AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0855510

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0855510 MtrunA17_Chr5g0433561 100.000 200 0 0 1 200 1 200 2.05e-150 415
Msa0855510 MtrunA17_Chr3g0109721 93.500 200 13 0 1 200 1 200 3.05e-143 397
Msa0855510 MtrunA17_Chr8g0390561 67.358 193 62 1 8 200 7 198 7.67e-97 279
Msa0855510 MtrunA17_Chr1g0199331 65.269 167 57 1 8 173 29 195 1.20e-78 233
Msa0855510 MtrunA17_Chr4g0055651 42.268 194 105 3 12 200 10 201 2.36e-50 161
Msa0855510 MtrunA17_Chr3g0123971 44.099 161 90 0 12 172 11 171 1.67e-49 159
Msa0855510 MtrunA17_Chr4g0032201 42.781 187 99 2 12 193 14 197 2.40e-49 159
Msa0855510 MtrunA17_Chr8g0382221 44.099 161 90 0 12 172 11 171 2.89e-49 159
Msa0855510 MtrunA17_Chr6g0458081 44.375 160 89 0 12 171 8 167 3.59e-49 159
Msa0855510 MtrunA17_Chr3g0112681 41.584 202 105 3 12 200 14 215 5.88e-49 158
Msa0855510 MtrunA17_Chr8g0381841 40.976 205 104 4 12 199 19 223 8.79e-49 158
Msa0855510 MtrunA17_Chr4g0040781 38.614 202 111 2 12 200 15 216 9.55e-49 158
Msa0855510 MtrunA17_Chr4g0046261 39.109 202 110 2 12 200 15 216 4.86e-48 156
Msa0855510 MtrunA17_Chr2g0283131 38.614 202 111 2 12 200 15 216 6.80e-48 155
Msa0855510 MtrunA17_Chr2g0315551 39.806 206 103 3 12 200 15 216 9.83e-48 155
Msa0855510 MtrunA17_Chr3g0123821 39.819 221 111 5 1 199 1 221 1.02e-47 155
Msa0855510 MtrunA17_Chr2g0276941 48.366 153 79 0 12 164 17 169 2.55e-47 154
Msa0855510 MtrunA17_Chr6g0482721 39.604 202 109 2 12 200 14 215 3.25e-47 154
Msa0855510 MtrunA17_Chr2g0319951 44.444 162 90 0 12 173 15 176 7.36e-47 153
Msa0855510 MtrunA17_Chr8g0349711 41.875 160 93 0 12 171 8 167 8.95e-47 153
Msa0855510 MtrunA17_Chr5g0400131 39.773 176 106 0 12 187 11 186 1.37e-46 152
Msa0855510 MtrunA17_Chr8g0349681 37.688 199 114 1 12 200 386 584 1.61e-46 161
Msa0855510 MtrunA17_Chr8g0349681 41.358 162 95 0 12 173 177 338 5.09e-43 151
Msa0855510 MtrunA17_Chr8g0349681 41.830 153 89 0 12 164 15 167 4.33e-41 146
Msa0855510 MtrunA17_Chr2g0290891 42.500 160 92 0 12 171 8 167 2.65e-46 151
Msa0855510 MtrunA17_Chr7g0250531 39.583 192 113 1 12 200 10 201 3.59e-46 151
Msa0855510 MtrunA17_Chr4g0055081 41.615 161 94 0 12 172 11 171 4.50e-46 150
Msa0855510 MtrunA17_Chr7g0275991 41.718 163 95 0 12 174 22 184 4.81e-46 151
Msa0855510 MtrunA17_Chr8g0346421 41.899 179 99 1 12 185 28 206 8.58e-46 151
Msa0855510 MtrunA17_Chr1g0189361 37.981 208 110 3 12 200 16 223 1.65e-45 150
Msa0855510 MtrunA17_Chr8g0351861 46.405 153 82 0 12 164 18 170 2.77e-45 149
Msa0855510 MtrunA17_Chr1g0182301 37.688 199 112 4 12 199 17 214 6.44e-45 148
Msa0855510 MtrunA17_Chr7g0231131 37.931 203 111 2 12 199 17 219 8.23e-45 148
Msa0855510 MtrunA17_Chr8g0335471 40.000 195 109 3 12 200 10 202 1.08e-44 147
Msa0855510 MtrunA17_Chr1g0182321 37.688 199 112 4 12 199 17 214 1.40e-44 147
Msa0855510 MtrunA17_Chr1g0174281 40.782 179 98 1 12 182 17 195 2.79e-44 147
Msa0855510 MtrunA17_Chr7g0234201 38.049 205 107 4 12 200 15 215 7.97e-44 145
Msa0855510 MtrunA17_Chr2g0325091 42.500 160 92 0 12 171 13 172 1.08e-43 145
Msa0855510 MtrunA17_Chr2g0276931 40.936 171 100 1 12 182 11 180 1.53e-43 144
Msa0855510 MtrunA17_Chr1g0212521 38.384 198 112 4 12 199 17 214 1.83e-43 144
Msa0855510 MtrunA17_Chr4g0030911 37.056 197 115 3 12 199 17 213 9.54e-43 142
Msa0855510 MtrunA17_Chr7g0263071 41.104 163 95 1 12 173 17 179 2.73e-42 141
Msa0855510 MtrunA17_Chr7g0214241 40.000 160 96 0 12 171 17 176 1.56e-41 139
Msa0855510 MtrunA17_Chr8g0384311 38.974 195 111 5 12 199 15 208 2.28e-39 134
Msa0855510 MtrunA17_Chr8g0392931 45.513 156 85 0 12 167 16 171 8.08e-39 132
Msa0855510 MtrunA17_Chr2g0327911 33.673 196 122 4 12 199 17 212 8.30e-39 132
Msa0855510 MtrunA17_Chr7g0265001 37.624 202 116 4 8 200 14 214 9.65e-38 130
Msa0855510 MtrunA17_Chr8g0383261 36.082 194 117 4 12 198 14 207 9.64e-37 127
Msa0855510 MtrunA17_Chr1g0159481 37.563 197 114 6 12 200 19 214 1.02e-36 127
Msa0855510 MtrunA17_Chr1g0197331 35.885 209 123 6 2 200 5 212 1.64e-36 126
Msa0855510 MtrunA17_Chr1g0180291 37.313 201 115 5 8 199 12 210 1.92e-36 126
Msa0855510 MtrunA17_Chr3g0130271 37.245 196 114 6 12 199 14 208 2.48e-35 123
Msa0855510 MtrunA17_Chr6g0466301 39.394 165 93 3 12 169 10 174 4.26e-35 122
Msa0855510 MtrunA17_Chr6g0465491 39.394 165 93 3 12 169 10 174 4.26e-35 122
Msa0855510 MtrunA17_Chr1g0201121 39.394 165 93 3 12 169 10 174 9.79e-34 119
Msa0855510 MtrunA17_Chr4g0034871 38.182 165 95 3 12 169 10 174 1.44e-33 119
Msa0855510 MtrunA17_Chr2g0331691 34.595 185 114 3 1 178 1 185 3.11e-32 115
Msa0855510 MtrunA17_Chr4g0004661 35.632 174 105 3 12 178 66 239 7.33e-31 113
Msa0855510 MtrunA17_Chr3g0138101 32.948 173 110 4 12 181 15 184 1.26e-24 96.3
Msa0855510 MtrunA17_Chr3g0138111 32.948 173 110 4 12 181 15 184 1.46e-24 95.9
Msa0855510 MtrunA17_Chr3g0138121 32.948 173 110 4 12 181 15 184 1.63e-24 95.9
Msa0855510 MtrunA17_Chr2g0331841 62.712 59 22 0 78 136 1 59 3.66e-22 86.3
Msa0855510 MtrunA17_Chr6g0465471 32.500 160 101 4 27 179 7 166 1.04e-20 85.5
Msa0855510 MtrunA17_Chr6g0466161 33.333 150 93 4 27 169 7 156 1.43e-20 85.1
Msa0855510 MtrunA17_Chr3g0117931 32.335 167 95 6 12 164 10 172 3.59e-20 84.3
Msa0855510 MtrunA17_Chr8g0371501 32.121 165 98 4 12 164 8 170 6.13e-20 83.2
Msa0855510 MtrunA17_Chr5g0405791 31.515 165 99 4 12 164 8 170 3.22e-19 81.3
Msa0855510 MtrunA17_Chr6g0486041 30.539 167 98 5 12 164 8 170 1.35e-18 80.1
Msa0855510 MtrunA17_Chr4g0037021 30.303 165 101 4 12 164 8 170 1.80e-18 79.3
Msa0855510 MtrunA17_Chr6g0466431 37.113 97 52 1 12 108 10 97 2.45e-18 76.6
Msa0855510 MtrunA17_Chr6g0465611 37.113 97 52 1 12 108 10 97 2.45e-18 76.6
Msa0855510 MtrunA17_Chr4g0046211 32.787 122 79 3 12 132 8 127 3.70e-18 77.4
Msa0855510 MtrunA17_Chr2g0325101 29.091 165 103 4 12 164 8 170 6.58e-18 77.8
Msa0855510 MtrunA17_Chr2g0331831 46.154 65 34 1 136 200 2 65 8.88e-15 66.2
Msa0855510 MtrunA17_Chr5g0443631 30.588 170 108 4 9 171 103 269 9.02e-15 70.9
Msa0855510 MtrunA17_Chr4g0024431 30.000 170 109 4 9 171 90 256 1.44e-13 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0855510 AT5G45130.1 80.000 200 40 0 1 200 1 200 2.20e-119 337
Msa0855510 AT4G19640.1 78.000 200 44 0 1 200 1 200 1.62e-117 332
Msa0855510 AT5G45130.2 81.283 187 35 0 14 200 22 208 1.54e-112 320
Msa0855510 AT4G19640.2 83.571 140 23 0 1 140 1 140 7.79e-83 242
Msa0855510 AT4G19640.3 81.690 142 26 0 1 142 1 142 1.06e-82 244
Msa0855510 AT3G54840.1 63.158 171 62 1 8 177 31 201 1.68e-77 231
Msa0855510 AT3G54840.3 63.253 166 60 1 13 177 2 167 1.92e-75 224
Msa0855510 AT3G54840.2 63.924 158 56 1 8 164 31 188 1.78e-71 215
Msa0855510 AT5G60860.1 39.109 202 110 2 12 200 15 216 1.68e-49 160
Msa0855510 AT1G07410.1 42.000 200 105 3 12 200 14 213 2.37e-49 160
Msa0855510 AT4G39990.1 38.835 206 107 4 12 200 19 222 2.70e-49 160
Msa0855510 AT4G18800.1 39.196 199 111 2 12 200 15 213 5.23e-49 159
Msa0855510 AT5G45750.1 38.806 201 111 2 12 200 15 215 1.38e-48 158
Msa0855510 AT2G44610.1 44.720 161 89 0 12 172 11 171 2.44e-48 157
Msa0855510 AT5G10260.1 43.478 161 91 0 12 172 11 171 2.53e-48 157
Msa0855510 AT2G22290.1 38.776 196 113 2 12 200 11 206 4.39e-48 156
Msa0855510 AT4G35860.1 44.375 160 89 0 12 171 8 167 4.43e-48 156
Msa0855510 AT1G16920.1 40.796 201 107 2 12 200 15 215 4.70e-48 156
Msa0855510 AT1G09630.1 46.914 162 86 0 12 173 14 175 7.72e-48 156
Msa0855510 AT4G17160.1 44.586 157 87 0 12 168 8 164 1.08e-47 155
Msa0855510 AT1G06400.1 40.299 201 108 2 12 200 15 215 1.49e-47 155
Msa0855510 AT4G18430.1 38.119 202 112 2 12 200 15 216 1.70e-47 155
Msa0855510 AT1G28550.1 43.210 162 92 0 12 173 15 176 5.24e-47 154
Msa0855510 AT3G07410.1 41.379 203 105 3 12 200 14 216 5.50e-47 154
Msa0855510 AT3G15060.1 43.827 162 91 0 12 173 15 176 7.95e-47 153
Msa0855510 AT4G39890.1 42.593 162 92 1 12 172 11 172 8.39e-47 153
Msa0855510 AT5G59150.1 41.262 206 101 4 12 200 14 216 1.24e-46 153
Msa0855510 AT2G33870.1 43.827 162 91 0 12 173 15 176 1.57e-46 152
Msa0855510 AT3G46830.1 40.291 206 104 3 12 200 14 217 1.85e-46 152
Msa0855510 AT3G46830.2 40.291 206 104 3 12 200 14 217 1.85e-46 152
Msa0855510 AT4G17530.1 40.206 194 109 3 12 200 10 201 2.04e-46 152
Msa0855510 AT5G47200.1 40.104 192 112 1 12 200 10 201 4.69e-46 151
Msa0855510 AT1G02130.1 40.513 195 108 3 12 200 10 202 5.63e-46 150
Msa0855510 AT5G47520.1 37.561 205 112 4 12 200 16 220 7.78e-46 151
Msa0855510 AT5G65270.1 42.500 160 92 0 12 171 19 178 1.23e-45 150
Msa0855510 AT4G17170.1 42.675 157 90 0 12 168 8 164 1.99e-45 149
Msa0855510 AT2G43130.1 38.500 200 112 2 12 200 14 213 5.21e-45 149
Msa0855510 AT3G12160.1 43.827 162 91 0 12 173 17 178 6.91e-45 149
Msa0855510 AT5G59840.1 38.500 200 109 4 12 199 17 214 3.48e-44 147
Msa0855510 AT3G11730.1 37.113 194 115 1 12 198 10 203 7.59e-44 145
Msa0855510 AT5G47960.1 41.667 168 98 0 12 179 17 184 9.33e-44 145
Msa0855510 AT1G05810.1 36.946 203 114 3 12 200 14 216 2.32e-43 144
Msa0855510 AT3G46060.2 37.500 200 111 4 12 199 17 214 3.72e-43 144
Msa0855510 AT3G46060.3 37.500 200 111 4 12 199 17 214 3.72e-43 144
Msa0855510 AT3G46060.1 37.500 200 111 4 12 199 17 214 3.72e-43 144
Msa0855510 AT5G64990.1 40.476 168 100 0 4 171 1 168 4.92e-43 143
Msa0855510 AT1G05810.2 36.946 203 114 3 12 200 60 262 5.40e-43 145
Msa0855510 AT3G53610.2 36.453 203 109 4 12 199 17 214 1.47e-42 142
Msa0855510 AT3G53610.3 36.453 203 109 4 12 199 17 214 1.47e-42 142
Msa0855510 AT3G53610.1 36.453 203 109 4 12 199 17 214 1.47e-42 142
Msa0855510 AT1G73640.1 45.098 153 84 0 12 164 15 167 8.05e-42 141
Msa0855510 AT2G31680.1 35.784 204 116 3 12 200 14 217 1.88e-41 140
Msa0855510 AT1G18200.1 42.500 160 92 0 12 171 15 174 3.20e-41 139
Msa0855510 AT1G01200.1 42.236 161 92 1 12 171 30 190 2.62e-40 137
Msa0855510 AT5G64990.2 38.857 175 100 1 4 171 1 175 3.08e-40 136
Msa0855510 AT5G03520.1 38.384 198 113 4 12 200 17 214 8.27e-40 135
Msa0855510 AT3G09900.1 37.000 200 115 3 12 200 17 216 2.12e-39 134
Msa0855510 AT4G35860.2 46.667 120 64 0 52 171 2 121 3.98e-37 127
Msa0855510 AT1G22740.1 40.000 165 92 3 12 169 10 174 1.13e-36 127
Msa0855510 AT5G03530.2 38.614 202 113 6 8 200 11 210 4.88e-36 125
Msa0855510 AT5G03530.1 38.614 202 113 6 8 200 11 210 4.88e-36 125
Msa0855510 AT1G43890.3 40.741 162 93 3 12 171 15 175 3.69e-35 123
Msa0855510 AT1G43890.1 40.741 162 93 3 12 171 15 175 3.69e-35 123
Msa0855510 AT1G43890.2 40.741 162 93 3 12 171 15 175 3.69e-35 123
Msa0855510 AT3G18820.1 37.576 165 96 3 12 169 10 174 2.43e-33 119
Msa0855510 AT1G52280.1 35.795 176 106 3 12 180 10 185 2.79e-33 118
Msa0855510 AT2G21880.1 38.415 164 94 3 12 168 11 174 3.06e-33 118
Msa0855510 AT5G59150.2 40.361 166 79 4 52 200 3 165 7.27e-33 116
Msa0855510 AT4G09720.1 39.773 176 97 4 1 169 1 174 1.72e-32 116
Msa0855510 AT3G16100.1 36.207 174 104 3 12 178 10 183 2.70e-32 116
Msa0855510 AT5G39620.1 38.554 166 95 4 12 170 7 172 2.82e-32 115
Msa0855510 AT1G49300.2 37.423 163 95 3 12 167 10 172 2.95e-31 113
Msa0855510 AT1G49300.1 37.423 163 95 3 12 167 10 172 2.95e-31 113
Msa0855510 AT5G03520.2 36.196 163 95 4 47 200 42 204 1.32e-30 111
Msa0855510 AT3G09910.3 35.897 195 122 3 8 200 11 204 2.28e-30 111
Msa0855510 AT3G09910.1 35.897 195 122 3 8 200 11 204 2.28e-30 111
Msa0855510 AT3G09910.2 35.897 195 122 3 8 200 11 204 2.28e-30 111
Msa0855510 AT4G09720.4 38.674 181 97 5 1 169 1 179 8.97e-30 109
Msa0855510 AT4G09720.3 37.433 187 97 5 1 169 1 185 5.61e-29 107
Msa0855510 AT3G09910.5 39.286 168 99 3 8 173 11 177 1.22e-28 106
Msa0855510 AT3G09910.4 39.286 168 99 3 8 173 11 177 1.22e-28 106
Msa0855510 AT2G21880.4 36.735 147 86 3 29 168 3 149 8.97e-26 98.6
Msa0855510 AT2G21880.3 36.735 147 86 3 29 168 3 149 8.97e-26 98.6
Msa0855510 AT5G55080.1 30.625 160 108 3 12 171 15 171 4.30e-25 97.8
Msa0855510 AT4G09720.6 39.416 137 76 3 40 169 4 140 1.40e-24 95.1
Msa0855510 AT4G09720.5 39.416 137 76 3 40 169 4 140 1.40e-24 95.1
Msa0855510 AT4G09720.2 39.416 137 76 3 40 169 4 140 1.40e-24 95.1
Msa0855510 AT5G55190.1 33.750 160 103 3 12 171 15 171 3.08e-24 95.5
Msa0855510 AT5G20020.1 33.750 160 103 3 12 171 15 171 3.81e-24 95.5
Msa0855510 AT5G20010.1 33.750 160 103 3 12 171 15 171 3.89e-24 95.5
Msa0855510 AT2G21880.2 33.537 164 94 4 12 168 11 166 1.98e-23 93.2
Msa0855510 AT3G51300.1 31.928 166 99 4 11 164 7 170 2.66e-20 84.7
Msa0855510 AT2G44690.1 32.941 170 100 5 12 169 20 187 5.94e-20 84.0
Msa0855510 AT2G17800.2 32.727 165 97 4 12 164 8 170 6.50e-20 83.6
Msa0855510 AT2G17800.1 32.727 165 97 4 12 164 8 170 6.50e-20 83.6
Msa0855510 AT4G28950.1 31.515 165 97 5 12 164 8 168 7.80e-20 83.6
Msa0855510 AT4G35950.1 32.727 165 97 5 12 164 8 170 2.11e-19 82.4
Msa0855510 AT3G48040.1 29.940 167 99 5 12 164 10 172 8.08e-19 80.9
Msa0855510 AT4G35020.1 32.121 165 98 5 12 164 8 170 1.36e-18 80.1
Msa0855510 AT4G35020.2 32.121 165 98 5 12 164 8 170 1.36e-18 80.1
Msa0855510 AT4G35020.3 32.121 165 98 5 12 164 8 170 1.36e-18 80.1
Msa0855510 AT5G62880.1 31.737 167 96 6 12 164 10 172 2.97e-18 79.7
Msa0855510 AT1G75840.1 30.909 165 100 5 12 164 8 170 5.56e-18 78.6
Msa0855510 AT1G20090.1 30.909 165 100 5 12 164 7 169 7.38e-18 78.2
Msa0855510 AT5G46025.1 38.710 93 56 1 80 171 14 106 1.34e-17 75.5
Msa0855510 AT5G45970.1 29.697 165 102 4 12 164 8 170 1.36e-17 77.8
Msa0855510 AT3G48040.2 29.560 159 94 5 12 156 10 164 9.19e-17 74.7
Msa0855510 AT5G62880.2 31.447 159 91 6 12 156 10 164 3.11e-16 73.9
Msa0855510 AT3G51290.2 34.109 129 72 3 48 164 644 771 9.04e-16 75.5
Msa0855510 AT4G35020.4 32.456 114 74 3 12 124 8 119 9.59e-13 63.5
Msa0855510 AT4G35020.5 32.456 114 74 3 12 124 8 119 9.59e-13 63.5
Msa0855510 AT3G21700.3 28.655 171 111 5 9 171 105 272 1.21e-11 62.8
Msa0855510 AT5G09910.1 27.485 171 87 5 12 148 24 191 9.58e-11 60.5
Msa0855510 AT5G09910.4 27.485 171 87 5 12 148 24 191 9.58e-11 60.5

Find 66 sgRNAs with CRISPR-Local

Find 372 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGGTCAATTCCTTGAATTTC+AGG 0.172043 5_4:-48827779 Msa0855510:intron
GCGAAGCTCCGACAAGTTTA+TGG 0.180216 5_4:-48821621 Msa0855510:three_prime_UTR
TCAGGTTCTTCTTGGTGATA+TGG 0.216552 5_4:-48827839 Msa0855510:intron
GTTCAATTTCAGGTTCTTCT+TGG 0.242123 5_4:-48827847 Msa0855510:intron
CACCAACCTTAACGCTAAAT+TGG 0.250278 5_4:-48827957 Msa0855510:intron
CGTAGCCATTGAGTTGAAAT+TGG 0.254275 5_4:+48827988 None:intergenic
CCACAGTGAAATTTGAGATT+TGG 0.262162 5_4:-48824993 Msa0855510:CDS
TTGTGCCCTTGGTAACTTCT+TGG 0.276630 5_4:+48821806 None:intergenic
CTTGCGTGCAAACGCGCTTT+TGG 0.278703 5_4:+48828245 None:intergenic
CACAGTGAAATTTGAGATTT+GGG 0.299158 5_4:-48824992 Msa0855510:CDS
CGTCATTTACTGCCAACGTC+TGG 0.316274 5_4:+48825016 None:intergenic
TGATGATCTGTTATGTATAT+AGG 0.331167 5_4:-48821534 Msa0855510:three_prime_UTR
CAGGTTCTTCTTGGTGATAT+GGG 0.343041 5_4:-48827838 Msa0855510:CDS
GCTTGTAATGATAAATTAGA+AGG 0.345274 5_4:+48821413 None:intergenic
GTGAAACAGGAATCAACAAT+AGG 0.375057 5_4:-48825054 Msa0855510:intron
GAGATACCAATTTAGCGTTA+AGG 0.389220 5_4:+48827951 None:intergenic
CATTTACACGAGCGAAGAAA+TGG 0.391385 5_4:-48824661 Msa0855510:CDS
CGTGTATATGCTGAGGAAAA+TGG 0.414206 5_4:-48822788 Msa0855510:CDS
CGAAGCTCCGACAAGTTTAT+GGG 0.414908 5_4:-48821620 Msa0855510:three_prime_UTR
GATGATCTGTTATGTATATA+GGG 0.419177 5_4:-48821533 Msa0855510:three_prime_UTR
GCAAAAGCCACGACCATGTT+CGG 0.437301 5_4:+48824076 None:intergenic
CTAGCTAAAAGATAGTATAA+TGG 0.438835 5_4:-48821391 None:intergenic
TGAAACAGGAATCAACAATA+GGG 0.443425 5_4:-48825053 Msa0855510:intron
TACCTTGCTTCTGAAGCTCT+TGG 0.443949 5_4:+48824636 None:intergenic
CAACCAGCGCAAAACCCAGC+AGG 0.448579 5_4:-48821786 Msa0855510:CDS
CTTCTTGGTGATATGGGTGC+TGG 0.450654 5_4:-48827832 Msa0855510:CDS
TCGTTCCAATTTCAACTCAA+TGG 0.452662 5_4:-48827993 Msa0855510:exon
AATGACATAATGTAACTTGC+TGG 0.453861 5_4:-48821592 Msa0855510:intron
GCAGCTCTGGTTCCTTCGGC+AGG 0.470619 5_4:+48821744 None:intergenic
TGTCTATGATATTACTAACT+TGG 0.471350 5_4:-48824899 Msa0855510:intron
TGCTGGTAACAAAGCTGACT+TGG 0.472663 5_4:-48824056 Msa0855510:CDS
ATAAAATATGTCATTAACAT+TGG 0.476631 5_4:+48822730 None:intergenic
TTTGCAGCCCATAAACTTGT+CGG 0.476854 5_4:+48821613 None:intergenic
TCAACAAGAACCATCCCTGC+TGG 0.485332 5_4:+48821771 None:intergenic
TGAACAACATGATGCAGCTC+TGG 0.499235 5_4:+48821731 None:intergenic
TGAGTTGAAATTGGAACGAT+CGG 0.502735 5_4:+48827997 None:intergenic
AAGCTGACTTGGAAGATAAG+AGG 0.510951 5_4:-48824045 Msa0855510:CDS
TAGGAAGATTCCACTCAACT+TGG 0.513291 5_4:+48828270 None:intergenic
AACAAAACGCAAAACAAGGC+TGG 0.519475 5_4:+48827804 None:intergenic
ACAGAAAACGCGTTTAACTA+AGG 0.524264 5_4:+48821684 None:intergenic
TGATGCAGCTCTGGTTCCTT+CGG 0.524363 5_4:+48821740 None:intergenic
GTCATTTACTGCCAACGTCT+GGG 0.532033 5_4:+48825017 None:intergenic
TTAGCTCCCATGTACTATAG+AGG 0.537219 5_4:-48824940 Msa0855510:CDS
TTTGAGATTTGGGACACAGC+AGG 0.538081 5_4:-48824982 Msa0855510:CDS
AGCGCAAAACCCAGCAGGGA+TGG 0.543975 5_4:-48821781 Msa0855510:CDS
TACCAATTTAGCGTTAAGGT+TGG 0.553177 5_4:+48827955 None:intergenic
ATTTACACGAGCGAAGAAAT+GGG 0.562436 5_4:-48824660 Msa0855510:CDS
AGCAGCGCCTCTATAGTACA+TGG 0.565513 5_4:+48824933 None:intergenic
CAACAAGAACCATCCCTGCT+GGG 0.567898 5_4:+48821772 None:intergenic
CAACTTCAATAAGCAAAATG+TGG 0.578284 5_4:-48821441 Msa0855510:three_prime_UTR
AGGGAATCCGAACATGGTCG+TGG 0.578957 5_4:-48824083 Msa0855510:CDS
TGTTGCAGGGAATCCGAACA+TGG 0.580245 5_4:-48824089 Msa0855510:intron
AACCAGCGCAAAACCCAGCA+GGG 0.586823 5_4:-48821785 Msa0855510:CDS
CCTTAACAAAACGCAAAACA+AGG 0.590364 5_4:+48827800 None:intergenic
TTCAACTCAATGGCTACGAT+CGG 0.593200 5_4:-48827983 Msa0855510:exon
TGAAATTGGAACGATCGGAA+TGG 0.594091 5_4:+48828002 None:intergenic
AGTACATGGGAGCTAAGCTA+TGG 0.598496 5_4:+48824947 None:intergenic
GTCCAAGAGCTTCAGAAGCA+AGG 0.599811 5_4:-48824638 Msa0855510:intron
GAAAACGCGTTTAACTAAGG+TGG 0.612782 5_4:+48821687 None:intergenic
CTTGTTGATAGACCTGCCGA+AGG 0.652869 5_4:-48821756 Msa0855510:CDS
GGAAGCACGTGTATATGCTG+AGG 0.658380 5_4:-48822795 Msa0855510:CDS
GAAACAGGAATCAACAATAG+GGG 0.660375 5_4:-48825052 Msa0855510:intron
GAACAGCCAAGAAGTTACCA+AGG 0.663916 5_4:-48821812 Msa0855510:intron
AACAGCCAAGAAGTTACCAA+GGG 0.689870 5_4:-48821811 Msa0855510:intron
GCAGCGCCTCTATAGTACAT+GGG 0.698335 5_4:+48824934 None:intergenic
CCAAATCTCAAATTTCACTG+TGG 0.747675 5_4:+48824993 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAAATTTTAGATTGTAAAA+AGG - chr5_4:48825106-48825125 Msa0855510:intron 10.0%
!! ACAATAAGGTTAATTTAATT+TGG - chr5_4:48821792-48821811 Msa0855510:CDS 15.0%
!!! ATTTATATGAAGAATTTTCA+TGG - chr5_4:48821967-48821986 Msa0855510:intron 15.0%
!!! TTTATATGAAGAATTTTCAT+GGG - chr5_4:48821968-48821987 Msa0855510:intron 15.0%
!!! TTTTTGACTAAATTGAAATT+GGG - chr5_4:48822077-48822096 Msa0855510:intron 15.0%
!!! AAGAAGAAACAATTTTATTT+AGG + chr5_4:48822447-48822466 None:intergenic 15.0%
!!! TTTGTTATTGATAAATATCT+AGG + chr5_4:48822918-48822937 None:intergenic 15.0%
!! AAAAAATCTCAAAATGAAAT+CGG - chr5_4:48822977-48822996 Msa0855510:intron 15.0%
!! TTAATTAAAACCTTAATCAT+GGG + chr5_4:48823607-48823626 None:intergenic 15.0%
!! TTTAATTAAAACCTTAATCA+TGG + chr5_4:48823608-48823627 None:intergenic 15.0%
!! TATGTTAATTTATTTGTAGA+CGG + chr5_4:48823990-48824009 None:intergenic 15.0%
!! TTATATATAGTTTATTACTG+TGG - chr5_4:48824941-48824960 Msa0855510:CDS 15.0%
!! TAAGAAGAAATATTAGAATA+TGG + chr5_4:48825195-48825214 None:intergenic 15.0%
!! ATTAATATATGAATTGTGAA+CGG - chr5_4:48825336-48825355 Msa0855510:intron 15.0%
!! AAACAATAGCTAAAAAATTT+CGG + chr5_4:48825452-48825471 None:intergenic 15.0%
!! ATAAAATATGTCATTAACAT+TGG + chr5_4:48826938-48826957 None:intergenic 15.0%
!!! AATGACATATTTTATGAAAT+AGG - chr5_4:48826943-48826962 Msa0855510:intron 15.0%
!! ATGATATTTAAGTGTAATAA+TGG - chr5_4:48827709-48827728 Msa0855510:intron 15.0%
!! AATTGAATGGAAAAAAAAAG+GGG + chr5_4:48821754-48821773 None:intergenic 20.0%
!! GAATTGAATGGAAAAAAAAA+GGG + chr5_4:48821755-48821774 None:intergenic 20.0%
!! AAAAACTATATCGAATTGAA+TGG + chr5_4:48821767-48821786 None:intergenic 20.0%
!!! ATAGTTTTTGTTTCACAATA+AGG - chr5_4:48821778-48821797 Msa0855510:CDS 20.0%
!! ATTCAGATGATAAATCAAAA+GGG + chr5_4:48821920-48821939 None:intergenic 20.0%
!! AATTCAGATGATAAATCAAA+AGG + chr5_4:48821921-48821940 None:intergenic 20.0%
!! ATTTATCATCTGAATTCAAT+TGG - chr5_4:48821925-48821944 Msa0855510:intron 20.0%
!! TTTATCATCTGAATTCAATT+GGG - chr5_4:48821926-48821945 Msa0855510:intron 20.0%
!!! GTTTTTGACTAAATTGAAAT+TGG - chr5_4:48822076-48822095 Msa0855510:intron 20.0%
!!! TTTTGACTAAATTGAAATTG+GGG - chr5_4:48822078-48822097 Msa0855510:intron 20.0%
!! ATCTTATCTTATAGAATGTA+TGG - chr5_4:48822294-48822313 Msa0855510:intron 20.0%
!! ATATGTAACTCTTGTATTTA+CGG + chr5_4:48822580-48822599 None:intergenic 20.0%
!!! TCTAGCAGAATATTTTTTTA+GGG + chr5_4:48823071-48823090 None:intergenic 20.0%
!!! GTTTAGCATAATTATTCTTT+TGG + chr5_4:48823094-48823113 None:intergenic 20.0%
!! ACATCAAATTATGTAATTGA+TGG + chr5_4:48823190-48823209 None:intergenic 20.0%
!!! TTGAATTTTGTTATTAGGTA+TGG + chr5_4:48823347-48823366 None:intergenic 20.0%
!!! AATATTGGAAGCTTTAATTT+TGG + chr5_4:48823420-48823439 None:intergenic 20.0%
!! GCAATTTAATTGAACAATAT+TGG + chr5_4:48823435-48823454 None:intergenic 20.0%
!! AATAATGATCATGATTGAAA+AGG - chr5_4:48823576-48823595 Msa0855510:intron 20.0%
!! ATAATGATCATGATTGAAAA+GGG - chr5_4:48823577-48823596 Msa0855510:intron 20.0%
!!! TCCTATATTTTTTACATTAG+CGG - chr5_4:48824028-48824047 Msa0855510:intron 20.0%
!!! TCATAGCATGTTATATTTTT+TGG - chr5_4:48824081-48824100 Msa0855510:CDS 20.0%
!!! CATAGCATGTTATATTTTTT+GGG - chr5_4:48824082-48824101 Msa0855510:CDS 20.0%
!! TTTACTTAAAAGTTCAAACT+GGG - chr5_4:48824149-48824168 Msa0855510:intron 20.0%
!!! TTATTTTGTATATAGTAGTG+TGG - chr5_4:48824485-48824504 Msa0855510:intron 20.0%
!!! TATTTTGTATATAGTAGTGT+GGG - chr5_4:48824486-48824505 Msa0855510:intron 20.0%
!!! TCTTATTCTTACATTTTTTC+TGG - chr5_4:48825075-48825094 Msa0855510:intron 20.0%
!! GCATAAGAATAAATCATATA+AGG - chr5_4:48827043-48827062 Msa0855510:intron 20.0%
!!! TAAGATGGTATTTTCAAATT+TGG - chr5_4:48827685-48827704 Msa0855510:intron 20.0%
!! AAATTCATTCACACAAATAA+TGG - chr5_4:48827742-48827761 Msa0855510:intron 20.0%
!! TGTTGACAAAAATAAAACAA+CGG + chr5_4:48828186-48828205 None:intergenic 20.0%
!! AACAATATAGACTCTGTTTT+CGG - chr5_4:48821473-48821492 Msa0855510:three_prime_UTR 25.0%
! CGAATTGAATGGAAAAAAAA+AGG + chr5_4:48821756-48821775 None:intergenic 25.0%
!!! AATTTGGTTTGTTCAATTTC+AGG - chr5_4:48821808-48821827 Msa0855510:CDS 25.0%
! GAAAAAAAACCTGAAATTCA+AGG + chr5_4:48821898-48821917 None:intergenic 25.0%
!! AGAATGAATTGTTATGGTTT+TGG - chr5_4:48822201-48822220 Msa0855510:intron 25.0%
! TTATCTTATAGAATGTATGG+TGG - chr5_4:48822297-48822316 Msa0855510:intron 25.0%
!!! AATAAAGTGACTTGTTTTCA+AGG + chr5_4:48823038-48823057 None:intergenic 25.0%
!!! CTAGCAGAATATTTTTTTAG+GGG + chr5_4:48823070-48823089 None:intergenic 25.0%
!!! GTCTAGCAGAATATTTTTTT+AGG + chr5_4:48823072-48823091 None:intergenic 25.0%
! TAAACCAAAATAAGCAAAAC+TGG - chr5_4:48823210-48823229 Msa0855510:intron 25.0%
! AAACCAAAATAAGCAAAACT+GGG - chr5_4:48823211-48823230 Msa0855510:intron 25.0%
!!! GGAGTTTGAATTTTGTTATT+AGG + chr5_4:48823352-48823371 None:intergenic 25.0%
! TTGTTAGTACTAGAATCAAA+CGG + chr5_4:48823457-48823476 None:intergenic 25.0%
!!! NNNNTCTAGGTATTTTCAAG+TGG + chr5_4:48823707-48823726 None:intergenic 25.0%
! ACCGCTAATGTAAAAAATAT+AGG + chr5_4:48824032-48824051 None:intergenic 25.0%
! CTTTACTTAAAAGTTCAAAC+TGG - chr5_4:48824148-48824167 Msa0855510:intron 25.0%
! TGAGTTATCAAACATTCATT+TGG - chr5_4:48824182-48824201 Msa0855510:intron 25.0%
! CAATAAATAACAACAGATCT+CGG + chr5_4:48824532-48824551 None:intergenic 25.0%
! AGTCTATCTGTTTAAAGAAT+TGG + chr5_4:48824555-48824574 None:intergenic 25.0%
! TGTCTATGATATTACTAACT+TGG - chr5_4:48824766-48824785 Msa0855510:intron 25.0%
! AACTAACCCATGATATTTAA+TGG - chr5_4:48825423-48825442 Msa0855510:intron 25.0%
! TTTCCTATACATGTTACAAA+AGG - chr5_4:48825469-48825488 Msa0855510:intron 25.0%
! ATTGTACTTCAAAGTTATAG+TGG - chr5_4:48825508-48825527 Msa0855510:intron 25.0%
! CTAAAATAATGAACTCATTC+TGG - chr5_4:48825550-48825569 Msa0855510:intron 25.0%
! AATTTAGCAGAAAAAATGTG+TGG + chr5_4:48825755-48825774 None:intergenic 25.0%
!! TGCTAAATTTTCAAATACCA+GGG - chr5_4:48825766-48825785 Msa0855510:intron 25.0%
! AAGAGCTTCTTAAGAAATTA+AGG - chr5_4:48826262-48826281 Msa0855510:intron 25.0%
! TTATAAGAGAAGCTATTAGT+TGG - chr5_4:48826304-48826323 Msa0855510:intron 25.0%
! TATAAACTCCTTGAATAAAG+TGG - chr5_4:48826481-48826500 Msa0855510:intron 25.0%
! ATAAACTCCTTGAATAAAGT+GGG - chr5_4:48826482-48826501 Msa0855510:intron 25.0%
! GCAACTGTTTAAATACATAT+AGG + chr5_4:48826770-48826789 None:intergenic 25.0%
! TAAAGTGTATGTAATAGGAA+AGG + chr5_4:48826976-48826995 None:intergenic 25.0%
! TTTCCTATTACATACACTTT+AGG - chr5_4:48826975-48826994 Msa0855510:intron 25.0%
! ACATAATTTATATCAGTCCA+AGG - chr5_4:48827070-48827089 Msa0855510:intron 25.0%
!! TGCAAACAACACAAATATTT+TGG + chr5_4:48827136-48827155 None:intergenic 25.0%
! GGTTAGATAAATGTACATAA+AGG - chr5_4:48827161-48827180 Msa0855510:intron 25.0%
!! GAATTTTATTATTCCTAGTC+TGG - chr5_4:48827199-48827218 Msa0855510:intron 25.0%
!! TAGTCTTAAGTAAGAGAAAA+TGG - chr5_4:48827636-48827655 Msa0855510:intron 25.0%
! ATTGTACTCTCAATATAAGA+TGG - chr5_4:48827670-48827689 Msa0855510:intron 25.0%
!!! TTTTTTAAATACATCGAGAG+AGG + chr5_4:48827780-48827799 None:intergenic 25.0%
! GAATAAAATTCAACATCCAA+GGG + chr5_4:48828111-48828130 None:intergenic 25.0%
! AGAATAAAATTCAACATCCA+AGG + chr5_4:48828112-48828131 None:intergenic 25.0%
! TGATGATCTGTTATGTATAT+AGG - chr5_4:48828131-48828150 Msa0855510:intron 25.0%
! GATGATCTGTTATGTATATA+GGG - chr5_4:48828132-48828151 Msa0855510:intron 25.0%
! GTTGACAAAAATAAAACAAC+GGG + chr5_4:48828185-48828204 None:intergenic 25.0%
! GCTTGTAATGATAAATTAGA+AGG + chr5_4:48828255-48828274 None:intergenic 25.0%
!!! CTTGTTTTGCGTTTTGTTAA+GGG - chr5_4:48821866-48821885 Msa0855510:intron 30.0%
! AAGAATTTTCATGGGTTTCT+AGG - chr5_4:48821976-48821995 Msa0855510:intron 30.0%
CTCGATTACAAAATCATAAC+AGG + chr5_4:48822108-48822127 None:intergenic 30.0%
AGTTCTATTCTGAACAAGAT+AGG - chr5_4:48822169-48822188 Msa0855510:intron 30.0%
GTTGTGAGAATGAATTGTTA+TGG - chr5_4:48822195-48822214 Msa0855510:intron 30.0%
!!! ATGAATTGTTATGGTTTTGG+AGG - chr5_4:48822204-48822223 Msa0855510:intron 30.0%
! AAACATAATGGAAAGAGCAA+AGG + chr5_4:48822885-48822904 None:intergenic 30.0%
GCAAGATGTTAGAATTACTA+TGG + chr5_4:48822956-48822975 None:intergenic 30.0%
AAATCTCAAAATGAAATCGG+AGG - chr5_4:48822980-48822999 Msa0855510:intron 30.0%
GAAGCAACAACAAAAAACAA+AGG - chr5_4:48823486-48823505 Msa0855510:intron 30.0%
!! GATAACTTTAAAGCAGAAAC+TGG - chr5_4:48823537-48823556 Msa0855510:intron 30.0%
! TTTTGTTCCTTTTCTCTTGT+GGG + chr5_4:48823659-48823678 None:intergenic 30.0%
! TTTTTGTTCCTTTTCTCTTG+TGG + chr5_4:48823660-48823679 None:intergenic 30.0%
!!! GGTATTTTCAAGTGGAATAA+GGG + chr5_4:48823699-48823718 None:intergenic 30.0%
!!! AGGTATTTTCAAGTGGAATA+AGG + chr5_4:48823700-48823719 None:intergenic 30.0%
TAACATATATGTAGCAGTGT+CGG - chr5_4:48824003-48824022 Msa0855510:intron 30.0%
ATATAACATGCTATGAAGCA+TGG + chr5_4:48824077-48824096 None:intergenic 30.0%
!!! GCATGTTATATTTTTTGGGT+TGG - chr5_4:48824086-48824105 Msa0855510:intron 30.0%
ATTCACCTAACCAAGTTATT+TGG - chr5_4:48824243-48824262 Msa0855510:intron 30.0%
TTCACCTAACCAAGTTATTT+GGG - chr5_4:48824244-48824263 Msa0855510:intron 30.0%
TTAACCCAAATAACTTGGTT+AGG + chr5_4:48824251-48824270 None:intergenic 30.0%
CAACTTTAACCCAAATAACT+TGG + chr5_4:48824256-48824275 None:intergenic 30.0%
TTAAAGTTGTTCATGAACTC+CGG - chr5_4:48824267-48824286 Msa0855510:intron 30.0%
GCCAAAAAAAATTTATCTCC+CGG - chr5_4:48824346-48824365 Msa0855510:intron 30.0%
!!! ACCGGGAGATAAATTTTTTT+TGG + chr5_4:48824350-48824369 None:intergenic 30.0%
!!! TTATTTTTGTCTTAACCCTC+CGG + chr5_4:48824408-48824427 None:intergenic 30.0%
TCTTTAAACAGATAGACTTG+TGG - chr5_4:48824557-48824576 Msa0855510:intron 30.0%
CTTTAAACAGATAGACTTGT+GGG - chr5_4:48824558-48824577 Msa0855510:intron 30.0%
TATTTGGTCTATTGTGAAAC+AGG - chr5_4:48824598-48824617 Msa0855510:intron 30.0%
TGAAACAGGAATCAACAATA+GGG - chr5_4:48824612-48824631 Msa0855510:intron 30.0%
! CACAGTGAAATTTGAGATTT+GGG - chr5_4:48824673-48824692 Msa0855510:intron 30.0%
!!! TGTGTCATTTTCCTTTCTTT+AGG - chr5_4:48824870-48824889 Msa0855510:intron 30.0%
!!! GTGTCATTTTCCTTTCTTTA+GGG - chr5_4:48824871-48824890 Msa0855510:intron 30.0%
! TGATTATTTCTTCTGTTCAC+AGG - chr5_4:48824978-48824997 Msa0855510:CDS 30.0%
AATATAGCATAGCACAAACA+TGG - chr5_4:48825281-48825300 Msa0855510:intron 30.0%
AAATTAACGCAAAGTTCAGT+AGG + chr5_4:48825401-48825420 None:intergenic 30.0%
CGGTAACCATTAAATATCAT+GGG + chr5_4:48825432-48825451 None:intergenic 30.0%
TCGGTAACCATTAAATATCA+TGG + chr5_4:48825433-48825452 None:intergenic 30.0%
AGTACAATTACAACCAGAAT+GGG + chr5_4:48825496-48825515 None:intergenic 30.0%
AAGTACAATTACAACCAGAA+TGG + chr5_4:48825497-48825516 None:intergenic 30.0%
! CTGCTAAATTTTCAAATACC+AGG - chr5_4:48825765-48825784 Msa0855510:intron 30.0%
! AAATTTTCAAATACCAGGGA+TGG - chr5_4:48825770-48825789 Msa0855510:intron 30.0%
!! CATGTTGATAGTTCTACTAT+CGG - chr5_4:48826422-48826441 Msa0855510:intron 30.0%
! AGCTTATGCGATTTTCATTT+TGG + chr5_4:48826575-48826594 None:intergenic 30.0%
TTCAATGTACAAGCTAAAGT+TGG + chr5_4:48826627-48826646 None:intergenic 30.0%
CAACCTAAAGTGTATGTAAT+AGG + chr5_4:48826981-48827000 None:intergenic 30.0%
! AAATGGAAACTCTTCTTTTG+AGG - chr5_4:48827105-48827124 Msa0855510:intron 30.0%
CATAAAAAAACACATTCGTC+TGG + chr5_4:48827280-48827299 None:intergenic 30.0%
! AATGACATAATGTAACTTGC+TGG - chr5_4:48828073-48828092 Msa0855510:intron 30.0%
CAACTTCAATAAGCAAAATG+TGG - chr5_4:48828224-48828243 Msa0855510:five_prime_UTR 30.0%
! TGAGTTGAAATTGGAACGAT+CGG + chr5_4:48821671-48821690 None:intergenic 35.0%
TCGTTCCAATTTCAACTCAA+TGG - chr5_4:48821672-48821691 Msa0855510:three_prime_UTR 35.0%
TACCAATTTAGCGTTAAGGT+TGG + chr5_4:48821713-48821732 None:intergenic 35.0%
GAGATACCAATTTAGCGTTA+AGG + chr5_4:48821717-48821736 None:intergenic 35.0%
!! GTTCAATTTCAGGTTCTTCT+TGG - chr5_4:48821818-48821837 Msa0855510:intron 35.0%
CCTTAACAAAACGCAAAACA+AGG + chr5_4:48821868-48821887 None:intergenic 35.0%
!!! CCTTGTTTTGCGTTTTGTTA+AGG - chr5_4:48821865-48821884 Msa0855510:intron 35.0%
TGAATTCAATTGGGTGTTTG+TGG - chr5_4:48821935-48821954 Msa0855510:intron 35.0%
GAATTCAATTGGGTGTTTGT+GGG - chr5_4:48821936-48821955 Msa0855510:intron 35.0%
!!! TATGGTTTTGGAGGTTTGAA+TGG - chr5_4:48822213-48822232 Msa0855510:intron 35.0%
!!! ATGGTTTTGGAGGTTTGAAT+GGG - chr5_4:48822214-48822233 Msa0855510:intron 35.0%
CTCTTTCCATTATGTTTCAG+AGG - chr5_4:48822888-48822907 Msa0855510:intron 35.0%
AAGTTGTTATGTTTCAGTGG+TGG + chr5_4:48823133-48823152 None:intergenic 35.0%
GTGAAGTTGTTATGTTTCAG+TGG + chr5_4:48823136-48823155 None:intergenic 35.0%
ATCCTATGTTCTTAGTGAGT+GGG + chr5_4:48823158-48823177 None:intergenic 35.0%
ACTCACTAAGAACATAGGAT+CGG - chr5_4:48823158-48823177 Msa0855510:intron 35.0%
!! GGTTTTGGTATTTCCTTCAT+TGG + chr5_4:48823239-48823258 None:intergenic 35.0%
! TGTGTAGACAATAGTGGTTT+TGG + chr5_4:48823254-48823273 None:intergenic 35.0%
TTTAGCTGTGTAGACAATAG+TGG + chr5_4:48823260-48823279 None:intergenic 35.0%
TAAACATTGTCTCTGTTACG+TGG + chr5_4:48823373-48823392 None:intergenic 35.0%
ACGTAACAGAGACAATGTTT+AGG - chr5_4:48823372-48823391 Msa0855510:intron 35.0%
AAAGCAGAAACTGGAAAATC+AGG - chr5_4:48823546-48823565 Msa0855510:intron 35.0%
AAGCAGAAACTGGAAAATCA+GGG - chr5_4:48823547-48823566 Msa0855510:intron 35.0%
AAAGGGAAAACCCATGATTA+AGG - chr5_4:48823594-48823613 Msa0855510:intron 35.0%
! TTTGTTCCTTTTCTCTTGTG+GGG + chr5_4:48823658-48823677 None:intergenic 35.0%
ACTGCGTTGCTGAATTTATT+TGG - chr5_4:48824582-48824601 Msa0855510:intron 35.0%
GTGAAACAGGAATCAACAAT+AGG - chr5_4:48824611-48824630 Msa0855510:intron 35.0%
GAAACAGGAATCAACAATAG+GGG - chr5_4:48824613-48824632 Msa0855510:intron 35.0%
CCAAATCTCAAATTTCACTG+TGG + chr5_4:48824675-48824694 None:intergenic 35.0%
! CCACAGTGAAATTTGAGATT+TGG - chr5_4:48824672-48824691 Msa0855510:intron 35.0%
GCACTAAAATATTCCAAGCA+TGG + chr5_4:48824912-48824931 None:intergenic 35.0%
ATTTACACGAGCGAAGAAAT+GGG - chr5_4:48825005-48825024 Msa0855510:CDS 35.0%
!! GAAGCAAGGTATTTTCTGAT+TGG - chr5_4:48825041-48825060 Msa0855510:CDS 35.0%
! GGTCCTTTTGTAACATGTAT+AGG + chr5_4:48825475-48825494 None:intergenic 35.0%
TCAGTTTCACTACACATCAT+AGG - chr5_4:48825682-48825701 Msa0855510:intron 35.0%
TTATCAAATGAAACCATCCC+TGG + chr5_4:48825786-48825805 None:intergenic 35.0%
! ACTTTTATGCTGCTACGTTT+TGG - chr5_4:48825805-48825824 Msa0855510:intron 35.0%
! CTTTTATGCTGCTACGTTTT+GGG - chr5_4:48825806-48825825 Msa0855510:intron 35.0%
TACACAAAGCTATAGAGACT+GGG + chr5_4:48825849-48825868 None:intergenic 35.0%
ATACACAAAGCTATAGAGAC+TGG + chr5_4:48825850-48825869 None:intergenic 35.0%
! CTTTTCTAACCATAACCAAC+CGG - chr5_4:48825876-48825895 Msa0855510:intron 35.0%
AATCCTTTGTACAACCTGAT+TGG - chr5_4:48825947-48825966 Msa0855510:intron 35.0%
ATCCTTTGTACAACCTGATT+GGG - chr5_4:48825948-48825967 Msa0855510:intron 35.0%
AGAACATAAATGTCCCAATC+AGG + chr5_4:48825964-48825983 None:intergenic 35.0%
ACTTGAAGAAGCTCAGATAT+AGG + chr5_4:48826071-48826090 None:intergenic 35.0%
ATGAGAAACTACTTGTTTCG+AGG - chr5_4:48826125-48826144 Msa0855510:intron 35.0%
ATACACTTACTACGTCACAA+GGG + chr5_4:48826222-48826241 None:intergenic 35.0%
TATACACTTACTACGTCACA+AGG + chr5_4:48826223-48826242 None:intergenic 35.0%
TTGTGACGTAGTAAGTGTAT+AGG - chr5_4:48826222-48826241 Msa0855510:intron 35.0%
! CCTTTTCAATAAGCAGTTGT+AGG + chr5_4:48826378-48826397 None:intergenic 35.0%
CCTACAACTGCTTATTGAAA+AGG - chr5_4:48826375-48826394 Msa0855510:intron 35.0%
AGAATCTTCTGTGTTGGAAA+TGG + chr5_4:48826693-48826712 None:intergenic 35.0%
ACTTGAAGAATCTTCTGTGT+TGG + chr5_4:48826699-48826718 None:intergenic 35.0%
CATAAATGTAACTGGCACAT+CGG + chr5_4:48826808-48826827 None:intergenic 35.0%
GATGTGCCAGTTACATTTAT+GGG - chr5_4:48826807-48826826 Msa0855510:intron 35.0%
GTAGTTCCCATAAATGTAAC+TGG + chr5_4:48826816-48826835 None:intergenic 35.0%
TTTATATCAGTCCAAGGAAG+AGG - chr5_4:48827076-48827095 Msa0855510:intron 35.0%
!! ATTTGTGTTGTTTGCACTAC+TGG - chr5_4:48827140-48827159 Msa0855510:intron 35.0%
TCTTCGTATAAGACTGAAGA+AGG - chr5_4:48827330-48827349 Msa0855510:intron 35.0%
CTTCGTATAAGACTGAAGAA+GGG - chr5_4:48827331-48827350 Msa0855510:intron 35.0%
! GTTCACTCATGAACGTTTTA+TGG + chr5_4:48827373-48827392 None:intergenic 35.0%
!! TACAAGTTTTGTCACTCTGT+AGG - chr5_4:48827466-48827485 Msa0855510:intron 35.0%
!! ACAAGTTTTGTCACTCTGTA+GGG - chr5_4:48827467-48827486 Msa0855510:intron 35.0%
TCTCATTCTGTTTAGTGAGA+CGG + chr5_4:48827511-48827530 None:intergenic 35.0%
ACAGAAAACGCGTTTAACTA+AGG + chr5_4:48827984-48828003 None:intergenic 35.0%
! CTGGTTTGAATTATATCCCT+TGG - chr5_4:48828092-48828111 Msa0855510:intron 35.0%
TAGGAAGATTCCACTCAACT+TGG + chr5_4:48821398-48821417 None:intergenic 40.0%
TGAAATTGGAACGATCGGAA+TGG + chr5_4:48821666-48821685 None:intergenic 40.0%
!! CGTAGCCATTGAGTTGAAAT+TGG + chr5_4:48821680-48821699 None:intergenic 40.0%
TTCAACTCAATGGCTACGAT+CGG - chr5_4:48821682-48821701 Msa0855510:three_prime_UTR 40.0%
CACCAACCTTAACGCTAAAT+TGG - chr5_4:48821708-48821727 Msa0855510:three_prime_UTR 40.0%
! TCAGGTTCTTCTTGGTGATA+TGG - chr5_4:48821826-48821845 Msa0855510:intron 40.0%
! CAGGTTCTTCTTGGTGATAT+GGG - chr5_4:48821827-48821846 Msa0855510:intron 40.0%
AACAAAACGCAAAACAAGGC+TGG + chr5_4:48821864-48821883 None:intergenic 40.0%
GGGTCAATTCCTTGAATTTC+AGG - chr5_4:48821886-48821905 Msa0855510:intron 40.0%
AGAATGTATGGTGGTACTTG+TGG - chr5_4:48822306-48822325 Msa0855510:intron 40.0%
GAATGTATGGTGGTACTTGT+GGG - chr5_4:48822307-48822326 Msa0855510:intron 40.0%
TATGAAGCACAAACACCTCT+AGG - chr5_4:48822349-48822368 Msa0855510:intron 40.0%
CGTATGAGTTACATAGGTGT+CGG + chr5_4:48822496-48822515 None:intergenic 40.0%
ACAGCTCGTATGAGTTACAT+AGG + chr5_4:48822502-48822521 None:intergenic 40.0%
ACTCTTGTATTTACGGTGTG+TGG + chr5_4:48822573-48822592 None:intergenic 40.0%
TGCAGTAGAAATGACAGACA+TGG - chr5_4:48822797-48822816 Msa0855510:CDS 40.0%
GCAGTAGAAATGACAGACAT+GGG - chr5_4:48822798-48822817 Msa0855510:intron 40.0%
CAGTAGAAATGACAGACATG+GGG - chr5_4:48822799-48822818 Msa0855510:intron 40.0%
GTGGTATACTACTCACTTTG+TGG + chr5_4:48822850-48822869 None:intergenic 40.0%
!! GGAATGCCTCTGAAACATAA+TGG + chr5_4:48822897-48822916 None:intergenic 40.0%
!!! AGTGACTTGTTTTCAAGGTC+TGG + chr5_4:48823033-48823052 None:intergenic 40.0%
GTTATGTTTCAGTGGTGGTT+TGG + chr5_4:48823128-48823147 None:intergenic 40.0%
GATCCTATGTTCTTAGTGAG+TGG + chr5_4:48823159-48823178 None:intergenic 40.0%
! GCTCCCAGTTTTGCTTATTT+TGG + chr5_4:48823217-48823236 None:intergenic 40.0%
AGCAGAAACTGGAAAATCAG+GGG - chr5_4:48823548-48823567 Msa0855510:intron 40.0%
!! TTTTTACATTAGCGGTGTCG+AGG - chr5_4:48824036-48824055 Msa0855510:CDS 40.0%
CCAAATAGTTCGCTCTTAAC+CGG + chr5_4:48824289-48824308 None:intergenic 40.0%
AAGAATCCGAGTTTGAATCC+TGG - chr5_4:48824309-48824328 Msa0855510:intron 40.0%
! CATCTTTTCCTCGTAAGTAG+TGG + chr5_4:48824452-48824471 None:intergenic 40.0%
TTAGCTCCCATGTACTATAG+AGG - chr5_4:48824725-48824744 Msa0855510:intron 40.0%
AATATTCCAAGCATGGTCTC+TGG + chr5_4:48824905-48824924 None:intergenic 40.0%
CATTTACACGAGCGAAGAAA+TGG - chr5_4:48825004-48825023 Msa0855510:CDS 40.0%
! GTTAAGCAGATTCGACTTGA+AGG - chr5_4:48825358-48825377 Msa0855510:intron 40.0%
TGTTACAAAAGGACCCATTC+TGG - chr5_4:48825480-48825499 Msa0855510:intron 40.0%
!!! ACTCATTCTGGTTTTGTTGC+AGG - chr5_4:48825562-48825581 Msa0855510:intron 40.0%
!!! CTCATTCTGGTTTTGTTGCA+GGG - chr5_4:48825563-48825582 Msa0855510:intron 40.0%
!! AAGCTGACTTGGAAGATAAG+AGG - chr5_4:48825620-48825639 Msa0855510:intron 40.0%
! CGGTTGGTTATGGTTAGAAA+AGG + chr5_4:48825878-48825897 None:intergenic 40.0%
! TCTTCCTTGTTTGAAGATGC+CGG + chr5_4:48825898-48825917 None:intergenic 40.0%
! ACTTGTTTCGAGGCTCATTT+TGG - chr5_4:48826135-48826154 Msa0855510:intron 40.0%
!! TTGGACGAACTTCTAGCTTA+CGG - chr5_4:48826154-48826173 Msa0855510:intron 40.0%
TGACGTAGTAAGTGTATAGG+TGG - chr5_4:48826225-48826244 Msa0855510:intron 40.0%
GACGTAGTAAGTGTATAGGT+GGG - chr5_4:48826226-48826245 Msa0855510:intron 40.0%
AGTGTATAGGTGGGATTTGT+TGG - chr5_4:48826235-48826254 Msa0855510:intron 40.0%
AATCCAGCCCACTTTATTCA+AGG + chr5_4:48826492-48826511 None:intergenic 40.0%
! GAAATGGAGTACTAGGATCT+AGG + chr5_4:48826677-48826696 None:intergenic 40.0%
! TGTGTTGGAAATGGAGTACT+AGG + chr5_4:48826684-48826703 None:intergenic 40.0%
CGATGTGCCAGTTACATTTA+TGG - chr5_4:48826806-48826825 Msa0855510:intron 40.0%
ATTGTACAAGAGTCATGAGC+TGG + chr5_4:48826847-48826866 None:intergenic 40.0%
TCATGACTCTTGTACAATGC+AGG - chr5_4:48826849-48826868 Msa0855510:intron 40.0%
CGTGTATATGCTGAGGAAAA+TGG - chr5_4:48826877-48826896 Msa0855510:intron 40.0%
! CATTTTCTCTTCCTCTTCCT+TGG + chr5_4:48827090-48827109 None:intergenic 40.0%
CAAGGAAGAGGAAGAGAAAA+TGG - chr5_4:48827088-48827107 Msa0855510:intron 40.0%
TTCGTCTGGTGCAAATCAAA+AGG + chr5_4:48827266-48827285 None:intergenic 40.0%
AACAGCCAAGAAGTTACCAA+GGG - chr5_4:48827854-48827873 Msa0855510:intron 40.0%
GAAAACGCGTTTAACTAAGG+TGG + chr5_4:48827981-48828000 None:intergenic 40.0%
TTTGCAGCCCATAAACTTGT+CGG + chr5_4:48828055-48828074 None:intergenic 40.0%
ACGTGTCATACGAGTGTCAT+AGG + chr5_4:48822402-48822421 None:intergenic 45.0%
TACTTCGACACTCCTAAGAC+AGG - chr5_4:48822467-48822486 Msa0855510:intron 45.0%
GTAACTCATACGAGCTGTGT+TGG - chr5_4:48822504-48822523 Msa0855510:intron 45.0%
TCTACTGCATCTTCTAGCCA+GGG + chr5_4:48822786-48822805 None:intergenic 45.0%
TTCTACTGCATCTTCTAGCC+AGG + chr5_4:48822787-48822806 None:intergenic 45.0%
GAAAGAGCAAAGGCAACAAC+AGG + chr5_4:48822875-48822894 None:intergenic 45.0%
CACCCACTCACTAAGAACAT+AGG - chr5_4:48823153-48823172 Msa0855510:intron 45.0%
!! AATCAGAGTCGTGGTGTCAT+AGG + chr5_4:48823292-48823311 None:intergenic 45.0%
AAGACACCCCACAAGAGAAA+AGG - chr5_4:48823649-48823668 Msa0855510:intron 45.0%
CCGGTTAAGAGCGAACTATT+TGG - chr5_4:48824286-48824305 Msa0855510:intron 45.0%
CTACAGCCAGGATTCAAACT+CGG + chr5_4:48824318-48824337 None:intergenic 45.0%
TGGCTAAGAATACTACAGCC+AGG + chr5_4:48824330-48824349 None:intergenic 45.0%
! CTAGAGTACCACTACTTACG+AGG - chr5_4:48824441-48824460 Msa0855510:intron 45.0%
TAGTAGTGTGGGTGCATCAA+TGG - chr5_4:48824497-48824516 Msa0855510:intron 45.0%
! TGTGGGTGCATCAATGGTTT+TGG - chr5_4:48824503-48824522 Msa0855510:intron 45.0%
! GTGGGTGCATCAATGGTTTT+GGG - chr5_4:48824504-48824523 Msa0855510:intron 45.0%
! AGCATTTTTCTCCCAGACGT+TGG - chr5_4:48824637-48824656 Msa0855510:intron 45.0%
GTCATTTACTGCCAACGTCT+GGG + chr5_4:48824651-48824670 None:intergenic 45.0%
! TTTGAGATTTGGGACACAGC+AGG - chr5_4:48824683-48824702 Msa0855510:intron 45.0%
AGTACATGGGAGCTAAGCTA+TGG + chr5_4:48824721-48824740 None:intergenic 45.0%
!!! TTTTCCTTTCTTTAGGGCCC+TGG - chr5_4:48824877-48824896 Msa0855510:intron 45.0%
!! TACCTTGCTTCTGAAGCTCT+TGG + chr5_4:48825032-48825051 None:intergenic 45.0%
TGCTGGTAACAAAGCTGACT+TGG - chr5_4:48825609-48825628 Msa0855510:intron 45.0%
!! TTATGCTGCTACGTTTTGGG+TGG - chr5_4:48825809-48825828 Msa0855510:intron 45.0%
! TTGAAGATGCCGGTTGGTTA+TGG + chr5_4:48825888-48825907 None:intergenic 45.0%
! GTCCCAATCAGGTTGTACAA+AGG + chr5_4:48825953-48825972 None:intergenic 45.0%
!!! GTCACAAGGGCTTTTTCAGT+TGG + chr5_4:48826209-48826228 None:intergenic 45.0%
! AGTTCTACTATCGGTGCTTC+TGG - chr5_4:48826431-48826450 Msa0855510:intron 45.0%
! GTTCTACTATCGGTGCTTCT+GGG - chr5_4:48826432-48826451 Msa0855510:intron 45.0%
ACTCCTTGAATAAAGTGGGC+TGG - chr5_4:48826486-48826505 Msa0855510:intron 45.0%
GGGCTGGATTAATTCGTTGT+TGG - chr5_4:48826502-48826521 Msa0855510:intron 45.0%
CGAATCAAAGCAGCAATGCA+TGG + chr5_4:48826533-48826552 None:intergenic 45.0%
GAGTCATGAGCTGGATAAGT+TGG + chr5_4:48826838-48826857 None:intergenic 45.0%
CACTTCAGCAATACCAGACT+AGG + chr5_4:48827215-48827234 None:intergenic 45.0%
GTCTGGTATTGCTGAAGTGA+AGG - chr5_4:48827216-48827235 Msa0855510:intron 45.0%
GAACAGCCAAGAAGTTACCA+AGG - chr5_4:48827853-48827872 Msa0855510:intron 45.0%
! TTGTGCCCTTGGTAACTTCT+TGG + chr5_4:48827862-48827881 None:intergenic 45.0%
TGAACAACATGATGCAGCTC+TGG + chr5_4:48827937-48827956 None:intergenic 45.0%
CGAAGCTCCGACAAGTTTAT+GGG - chr5_4:48828045-48828064 Msa0855510:five_prime_UTR 45.0%
!! TTAAAATTTAATAATATTGA+TGG - chr5_4:48822133-48822152 Msa0855510:intron 5.0%
!! TGCAAACGCGCTTTTGGTGT+AGG + chr5_4:48821417-48821436 None:intergenic 50.0%
! CTTCTTGGTGATATGGGTGC+TGG - chr5_4:48821833-48821852 Msa0855510:intron 50.0%
!! GCACAAACACCTCTAGGACT+AGG - chr5_4:48822355-48822374 Msa0855510:intron 50.0%
GACACTCGTATGACACGTGT+CGG - chr5_4:48822404-48822423 Msa0855510:intron 50.0%
AGTGTAGCTGCTCCTGCTAT+GGG + chr5_4:48822741-48822760 None:intergenic 50.0%
TAGTGTAGCTGCTCCTGCTA+TGG + chr5_4:48822742-48822761 None:intergenic 50.0%
GCAAAGGCAACAACAGGAAG+TGG + chr5_4:48822869-48822888 None:intergenic 50.0%
GCAAAACTGGGAGCCAATGA+AGG - chr5_4:48823223-48823242 Msa0855510:intron 50.0%
GCTTTGCTGAATCAGAGTCG+TGG + chr5_4:48823301-48823320 None:intergenic 50.0%
ATGAAGCATGGACTCCGACA+CGG + chr5_4:48824065-48824084 None:intergenic 50.0%
CATGGTAATCGAGTTCGACC+GGG + chr5_4:48824367-48824386 None:intergenic 50.0%
CCATGGTAATCGAGTTCGAC+CGG + chr5_4:48824368-48824387 None:intergenic 50.0%
CGGTCGAACTCGATTACCAT+GGG - chr5_4:48824366-48824385 Msa0855510:intron 50.0%
GGTCGAACTCGATTACCATG+GGG - chr5_4:48824367-48824386 Msa0855510:intron 50.0%
CGTCATTTACTGCCAACGTC+TGG + chr5_4:48824652-48824671 None:intergenic 50.0%
GCAGCGCCTCTATAGTACAT+GGG + chr5_4:48824734-48824753 None:intergenic 50.0%
AGCAGCGCCTCTATAGTACA+TGG + chr5_4:48824735-48824754 None:intergenic 50.0%
GTCCAAGAGCTTCAGAAGCA+AGG - chr5_4:48825027-48825046 Msa0855510:CDS 50.0%
TGTTGCAGGGAATCCGAACA+TGG - chr5_4:48825576-48825595 Msa0855510:intron 50.0%
GCAAAAGCCACGACCATGTT+CGG + chr5_4:48825592-48825611 None:intergenic 50.0%
! AACATGGTCGTGGCTTTTGC+TGG - chr5_4:48825592-48825611 Msa0855510:intron 50.0%
! CCTTGTTTGAAGATGCCGGT+TGG + chr5_4:48825894-48825913 None:intergenic 50.0%
CCAACCGGCATCTTCAAACA+AGG - chr5_4:48825891-48825910 Msa0855510:intron 50.0%
! GGAAGCACGTGTATATGCTG+AGG - chr5_4:48826870-48826889 Msa0855510:intron 50.0%
CAACAAGAACCATCCCTGCT+GGG + chr5_4:48827896-48827915 None:intergenic 50.0%
TCAACAAGAACCATCCCTGC+TGG + chr5_4:48827897-48827916 None:intergenic 50.0%
! CTTGTTGATAGACCTGCCGA+AGG - chr5_4:48827909-48827928 Msa0855510:intron 50.0%
! TGATGCAGCTCTGGTTCCTT+CGG + chr5_4:48827928-48827947 None:intergenic 50.0%
GCGAAGCTCCGACAAGTTTA+TGG - chr5_4:48828044-48828063 Msa0855510:five_prime_UTR 50.0%
! CTTGCGTGCAAACGCGCTTT+TGG + chr5_4:48821423-48821442 None:intergenic 55.0%
!! CTCTAGGACTAGGTGTGTCG+CGG - chr5_4:48822365-48822384 Msa0855510:intron 55.0%
ACGTGTCGGACAGCTATGAC+TGG - chr5_4:48822418-48822437 Msa0855510:intron 55.0%
!! AGGTGTCGGACACCTGTCTT+AGG + chr5_4:48822482-48822501 None:intergenic 55.0%
! AGGAGCAGCTACACTAGCCT+GGG - chr5_4:48822746-48822765 Msa0855510:CDS 55.0%
CCGGTCGAACTCGATTACCA+TGG - chr5_4:48824365-48824384 Msa0855510:intron 55.0%
TCTTAACCCTCCGGTTCCCA+GGG + chr5_4:48824399-48824418 None:intergenic 55.0%
!! AAGCATGGTCTCTGGAGCCA+GGG + chr5_4:48824897-48824916 None:intergenic 55.0%
AGGGAATCCGAACATGGTCG+TGG - chr5_4:48825582-48825601 Msa0855510:intron 55.0%
!!! TTTTGCGCTGGTTGTGCCCT+TGG + chr5_4:48827873-48827892 None:intergenic 55.0%
AACCAGCGCAAAACCCAGCA+GGG - chr5_4:48827880-48827899 Msa0855510:intron 55.0%
CGCGACACACCTAGTCCTAG+AGG + chr5_4:48822367-48822386 None:intergenic 60.0%
GGAGGAGCAGAACCCATAGC+AGG - chr5_4:48822726-48822745 Msa0855510:CDS 60.0%
CAGGAGCAGCTACACTAGCC+TGG - chr5_4:48822745-48822764 Msa0855510:CDS 60.0%
! AGCAGCTACACTAGCCTGGG+AGG - chr5_4:48822749-48822768 Msa0855510:CDS 60.0%
! ACACTAGCCTGGGAGGACTC+AGG - chr5_4:48822756-48822775 Msa0855510:CDS 60.0%
TTACCATGGGGCCTTTCCCC+TGG - chr5_4:48824379-48824398 Msa0855510:intron 60.0%
TACCATGGGGCCTTTCCCCT+GGG - chr5_4:48824380-48824399 Msa0855510:intron 60.0%
CTTAACCCTCCGGTTCCCAG+GGG + chr5_4:48824398-48824417 None:intergenic 60.0%
GTCTTAACCCTCCGGTTCCC+AGG + chr5_4:48824400-48824419 None:intergenic 60.0%
GGAGCCAGGGCCCTAAAGAA+AGG + chr5_4:48824884-48824903 None:intergenic 60.0%
!! CAAGCATGGTCTCTGGAGCC+AGG + chr5_4:48824898-48824917 None:intergenic 60.0%
CTGGCTCCAGAGACCATGCT+TGG - chr5_4:48824896-48824915 Msa0855510:intron 60.0%
CAACCAGCGCAAAACCCAGC+AGG - chr5_4:48827879-48827898 Msa0855510:intron 60.0%
! ATCCCTGCTGGGTTTTGCGC+TGG + chr5_4:48827885-48827904 None:intergenic 60.0%
AGCGCAAAACCCAGCAGGGA+TGG - chr5_4:48827884-48827903 Msa0855510:intron 60.0%
GGGATCACCTGAGTCCTCCC+AGG + chr5_4:48822766-48822785 None:intergenic 65.0%
GGGAGGACTCAGGTGATCCC+TGG - chr5_4:48822766-48822785 Msa0855510:CDS 65.0%
! CGGTGTCGAGGTGTCCGTGT+CGG - chr5_4:48824048-48824067 Msa0855510:CDS 65.0%
TTCCCAGGGGAAAGGCCCCA+TGG + chr5_4:48824385-48824404 None:intergenic 65.0%
CCTTTCCCCTGGGAACCGGA+GGG - chr5_4:48824390-48824409 Msa0855510:intron 65.0%
! GCAGCTCTGGTTCCTTCGGC+AGG + chr5_4:48827924-48827943 None:intergenic 65.0%
GGGGCCTTTCCCCTGGGAAC+CGG - chr5_4:48824386-48824405 Msa0855510:intron 70.0%
GCCTTTCCCCTGGGAACCGG+AGG - chr5_4:48824389-48824408 Msa0855510:intron 70.0%
CCCTCCGGTTCCCAGGGGAA+AGG + chr5_4:48824393-48824412 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 48821394 48828293 48821394 ID=Msa0855510;Name=Msa0855510
chr5_4 mRNA 48821394 48828293 48821394 ID=Msa0855510-mRNA-1;Parent=Msa0855510;Name=Msa0855510-mRNA-1;_AED=0.09;_eAED=0.09;_QI=197|1|1|1|0.75|0.55|9|312|200
chr5_4 exon 48821394 48821570 48821394 ID=Msa0855510-mRNA-1:exon:15457;Parent=Msa0855510-mRNA-1
chr5_4 exon 48821593 48821828 48821593 ID=Msa0855510-mRNA-1:exon:15456;Parent=Msa0855510-mRNA-1
chr5_4 exon 48822723 48822816 48822723 ID=Msa0855510-mRNA-1:exon:15455;Parent=Msa0855510-mRNA-1
chr5_4 exon 48824030 48824103 48824030 ID=Msa0855510-mRNA-1:exon:15454;Parent=Msa0855510-mRNA-1
chr5_4 exon 48824639 48824687 48824639 ID=Msa0855510-mRNA-1:exon:15453;Parent=Msa0855510-mRNA-1
chr5_4 exon 48824900 48825067 48824900 ID=Msa0855510-mRNA-1:exon:15452;Parent=Msa0855510-mRNA-1
chr5_4 exon 48827780 48827857 48827780 ID=Msa0855510-mRNA-1:exon:15451;Parent=Msa0855510-mRNA-1
chr5_4 exon 48827958 48828064 48827958 ID=Msa0855510-mRNA-1:exon:15450;Parent=Msa0855510-mRNA-1
chr5_4 exon 48828165 48828293 48828165 ID=Msa0855510-mRNA-1:exon:15449;Parent=Msa0855510-mRNA-1
chr5_4 five_prime_UTR 48828165 48828293 48828165 ID=Msa0855510-mRNA-1:five_prime_utr;Parent=Msa0855510-mRNA-1
chr5_4 five_prime_UTR 48827997 48828064 48827997 ID=Msa0855510-mRNA-1:five_prime_utr;Parent=Msa0855510-mRNA-1
chr5_4 CDS 48827958 48827996 48827958 ID=Msa0855510-mRNA-1:cds;Parent=Msa0855510-mRNA-1
chr5_4 CDS 48827780 48827857 48827780 ID=Msa0855510-mRNA-1:cds;Parent=Msa0855510-mRNA-1
chr5_4 CDS 48824900 48825067 48824900 ID=Msa0855510-mRNA-1:cds;Parent=Msa0855510-mRNA-1
chr5_4 CDS 48824639 48824687 48824639 ID=Msa0855510-mRNA-1:cds;Parent=Msa0855510-mRNA-1
chr5_4 CDS 48824030 48824103 48824030 ID=Msa0855510-mRNA-1:cds;Parent=Msa0855510-mRNA-1
chr5_4 CDS 48822723 48822816 48822723 ID=Msa0855510-mRNA-1:cds;Parent=Msa0855510-mRNA-1
chr5_4 CDS 48821728 48821828 48821728 ID=Msa0855510-mRNA-1:cds;Parent=Msa0855510-mRNA-1
chr5_4 three_prime_UTR 48821593 48821727 48821593 ID=Msa0855510-mRNA-1:three_prime_utr;Parent=Msa0855510-mRNA-1
chr5_4 three_prime_UTR 48821394 48821570 48821394 ID=Msa0855510-mRNA-1:three_prime_utr;Parent=Msa0855510-mRNA-1
Gene Sequence

>Msa0855510

ATGGCTACGATCGGACACACCAACCTTAACGCTAAATTGGTTCTTCTTGGTGATATGGGTGCTGGAAAATCCAGCCTTGTTTTGCGTTTTGTTAAGGGTCAATTCCTTGAATTTCAGGAATCAACAATAGGGGCAGCATTTTTCTCCCAGACGTTGGCAGTAAATGACGCCACAGTGAAATTTGAGATTTGGGACACAGCAGGACAAGAGAGATACCATAGCTTAGCTCCCATGTACTATAGAGGCGCTGCTGCTGCTATCATTGTCTATGATATTACTAACTTGGAGTCATTTACACGAGCGAAGAAATGGGTCCAAGAGCTTCAGAAGCAAGGGAATCCGAACATGGTCGTGGCTTTTGCTGGTAACAAAGCTGACTTGGAAGATAAGAGGAAAGTGACAGCTGAAGAAGCACGTGTATATGCTGAGGAAAATGGTCTGTTTTTCATAGAGACGTCTGCGAAAACTGCAGCCAATGTTAATGACATATTTTATGAAATAGCCAAGAAGTTACCAAGGGCACAACCAGCGCAAAACCCAGCAGGGATGGTTCTTGTTGATAGACCTGCCGAAGGAACCAGAGCTGCATCATGTTGTTCATAA
Protein sequence

>Msa0855510

MATIGHTNLNAKLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNLESFTRAKKWVQELQKQGNPNMVVAFAGNKADLEDKRKVTAEEARVYAEENGLFFIETSAKTAANVNDIFYEIAKKLPRAQPAQNPAGMVLVDRPAEGTRAASCCS*