATAACT+CGG + chr5_2:56183885-56183904 None:intergenic 30.0%
CACAACAGCAATGAATAATA+AGG + chr5_2:56184117-56184136 None:intergenic 30.0%
TAAGGAAAATGAGTCTAAAG+CGG + chr5_2:56184168-56184187 None:intergenic 30.0%
! CTTTAGACTCATTTTCCTTA+TGG - chr5_2:56184168-56184187 Msa0777320:intron 30.0%
TCAGTTTCTTGAAAACAAAG+TGG - chr5_2:56184405-56184424 Msa0777320:intron 30.0%
GGTTATGTCAATGCTATTAA+CGG - chr5_2:56184472-56184491 Msa0777320:intron 30.0%
CAAATAAAAGAAGTAGGACA+AGG - chr5_2:56184639-56184658 Msa0777320:intron 30.0%
AGATATGCATAGCAGAATAA+TGG - chr5_2:56184758-56184777 Msa0777320:intron 30.0%
GATATGCATAGCAGAATAAT+GGG - chr5_2:56184759-56184778 Msa0777320:intron 30.0%
! ATGGTGGAACTTAGAAAATA+TGG - chr5_2:56184793-56184812 Msa0777320:intron 30.0%
AAAAGGAGGAAAACAAAACA+TGG - chr5_2:56184831-56184850 Msa0777320:intron 30.0%
! CAGTTTTCTCAAGTAAATCA+TGG + chr5_2:56184868-56184887 None:intergenic 30.0%
TTAATATCCACCTTATTAGG+TGG - chr5_2:56185281-56185300 Msa0777320:intron 30.0%
! CTTTGGTTCAGATGAAAAAT+TGG - chr5_2:56185542-56185561 Msa0777320:intron 30.0%
! AGATGAAAAATTGGTTCATG+CGG - chr5_2:56185551-56185570 Msa0777320:intron 30.0%
AATGATATGAACTGTTGATG+GGG - chr5_2:56185828-56185847 Msa0777320:CDS 30.0%
!! TCATATTTTTGTGTAGCTCA+CGG - chr5_2:56185879-56185898 Msa0777320:CDS 30.0%
GAATCCATTACTTCATAAAC+TGG + chr5_2:56186111-56186130 None:intergenic 30.0%
!!! GAAGTAATGGATTCTTTTGT+AGG - chr5_2:56186117-56186136 Msa0777320:CDS 30.0%
!!! AGTAATGGATTCTTTTGTAG+GGG - chr5_2:56186119-56186138 Msa0777320:CDS 30.0%
CAAATAATGATGAGATACTG+AGG + chr5_2:56186660-56186679 None:intergenic 30.0%
!! CAATTTTGATGAGTATTCAC+TGG + chr5_2:56186818-56186837 None:intergenic 30.0%
AAAGGAGAAATAAATTCAGC+CGG + chr5_2:56186909-56186928 None:intergenic 30.0%
CAGTTGACACATACTTATTT+GGG - chr5_2:56187293-56187312 Msa0777320:intron 30.0%
AGTTGACACATACTTATTTG+GGG - chr5_2:56187294-56187313 Msa0777320:intron 30.0%
CTATTTCCCAAACTATAACT+TGG + chr5_2:56187541-56187560 None:intergenic 30.0%
!! AAATGTTGTTTAAGAGTGTC+TGG - chr5_2:56187649-56187668 Msa0777320:intron 30.0%
TGGTATTCTAATGTTAGTTC+TGG - chr5_2:56187764-56187783 Msa0777320:intron 30.0%
TAACCTTGCTAATCTTATCA+AGG - chr5_2:56188088-56188107 Msa0777320:intron 30.0%
TGGTATTAGTGATCTGATAT+AGG - chr5_2:56188165-56188184 Msa0777320:intron 30.0%
AAAAAACTGACACATACATC+AGG + chr5_2:56188217-56188236 None:intergenic 30.0%
!!! TCAGTTTTTTAGCAGATCAA+AGG - chr5_2:56188227-56188246 Msa0777320:intron 30.0%
TTATCTTGAATTTCTCACTC+TGG + chr5_2:56188371-56188390 None:intergenic 30.0%
!!! ATGTGTGTTGATTTTATCCA+TGG - chr5_2:56188481-56188500 Msa0777320:intron 30.0%
ATGCATGCCTAAAATAACAA+TGG - chr5_2:56188678-56188697 Msa0777320:intron 30.0%
!!! AACTTGGCCATTGTTATTTT+AGG + chr5_2:56188688-56188707 None:intergenic 30.0%
! TCATTCAACTGTTGCATTTT+AGG + chr5_2:56188725-56188744 None:intergenic 30.0%
AATGCAACAGTTGAATGATA+AGG - chr5_2:56188727-56188746 Msa0777320:intron 30.0%
TAGAAAACTGTAAGATCAAG+CGG + chr5_2:56188822-56188841 None:intergenic 30.0%
GTATTTATACAGGACTAACT+CGG - chr5_2:56188917-56188936 Msa0777320:intron 30.0%
ATTTCCAACTCATGTAATTG+TGG + chr5_2:56189318-56189337 None:intergenic 30.0%
CTTGATATTCCAGAATCTAT+TGG - chr5_2:56189378-56189397 Msa0777320:intron 30.0%
!! ATATCAACTAGCATTGATGA+TGG + chr5_2:56189426-56189445 None:intergenic 30.0%
! TCAATGCTAGTTGATATAGA+TGG - chr5_2:56189429-56189448 Msa0777320:intron 30.0%
! AGAATTTAGTGTTTTCCTCA+TGG - chr5_2:56189477-56189496 Msa0777320:CDS 30.0%
TATTATAGGTGATTGCTCTA+AGG - chr5_2:56189531-56189550 Msa0777320:CDS 30.0%
GCATACTAAATTAACTGTAC+AGG + chr5_2:56189640-56189659 None:intergenic 30.0%
AAAAGAGAAAATAGTGGTGT+AGG - chr5_2:56189742-56189761 Msa0777320:CDS 30.0%
ATCCTTCAGTGATGTTATAT+TGG - chr5_2:56189851-56189870 Msa0777320:CDS 30.0%
TTCCAATATAACATCACTGA+AGG + chr5_2:56189856-56189875 None:intergenic 30.0%
ATATTGCATTGCAGTAAACT+AGG + chr5_2:56189998-56190017 None:intergenic 30.0%
!! AACAAGGTAATGGAGTCAAT+GGG + chr5_2:56179386-56179405 None:intergenic 35.0%
!! AAACAAGGTAATGGAGTCAA+TGG + chr5_2:56179387-56179406 None:intergenic 35.0%
!!! GAGTTTTGACTTCAACGATT+GGG + chr5_2:56179593-56179612 None:intergenic 35.0%
TTTAGCGTGATTAGCGTTAT+GGG + chr5_2:56179649-56179668 None:intergenic 35.0%
ATTTAGCGTGATTAGCGTTA+TGG + chr5_2:56179650-56179669 None:intergenic 35.0%
AAATTGGAACAAAGGGGTTA+AGG + chr5_2:56179707-56179726 None:intergenic 35.0%
! GTTGTAGCAATTGTTGTTGA+AGG - chr5_2:56179762-56179781 Msa0777320:three_prime_UTR 35.0%
CACTTCAACTCAAAACAAGA+TGG + chr5_2:56179793-56179812 None:intergenic 35.0%
AGTCAGTGTTATCATCTTGT+TGG - chr5_2:56179832-56179851 Msa0777320:three_prime_UTR 35.0%
! TGCTAACATTTTCACACTGA+AGG - chr5_2:56180177-56180196 Msa0777320:CDS 35.0%
TCCCCAATTTGAAAATGTCA+AGG - chr5_2:56180241-56180260 Msa0777320:CDS 35.0%
! CCCTTGACATTTTCAAATTG+GGG + chr5_2:56180245-56180264 None:intergenic 35.0%
CCCCAATTTGAAAATGTCAA+GGG - chr5_2:56180242-56180261 Msa0777320:CDS 35.0%
! GCCCTTGACATTTTCAAATT+GGG + chr5_2:56180246-56180265 None:intergenic 35.0%
! AGCCCTTGACATTTTCAAAT+TGG + chr5_2:56180247-56180266 None:intergenic 35.0%
GAAAAGTCATTGTCCAATAG+TGG - chr5_2:56180393-56180412 Msa0777320:intron 35.0%
! TTTGTGCTTTGTTCAACAGT+AGG - chr5_2:56180482-56180501 Msa0777320:intron 35.0%
! TTGTGCTTTGTTCAACAGTA+GGG - chr5_2:56180483-56180502 Msa0777320:intron 35.0%
CAATTTCGACTGTGATATGA+AGG - chr5_2:56180530-56180549 Msa0777320:intron 35.0%
!!! CGGCATAACAATTTTTTGCT+AGG + chr5_2:56180655-56180674 None:intergenic 35.0%
AGCAAAAAATTGTTATGCCG+CGG - chr5_2:56180655-56180674 Msa0777320:intron 35.0%
!!! TCATTTTCTAAAACCCCGAT+AGG - chr5_2:56180696-56180715 Msa0777320:intron 35.0%
ACAACAAGATGAAGACCTAT+CGG + chr5_2:56180714-56180733 None:intergenic 35.0%
CACAGAATTGCAATCAAATG+TGG - chr5_2:56180748-56180767 Msa0777320:intron 35.0%
!! TGTGGTTGATACAGTTTTAC+TGG - chr5_2:56180766-56180785 Msa0777320:intron 35.0%
! TTTTACTGGCAGTCAAATTG+CGG - chr5_2:56180780-56180799 Msa0777320:intron 35.0%
AAAGGATGGTATTCCATTCA+AGG + chr5_2:56180862-56180881 None:intergenic 35.0%
AAAACTTGGCAACCACAATT+TGG - chr5_2:56180906-56180925 Msa0777320:intron 35.0%
AAACTTGGCAACCACAATTT+GGG - chr5_2:56180907-56180926 Msa0777320:intron 35.0%
TGATACAACAACCCAAATTG+TGG + chr5_2:56180921-56180940 None:intergenic 35.0%
!! GTAATCAAGATTTTAGCCTG+TGG + chr5_2:56180995-56181014 None:intergenic 35.0%
GATTGATCAATCCTCATTTG+CGG - chr5_2:56181066-56181085 Msa0777320:intron 35.0%
CTTTGTAGGTTGTGTACAAA+AGG - chr5_2:56181096-56181115 Msa0777320:intron 35.0%
TCTTCTGTATCCCTATAGTT+CGG + chr5_2:56181441-56181460 None:intergenic 35.0%
! ACAAGTTCTTTTAGACTTGG+AGG + chr5_2:56181468-56181487 None:intergenic 35.0%
ATTAGTTACTCTGTGAGAGA+TGG - chr5_2:56181492-56181511 Msa0777320:intron 35.0%
TTAGTTACTCTGTGAGAGAT+GGG - chr5_2:56181493-56181512 Msa0777320:intron 35.0%
TGAGCTAAGGGTTTAAAGAA+TGG - chr5_2:56181530-56181549 Msa0777320:intron 35.0%
GAGCTAAGGGTTTAAAGAAT+GGG - chr5_2:56181531-56181550 Msa0777320:intron 35.0%
!! TACTGCCATACTTTTAACTG+AGG - chr5_2:56181682-56181701 Msa0777320:intron 35.0%
GGGACAAGCATAAATAATAG+GGG + chr5_2:56181972-56181991 None:intergenic 35.0%
GAGGGACAAGCATAAATAAT+AGG + chr5_2:56181974-56181993 None:intergenic 35.0%
ATCAGACACAAATACTCATG+TGG + chr5_2:56182109-56182128 None:intergenic 35.0%
AACATGCAATGCAGTCAAAT+TGG + chr5_2:56182282-56182301 None:intergenic 35.0%
GAAGGATTTCAACAAAGTTG+TGG - chr5_2:56182325-56182344 Msa0777320:intron 35.0%
GCAAATGCTTTGTCAATTGA+AGG - chr5_2:56182372-56182391 Msa0777320:intron 35.0%
AGTTGCAGGTTAGTAATGAA+AGG - chr5_2:56182463-56182482 Msa0777320:intron 35.0%
AACTAATACGTAGAACCTTC+TGG - chr5_2:56182560-56182579 Msa0777320:intron 35.0%
TTAAAGACAAAGCTTCCAGA+AGG + chr5_2:56182578-56182597 None:intergenic 35.0%
!!! AAAGGTCATTTTAGGGCTTT+TGG + chr5_2:56182605-56182624 None:intergenic 35.0%
GATGACTTAAGAATAAGGGA+AGG + chr5_2:56182709-56182728 None:intergenic 35.0%
TGGTCCATTATGATAACACA+AGG + chr5_2:56182887-56182906 None:intergenic 35.0%
GCAATGGGATGATGATAATT+TGG - chr5_2:56182946-56182965 Msa0777320:intron 35.0%
ACATTTGCACTCACTTTATC+TGG + chr5_2:56183019-56183038 None:intergenic 35.0%
CATTATAAAAGAGCAAGCCA+GGG + chr5_2:56183188-56183207 None:intergenic 35.0%
TCATTATAAAAGAGCAAGCC+AGG + chr5_2:56183189-56183208 None:intergenic 35.0%
TCTTAGATCAAAGTCTTTCC+AGG - chr5_2:56183346-56183365 Msa0777320:intron 35.0%
AACAGCTGAGAAACATGAAT+GGG - chr5_2:56183427-56183446 Msa0777320:CDS 35.0%
! ATGAATGGGTTCAGTTCAAT+TGG - chr5_2:56183441-56183460 Msa0777320:CDS 35.0%
! TGAATGGGTTCAGTTCAATT+GGG - chr5_2:56183442-56183461 Msa0777320:CDS 35.0%
!! GAACCAGTATATTTTGGGAA+TGG - chr5_2:56183477-56183496 Msa0777320:intron 35.0%
!! TATATTTTGGGAATGGCAGA+AGG - chr5_2:56183484-56183503 Msa0777320:intron 35.0%
! AGTGCATAGATAGCACTTTT+AGG + chr5_2:56183564-56183583 None:intergenic 35.0%
! CACTCCTTAAAAAGTCCTTT+TGG + chr5_2:56183618-56183637 None:intergenic 35.0%
!! AAAGGACTTTTTAAGGAGTG+TGG - chr5_2:56183618-56183637 Msa0777320:intron 35.0%
! CAGTGAAAGTGCAAGTAAAA+AGG + chr5_2:56183895-56183914 None:intergenic 35.0%
!!! TGTCTTTTCTGTTGGTTTCT+AGG - chr5_2:56183970-56183989 Msa0777320:intron 35.0%
GATCAGTAGCATAACTCATT+TGG - chr5_2:56184027-56184046 Msa0777320:intron 35.0%
! GTTTCTGTTATTTGCGCAAA+TGG - chr5_2:56184087-56184106 Msa0777320:intron 35.0%
TTGAAGCTTGGAATTACTGA+TGG - chr5_2:56184220-56184239 Msa0777320:intron 35.0%
GCAACACTCTTCTATCTATA+TGG - chr5_2:56184357-56184376 Msa0777320:intron 35.0%
ATGCTATTAACGGCTTATTG+TGG - chr5_2:56184482-56184501 Msa0777320:intron 35.0%
TTATTGTGGTTCATGATGAC+AGG - chr5_2:56184496-56184515 Msa0777320:intron 35.0%
! ATAATGGGACAAGAAAGGAA+TGG - chr5_2:56184774-56184793 Msa0777320:intron 35.0%
CTTGAGAAAACTGAAGTCAT+TGG - chr5_2:56184875-56184894 Msa0777320:intron 35.0%
TTTACACTCAACTCACTGAA+TGG + chr5_2:56185011-56185030 None:intergenic 35.0%
! CAGTGAGTTGAGTGTAAAAT+AGG - chr5_2:56185013-56185032 Msa0777320:intron 35.0%
GTAAGTCACTATTTCCATGA+CGG + chr5_2:56185114-56185133 None:intergenic 35.0%
ATGACCGTCATTTAAGAATG+AGG - chr5_2:56185201-56185220 Msa0777320:intron 35.0%
TGACCGTCATTTAAGAATGA+GGG - chr5_2:56185202-56185221 Msa0777320:intron 35.0%
TCACATGGCTGTAATATAGT+CGG + chr5_2:56185580-56185599 None:intergenic 35.0%
ATCTCAATGATGCATTCACA+TGG + chr5_2:56185595-56185614 None:intergenic 35.0%
! GAAGCAGTAAAGGTACATAT+AGG - chr5_2:56185676-56185695 Msa0777320:intron 35.0%
!! ACACATTCATATGCTGCTTT+AGG - chr5_2:56185769-56185788 Msa0777320:CDS 35.0%
! GCTTTAGCTTACTTAAGATC+AGG - chr5_2:56185791-56185810 Msa0777320:CDS 35.0%
! TGTTGATGGGGATAACTTAA+TGG - chr5_2:56185840-56185859 Msa0777320:CDS 35.0%
AAGAAACAGCTGCATAAACT+TGG + chr5_2:56185930-56185949 None:intergenic 35.0%
!! GCTGTTTCTTATATCTGCAT+TGG - chr5_2:56185940-56185959 Msa0777320:CDS 35.0%
TGATGCTGAATCTAATTCAC+AGG - chr5_2:56185963-56185982 Msa0777320:CDS 35.0%
AGTAGCGCCAATTAAATTAG+AGG + chr5_2:56185999-56186018 None:intergenic 35.0%
!!! CTACTTACTTTTTCTAACGC+AGG - chr5_2:56186014-56186033 Msa0777320:CDS 35.0%
AACAAGATCTACAAGAAGCA+AGG - chr5_2:56186193-56186212 Msa0777320:intron 35.0%
! ATGCCAGTTCAATAGTTTTC+TGG + chr5_2:56186785-56186804 None:intergenic 35.0%
TATTGAACTGGCATCATATC+TGG - chr5_2:56186791-56186810 Msa0777320:intron 35.0%
GCCAGATTTAGTATTTGACT+GGG + chr5_2:56186862-56186881 None:intergenic 35.0%
AGCCAGATTTAGTATTTGAC+TGG + chr5_2:56186863-56186882 None:intergenic 35.0%
ACCAGCCAAATCATTTAAAC+CGG - chr5_2:56186887-56186906 Msa0777320:intron 35.0%
! TTCAGCCGGTTTAAATGATT+TGG + chr5_2:56186895-56186914 None:intergenic 35.0%
! TGTTGTTTGGTGAAATGGAA+AGG + chr5_2:56186927-56186946 None:intergenic 35.0%
!! AAATTGGTGCACTTGTTGTT+TGG + chr5_2:56186940-56186959 None:intergenic 35.0%
GCAGTTGACACATACTTATT+TGG - chr5_2:56187292-56187311 Msa0777320:intron 35.0%
TCCCAATATTTAACAACCCT+TGG - chr5_2:56187332-56187351 Msa0777320:intron 35.0%
GCCAAGGGTTGTTAAATATT+GGG + chr5_2:56187336-56187355 None:intergenic 35.0%
TGCCAAGGGTTGTTAAATAT+TGG + chr5_2:56187337-56187356 None:intergenic 35.0%
AATGTGCCCAAGTTATAGTT+TGG - chr5_2:56187531-56187550 Msa0777320:intron 35.0%
ATGTGCCCAAGTTATAGTTT+GGG - chr5_2:56187532-56187551 Msa0777320:intron 35.0%
ACTGCAAGAAATGAAAGACA+CGG + chr5_2:56187606-56187625 None:intergenic 35.0%
! TCTTTTATCTCTGAACTGCA+TGG - chr5_2:56187688-56187707 Msa0777320:intron 35.0%
! CTTTTATCTCTGAACTGCAT+GGG - chr5_2:56187689-56187708 Msa0777320:intron 35.0%
TGTTTGAGTATTACTCTGCA+TGG - chr5_2:56187744-56187763 Msa0777320:intron 35.0%
GTGTAGATTTCCTGAATCAA+GGG + chr5_2:56187819-56187838 None:intergenic 35.0%
! TGGGGAAAACTATGTGTTTT+AGG + chr5_2:56187891-56187910 None:intergenic 35.0%
AAAAGGATTATCCTACGAGT+GGG + chr5_2:56187910-56187929 None:intergenic 35.0%
AAAAAGGATTATCCTACGAG+TGG + chr5_2:56187911-56187930 None:intergenic 35.0%
! ACTCGTAGGATAATCCTTTT+TGG - chr5_2:56187910-56187929 Msa0777320:intron 35.0%
! AATAGTTTAAAACAGGGGGA+GGG + chr5_2:56187940-56187959 None:intergenic 35.0%
! AAATAGTTTAAAACAGGGGG+AGG + chr5_2:56187941-56187960 None:intergenic 35.0%
CTTCCTTGATAAGATTAGCA+AGG + chr5_2:56188094-56188113 None:intergenic 35.0%
TATAGGTCTGTAGATTCTGT+AGG - chr5_2:56188182-56188201 Msa0777320:intron 35.0%
ATAGGTCTGTAGATTCTGTA+GGG - chr5_2:56188183-56188202 Msa0777320:intron 35.0%
GGAAACTTCAAATTCTTGTC+AGG + chr5_2:56188310-56188329 None:intergenic 35.0%
TTCACAAAACATTCCCTCTA+TGG + chr5_2:56188437-56188456 None:intergenic 35.0%
TCGCATAGAATCAAAAGTTG+AGG - chr5_2:56188615-56188634 Msa0777320:intron 35.0%
CGCATAGAATCAAAAGTTGA+GGG - chr5_2:56188616-56188635 Msa0777320:intron 35.0%
AGTTGAATGATAAGGCTAAG+TGG - chr5_2:56188735-56188754 Msa0777320:intron 35.0%
!!! AATCGCGATTTTAACTACCA+TGG + chr5_2:56188787-56188806 None:intergenic 35.0%
AGAAAACTGTAAGATCAAGC+GGG + chr5_2:56188821-56188840 None:intergenic 35.0%
! TTTTCTACGATTTGAGCCTA+TGG - chr5_2:56188835-56188854 Msa0777320:intron 35.0%
CTGTATAAATACTTGCCCAA+TGG + chr5_2:56188909-56188928 None:intergenic 35.0%
CATTGGGCAAGTATTTATAC+AGG - chr5_2:56188907-56188926 Msa0777320:intron 35.0%
AGGAGAAAGAGGAAATGAAT+TGG - chr5_2:56189090-56189109 Msa0777320:intron 35.0%
AGTTCCACAATTACATGAGT+TGG - chr5_2:56189311-56189330 Msa0777320:intron 35.0%
AGATTATTAACTCCCATGCT+TGG + chr5_2:56189360-56189379 None:intergenic 35.0%
!! AACTAGCATTGATGATGGAA+CGG + chr5_2:56189421-56189440 None:intergenic 35.0%
! CTAGTTGATATAGATGGTAG+TGG - chr5_2:56189435-56189454 Msa0777320:intron 35.0%
TTTCCTCATGGAAGTTAATC+CGG - chr5_2:56189489-56189508 Msa0777320:CDS 35.0%
ACTCATTAAGTTACATGAGC+AGG - chr5_2:56189660-56189679 Msa0777320:intron 35.0%
! ATAGTGGTGTAGGTTTTCTA+AGG - chr5_2:56189752-56189771 Msa0777320:CDS 35.0%
!! ACAAGGTAATGGAGTCAATG+GGG + chr5_2:56179385-56179404 None:intergenic 40.0%
AGAATGGAAGCAATAGCAGA+AGG - chr5_2:56179471-56179490 Msa0777320:three_prime_UTR 40.0%
AAGCAATAGCAGAAGGACTA+TGG - chr5_2:56179478-56179497 Msa0777320:three_prime_UTR 40.0%
AGCAATAGCAGAAGGACTAT+GGG - chr5_2:56179479-56179498 Msa0777320:three_prime_UTR 40.0%
! TTTCTCCTCGGTTTTCATGA+TGG + chr5_2:56179515-56179534 None:intergenic 40.0%
AAACCGAGGAGAAATAGCAA+AGG - chr5_2:56179521-56179540 Msa0777320:three_prime_UTR 40.0%
!!! CGAGTTTTGACTTCAACGAT+TGG + chr5_2:56179594-56179613 None:intergenic 40.0%
GGAATGATGAAGAAGGATTG+TGG + chr5_2:56179628-56179647 None:intergenic 40.0%
CGTTATGGGAATGATGAAGA+AGG + chr5_2:56179635-56179654 None:intergenic 40.0%
TGATACTAACACAACGTTCG+AGG + chr5_2:56179677-56179696 None:intergenic 40.0%
AGCTATTCAACCTCAGAAAC+AGG - chr5_2:56179855-56179874 Msa0777320:three_prime_UTR 40.0%
TATATCGTCGTTGCATGTAG+CGG - chr5_2:56179981-56180000 Msa0777320:CDS 40.0%
!! ACAAAGTTGGTTTGCTGGTT+AGG - chr5_2:56180006-56180025 Msa0777320:CDS 40.0%
TAGGATGAGTAGTTAACGAG+TGG - chr5_2:56180025-56180044 Msa0777320:CDS 40.0%
AGTTAACGAGTGGAGTGATA+AGG - chr5_2:56180035-56180054 Msa0777320:CDS 40.0%
!! GAAAATGTCAAGGGCTAGTT+TGG - chr5_2:56180251-56180270 Msa0777320:CDS 40.0%
GGTTAATACAGTTTCAGTCG+TGG - chr5_2:56180414-56180433 Msa0777320:intron 40.0%
AATATCTCCGTCTTTGAGCA+AGG + chr5_2:56180617-56180636 None:intergenic 40.0%
AATGACCAAAACCGCTATCT+AGG + chr5_2:56180681-56180700 None:intergenic 40.0%
AACAAGATGAAGACCTATCG+GGG + chr5_2:56180712-56180731 None:intergenic 40.0%
CAACAAGATGAAGACCTATC+GGG + chr5_2:56180713-56180732 None:intergenic 40.0%
AAAGCTATTGTCCGCAAATG+AGG + chr5_2:56181080-56181099 None:intergenic 40.0%
!! TTTGCGGACAATAGCTTTGT+AGG - chr5_2:56181082-56181101 Msa0777320:intron 40.0%
!!! TCTGGTCTAGCTTTTGGAAA+GGG - chr5_2:56181199-56181218 Msa0777320:intron 40.0%
! AGTTCTTTTAGACTTGGAGG+AGG + chr5_2:56181465-56181484 None:intergenic 40.0%
CTAAGGGTTTAAAGAATGGG+AGG - chr5_2:56181534-56181553 Msa0777320:intron 40.0%
AGAGAGAGTGAATGTTAGGA+AGG + chr5_2:56181626-56181645 None:intergenic 40.0%
GTTAGTTAACTAGAGAGGCA+GGG + chr5_2:56181659-56181678 None:intergenic 40.0%
AGTTAGTTAACTAGAGAGGC+AGG + chr5_2:56181660-56181679 None:intergenic 40.0%
GCAGACCTCAGTTAAAAGTA+TGG + chr5_2:56181690-56181709 None:intergenic 40.0%
CAGTAGCTGTAGCATGTATA+TGG - chr5_2:56181829-56181848 Msa0777320:intron 40.0%
TGTCAATTGAAGGAGACTAC+CGG - chr5_2:56182382-56182401 Msa0777320:intron 40.0%
TCAATATCCGCCTTAGAATG+TGG - chr5_2:56182408-56182427 Msa0777320:intron 40.0%
ACAGGCATATCCACATTCTA+AGG + chr5_2:56182421-56182440 None:intergenic 40.0%
CATTACTAACCTGCAACTCT+GGG + chr5_2:56182461-56182480 None:intergenic 40.0%
TCATTACTAACCTGCAACTC+TGG + chr5_2:56182462-56182481 None:intergenic 40.0%
AGGAATTACAGACAGTCAGA+TGG + chr5_2:56182867-56182886 None:intergenic 40.0%
ATGAAGTGGCAAAGAACATC+TGG + chr5_2:56182907-56182926 None:intergenic 40.0%
TATCATCATCCCATTGCATG+AGG + chr5_2:56182943-56182962 None:intergenic 40.0%
AGGATTGTGTGGAAGCAAAA+AGG + chr5_2:56183151-56183170 None:intergenic 40.0%
TGCACATATTCTATCGTACG+CGG - chr5_2:56183214-56183233 Msa0777320:CDS 40.0%
TGATCTTCACTACAGGGAAA+GGG - chr5_2:56183371-56183390 Msa0777320:intron 40.0%
GAACAGCTGAGAAACATGAA+TGG - chr5_2:56183426-56183445 Msa0777320:CDS 40.0%
CTGCCATTCCCAAAATATAC+TGG + chr5_2:56183483-56183502 None:intergenic 40.0%
GGTTGGACATAGAGAATATC+TGG + chr5_2:56183938-56183957 None:intergenic 40.0%
CCAACAGAAAAGACATTCCA+CGG + chr5_2:56183965-56183984 None:intergenic 40.0%
GCAGATGAGTTATTGAAGCT+TGG - chr5_2:56184208-56184227 Msa0777320:intron 40.0%
CACTCTTCTATCTATATGGC+TGG - chr5_2:56184361-56184380 Msa0777320:intron 40.0%
GTGAAAGAGATAGAGAGAGA+TGG - chr5_2:56184723-56184742 Msa0777320:intron 40.0%
! GCAGAATAATGGGACAAGAA+AGG - chr5_2:56184769-56184788 Msa0777320:intron 40.0%
! ATGTGCTGTTCACCAAAGAT+GGG - chr5_2:56184918-56184937 Msa0777320:CDS 40.0%
ATCTCTCAATTGCCCATCTT+TGG + chr5_2:56184933-56184952 None:intergenic 40.0%
TGAGAGATGATAGAGATGTG+TGG - chr5_2:56184945-56184964 Msa0777320:CDS 40.0%
GAGAGATGATAGAGATGTGT+GGG - chr5_2:56184946-56184965 Msa0777320:CDS 40.0%
! AGAGAAGTGCAAGTGATAGA+TGG - chr5_2:56184980-56184999 Msa0777320:CDS 40.0%
! ATGGCTTCAAAGTGGCATTT+TGG - chr5_2:56185153-56185172 Msa0777320:intron 40.0%
AAATGACGGTCATGAGAGAA+TGG + chr5_2:56185194-56185213 None:intergenic 40.0%
CCACCCTCATTCTTAAATGA+CGG + chr5_2:56185208-56185227 None:intergenic 40.0%
CGTCATTTAAGAATGAGGGT+GGG - chr5_2:56185206-56185225 Msa0777320:intron 40.0%
! GCATTCTGTGCAAGTTTTCA+GGG - chr5_2:56185403-56185422 Msa0777320:intron 40.0%
TGGCATTCTGTGCAAATTTC+AGG - chr5_2:56185519-56185538 Msa0777320:intron 40.0%
TCTGTGCAAATTTCAGGCTT+TGG - chr5_2:56185525-56185544 Msa0777320:intron 40.0%
TGCATCATTGAGATGCTAAG+AGG - chr5_2:56185601-56185620 Msa0777320:intron 40.0%
AGCCAACAGAATGAGCATAT+TGG + chr5_2:56185627-56185646 None:intergenic 40.0%
!!! CTTACTTTTTCTAACGCAGG+TGG - chr5_2:56186017-56186036 Msa0777320:CDS 40.0%
! TGCAGGCACTTGATTTGATT+GGG - chr5_2:56186085-56186104 Msa0777320:CDS 40.0%
TGGGCCAGTTTATGAAGTAA+TGG - chr5_2:56186104-56186123 Msa0777320:CDS 40.0%
ACTGGTGTTCTCTTTGCTTA+CGG - chr5_2:56186153-56186172 Msa0777320:CDS 40.0%
! CCAGTTCAATAGTTTTCTGG+TGG + chr5_2:56186782-56186801 None:intergenic 40.0%
CCACCAGAAAACTATTGAAC+TGG - chr5_2:56186779-56186798 Msa0777320:intron 40.0%
GCCCAGTCAAATACTAAATC+TGG - chr5_2:56186858-56186877 Msa0777320:intron 40.0%
!! GCACTTGTTGTTTGGTGAAA+TGG + chr5_2:56186932-56186951 None:intergenic 40.0%
ATGCACTGTATAGCACGTTA+GGG + chr5_2:56186969-56186988 None:intergenic 40.0%
GAGAGTCAATAGTTAGACTG+GGG + chr5_2:56187120-56187139 None:intergenic 40.0%
CGAGAGTCAATAGTTAGACT+GGG + chr5_2:56187121-56187140 None:intergenic 40.0%
TCGAGAGTCAATAGTTAGAC+TGG + chr5_2:56187122-56187141 None:intergenic 40.0%
AAATGCAACTTGGAGGAAAG+AGG + chr5_2:56187238-56187257 None:intergenic 40.0%
TTGTAGAATTCGTTTGGCGA+AGG - chr5_2:56187265-56187284 Msa0777320:intron 40.0%
TGTAGAATTCGTTTGGCGAA+GGG - chr5_2:56187266-56187285 Msa0777320:intron 40.0%
TTTAACAACCCTTGGCAGTT+TGG - chr5_2:56187340-56187359 Msa0777320:intron 40.0%
TACAGTGTCACGCAATACAA+TGG + chr5_2:56187366-56187385 None:intergenic 40.0%
! TTTGAGATCGTCTTTGACCT+TGG - chr5_2:56187400-56187419 Msa0777320:intron 40.0%
ATCACAAAGCTTCTTTGCCA+AGG + chr5_2:56187420-56187439 None:intergenic 40.0%
TGATGTTCCTTCTCAAGTCT+GGG - chr5_2:56187436-56187455 Msa0777320:intron 40.0%
! TCTTGCAGTTTTCTCTGTTC+TGG - chr5_2:56187617-56187636 Msa0777320:intron 40.0%
!!! TTTTCTCTGTTCTGGTTTGC+TGG - chr5_2:56187625-56187644 Msa0777320:intron 40.0%
TTTCCTGAATCAAGGGACTA+GGG + chr5_2:56187812-56187831 None:intergenic 40.0%
ATTTCCTGAATCAAGGGACT+AGG + chr5_2:56187813-56187832 None:intergenic 40.0%
CGTGTAGATTTCCTGAATCA+AGG + chr5_2:56187820-56187839 None:intergenic 40.0%
AAAGGATTATCCTACGAGTG+GGG + chr5_2:56187909-56187928 None:intergenic 40.0%
! ATAGTTTAAAACAGGGGGAG+GGG + chr5_2:56187939-56187958 None:intergenic 40.0%
!! CAGAGATTAACGAGGTATTG+AGG + chr5_2:56188007-56188026 None:intergenic 40.0%
AAATGAGCACAAGGAGAGAA+AGG + chr5_2:56188067-56188086 None:intergenic 40.0%
CAAGGTTAGAAATGAGCACA+AGG + chr5_2:56188076-56188095 None:intergenic 40.0%
GCTAATCTTATCAAGGAAGC+AGG - chr5_2:56188095-56188114 Msa0777320:intron 40.0%
GATGAAACCCTGACTTTGAA+GGG + chr5_2:56188123-56188142 None:intergenic 40.0%
TGATGAAACCCTGACTTTGA+AGG + chr5_2:56188124-56188143 None:intergenic 40.0%
TACAGGACTAACTCGGTAAT+TGG - chr5_2:56188924-56188943 Msa0777320:intron 40.0%
ACACATTAGCTGTCAGATAG+TGG - chr5_2:56188950-56188969 Msa0777320:intron 40.0%
AATCTGAAGACCTGCATAAG+AGG - chr5_2:56189137-56189156 Msa0777320:intron 40.0%
!! ACTAGCATTGATGATGGAAC+GGG + chr5_2:56189420-56189439 None:intergenic 40.0%
ATACCGGATTAACTTCCATG+AGG + chr5_2:56189495-56189514 None:intergenic 40.0%
GTTGAAGAGTTTCACCAGAA+AGG - chr5_2:56189563-56189582 Msa0777320:CDS 40.0%
AGGTAAGATGGAAACCTTTC+TGG + chr5_2:56189580-56189599 None:intergenic 40.0%
AAGGTTTCCATCTTACCTCA+AGG - chr5_2:56189582-56189601 Msa0777320:intron 40.0%
CTAGGACAGGAAAAGGATAT+AGG + chr5_2:56189980-56189999 None:intergenic 40.0%
CAGTAAACTAGGACAGGAAA+AGG + chr5_2:56189987-56190006 None:intergenic 40.0%
! GTAATGGAGTCAATGGGGAA+GGG + chr5_2:56179380-56179399 None:intergenic 45.0%
GCAATAGCAGAAGGACTATG+GGG - chr5_2:56179480-56179499 Msa0777320:three_prime_UTR 45.0%
!! CTGCCTTTGCTATTTCTCCT+CGG + chr5_2:56179527-56179546 None:intergenic 45.0%
CGATTGGGAAGAAGGAAACT+TGG + chr5_2:56179578-56179597 None:intergenic 45.0%
GACTTCAACGATTGGGAAGA+AGG + chr5_2:56179586-56179605 None:intergenic 45.0%
! CTTGATCTTGCTGCTTCTTC+TGG - chr5_2:56179892-56179911 Msa0777320:CDS 45.0%
! CTTGCTGCTTCTTCTGGAAA+TGG - chr5_2:56179898-56179917 Msa0777320:CDS 45.0%
!! GCATGTAGCGGATACAAAGT+TGG - chr5_2:56179993-56180012 Msa0777320:CDS 45.0%
!! CGGATACAAAGTTGGTTTGC+TGG - chr5_2:56180001-56180020 Msa0777320:CDS 45.0%
AGGAAGTCGAGTGTTAGATC+TGG - chr5_2:56180055-56180074 Msa0777320:CDS 45.0%
TTAACATTATGCTGGGCGTG+AGG + chr5_2:56180083-56180102 None:intergenic 45.0%
ACTGAAGGCAAATTAGTCCC+CGG - chr5_2:56180192-56180211 Msa0777320:CDS 45.0%
TCCCTCTGTTATAATGAGCC+GGG + chr5_2:56180213-56180232 None:intergenic 45.0%
GTCCCTCTGTTATAATGAGC+CGG + chr5_2:56180214-56180233 None:intergenic 45.0%
! GGTCCCTGACAATTTTCTCA+CGG + chr5_2:56180306-56180325 None:intergenic 45.0%
!!! AGCATGTCTGGTCTAGCTTT+TGG - chr5_2:56181193-56181212 Msa0777320:intron 45.0%
!!! GTCTGGTCTAGCTTTTGGAA+AGG - chr5_2:56181198-56181217 Msa0777320:intron 45.0%
!!! CTGGTCTAGCTTTTGGAAAG+GGG - chr5_2:56181200-56181219 Msa0777320:intron 45.0%
!! GCTTTTGGAAAGGGGTCAAA+CGG - chr5_2:56181208-56181227 Msa0777320:intron 45.0%
!! CTTTTGGAAAGGGGTCAAAC+GGG - chr5_2:56181209-56181228 Msa0777320:intron 45.0%
ACCCTTAGCTCAAACCAGTT+GGG + chr5_2:56181522-56181541 None:intergenic 45.0%
AACCCTTAGCTCAAACCAGT+TGG + chr5_2:56181523-56181542 None:intergenic 45.0%
CTTCACCAGAGTTTGAACTC+AGG + chr5_2:56181561-56181580 None:intergenic 45.0%
CTGAGTTCAAACTCTGGTGA+AGG - chr5_2:56181559-56181578 Msa0777320:intron 45.0%
GCAGAGAGAGAGTGAATGTT+AGG + chr5_2:56181630-56181649 None:intergenic 45.0%
GTCAATTGAAGGAGACTACC+GGG - chr5_2:56182383-56182402 Msa0777320:intron 45.0%
TCAATTGAAGGAGACTACCG+GGG - chr5_2:56182384-56182403 Msa0777320:intron 45.0%
! GGCATATCCACATTCTAAGG+CGG + chr5_2:56182418-56182437 None:intergenic 45.0%
GTAGCATACTTCAGTAGCAC+AGG + chr5_2:56182439-56182458 None:intergenic 45.0%
AAGAGCAAAGAAGGGAGCAA+AGG + chr5_2:56182507-56182526 None:intergenic 45.0%
CGGATGCAAAGAGCAAAGAA+GGG + chr5_2:56182515-56182534 None:intergenic 45.0%
TCGGATGCAAAGAGCAAAGA+AGG + chr5_2:56182516-56182535 None:intergenic 45.0%
GTGGGCATGCAATAATGAAG+TGG + chr5_2:56182921-56182940 None:intergenic 45.0%
ATCATCCCATTGCATGAGGT+GGG + chr5_2:56182939-56182958 None:intergenic 45.0%
GCAAACATGCACATGTCTGT+GGG + chr5_2:56183081-56183100 None:intergenic 45.0%
TGCAAACATGCACATGTCTG+TGG + chr5_2:56183082-56183101 None:intergenic 45.0%
! TGTTGTCTCTGAGGATTGTG+TGG + chr5_2:56183162-56183181 None:intergenic 45.0%
GCACATATTCTATCGTACGC+GGG - chr5_2:56183215-56183234 Msa0777320:CDS 45.0%
AGCATCCAGATTGTCCACAT+GGG + chr5_2:56183265-56183284 None:intergenic 45.0%
ACACATGCAAGAGCTAGTGA+AGG - chr5_2:56183314-56183333 Msa0777320:intron 45.0%
CAGGTCTGATCTTCACTACA+GGG - chr5_2:56183365-56183384 Msa0777320:intron 45.0%
CTGATCTTCACTACAGGGAA+AGG - chr5_2:56183370-56183389 Msa0777320:intron 45.0%
ATGGGTTCAGTTCAATTGGG+AGG - chr5_2:56183445-56183464 Msa0777320:CDS 45.0%
TGGGTTCAGTTCAATTGGGA+GGG - chr5_2:56183446-56183465 Msa0777320:CDS 45.0%
TTAGCACCACCTCCTATTGA+TGG - chr5_2:56183528-56183547 Msa0777320:intron 45.0%
TAGCACCACCTCCTATTGAT+GGG - chr5_2:56183529-56183548 Msa0777320:intron 45.0%
! GCGCCCAAAAGGACTTTTTA+AGG - chr5_2:56183611-56183630 Msa0777320:intron 45.0%
TCGGGGATGCGTATAATTCA+AGG - chr5_2:56183654-56183673 Msa0777320:intron 45.0%
TGGCAAGTAGTGACGATGAT+AGG + chr5_2:56183918-56183937 None:intergenic 45.0%
! CCGTGGAATGTCTTTTCTGT+TGG - chr5_2:56183962-56183981 Msa0777320:intron 45.0%
! ATTGCTGTTGTGCATTGCTG+TGG - chr5_2:56184125-56184144 Msa0777320:intron 45.0%
CTAAAGCGGCAAGAATTGCT+CGG + chr5_2:56184154-56184173 None:intergenic 45.0%
! GGAATTACTGATGGTGTCAG+AGG - chr5_2:56184229-56184248 Msa0777320:intron 45.0%
ATGGGACAAGAAAGGAATGG+TGG - chr5_2:56184777-56184796 Msa0777320:intron 45.0%
ATTGGCGATAGTTTACGCAC+TGG - chr5_2:56184893-56184912 Msa0777320:intron 45.0%
! GATGTGCTGTTCACCAAAGA+TGG - chr5_2:56184917-56184936 Msa0777320:CDS 45.0%
!!! TGATGCTTTTTCTGCCGTCA+TGG - chr5_2:56185097-56185116 Msa0777320:intron 45.0%
ATGTAAAAGCCACCCCAACA+TGG - chr5_2:56185134-56185153 Msa0777320:CDS 45.0%
!! TGCCACTTTGAAGCCATGTT+GGG + chr5_2:56185150-56185169 None:intergenic 45.0%
!! ATGCCACTTTGAAGCCATGT+TGG + chr5_2:56185151-56185170 None:intergenic 45.0%
CCGTCATTTAAGAATGAGGG+TGG - chr5_2:56185205-56185224 Msa0777320:intron 45.0%
AAGCAAGCCACCTAATAAGG+TGG + chr5_2:56185291-56185310 None:intergenic 45.0%
CAGAAGCAAGCCACCTAATA+AGG + chr5_2:56185294-56185313 None:intergenic 45.0%
!! CTTATTAGGTGGCTTGCTTC+TGG - chr5_2:56185292-56185311 Msa0777320:intron 45.0%
! GGCATTCTGTGCAAGTTTTC+AGG - chr5_2:56185402-56185421 Msa0777320:intron 45.0%
GGCCAATATGCTCATTCTGT+TGG - chr5_2:56185622-56185641 Msa0777320:intron 45.0%
! CCTGCAGGCAAACTATGTTT+TGG + chr5_2:56186071-56186090 None:intergenic 45.0%
! CCAAAACATAGTTTGCCTGC+AGG - chr5_2:56186068-56186087 Msa0777320:CDS 45.0%
CAATCAAATCAAGTGCCTGC+AGG + chr5_2:56186086-56186105 None:intergenic 45.0%
! CTGCAGGCACTTGATTTGAT+TGG - chr5_2:56186084-56186103 Msa0777320:CDS 45.0%
GTAGGGGTTAGAGAGAAAAC+TGG - chr5_2:56186135-56186154 Msa0777320:CDS 45.0%
! TTCGATCAGGCTTTTCTGTC+TGG - chr5_2:56186243-56186262 Msa0777320:intron 45.0%
! TCGATCAGGCTTTTCTGTCT+GGG - chr5_2:56186244-56186263 Msa0777320:intron 45.0%
! GCCGGTTTAAATGATTTGGC+TGG + chr5_2:56186891-56186910 None:intergenic 45.0%
CACGTTAGGGGCAAACAAAT+TGG + chr5_2:56186956-56186975 None:intergenic 45.0%
TGCACTGTATAGCACGTTAG+GGG + chr5_2:56186968-56186987 None:intergenic 45.0%
CATGCACTGTATAGCACGTT+AGG + chr5_2:56186970-56186989 None:intergenic 45.0%
TACAATGGCCAAACTGCCAA+GGG + chr5_2:56187351-56187370 None:intergenic 45.0%
ATACAATGGCCAAACTGCCA+AGG + chr5_2:56187352-56187371 None:intergenic 45.0%
AGACGATCTCAAAATCTCCC+TGG + chr5_2:56187393-56187412 None:intergenic 45.0%
GTGATGTTCCTTCTCAAGTC+TGG - chr5_2:56187435-56187454 Msa0777320:intron 45.0%
GCAAGAAATGAAAGACACGG+TGG + chr5_2:56187603-56187622 None:intergenic 45.0%
TTCCTGAATCAAGGGACTAG+GGG + chr5_2:56187811-56187830 None:intergenic 45.0%
! ACATAGTTTTCCCCACTCGT+AGG - chr5_2:56187896-56187915 Msa0777320:intron 45.0%
ACAAGGAGAGAAAGGAACTG+GGG + chr5_2:56188059-56188078 None:intergenic 45.0%
CACAAGGAGAGAAAGGAACT+GGG + chr5_2:56188060-56188079 None:intergenic 45.0%
CATTAACTTCAGTGTCGCCA+TGG - chr5_2:56188767-56188786 Msa0777320:intron 45.0%
GCAACTTTGATAGACGAGCA+GGG - chr5_2:56188972-56188991 Msa0777320:intron 45.0%
GTGGTAGAAGACGTGGAAAA+CGG - chr5_2:56189454-56189473 Msa0777320:CDS 45.0%
ATACTTGACAGACAGCCTTG+AGG + chr5_2:56189600-56189619 None:intergenic 45.0%
GGATAGCTGATAGAACTCAC+TGG - chr5_2:56189681-56189700 Msa0777320:CDS 45.0%
GCATTGCAGTAAACTAGGAC+AGG + chr5_2:56189993-56190012 None:intergenic 45.0%
!!! ATTTTTTGTTAATTATATTT+TGG - chr5_2:56189248-56189267 Msa0777320:intron 5.0%
!! GGTAATGGAGTCAATGGGGA+AGG + chr5_2:56179381-56179400 None:intergenic 50.0%
GCAGACCATCATGAAAACCG+AGG - chr5_2:56179507-56179526 Msa0777320:three_prime_UTR 50.0%
TCCCCGGCTCATTATAACAG+AGG - chr5_2:56180208-56180227 Msa0777320:CDS 50.0%
CCCTCTGTTATAATGAGCCG+GGG + chr5_2:56180212-56180231 None:intergenic 50.0%
CCCCGGCTCATTATAACAGA+GGG - chr5_2:56180209-56180228 Msa0777320:CDS 50.0%
TGGGCCGTGAGAAAATTGTC+AGG - chr5_2:56180299-56180318 Msa0777320:intron 50.0%
GGGCCGTGAGAAAATTGTCA+GGG - chr5_2:56180300-56180319 Msa0777320:intron 50.0%
AGTATTGCGGTTGCAACCAC+AGG - chr5_2:56180976-56180995 Msa0777320:intron 50.0%
!! AGCCCAACTGGTTTGAGCTA+AGG - chr5_2:56181517-56181536 Msa0777320:intron 50.0%
!! GCCCAACTGGTTTGAGCTAA+GGG - chr5_2:56181518-56181537 Msa0777320:intron 50.0%
GAGGACCTGAGTTCAAACTC+TGG - chr5_2:56181553-56181572 Msa0777320:intron 50.0%
GTTAACTAGAGAGGCAGGGA+GGG + chr5_2:56181655-56181674 None:intergenic 50.0%
AGTTAACTAGAGAGGCAGGG+AGG + chr5_2:56181656-56181675 None:intergenic 50.0%
CTAAGGCGGATATTGAACCC+CGG + chr5_2:56182404-56182423 None:intergenic 50.0%
AGTATGCTACCCAGAGTTGC+AGG - chr5_2:56182449-56182468 Msa0777320:intron 50.0%
CATCATCCCATTGCATGAGG+TGG + chr5_2:56182940-56182959 None:intergenic 50.0%
GCATCCAGATTGTCCACATG+GGG + chr5_2:56183264-56183283 None:intergenic 50.0%
CAGCATCCAGATTGTCCACA+TGG + chr5_2:56183266-56183285 None:intergenic 50.0%
ACAATCTGGATGCTGCTGTG+AGG - chr5_2:56183271-56183290 Msa0777320:intron 50.0%
CAATCTGGATGCTGCTGTGA+GGG - chr5_2:56183272-56183291 Msa0777320:intron 50.0%
CCTGTAGTGAAGATCAGACC+TGG + chr5_2:56183367-56183386 None:intergenic 50.0%
CCAGGTCTGATCTTCACTAC+AGG - chr5_2:56183364-56183383 Msa0777320:intron 50.0%
AGCACCACCTCCTATTGATG+GGG - chr5_2:56183530-56183549 Msa0777320:intron 50.0%
CATTCCCCATCAATAGGAGG+TGG + chr5_2:56183537-56183556 None:intergenic 50.0%
CACCTCCTATTGATGGGGAA+TGG - chr5_2:56183535-56183554 Msa0777320:intron 50.0%
AGCCATTCCCCATCAATAGG+AGG + chr5_2:56183540-56183559 None:intergenic 50.0%
GGAAGCCATTCCCCATCAAT+AGG + chr5_2:56183543-56183562 None:intergenic 50.0%
GTTGTATTTGGGCGCCCAAA+AGG - chr5_2:56183600-56183619 Msa0777320:intron 50.0%
! GTGTGGAAAGCGCATACAGT+CGG - chr5_2:56183635-56183654 Msa0777320:intron 50.0%
! TGTGGAAAGCGCATACAGTC+GGG - chr5_2:56183636-56183655 Msa0777320:intron 50.0%
GAAAAGACATTCCACGGCTG+TGG + chr5_2:56183959-56183978 None:intergenic 50.0%
TTCTGCTCGTGTGAGCTCTA+AGG + chr5_2:56184431-56184450 None:intergenic 50.0%
GATAGAGATGTGTGGGTGAG+AGG - chr5_2:56184953-56184972 Msa0777320:CDS 50.0%
!! ACTTTGAAGCCATGTTGGGG+TGG + chr5_2:56185146-56185165 None:intergenic 50.0%
ACCCCAACATGGCTTCAAAG+TGG - chr5_2:56185145-56185164 Msa0777320:intron 50.0%
!! GCCACTTTGAAGCCATGTTG+GGG + chr5_2:56185149-56185168 None:intergenic 50.0%
CGTGTCTGAGTGAAGAAGAC+TGG - chr5_2:56186688-56186707 Msa0777320:intron 50.0%
TCTGGTGGAACTAGACAGTC+TGG + chr5_2:56186767-56186786 None:intergenic 50.0%
!!! TGGGTGCTGACTGTTTTGAC+AGG - chr5_2:56187455-56187474 Msa0777320:intron 50.0%
AAGGAGAGAAAGGAACTGGG+GGG + chr5_2:56188057-56188076 None:intergenic 50.0%
CAAGGAGAGAAAGGAACTGG+GGG + chr5_2:56188058-56188077 None:intergenic 50.0%
GCACAAGGAGAGAAAGGAAC+TGG + chr5_2:56188061-56188080 None:intergenic 50.0%
AGCAGGTTCCCTTCAAAGTC+AGG - chr5_2:56188112-56188131 Msa0777320:intron 50.0%
GCAGGTTCCCTTCAAAGTCA+GGG - chr5_2:56188113-56188132 Msa0777320:intron 50.0%
AGTGAGGAGTTTGACAGCCA+TGG + chr5_2:56188501-56188520 None:intergenic 50.0%
GGCAACTTTGATAGACGAGC+AGG - chr5_2:56188971-56188990 Msa0777320:intron 50.0%
CTTTGATAGACGAGCAGGGA+TGG - chr5_2:56188976-56188995 Msa0777320:intron 50.0%
TGAAGACCTGCATAAGAGGC+TGG - chr5_2:56189141-56189160 Msa0777320:intron 50.0%
!! GATGGTAGTGGTAGAAGACG+TGG - chr5_2:56189447-56189466 Msa0777320:CDS 50.0%
!! GATTGCTCTAAGGTGCAAGC+AGG - chr5_2:56189541-56189560 Msa0777320:CDS 50.0%
CAGACAGCCTTGAGGTAAGA+TGG + chr5_2:56189592-56189611 None:intergenic 50.0%
TTATGCCGCGGCCTAGATAG+CGG - chr5_2:56180667-56180686 Msa0777320:intron 55.0%
CAAAACCGCTATCTAGGCCG+CGG + chr5_2:56180675-56180694 None:intergenic 55.0%
TGAGAGATGGGTAGCCCAAC+TGG - chr5_2:56181505-56181524 Msa0777320:intron 55.0%
TGCATGCCCACCTCATGCAA+TGG - chr5_2:56182930-56182949 Msa0777320:intron 55.0%
GCATGCCCACCTCATGCAAT+GGG - chr5_2:56182931-56182950 Msa0777320:intron 55.0%
!! CCAGGGCATTGTTGTCTCTG+AGG + chr5_2:56183171-56183190 None:intergenic 55.0%
CCTCAGAGACAACAATGCCC+TGG - chr5_2:56183168-56183187 Msa0777320:CDS 55.0%
CAAGAATGCTGCACCCCATG+TGG - chr5_2:56183248-56183267 Msa0777320:CDS 55.0%
TGCACCCCATGTGGACAATC+TGG - chr5_2:56183257-56183276 Msa0777320:CDS 55.0%
CTGCTGTGAGGGCTGAAAAG+AGG - chr5_2:56183283-56183302 Msa0777320:intron 55.0%
GGGAATGGCAGAAGGACACT+AGG - chr5_2:56183492-56183511 Msa0777320:intron 55.0%
! GTGGAAAGCGCATACAGTCG+GGG - chr5_2:56183637-56183656 Msa0777320:intron 55.0%
TCTATGTCCAACCACAGCCG+TGG - chr5_2:56183945-56183964 Msa0777320:intron 55.0%
AGACATTCCACGGCTGTGGT+TGG + chr5_2:56183955-56183974 None:intergenic 55.0%
AGAATACGCTGAAGCGCAGC+AGG - chr5_2:56184447-56184466 Msa0777320:intron 55.0%
TCTAACGCAGGTGGATCCCA+TGG - chr5_2:56186026-56186045 Msa0777320:CDS 55.0%
CTAACGCAGGTGGATCCCAT+GGG - chr5_2:56186027-56186046 Msa0777320:CDS 55.0%
TGCGTGACACTGTACAAGCC+AGG - chr5_2:56187372-56187391 Msa0777320:intron 55.0%
GCGTGACACTGTACAAGCCA+GGG - chr5_2:56187373-56187392 Msa0777320:intron 55.0%
GTCAGCACCCAGACTTGAGA+AGG + chr5_2:56187446-56187465 None:intergenic 55.0%
CTCCCCTAGTCCCTTGATTC+AGG - chr5_2:56187806-56187825 Msa0777320:intron 55.0%
AGGGGGAGGGGTTACCAAAA+AGG + chr5_2:56187927-56187946 None:intergenic 55.0%
GATAGACGAGCAGGGATGGA+TGG - chr5_2:56188980-56188999 Msa0777320:intron 55.0%
CATCAGCCAGCCTCTTATGC+AGG + chr5_2:56189150-56189169 None:intergenic 55.0%
TGCAATGGCAGGACCAAGCA+TGG - chr5_2:56189344-56189363 Msa0777320:intron 55.0%
GCAATGGCAGGACCAAGCAT+GGG - chr5_2:56189345-56189364 Msa0777320:intron 55.0%
GCTGGCAGGCCAATAGATTC+TGG + chr5_2:56189390-56189409 None:intergenic 55.0%
!! CGCGGCCTAGATAGCGGTTT+TGG - chr5_2:56180673-56180692 Msa0777320:intron 60.0%
AACTAGAGAGGCAGGGAGGG+AGG + chr5_2:56181652-56181671 None:intergenic 60.0%
TACGCTGAAGCGCAGCAGGT+TGG - chr5_2:56184451-56184470 Msa0777320:intron 60.0%
GATGGAACGGGTGCTTGTGC+TGG + chr5_2:56189408-56189427 None:intergenic 60.0%
! GAACGGGTGCTTGTGCTGGC+AGG + chr5_2:56189404-56189423 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 56179340 56190027 56179340 ID=Msa0777320;Name=Msa0777320
chr5_2 mRNA 56179340 56190027 56179340 ID=Msa0777320-mRNA-1;Parent=Msa0777320;Name=Msa0777320-mRNA-1;_AED=0.09;_eAED=0.09;_QI=20|1|1|1|0.91|1|13|542|765
chr5_2 exon 56179340 56180076 56179340 ID=Msa0777320-mRNA-1:exon:16651;Parent=Msa0777320-mRNA-1
chr5_2 exon 56180169 56180293 56180169 ID=Msa0777320-mRNA-1:exon:16650;Parent=Msa0777320-mRNA-1
chr5_2 exon 56181891 56182096 56181891 ID=Msa0777320-mRNA-1:exon:16649;Parent=Msa0777320-mRNA-1
chr5_2 exon 56183153 56183277 56183153 ID=Msa0777320-mRNA-1:exon:16648;Parent=Msa0777320-mRNA-1
chr5_2 exon 56183383 56183472 56183383 ID=Msa0777320-mRNA-1:exon:16647;Parent=Msa0777320-mRNA-1
chr5_2 exon 56183680 56183826 56183680 ID=Msa0777320-mRNA-1:exon:16646;Parent=Msa0777320-mRNA-1
chr5_2 exon 56184899 56185020 56184899 ID=Msa0777320-mRNA-1:exon:16645;Parent=Msa0777320-mRNA-1
chr5_2 exon 56185117 56185155 56185117 ID=Msa0777320-mRNA-1:exon:16644;Parent=Msa0777320-mRNA-1
chr5_2 exon 56185692 56186193 56185692 ID=Msa0777320-mRNA-1:exon:16643;Parent=Msa0777320-mRNA-1
chr5_2 exon 56186343 56186459 56186343 ID=Msa0777320-mRNA-1:exon:16642;Parent=Msa0777320-mRNA-1
chr5_2 exon 56186897 56187038 56186897 ID=Msa0777320-mRNA-1:exon:16641;Parent=Msa0777320-mRNA-1
chr5_2 exon 56189438 56189598 56189438 ID=Msa0777320-mRNA-1:exon:16640;Parent=Msa0777320-mRNA-1
chr5_2 exon 56189681 56190027 56189681 ID=Msa0777320-mRNA-1:exon:16639;Parent=Msa0777320-mRNA-1
chr5_2 five_prime_UTR 56190008 56190027 56190008 ID=Msa0777320-mRNA-1:five_prime_utr;Parent=Msa0777320-mRNA-1
chr5_2 CDS 56189681 56190007 56189681 ID=Msa0777320-mRNA-1:cds;Parent=Msa0777320-mRNA-1
chr5_2 CDS 56189438 56189598 56189438 ID=Msa0777320-mRNA-1:cds;Parent=Msa0777320-mRNA-1
chr5_2 CDS 56186897 56187038 56186897 ID=Msa0777320-mRNA-1:cds;Parent=Msa0777320-mRNA-1
chr5_2 CDS 56186343 56186459 56186343 ID=Msa0777320-mRNA-1:cds;Parent=Msa0777320-mRNA-1
chr5_2 CDS 56185692 56186193 56185692 ID=Msa0777320-mRNA-1:cds;Parent=Msa0777320-mRNA-1
chr5_2 CDS 56185117 56185155 56185117 ID=Msa0777320-mRNA-1:cds;Parent=Msa0777320-mRNA-1
chr5_2 CDS 56184899 56185020 56184899 ID=Msa0777320-mRNA-1:cds;Parent=Msa0777320-mRNA-1
chr5_2 CDS 56183680 56183826 56183680 ID=Msa0777320-mRNA-1:cds;Parent=Msa0777320-mRNA-1
chr5_2 CDS 56183383 56183472 56183383 ID=Msa0777320-mRNA-1:cds;Parent=Msa0777320-mRNA-1
chr5_2 CDS 56183153 56183277 56183153 ID=Msa0777320-mRNA-1:cds;Parent=Msa0777320-mRNA-1
chr5_2 CDS 56181891 56182096 56181891 ID=Msa0777320-mRNA-1:cds;Parent=Msa0777320-mRNA-1
chr5_2 CDS 56180169 56180293 56180169 ID=Msa0777320-mRNA-1:cds;Parent=Msa0777320-mRNA-1
chr5_2 CDS 56179882 56180076 56179882 ID=Msa0777320-mRNA-1:cds;Parent=Msa0777320-mRNA-1
chr5_2 three_prime_UTR 56179340 56179881 56179340 ID=Msa0777320-mRNA-1:three_prime_utr;Parent=Msa0777320-mRNA-1
Gene Sequence

>Msa0777320

ATGTGTGATTTTTCTTTCCCTTCCCCATTGACTCCATTACCTTGTTTCAAACAAAATAAAAAAAAACATAATCAGAAAACAAAAACAAAGAATCTAAGAAAGAAAGAAACAAGAATGGAAGCAATAGCAGAAGGACTATGGGGATTAGCAGACCATCATGAAAACCGAGGAGAAATAGCAAAGGCAGTAAAATGTCTAGAAGCAATCTGTCAAAGCCAAGTTTCCTTCTTCCCAATCGTTGAAGTCAAAACTCGTCTTCGTATCGCCACAATCCTTCTTCATCATTCCCATAACGCTAATCACGCTAAATCTCACCTCGAACGTTGTCAATTGTTGTTGAAGGCTATACCATCTTGTTTTGAGTTGAAGTGTAGAGCTTACAGTTTGTTGAGTCAGTGTTATCATCTTGTTGGAGCTATTCAACCTCAGAAACAGGTTTTGTTTAAGGGTCTTGATCTTGCTGCTTCTTCTGGAAATGGAAATAATGAGATTTCAACAAAGTTGTGGTCTTGCAACTTCAACTCACAGCTTGCAAATGCTTTGTCAATTGAAGGAGACTACCGGGGTTCAATATCCGCCTTAGAATGTGGATATGCCTGTGCTACTGAAGTATGCTACCCAGAGTTGCAGATGTTCTTTGCCACTTCATTATTGCATGCCCACCTCATGCAATGGGATGATGATAATTTGGTTGAGCAAGCTGTTAATAAATGCAATGAGATTTGGGAGTCAATTCAGCCAGATAAAAGACAACAATGCCCTGGCTTGCTCTTTTATAATGAATTACTGCACATATTCTATCGTACGCGGGTATGTGATTACAAGAATGCTGCACCCCATGTGGACAATCTGGATGCTGCTGTGAGGGCTGAAAAGAGGCAAACACAACACATGCAAGAGCTAGTGAAGGAGCTCAGTGTCTTAGATCAAAGTCTTTCCAGGTCTGATCTTCACTACAGGGAAAGGGCAGCGTTGTCTGAAAAGCAAGCAATGATTCAAGAACAGCTGAGAAACATGAATGGGTTCAGTTCAATTGGGAGGGACTCTCTTGAACCAGTATATTTTGGGAATGGCAGAAGGACACTAGGAGATAAGCTTCAGTTAGCACCACCTCCTATTGATGGGGAATGGCTTCCTAAAAGTGCTATCTATGCACTAGTTGATCTGATAACTGTTGTATTTGGGCGCCCAAAAGGACTTTTTAAGGAGTGTGGAAAGCGCATACAGTCGGGGATGCGTATAATTCAAGATGAGTTATTGAAGCTTGGAATTACTGATGGTGTCAGAGAAGTGGACTTGCAACACTCTTCTATCTATATGGCTGGAGTATACTTAATGCTACTAATTCAGTTTCTTGAAAACAAAGTGGCCTTAGAGCTCACACGAGCAGAATACGCTGAAGCGCAGCAGGCTTTGGTTCAGATGAAAAATTGGTTCATGCGGTTTCCGACTATATTACAGCCATGTGAATGCATCATTGAGATGCTAAGAGGCCAATATGCTCATTCTGTTGGCTGTTATAATGAAGCCGTCTTTCATTATATTGAAGCAGTAAAGCTCACGGACAGCAAATCAATGCAAGCTATGTGCCAAGTTTATGCAGCTGTTTCTTATATCTGCATTGGTGATGCTGAATCTAATTCACAGGCACTTGATTTGATTGGGCCAGTTTATGAAGTAATGGATTCTTTTGTAGGGGTTAGAGAGAAAACTGGTGTTCTCTTTGCTTACGGACTTTTATTGATGAAGCAACAAGATCTACAAGAAGCAAGAATTCGTTTGGCGAAGGGATTGCAGTTGACACATACTTATTTGGGGAACCTTCAACTTATTTCCCAATATTTAACAACCCTTGGCAGTTTGGCCATTGTATTGCGTGACACTGTACAAGCCAGGGAGATTTTGAGATCGTCTTTGACCTTGGCAAAGAAGCTTTGTGATGTTCCTTCTCAAGTCTGGGTGCTGACTGTTTTGACAGCTTTATATAAAGAATTAGGAGAAAGAGGAAATGAATTGGACAATGCTGATTATCAGACAAAAAAATCTGAAGACCTGCATAAGAGGCTGGCTGATGCACAAGCGTCCATTTATCATATTGAAATAATTGAGAGAGTAAGATTTGAAGTTCCACAATTACATGAGTTGGAAATCAGGCGTGCAATGGCAGGACCAAGCATGGGAGTTAATAATCTTGATATTCCAGAATCTATTGGCCTGCCAGCACAAGCACCCGTTCCATCATCAATGCTAGTTGATATAGATGGTAGTGGTAGAAGACGTGGAAAACGGAGAATTTAG
Protein sequence

>Msa0777320

MCDFSFPSPLTPLPCFKQNKKKHNQKTKTKNLRKKETRMEAIAEGLWGLADHHENRGEIAKAVKCLEAICQSQVSFFPIVEVKTRLRIATILLHHSHNANHAKSHLERCQLLLKAIPSCFELKCRAYSLLSQCYHLVGAIQPQKQVLFKGLDLAASSGNGNNEISTKLWSCNFNSQLANALSIEGDYRGSISALECGYACATEVCYPELQMFFATSLLHAHLMQWDDDNLVEQAVNKCNEIWESIQPDKRQQCPGLLFYNELLHIFYRTRVCDYKNAAPHVDNLDAAVRAEKRQTQHMQELVKELSVLDQSLSRSDLHYRERAALSEKQAMIQEQLRNMNGFSSIGRDSLEPVYFGNGRRTLGDKLQLAPPPIDGEWLPKSAIYALVDLITVVFGRPKGLFKECGKRIQSGMRIIQDELLKLGITDGVREVDLQHSSIYMAGVYLMLLIQFLENKVALELTRAEYAEAQQALVQMKNWFMRFPTILQPCECIIEMLRGQYAHSVGCYNEAVFHYIEAVKLTDSKSMQAMCQVYAAVSYICIGDAESNSQALDLIGPVYEVMDSFVGVREKTGVLFAYGLLLMKQQDLQEARIRLAKGLQLTHTYLGNLQLISQYLTTLGSLAIVLRDTVQAREILRSSLTLAKKLCDVPSQVWVLTVLTALYKELGERGNELDNADYQTKKSEDLHKRLADAQASIYHIEIIERVRFEVPQLHELEIRRAMAGPSMGVNNLDIPESIGLPAQAPVPSSMLVDIDGSGRRRGKRRI*