Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0857160 | XP_003617235.2 | 94.508 | 437 | 24 | 0 | 1 | 437 | 1 | 437 | 0.0 | 763 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0857160 | sp|Q8RWL5|CLT3_ARATH | 63.351 | 382 | 133 | 2 | 58 | 433 | 64 | 444 | 1.02e-163 | 471 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0857160 | G7K322 | 94.508 | 437 | 24 | 0 | 1 | 437 | 1 | 437 | 0.0 | 763 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0740840 | Msa0857160 | 0.998420 | 1.516588e-264 | -8.615850e-47 |
| Msa0821430 | Msa0857160 | 0.982621 | 1.449660e-155 | -8.615850e-47 |
| Msa0200840 | Msa0857160 | 0.801321 | 9.515893e-49 | -8.615850e-47 |
| Msa0243470 | Msa0857160 | 0.802919 | 4.464522e-49 | -8.615850e-47 |
| Msa0281940 | Msa0857160 | 0.804992 | 1.655080e-49 | -8.615850e-47 |
| Msa0857160 | Msa1322420 | 0.810506 | 1.114524e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0857160 | MtrunA17_Chr5g0441721 | 94.508 | 437 | 24 | 0 | 1 | 437 | 1 | 437 | 0.0 | 763 |
| Msa0857160 | MtrunA17_Chr0c02g0489751 | 72.018 | 436 | 112 | 4 | 1 | 433 | 1 | 429 | 0.0 | 558 |
| Msa0857160 | MtrunA17_Chr3g0132621 | 55.522 | 335 | 147 | 2 | 96 | 428 | 85 | 419 | 2.14e-124 | 367 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0857160 | AT5G12170.2 | 63.351 | 382 | 133 | 2 | 58 | 433 | 64 | 444 | 1.04e-164 | 471 |
| Msa0857160 | AT5G19380.1 | 64.973 | 374 | 128 | 2 | 57 | 430 | 69 | 439 | 2.43e-160 | 460 |
| Msa0857160 | AT5G19380.2 | 66.780 | 295 | 98 | 0 | 136 | 430 | 205 | 499 | 2.19e-130 | 386 |
| Msa0857160 | AT4G24460.2 | 56.364 | 330 | 142 | 1 | 104 | 431 | 102 | 431 | 2.34e-114 | 342 |
| Msa0857160 | AT4G24460.1 | 56.364 | 330 | 142 | 1 | 104 | 431 | 102 | 431 | 2.34e-114 | 342 |
| Msa0857160 | AT4G24460.4 | 55.634 | 284 | 126 | 0 | 136 | 419 | 6 | 289 | 1.07e-93 | 285 |
| Msa0857160 | AT5G12170.3 | 60.569 | 246 | 90 | 2 | 58 | 297 | 64 | 308 | 2.39e-91 | 279 |
| Msa0857160 | AT4G24460.3 | 56.186 | 194 | 85 | 0 | 104 | 297 | 102 | 295 | 1.50e-66 | 215 |
Find 153 sgRNAs with CRISPR-Local
Find 358 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCCTAGCTTACACAAAATT+TGG | 0.126114 | 5_4:+52472094 | None:intergenic |
| AAGACTCCATTTGTTGTTAT+TGG | 0.159759 | 5_4:-52476393 | Msa0857160:CDS |
| TAAAGGACGGTGGCTTATTT+TGG | 0.186757 | 5_4:-52474353 | Msa0857160:CDS |
| ATTTGTTGTTATTGGTCTTT+TGG | 0.188057 | 5_4:-52476385 | Msa0857160:CDS |
| AGATATGTGATTGTGTATTT+TGG | 0.200886 | 5_4:-52476474 | Msa0857160:CDS |
| TTGCACAGCTTTCCACTTTC+GGG | 0.212317 | 5_4:-52477159 | Msa0857160:intron |
| TCCCATTCTTGTCAAAACTA+TGG | 0.225545 | 5_4:-52473513 | Msa0857160:CDS |
| CTGTTCGTTGTCAACTCTTA+TGG | 0.240713 | 5_4:-52473696 | Msa0857160:CDS |
| CTTGCACAGCTTTCCACTTT+CGG | 0.251818 | 5_4:-52477160 | Msa0857160:CDS |
| TTGATAATGTACCAACATTT+AGG | 0.260945 | 5_4:+52473437 | None:intergenic |
| CGCGGCGGCGACGGTTGTAA+TGG | 0.297085 | 5_4:-52477245 | Msa0857160:CDS |
| CCGCCGGAGACGGCGGCGCA+CGG | 0.298678 | 5_4:-52477378 | Msa0857160:CDS |
| CTTCCCACAGGCTTTGTGGC+AGG | 0.306335 | 5_4:-52472332 | Msa0857160:CDS |
| GGGGCCATAGTTCTCATTAT+TGG | 0.308845 | 5_4:-52472311 | Msa0857160:CDS |
| GAGGCTCTTGCTGCTGCAAC+TGG | 0.308990 | 5_4:-52476363 | Msa0857160:CDS |
| TTTAATGAATTTCCAGTATC+AGG | 0.315711 | 5_4:+52474372 | None:intergenic |
| TGATACTGGAAATTCATTAA+AGG | 0.316399 | 5_4:-52474370 | Msa0857160:CDS |
| AAGCTAGGAAAGTAAATAAA+AGG | 0.323580 | 5_4:-52472081 | Msa0857160:three_prime_UTR |
| TCGTTTACCTGAGACAAAAT+TGG | 0.328986 | 5_4:+52475671 | None:intergenic |
| ACTCCTTCAAATGGCTCTTC+AGG | 0.336839 | 5_4:-52472269 | Msa0857160:CDS |
| ATAACAACAAATGGAGTCTT+TGG | 0.340786 | 5_4:+52476396 | None:intergenic |
| AAATTGCTTGTAGGTATTCA+TGG | 0.343979 | 5_4:-52472173 | Msa0857160:three_prime_UTR |
| CCGCCGTGCGCCGCCGTCTC+CGG | 0.345744 | 5_4:+52477375 | None:intergenic |
| GGCGGAGGTGGCGGTGGCCG+CGG | 0.349139 | 5_4:-52477263 | Msa0857160:CDS |
| TTCCCACAGGCTTTGTGGCA+GGG | 0.353313 | 5_4:-52472331 | Msa0857160:CDS |
| TCCCACAGGCTTTGTGGCAG+GGG | 0.361321 | 5_4:-52472330 | Msa0857160:CDS |
| CAACAGCTGAAGAGATCTTC+AGG | 0.361777 | 5_4:+52472964 | None:intergenic |
| TATTGTAGCGGACCTGATAC+TGG | 0.366113 | 5_4:-52474384 | Msa0857160:intron |
| GCACCATCTTTGAGGTAGTT+TGG | 0.368224 | 5_4:+52473469 | None:intergenic |
| GGATGCTTTCTTGTCACAAT+TGG | 0.372054 | 5_4:-52475201 | Msa0857160:CDS |
| ATCTCTTCCCACAGGCTTTG+TGG | 0.374738 | 5_4:-52472336 | Msa0857160:CDS |
| AGTGCAATGGCTCCGGCGTC+TGG | 0.376674 | 5_4:+52477517 | None:intergenic |
| AAACTCAATAAATTGCTTGT+AGG | 0.377937 | 5_4:-52472182 | Msa0857160:three_prime_UTR |
| TTGACGGTGGTTGGCGCCGC+CGG | 0.385640 | 5_4:-52477394 | Msa0857160:CDS |
| AGATGATCACTGGGGATTGC+CGG | 0.386307 | 5_4:-52477465 | Msa0857160:CDS |
| GTGAACACATAGATGGATAT+TGG | 0.390660 | 5_4:+52472389 | None:intergenic |
| GGCGGTGGCCGCGGCGGCGA+CGG | 0.392280 | 5_4:-52477254 | Msa0857160:CDS |
| TCGAGTGATAAAGAAAGAAT+AGG | 0.409895 | 5_4:-52472137 | Msa0857160:three_prime_UTR |
| CCCATTCTTGTCAAAACTAT+GGG | 0.411426 | 5_4:-52473512 | Msa0857160:CDS |
| GAGACGGCGGCGCACGGCGG+AGG | 0.415036 | 5_4:-52477372 | Msa0857160:CDS |
| TAAGCCAATAATGAGAACTA+TGG | 0.415658 | 5_4:+52472307 | None:intergenic |
| GCGGCGGCGACGGTTGTAAT+GGG | 0.419993 | 5_4:-52477244 | Msa0857160:CDS |
| AAAAGACCAATAACAACAAA+TGG | 0.431999 | 5_4:+52476387 | None:intergenic |
| TAGACCGGCGGAGGTGGCGG+TGG | 0.432581 | 5_4:-52477269 | Msa0857160:CDS |
| GGGGATTGCCGGATCAGATA+TGG | 0.433968 | 5_4:-52477454 | Msa0857160:CDS |
| TCAACGTCCTCGTCGGCTGA+TGG | 0.437154 | 5_4:+52477425 | None:intergenic |
| CCGTGCGCCGCCGTCTCCGG+CGG | 0.439533 | 5_4:+52477378 | None:intergenic |
| GGAGCCATTGCACTGCCTGC+CGG | 0.445621 | 5_4:-52477508 | Msa0857160:CDS |
| CGAGTGATAAAGAAAGAATA+GGG | 0.447270 | 5_4:-52472136 | Msa0857160:three_prime_UTR |
| GGAAATAACCATATCTGATC+CGG | 0.447859 | 5_4:+52477446 | None:intergenic |
| GCTGCAACTGGAATGGCTGC+AGG | 0.449008 | 5_4:-52476351 | Msa0857160:CDS |
| TTGAAGTGTGAACACATAGA+TGG | 0.456602 | 5_4:+52472382 | None:intergenic |
| CGGCGACCGGAGATGATCAC+TGG | 0.462043 | 5_4:-52477475 | Msa0857160:CDS |
| GTTGCTTCATCTCTTCCCAC+AGG | 0.462258 | 5_4:-52472344 | Msa0857160:CDS |
| AGTTCTTTATAAGTTAGCTT+TGG | 0.464508 | 5_4:-52477209 | Msa0857160:CDS |
| GCGGCCACCGCCACCTCCGC+CGG | 0.464520 | 5_4:+52477265 | None:intergenic |
| TATAAAGTCAACCACCTACT+TGG | 0.466036 | 5_4:-52475222 | Msa0857160:CDS |
| TCAGGTGCTTCCTTCTCAGA+GGG | 0.466708 | 5_4:-52472251 | Msa0857160:CDS |
| TGCAATTACGCGGTGAAGGA+TGG | 0.466759 | 5_4:-52477331 | Msa0857160:CDS |
| GAATAGACCGGCGGAGGTGG+CGG | 0.470748 | 5_4:-52477272 | Msa0857160:CDS |
| GTGGTTGGCGCCGCCGGAGA+CGG | 0.470884 | 5_4:-52477388 | Msa0857160:CDS |
| CGGCGGCGCACGGCGGAGGA+AGG | 0.473061 | 5_4:-52477368 | Msa0857160:CDS |
| TCTTGTATCAGCAATTCTCT+CGG | 0.477060 | 5_4:-52475705 | Msa0857160:intron |
| TTGACAAGAATGGGAGAAGA+AGG | 0.477200 | 5_4:+52473521 | None:intergenic |
| CGCCGGAGTCTAACGCCGGC+AGG | 0.479007 | 5_4:+52477493 | None:intergenic |
| GGAGGTGGCGGTGGCCGCGG+CGG | 0.480169 | 5_4:-52477260 | Msa0857160:CDS |
| CGGTGAAGGATGGGAGTGTA+GGG | 0.481678 | 5_4:-52477321 | Msa0857160:CDS |
| TGTGAATAGACCGGCGGAGG+TGG | 0.488796 | 5_4:-52477275 | Msa0857160:CDS |
| ATGTATATTCGGCACCGTGC+CGG | 0.489380 | 5_4:-52476447 | Msa0857160:CDS |
| TCTTGCTGCTGCAACTGGAA+TGG | 0.490220 | 5_4:-52476358 | Msa0857160:CDS |
| CTTGTATCAGCAATTCTCTC+GGG | 0.491191 | 5_4:-52475704 | Msa0857160:intron |
| CCGGAGACGGCGGCGCACGG+CGG | 0.496318 | 5_4:-52477375 | Msa0857160:CDS |
| GAGAATTTGCCACACTAGAA+AGG | 0.497884 | 5_4:+52475272 | None:intergenic |
| ACGGCGGAGGAAGGAGAAGG+TGG | 0.502616 | 5_4:-52477359 | Msa0857160:CDS |
| GGCAGGCAGTGCAATGGCTC+CGG | 0.507027 | 5_4:+52477510 | None:intergenic |
| GTTGGCGCCGCCGGAGACGG+CGG | 0.507263 | 5_4:-52477385 | Msa0857160:CDS |
| TCAGCACGGTATCGGCTGCT+TGG | 0.507266 | 5_4:+52474301 | None:intergenic |
| GAAAGCTGTGCAAGGAAGAA+AGG | 0.510496 | 5_4:+52477169 | None:intergenic |
| GTGAATGAAGTACCCGAAAG+TGG | 0.514168 | 5_4:+52477147 | None:intergenic |
| GTAGGGAATGATGACGTGGC+GGG | 0.516833 | 5_4:-52477304 | Msa0857160:CDS |
| TATGCATGGACTCCTTCAAA+TGG | 0.517222 | 5_4:-52472278 | Msa0857160:CDS |
| CTGTTTATTATTGTAAACAT+TGG | 0.519611 | 5_4:-52473011 | Msa0857160:CDS |
| GCGGTGAAGGATGGGAGTGT+AGG | 0.519743 | 5_4:-52477322 | Msa0857160:CDS |
| CGGCGGAGGAAGGAGAAGGT+GGG | 0.520169 | 5_4:-52477358 | Msa0857160:CDS |
| CGGCGTTAGACTCCGGCGAC+CGG | 0.520644 | 5_4:-52477488 | Msa0857160:CDS |
| CATAAGAGTTGACAACGAAC+AGG | 0.522858 | 5_4:+52473697 | None:intergenic |
| GGCCCCTGCCACAAAGCCTG+TGG | 0.527028 | 5_4:+52472328 | None:intergenic |
| GCAATTACGCGGTGAAGGAT+GGG | 0.527191 | 5_4:-52477330 | Msa0857160:CDS |
| AAGAAAGGATACTGTTTCAA+AGG | 0.529790 | 5_4:+52477184 | None:intergenic |
| AGCAAGCTGCACCATCTTTG+AGG | 0.533343 | 5_4:+52473461 | None:intergenic |
| TTGGCTTACTCATTTATGCA+TGG | 0.535760 | 5_4:-52472292 | Msa0857160:CDS |
| AGTAACCTTCAGCACGGTAT+CGG | 0.535809 | 5_4:+52474293 | None:intergenic |
| CGCACGGCGGAGGAAGGAGA+AGG | 0.538599 | 5_4:-52477362 | Msa0857160:CDS |
| CAGTGATCATCTCCGGTCGC+CGG | 0.541396 | 5_4:+52477476 | None:intergenic |
| GCACCTGAAGAGCCATTTGA+AGG | 0.541423 | 5_4:+52472266 | None:intergenic |
| ACACTTCAATTGCCATACCT+TGG | 0.541912 | 5_4:-52472368 | Msa0857160:CDS |
| TTCAGGTGCTTCCTTCTCAG+AGG | 0.546205 | 5_4:-52472252 | Msa0857160:CDS |
| TTCATTCTCAACGTCCTCGT+CGG | 0.549038 | 5_4:+52477418 | None:intergenic |
| GTGTAGTTGTTACCGTTGCA+AGG | 0.552088 | 5_4:-52475179 | Msa0857160:intron |
| CTACCAAACTACCTCAAAGA+TGG | 0.556527 | 5_4:-52473472 | Msa0857160:CDS |
| GTAGTTTGGTAGTTGACTGA+AGG | 0.556646 | 5_4:+52473483 | None:intergenic |
| TATCGATGGCATCATTCTGC+CGG | 0.559396 | 5_4:-52477546 | Msa0857160:exon |
| AGAATGAAGTTGACGGTGGT+TGG | 0.560700 | 5_4:-52477403 | Msa0857160:CDS |
| GACATGCAATTACGCGGTGA+AGG | 0.565552 | 5_4:-52477335 | Msa0857160:CDS |
| CAATCCCCAGTGATCATCTC+CGG | 0.565924 | 5_4:+52477469 | None:intergenic |
| TGTTGCAGACCTTTCTAGTG+TGG | 0.566972 | 5_4:-52475281 | Msa0857160:intron |
| TCTTTGATTCCAGGGTGTGA+CGG | 0.569736 | 5_4:-52473053 | Msa0857160:intron |
| AGCAGCCGATACCGTGCTGA+AGG | 0.570183 | 5_4:-52474298 | Msa0857160:intron |
| GGCGGAGGAAGGAGAAGGTG+GGG | 0.572145 | 5_4:-52477357 | Msa0857160:CDS |
| GATGAAGCAACACCAAGGTA+TGG | 0.572926 | 5_4:+52472356 | None:intergenic |
| GCAGCTTGCTTCCTAAATGT+TGG | 0.573025 | 5_4:-52473448 | Msa0857160:CDS |
| TGCCTGCCGGCGTTAGACTC+CGG | 0.581411 | 5_4:-52477495 | Msa0857160:CDS |
| GCGACGGTTGTAATGGGTGT+CGG | 0.583233 | 5_4:-52477238 | Msa0857160:CDS |
| CTCCGGCGTCTGGACACCGC+CGG | 0.583465 | 5_4:+52477527 | None:intergenic |
| AACGCCGGCAGGCAGTGCAA+TGG | 0.586163 | 5_4:+52477504 | None:intergenic |
| GGCGACCGGAGATGATCACT+GGG | 0.587690 | 5_4:-52477474 | Msa0857160:CDS |
| GAGTGTGAATAGACCGGCGG+AGG | 0.592555 | 5_4:-52477278 | Msa0857160:CDS |
| TGCCGGCGGTGTCCAGACGC+CGG | 0.593683 | 5_4:-52477529 | Msa0857160:CDS |
| ATAAACAGCAATGGCAGCAG+AGG | 0.594415 | 5_4:+52473026 | None:intergenic |
| TAGTTTGGTAGTTGACTGAA+GGG | 0.594534 | 5_4:+52473484 | None:intergenic |
| GGGGAAGAGTGTGAATAGAC+CGG | 0.594697 | 5_4:-52477284 | Msa0857160:CDS |
| GACGTTGAGAATGAAGTTGA+CGG | 0.595919 | 5_4:-52477410 | Msa0857160:CDS |
| GCCCCTGCCACAAAGCCTGT+GGG | 0.604936 | 5_4:+52472329 | None:intergenic |
| CGAAAGTGGAAAGCTGTGCA+AGG | 0.606489 | 5_4:+52477161 | None:intergenic |
| CTAGGTGGAACCCTCTGAGA+AGG | 0.607300 | 5_4:+52472241 | None:intergenic |
| CATCAGTAACAATGCCGGCA+CGG | 0.607826 | 5_4:+52476433 | None:intergenic |
| CAGAGGGTTCCACCTAGAGA+AGG | 0.612923 | 5_4:-52472235 | Msa0857160:exon |
| CATCTCATCAGTAACAATGC+CGG | 0.616732 | 5_4:+52476428 | None:intergenic |
| AATGTTGGTACATTATCAAG+TGG | 0.627459 | 5_4:-52473433 | Msa0857160:intron |
| GTTATTTCCATCAGCCGACG+AGG | 0.629110 | 5_4:-52477432 | Msa0857160:CDS |
| TCTGAAACAGGGAGGCTCTG+TGG | 0.630457 | 5_4:-52473721 | Msa0857160:intron |
| CGGTCGCCGGAGTCTAACGC+CGG | 0.631086 | 5_4:+52477489 | None:intergenic |
| AAGCATACCTGAAAATGTTG+AGG | 0.633878 | 5_4:+52472929 | None:intergenic |
| TTTACAATAATAAACAGCAA+TGG | 0.640298 | 5_4:+52473017 | None:intergenic |
| TAGGGAATGATGACGTGGCG+GGG | 0.641648 | 5_4:-52477303 | Msa0857160:CDS |
| CAAGAAAGCATCCAAGTAGG+TGG | 0.647090 | 5_4:+52475211 | None:intergenic |
| TGACAAGAAAGCATCCAAGT+AGG | 0.647786 | 5_4:+52475208 | None:intergenic |
| CATTACAACCGTCGCCGCCG+CGG | 0.647840 | 5_4:+52477246 | None:intergenic |
| ATGTATCACTGACCTTGCAA+CGG | 0.648270 | 5_4:+52475167 | None:intergenic |
| ACTGGAAATTCATTAAAGGA+CGG | 0.650319 | 5_4:-52474366 | Msa0857160:CDS |
| CGATGGCATCATTCTGCCGG+CGG | 0.658648 | 5_4:-52477543 | Msa0857160:CDS |
| GGAAATTCATTAAAGGACGG+TGG | 0.668567 | 5_4:-52474363 | Msa0857160:CDS |
| TGTAGGGAATGATGACGTGG+CGG | 0.671419 | 5_4:-52477305 | Msa0857160:CDS |
| CCATTCTTGTCAAAACTATG+GGG | 0.672749 | 5_4:-52473511 | Msa0857160:CDS |
| GCAACTGGAATGGCTGCAGG+AGG | 0.677069 | 5_4:-52476348 | Msa0857160:intron |
| AGTTTGGTAGTTGACTGAAG+GGG | 0.683364 | 5_4:+52473485 | None:intergenic |
| GAGTGTAGGGAATGATGACG+TGG | 0.720545 | 5_4:-52477308 | Msa0857160:CDS |
| GAAGAGTGTGAATAGACCGG+CGG | 0.721952 | 5_4:-52477281 | Msa0857160:CDS |
| GAAGACAGTAACCTTCAGCA+CGG | 0.723923 | 5_4:+52474287 | None:intergenic |
| GAAGAGATGAAGCAACACCA+AGG | 0.727287 | 5_4:+52472351 | None:intergenic |
| GGTGGGGACATGCAATTACG+CGG | 0.728350 | 5_4:-52477341 | Msa0857160:CDS |
| GTTGAGAATGAAGTTGACGG+TGG | 0.771797 | 5_4:-52477407 | Msa0857160:CDS |
| GCGACCGGAGATGATCACTG+GGG | 0.824046 | 5_4:-52477473 | Msa0857160:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATACATGTTAATTTTTTTAA+GGG | - | chr5_4:52474572-52474591 | Msa0857160:intron | 10.0% |
| !!! | TTTTAAACAAATTTTTTCTA+TGG | - | chr5_4:52475483-52475502 | Msa0857160:intron | 10.0% |
| !!! | ATAATCTAATTTTTTATCGA+TGG | - | chr5_4:52472162-52472181 | Msa0857160:three_prime_UTR | 15.0% |
| !! | GTACAAAAATTATTATTTAG+TGG | - | chr5_4:52472697-52472716 | Msa0857160:intron | 15.0% |
| !! | ATATTCAAGGATTAAAATAA+AGG | + | chr5_4:52473167-52473186 | None:intergenic | 15.0% |
| !! | AAATTTGAATTAAACAAACT+TGG | - | chr5_4:52474353-52474372 | Msa0857160:CDS | 15.0% |
| !!! | GATACATGTTAATTTTTTTA+AGG | - | chr5_4:52474571-52474590 | Msa0857160:intron | 15.0% |
| !! | AAATAGTGGTATAAATAAAA+AGG | + | chr5_4:52475316-52475335 | None:intergenic | 15.0% |
| !!! | AAAAATTTGTTTAAAAGTTG+AGG | + | chr5_4:52475479-52475498 | None:intergenic | 15.0% |
| !!! | TTAGTAATATTGTTTTCAAA+AGG | + | chr5_4:52475776-52475795 | None:intergenic | 15.0% |
| !! | CTATAAAAGATATGATAATA+TGG | + | chr5_4:52476333-52476352 | None:intergenic | 15.0% |
| !!! | TATCTTTTATAGATCAATTT+TGG | - | chr5_4:52476341-52476360 | Msa0857160:intron | 15.0% |
| !! | TAATATACTAACATTCTTAT+GGG | + | chr5_4:52476375-52476394 | None:intergenic | 15.0% |
| !! | AAAACTAAGAATACAAAATT+AGG | + | chr5_4:52476617-52476636 | None:intergenic | 15.0% |
| !!! | AATTGAATTTTGGTATATTT+AGG | - | chr5_4:52477036-52477055 | Msa0857160:intron | 15.0% |
| !!! | ATTGAATTTTGGTATATTTA+GGG | - | chr5_4:52477037-52477056 | Msa0857160:intron | 15.0% |
| !!! | TGTTTACACCTTATTTTTTT+AGG | - | chr5_4:52472672-52472691 | Msa0857160:intron | 20.0% |
| !!! | GTTTACACCTTATTTTTTTA+GGG | - | chr5_4:52472673-52472692 | Msa0857160:intron | 20.0% |
| !!! | TATTATTTAGTGGAATTTTG+TGG | - | chr5_4:52472707-52472726 | Msa0857160:intron | 20.0% |
| !! | TAATAGCTTAAAAAACAACT+TGG | + | chr5_4:52473016-52473035 | None:intergenic | 20.0% |
| !! | ATCAAAATTGTGAAATTGTT+TGG | + | chr5_4:52473132-52473151 | None:intergenic | 20.0% |
| !! | TCCTTGAATATGATAAAAAT+TGG | - | chr5_4:52473176-52473195 | Msa0857160:intron | 20.0% |
| !! | CCTTGAATATGATAAAAATT+GGG | - | chr5_4:52473177-52473196 | Msa0857160:intron | 20.0% |
| !! | CTTGAATATGATAAAAATTG+GGG | - | chr5_4:52473178-52473197 | Msa0857160:intron | 20.0% |
| !!! | ATTTTGGCATTATGTATATT+CGG | - | chr5_4:52473264-52473283 | Msa0857160:intron | 20.0% |
| !! | ATTAGATTACTACTATTATC+AGG | - | chr5_4:52473730-52473749 | Msa0857160:intron | 20.0% |
| !!! | TTTTATCATGCATCATATTT+CGG | - | chr5_4:52473948-52473967 | Msa0857160:intron | 20.0% |
| !! | TGAAATTCATATACTTCATT+TGG | + | chr5_4:52474185-52474204 | None:intergenic | 20.0% |
| !!! | CAAGTTGATTTAATGATATT+AGG | - | chr5_4:52474768-52474787 | Msa0857160:intron | 20.0% |
| !! | TAAAATTGTTTATCCAATCA+AGG | + | chr5_4:52474844-52474863 | None:intergenic | 20.0% |
| !! | AAAGATAAAATAAAGTCAGA+TGG | - | chr5_4:52474913-52474932 | Msa0857160:intron | 20.0% |
| !! | TTAATGCTTTCAAATTGTAA+CGG | - | chr5_4:52475126-52475145 | Msa0857160:intron | 20.0% |
| !!! | ATCATGGCTTTTAAAAAATA+TGG | - | chr5_4:52475620-52475639 | Msa0857160:intron | 20.0% |
| !!! | CTTTTAAAAAATATGGTCTT+GGG | - | chr5_4:52475627-52475646 | Msa0857160:intron | 20.0% |
| !!! | TTTTAAAAAATATGGTCTTG+GGG | - | chr5_4:52475628-52475647 | Msa0857160:intron | 20.0% |
| !! | ATAAAAAAACTTTGACATCA+CGG | - | chr5_4:52475718-52475737 | Msa0857160:intron | 20.0% |
| !!! | TTTCAAAAGGTTTTAAAGAA+AGG | + | chr5_4:52475763-52475782 | None:intergenic | 20.0% |
| !! | AAGATATGATAATATGGAAA+AGG | + | chr5_4:52476327-52476346 | None:intergenic | 20.0% |
| !! | CTAATATACTAACATTCTTA+TGG | + | chr5_4:52476376-52476395 | None:intergenic | 20.0% |
| !! | AAAGTAACATAATAGGATTT+GGG | + | chr5_4:52476484-52476503 | None:intergenic | 20.0% |
| !! | ACAAATCAAAGTAACATAAT+AGG | + | chr5_4:52476491-52476510 | None:intergenic | 20.0% |
| !! | TTTACAATAATAAACAGCAA+TGG | + | chr5_4:52476708-52476727 | None:intergenic | 20.0% |
| !! | CTGTTTATTATTGTAAACAT+TGG | - | chr5_4:52476711-52476730 | Msa0857160:intron | 20.0% |
| !!! | TAAGTCTTCAAAATCATTTT+TGG | + | chr5_4:52477015-52477034 | None:intergenic | 20.0% |
| !!! | GAAGACTTAAAATTGAATTT+TGG | - | chr5_4:52477026-52477045 | Msa0857160:intron | 20.0% |
| !!! | ATATATACAATTTGGTTTTG+TGG | - | chr5_4:52477305-52477324 | Msa0857160:CDS | 20.0% |
| !! | AGTTCTTTATAAGTTAGCTT+TGG | - | chr5_4:52472513-52472532 | Msa0857160:intron | 25.0% |
| ! | TTGTACTCCCTAAAAAAATA+AGG | + | chr5_4:52472683-52472702 | None:intergenic | 25.0% |
| ! | AAGCTATTATAGATAGCTTA+TGG | - | chr5_4:52473027-52473046 | Msa0857160:CDS | 25.0% |
| !!! | CAATTTCACAATTTTGATAG+CGG | - | chr5_4:52473134-52473153 | Msa0857160:intron | 25.0% |
| !! | CCCAATTTTTATCATATTCA+AGG | + | chr5_4:52473180-52473199 | None:intergenic | 25.0% |
| !! | AGATATGTGATTGTGTATTT+TGG | - | chr5_4:52473248-52473267 | Msa0857160:intron | 25.0% |
| ! | AAAAGACCAATAACAACAAA+TGG | + | chr5_4:52473338-52473357 | None:intergenic | 25.0% |
| !!! | ATTTGTTGTTATTGGTCTTT+TGG | - | chr5_4:52473337-52473356 | Msa0857160:intron | 25.0% |
| !!! | AAGTATTTACATTTTGCTGT+AGG | - | chr5_4:52473493-52473512 | Msa0857160:CDS | 25.0% |
| !!! | AGTATTTACATTTTGCTGTA+GGG | - | chr5_4:52473494-52473513 | Msa0857160:CDS | 25.0% |
| !!! | ACAATACTGTTTTTTTGCAA+AGG | + | chr5_4:52473657-52473676 | None:intergenic | 25.0% |
| ! | AAAGATGATGAAATGTTCTT+AGG | - | chr5_4:52473687-52473706 | Msa0857160:CDS | 25.0% |
| ! | TTCATATTAGTGTGTATCAA+AGG | + | chr5_4:52474222-52474241 | None:intergenic | 25.0% |
| !! | CTAAAGAAGCATAGTTAATT+CGG | - | chr5_4:52474408-52474427 | Msa0857160:intron | 25.0% |
| ! | TGTAGTTAAAATTATGACCA+TGG | - | chr5_4:52474665-52474684 | Msa0857160:intron | 25.0% |
| ! | AAGGAACACAAGTAATATTA+CGG | + | chr5_4:52475163-52475182 | None:intergenic | 25.0% |
| ! | TGTGATTTCAAAAATCACAA+AGG | + | chr5_4:52475182-52475201 | None:intergenic | 25.0% |
| !!! | TTTTTGAAATCACAGTTTGA+AGG | - | chr5_4:52475188-52475207 | Msa0857160:CDS | 25.0% |
| !! | ACATTACTCTTTTACAACAT+TGG | - | chr5_4:52475235-52475254 | Msa0857160:CDS | 25.0% |
| ! | TTTAATGAATTTCCAGTATC+AGG | + | chr5_4:52475353-52475372 | None:intergenic | 25.0% |
| ! | TGATACTGGAAATTCATTAA+AGG | - | chr5_4:52475352-52475371 | Msa0857160:intron | 25.0% |
| ! | TCATAGATTTATGCAAATCA+TGG | - | chr5_4:52475604-52475623 | Msa0857160:intron | 25.0% |
| !!! | GCTTTTAAAAAATATGGTCT+TGG | - | chr5_4:52475626-52475645 | Msa0857160:intron | 25.0% |
| !! | TTTAAAAAATATGGTCTTGG+GGG | - | chr5_4:52475629-52475648 | Msa0857160:intron | 25.0% |
| !!! | AAGTTTTTTTATCGCAATTG+AGG | + | chr5_4:52475710-52475729 | None:intergenic | 25.0% |
| ! | ATAATAACTTCAGTGATACA+TGG | - | chr5_4:52475853-52475872 | Msa0857160:intron | 25.0% |
| ! | GAATATTTGTAACAGATTGA+AGG | + | chr5_4:52476073-52476092 | None:intergenic | 25.0% |
| ! | TTTACAAATATCCTTACCAA+TGG | - | chr5_4:52476116-52476135 | Msa0857160:intron | 25.0% |
| ! | TCTAAACTCTAAATGACTAA+AGG | - | chr5_4:52476142-52476161 | Msa0857160:intron | 25.0% |
| !!! | TTGATAATGTACCAACATTT+AGG | + | chr5_4:52476288-52476307 | None:intergenic | 25.0% |
| ! | CAAAGTAACATAATAGGATT+TGG | + | chr5_4:52476485-52476504 | None:intergenic | 25.0% |
| ! | AAGGGAAAATAATCTATGTT+TGG | + | chr5_4:52477172-52477191 | None:intergenic | 25.0% |
| !! | ATAGCTAAAAAAGTGTGTAA+GGG | + | chr5_4:52477190-52477209 | None:intergenic | 25.0% |
| !! | TATAGCTAAAAAAGTGTGTA+AGG | + | chr5_4:52477191-52477210 | None:intergenic | 25.0% |
| ! | CTCAACTGATATATACAATT+TGG | - | chr5_4:52477297-52477316 | Msa0857160:CDS | 25.0% |
| ! | AAACTCAATAAATTGCTTGT+AGG | - | chr5_4:52477540-52477559 | Msa0857160:CDS | 25.0% |
| ! | AAGCTAGGAAAGTAAATAAA+AGG | - | chr5_4:52477641-52477660 | Msa0857160:five_prime_UTR | 25.0% |
| !!! | AAAGTCAATTTTGTTGACTA+AGG | - | chr5_4:52477670-52477689 | Msa0857160:five_prime_UTR | 25.0% |
| AAGAAAGGATACTGTTTCAA+AGG | + | chr5_4:52472541-52472560 | None:intergenic | 30.0% | |
| ! | ACGTCTTTTATCAGAAATGT+CGG | - | chr5_4:52472638-52472657 | Msa0857160:intron | 30.0% |
| ! | TCTTATTTGAGCTTGTCTAT+TGG | + | chr5_4:52473105-52473124 | None:intergenic | 30.0% |
| ATAACAACAAATGGAGTCTT+TGG | + | chr5_4:52473329-52473348 | None:intergenic | 30.0% | |
| !! | AAGACTCCATTTGTTGTTAT+TGG | - | chr5_4:52473329-52473348 | Msa0857160:intron | 30.0% |
| CCAAAGCAAAGAAAAAAGAA+TGG | + | chr5_4:52473407-52473426 | None:intergenic | 30.0% | |
| !!! | CCATTCTTTTTTCTTTGCTT+TGG | - | chr5_4:52473404-52473423 | Msa0857160:intron | 30.0% |
| ! | TTCAATTCCAATTTTGTCTC+AGG | - | chr5_4:52474044-52474063 | Msa0857160:intron | 30.0% |
| CTTCAATACTGATACCAAAT+TGG | - | chr5_4:52474252-52474271 | Msa0857160:intron | 30.0% | |
| TTGGTATTCATACACCAATT+TGG | + | chr5_4:52474269-52474288 | None:intergenic | 30.0% | |
| TTAATTCAAATTTGCGACCA+GGG | + | chr5_4:52474346-52474365 | None:intergenic | 30.0% | |
| TTTAATTCAAATTTGCGACC+AGG | + | chr5_4:52474347-52474366 | None:intergenic | 30.0% | |
| !! | CTCCTGTCAATTATTTTTCT+CGG | - | chr5_4:52474470-52474489 | Msa0857160:intron | 30.0% |
| !! | TCCTGTCAATTATTTTTCTC+GGG | - | chr5_4:52474471-52474490 | Msa0857160:intron | 30.0% |
| TTAGTATGTTAACTAAGCCA+TGG | + | chr5_4:52474685-52474704 | None:intergenic | 30.0% | |
| ! | TTGCCTGTTATGGAATTTTT+GGG | - | chr5_4:52474745-52474764 | Msa0857160:intron | 30.0% |
| GAAGAAACCTAATATCATAC+TGG | + | chr5_4:52475067-52475086 | None:intergenic | 30.0% | |
| !!! | CATATGTTTTAAGAGATTGC+AGG | - | chr5_4:52475092-52475111 | Msa0857160:intron | 30.0% |
| TGGACATATATGTTACTATC+CGG | - | chr5_4:52475255-52475274 | Msa0857160:CDS | 30.0% | |
| GAGTAAAAACAAATCTCAGA+TGG | + | chr5_4:52475287-52475306 | None:intergenic | 30.0% | |
| !!! | GAGATTTGTTTTTACTCTCT+AGG | - | chr5_4:52475290-52475309 | Msa0857160:intron | 30.0% |
| ACCACTATTTACTATTGTAG+CGG | - | chr5_4:52475326-52475345 | Msa0857160:intron | 30.0% | |
| ACTGGAAATTCATTAAAGGA+CGG | - | chr5_4:52475356-52475375 | Msa0857160:intron | 30.0% | |
| ! | TTAAAAAATATGGTCTTGGG+GGG | - | chr5_4:52475630-52475649 | Msa0857160:intron | 30.0% |
| !! | TTTTTCATTTTTCCCATGAG+AGG | - | chr5_4:52475959-52475978 | Msa0857160:intron | 30.0% |
| AACGTATTATTTCCTCTCAT+GGG | + | chr5_4:52475974-52475993 | None:intergenic | 30.0% | |
| TAACGTATTATTTCCTCTCA+TGG | + | chr5_4:52475975-52475994 | None:intergenic | 30.0% | |
| ! | ACGTTAGTATTATCTGAAAC+AGG | - | chr5_4:52475989-52476008 | Msa0857160:intron | 30.0% |
| ! | CGTTAGTATTATCTGAAACA+GGG | - | chr5_4:52475990-52476009 | Msa0857160:intron | 30.0% |
| ! | TTTAGAGTTTAGACATCCAT+TGG | + | chr5_4:52476135-52476154 | None:intergenic | 30.0% |
| TACACATATATGATCAGTGT+AGG | - | chr5_4:52476165-52476184 | Msa0857160:intron | 30.0% | |
| AATGTTGGTACATTATCAAG+TGG | - | chr5_4:52476289-52476308 | Msa0857160:intron | 30.0% | |
| TTGAGTGTAAACATCATGTT+TGG | + | chr5_4:52477115-52477134 | None:intergenic | 30.0% | |
| TTAGTGTGTTTATTCTACAG+TGG | + | chr5_4:52477240-52477259 | None:intergenic | 30.0% | |
| TAAGCCAATAATGAGAACTA+TGG | + | chr5_4:52477418-52477437 | None:intergenic | 30.0% | |
| AAATTGCTTGTAGGTATTCA+TGG | - | chr5_4:52477549-52477568 | Msa0857160:exon | 30.0% | |
| TCGAGTGATAAAGAAAGAAT+AGG | - | chr5_4:52477585-52477604 | Msa0857160:five_prime_UTR | 30.0% | |
| CGAGTGATAAAGAAAGAATA+GGG | - | chr5_4:52477586-52477605 | Msa0857160:five_prime_UTR | 30.0% | |
| ! | ATCCAAATTTTGTGTAAGCT+AGG | - | chr5_4:52477626-52477645 | Msa0857160:five_prime_UTR | 30.0% |
| TTCCTAGCTTACACAAAATT+TGG | + | chr5_4:52477631-52477650 | None:intergenic | 30.0% | |
| GGAAATAACCATATCTGATC+CGG | + | chr5_4:52472279-52472298 | None:intergenic | 35.0% | |
| ! | TCTTTTCTCTAATGTCGTGT+CGG | - | chr5_4:52472606-52472625 | Msa0857160:intron | 35.0% |
| GTTTGAATAGCTGTTAGAGA+AGG | - | chr5_4:52472741-52472760 | Msa0857160:intron | 35.0% | |
| AATGTAAACACCTCTCACTT+GGG | + | chr5_4:52472774-52472793 | None:intergenic | 35.0% | |
| AAATGTAAACACCTCTCACT+TGG | + | chr5_4:52472775-52472794 | None:intergenic | 35.0% | |
| TCGAACATAATTACCTCTGA+TGG | - | chr5_4:52472811-52472830 | Msa0857160:intron | 35.0% | |
| ACATAATTACCTCTGATGGA+TGG | - | chr5_4:52472815-52472834 | Msa0857160:intron | 35.0% | |
| ATGATGTGTGAATCATGGTA+GGG | + | chr5_4:52472883-52472902 | None:intergenic | 35.0% | |
| AAACCATGATGTGTGAATCA+TGG | + | chr5_4:52472888-52472907 | None:intergenic | 35.0% | |
| ATGATTCACACATCATGGTT+TGG | - | chr5_4:52472887-52472906 | Msa0857160:intron | 35.0% | |
| TGATTCACACATCATGGTTT+GGG | - | chr5_4:52472888-52472907 | Msa0857160:intron | 35.0% | |
| AAAATTGGGGAGTTGAAATG+AGG | - | chr5_4:52473191-52473210 | Msa0857160:intron | 35.0% | |
| AAATTGGGGAGTTGAAATGA+GGG | - | chr5_4:52473192-52473211 | Msa0857160:intron | 35.0% | |
| !!! | TGTTGTTATTGGTCTTTTGG+AGG | - | chr5_4:52473340-52473359 | Msa0857160:intron | 35.0% |
| ! | ACAAACTAGTGTTGAACCTA+CGG | + | chr5_4:52473807-52473826 | None:intergenic | 35.0% |
| TCTTGTATCAGCAATTCTCT+CGG | - | chr5_4:52474017-52474036 | Msa0857160:intron | 35.0% | |
| TCGTTTACCTGAGACAAAAT+TGG | + | chr5_4:52474054-52474073 | None:intergenic | 35.0% | |
| ACAGGATGAAACATATCCAA+GGG | + | chr5_4:52474306-52474325 | None:intergenic | 35.0% | |
| TACAGGATGAAACATATCCA+AGG | + | chr5_4:52474307-52474326 | None:intergenic | 35.0% | |
| TGGATATGTTTCATCCTGTA+TGG | - | chr5_4:52474307-52474326 | Msa0857160:CDS | 35.0% | |
| TCCCGAGAAAAATAATTGAC+AGG | + | chr5_4:52474475-52474494 | None:intergenic | 35.0% | |
| TATAAAGTCAACCACCTACT+TGG | - | chr5_4:52474500-52474519 | Msa0857160:intron | 35.0% | |
| !! | TTTTAAGGGATGCCATGTTT+TGG | - | chr5_4:52474586-52474605 | Msa0857160:intron | 35.0% |
| CTGATAGTTGCTAAACTTCT+TGG | - | chr5_4:52474707-52474726 | Msa0857160:intron | 35.0% | |
| TCATTATCAGTTGCCTGTTA+TGG | - | chr5_4:52474735-52474754 | Msa0857160:intron | 35.0% | |
| ! | GTTGCCTGTTATGGAATTTT+TGG | - | chr5_4:52474744-52474763 | Msa0857160:intron | 35.0% |
| TTGCCCAAAAATTCCATAAC+AGG | + | chr5_4:52474751-52474770 | None:intergenic | 35.0% | |
| AAGACTATTTACGCCTTGAT+TGG | - | chr5_4:52474828-52474847 | Msa0857160:intron | 35.0% | |
| TGATACGCCAGTATGATATT+AGG | - | chr5_4:52475057-52475076 | Msa0857160:intron | 35.0% | |
| GATTTCCTGTTGTAAAACGT+TGG | - | chr5_4:52475210-52475229 | Msa0857160:CDS | 35.0% | |
| ! | TGTTTCCAACGTTTTACAAC+AGG | + | chr5_4:52475218-52475237 | None:intergenic | 35.0% |
| CATATATGTTACTATCCGGT+AGG | - | chr5_4:52475259-52475278 | Msa0857160:CDS | 35.0% | |
| TCCGCTACAATAGTAAATAG+TGG | + | chr5_4:52475330-52475349 | None:intergenic | 35.0% | |
| ! | TTTGCAGGAGCTAATCTTTT+TGG | - | chr5_4:52475527-52475546 | Msa0857160:intron | 35.0% |
| GGATGCAAACAAAAAACTGA+AGG | - | chr5_4:52475548-52475567 | Msa0857160:intron | 35.0% | |
| ATAACTTCAGTGATACATGG+TGG | - | chr5_4:52475856-52475875 | Msa0857160:intron | 35.0% | |
| ACAACAAAAGAATGCATGGT+CGG | + | chr5_4:52475902-52475921 | None:intergenic | 35.0% | |
| TCGAACAACAAAAGAATGCA+TGG | + | chr5_4:52475906-52475925 | None:intergenic | 35.0% | |
| ! | TAGTATTATCTGAAACAGGG+AGG | - | chr5_4:52475993-52476012 | Msa0857160:intron | 35.0% |
| AGTTTAGACATCCATTGGTA+AGG | + | chr5_4:52476130-52476149 | None:intergenic | 35.0% | |
| TCCCATTCTTGTCAAAACTA+TGG | - | chr5_4:52476209-52476228 | Msa0857160:intron | 35.0% | |
| !!! | CCCATAGTTTTGACAAGAAT+GGG | + | chr5_4:52476213-52476232 | None:intergenic | 35.0% |
| CCCATTCTTGTCAAAACTAT+GGG | - | chr5_4:52476210-52476229 | Msa0857160:intron | 35.0% | |
| CCATTCTTGTCAAAACTATG+GGG | - | chr5_4:52476211-52476230 | Msa0857160:intron | 35.0% | |
| ! | TAGTTTGGTAGTTGACTGAA+GGG | + | chr5_4:52476241-52476260 | None:intergenic | 35.0% |
| !! | TTGATTTGTCAAAGCGTTTG+AGG | + | chr5_4:52476453-52476472 | None:intergenic | 35.0% |
| TCTATAGCCTCAATGTTACA+AGG | - | chr5_4:52476520-52476539 | Msa0857160:intron | 35.0% | |
| AATCGCAATTATCTGTTCGA+TGG | - | chr5_4:52476572-52476591 | Msa0857160:intron | 35.0% | |
| ATCGCAATTATCTGTTCGAT+GGG | - | chr5_4:52476573-52476592 | Msa0857160:intron | 35.0% | |
| AATTATCTGTTCGATGGGAT+TGG | - | chr5_4:52476578-52476597 | Msa0857160:intron | 35.0% | |
| ATTATCTGTTCGATGGGATT+GGG | - | chr5_4:52476579-52476598 | Msa0857160:intron | 35.0% | |
| ! | AAAGCATTCTCTTTGATTCC+AGG | - | chr5_4:52476660-52476679 | Msa0857160:intron | 35.0% |
| AAGCATTCTCTTTGATTCCA+GGG | - | chr5_4:52476661-52476680 | Msa0857160:intron | 35.0% | |
| AAGCATACCTGAAAATGTTG+AGG | + | chr5_4:52476796-52476815 | None:intergenic | 35.0% | |
| AACATCATGTTTGGAGGTAA+AGG | + | chr5_4:52477106-52477125 | None:intergenic | 35.0% | |
| AGTGTAAACATCATGTTTGG+AGG | + | chr5_4:52477112-52477131 | None:intergenic | 35.0% | |
| GTGAACACATAGATGGATAT+TGG | + | chr5_4:52477336-52477355 | None:intergenic | 35.0% | |
| TTGAAGTGTGAACACATAGA+TGG | + | chr5_4:52477343-52477362 | None:intergenic | 35.0% | |
| TTGGCTTACTCATTTATGCA+TGG | - | chr5_4:52477430-52477449 | Msa0857160:CDS | 35.0% | |
| ! | CAACAACATTTTCCTTCTCT+AGG | + | chr5_4:52477502-52477521 | None:intergenic | 35.0% |
| GACGTTGAGAATGAAGTTGA+CGG | - | chr5_4:52472312-52472331 | Msa0857160:CDS | 40.0% | |
| ! | CTCTGATGGATGGAACTTAT+GGG | - | chr5_4:52472825-52472844 | Msa0857160:intron | 40.0% |
| CATGATGTGTGAATCATGGT+AGG | + | chr5_4:52472884-52472903 | None:intergenic | 40.0% | |
| CTACCATGATTCACACATCA+TGG | - | chr5_4:52472882-52472901 | Msa0857160:intron | 40.0% | |
| CATCTCATCAGTAACAATGC+CGG | + | chr5_4:52473297-52473316 | None:intergenic | 40.0% | |
| ! | AAACTAGTGTTGAACCTACG+GGG | + | chr5_4:52473805-52473824 | None:intergenic | 40.0% |
| ! | CAAACTAGTGTTGAACCTAC+GGG | + | chr5_4:52473806-52473825 | None:intergenic | 40.0% |
| ! | AAAGCCTTTTCCCACTAAGT+GGG | - | chr5_4:52473893-52473912 | Msa0857160:intron | 40.0% |
| CTTGTATCAGCAATTCTCTC+GGG | - | chr5_4:52474018-52474037 | Msa0857160:intron | 40.0% | |
| ! | ATATCCAAGGGCTTCTAGTT+TGG | + | chr5_4:52474294-52474313 | None:intergenic | 40.0% |
| GAGAATTTGCCACACTAGAA+AGG | + | chr5_4:52474453-52474472 | None:intergenic | 40.0% | |
| !! | TGACAAGAAAGCATCCAAGT+AGG | + | chr5_4:52474517-52474536 | None:intergenic | 40.0% |
| GGATGCTTTCTTGTCACAAT+TGG | - | chr5_4:52474521-52474540 | Msa0857160:intron | 40.0% | |
| ATGTATCACTGACCTTGCAA+CGG | + | chr5_4:52474558-52474577 | None:intergenic | 40.0% | |
| ! | TCAGTTTGTGAGTGTCACTA+AGG | - | chr5_4:52474616-52474635 | Msa0857160:intron | 40.0% |
| ! | CAGTTTGTGAGTGTCACTAA+GGG | - | chr5_4:52474617-52474636 | Msa0857160:intron | 40.0% |
| AAATCTCAGATGGTTCCTAC+CGG | + | chr5_4:52475277-52475296 | None:intergenic | 40.0% | |
| GGAAATTCATTAAAGGACGG+TGG | - | chr5_4:52475359-52475378 | Msa0857160:intron | 40.0% | |
| ! | TAAAGGACGGTGGCTTATTT+TGG | - | chr5_4:52475369-52475388 | Msa0857160:intron | 40.0% |
| ! | TTAGCATTTTCCGACTTTGC+AGG | - | chr5_4:52475512-52475531 | Msa0857160:intron | 40.0% |
| ! | AAGATTAGCTCCTGCAAAGT+CGG | + | chr5_4:52475525-52475544 | None:intergenic | 40.0% |
| CATTGTGATCCTTGGTATTG+TGG | - | chr5_4:52475664-52475683 | Msa0857160:intron | 40.0% | |
| CACAACTATCCACAATACCA+AGG | + | chr5_4:52475676-52475695 | None:intergenic | 40.0% | |
| CTTGGTATTGTGGATAGTTG+TGG | - | chr5_4:52475674-52475693 | Msa0857160:intron | 40.0% | |
| CAACAAAAGAATGCATGGTC+GGG | + | chr5_4:52475901-52475920 | None:intergenic | 40.0% | |
| CATAAGAGTTGACAACGAAC+AGG | + | chr5_4:52476028-52476047 | None:intergenic | 40.0% | |
| CTGTTCGTTGTCAACTCTTA+TGG | - | chr5_4:52476026-52476045 | Msa0857160:intron | 40.0% | |
| TATGGATCTGCATTCCAAGT+AGG | - | chr5_4:52476044-52476063 | Msa0857160:intron | 40.0% | |
| CAGATTGAAGGATACCTACT+TGG | + | chr5_4:52476061-52476080 | None:intergenic | 40.0% | |
| TTGACAAGAATGGGAGAAGA+AGG | + | chr5_4:52476204-52476223 | None:intergenic | 40.0% | |
| !!! | CCCCATAGTTTTGACAAGAA+TGG | + | chr5_4:52476214-52476233 | None:intergenic | 40.0% |
| ! | AGTTTGGTAGTTGACTGAAG+GGG | + | chr5_4:52476240-52476259 | None:intergenic | 40.0% |
| ! | GTAGTTTGGTAGTTGACTGA+AGG | + | chr5_4:52476242-52476261 | None:intergenic | 40.0% |
| CTACCAAACTACCTCAAAGA+TGG | - | chr5_4:52476250-52476269 | Msa0857160:intron | 40.0% | |
| AAGGATCGAGATTCAAACTC+TGG | + | chr5_4:52476425-52476444 | None:intergenic | 40.0% | |
| ! | CAAAGCGTTTGAGGAGTTAA+AGG | + | chr5_4:52476444-52476463 | None:intergenic | 40.0% |
| CATCTTGCCTTGTAACATTG+AGG | + | chr5_4:52476530-52476549 | None:intergenic | 40.0% | |
| ! | TGTCTTGCCTCAACATTTTC+AGG | - | chr5_4:52476786-52476805 | Msa0857160:intron | 40.0% |
| ACACTTCAATTGCCATACCT+TGG | - | chr5_4:52477354-52477373 | Msa0857160:CDS | 40.0% | |
| TATGCATGGACTCCTTCAAA+TGG | - | chr5_4:52477444-52477463 | Msa0857160:CDS | 40.0% | |
| ! | CAACATTTTCCTTCTCTAGG+TGG | + | chr5_4:52477499-52477518 | None:intergenic | 40.0% |
| TATCGATGGCATCATTCTGC+CGG | - | chr5_4:52472176-52472195 | Msa0857160:three_prime_UTR | 45.0% | |
| TTCATTCTCAACGTCCTCGT+CGG | + | chr5_4:52472307-52472326 | None:intergenic | 45.0% | |
| GTTGAGAATGAAGTTGACGG+TGG | - | chr5_4:52472315-52472334 | Msa0857160:CDS | 45.0% | |
| AGAATGAAGTTGACGGTGGT+TGG | - | chr5_4:52472319-52472338 | Msa0857160:CDS | 45.0% | |
| GAAAGCTGTGCAAGGAAGAA+AGG | + | chr5_4:52472556-52472575 | None:intergenic | 45.0% | |
| CTTGCACAGCTTTCCACTTT+CGG | - | chr5_4:52472562-52472581 | Msa0857160:intron | 45.0% | |
| TTGCACAGCTTTCCACTTTC+GGG | - | chr5_4:52472563-52472582 | Msa0857160:intron | 45.0% | |
| ! | GTGAATGAAGTACCCGAAAG+TGG | + | chr5_4:52472578-52472597 | None:intergenic | 45.0% |
| AGGTTTGAATCCCAAGTGAG+AGG | - | chr5_4:52472761-52472780 | Msa0857160:intron | 45.0% | |
| CCATAAGTTCCATCCATCAG+AGG | + | chr5_4:52472827-52472846 | None:intergenic | 45.0% | |
| ! | CCTCTGATGGATGGAACTTA+TGG | - | chr5_4:52472824-52472843 | Msa0857160:intron | 45.0% |
| ! | ATTTTTACATCCCTCCCCGT+AGG | - | chr5_4:52473788-52473807 | Msa0857160:intron | 45.0% |
| CACTTAGTGGGAAAAGGCTT+TGG | + | chr5_4:52473894-52473913 | None:intergenic | 45.0% | |
| ! | CAAAGCCTTTTCCCACTAAG+TGG | - | chr5_4:52473892-52473911 | Msa0857160:intron | 45.0% |
| ! | AAGCCTTTTCCCACTAAGTG+GGG | - | chr5_4:52473894-52473913 | Msa0857160:intron | 45.0% |
| CACGCAGATGACAGCAATTA+AGG | + | chr5_4:52474115-52474134 | None:intergenic | 45.0% | |
| !! | AAGGGCTTCTAGTTTGGAGT+TGG | + | chr5_4:52474288-52474307 | None:intergenic | 45.0% |
| AACTCCAAACTAGAAGCCCT+TGG | - | chr5_4:52474287-52474306 | Msa0857160:intron | 45.0% | |
| ! | GAGAACATGACTAGCCATAC+AGG | + | chr5_4:52474324-52474343 | None:intergenic | 45.0% |
| TGTCGAGCTCATCTATGTGT+AGG | - | chr5_4:52474380-52474399 | Msa0857160:intron | 45.0% | |
| ! | TGTTGCAGACCTTTCTAGTG+TGG | - | chr5_4:52474441-52474460 | Msa0857160:intron | 45.0% |
| !! | CAAGAAAGCATCCAAGTAGG+TGG | + | chr5_4:52474514-52474533 | None:intergenic | 45.0% |
| GTGTAGTTGTTACCGTTGCA+AGG | - | chr5_4:52474543-52474562 | Msa0857160:intron | 45.0% | |
| !! | TAAGGGATGCCATGTTTTGG+TGG | - | chr5_4:52474589-52474608 | Msa0857160:intron | 45.0% |
| ACTGAGCAACCACCAAAACA+TGG | + | chr5_4:52474601-52474620 | None:intergenic | 45.0% | |
| !! | TATTGTAGCGGACCTGATAC+TGG | - | chr5_4:52475338-52475357 | Msa0857160:intron | 45.0% |
| AGTAACCTTCAGCACGGTAT+CGG | + | chr5_4:52475432-52475451 | None:intergenic | 45.0% | |
| GAAGACAGTAACCTTCAGCA+CGG | + | chr5_4:52475438-52475457 | None:intergenic | 45.0% | |
| !! | GCACCATCTTTGAGGTAGTT+TGG | + | chr5_4:52476256-52476275 | None:intergenic | 45.0% |
| ! | GCAGCTTGCTTCCTAAATGT+TGG | - | chr5_4:52476274-52476293 | Msa0857160:intron | 45.0% |
| CGAGATTCAAACTCTGGTGA+CGG | + | chr5_4:52476419-52476438 | None:intergenic | 45.0% | |
| TCTTTGATTCCAGGGTGTGA+CGG | - | chr5_4:52476669-52476688 | Msa0857160:intron | 45.0% | |
| ATAAACAGCAATGGCAGCAG+AGG | + | chr5_4:52476699-52476718 | None:intergenic | 45.0% | |
| CAACAGCTGAAGAGATCTTC+AGG | + | chr5_4:52476761-52476780 | None:intergenic | 45.0% | |
| TTGCAGTGTGTGCATGTGTA+TGG | - | chr5_4:52476894-52476913 | Msa0857160:intron | 45.0% | |
| GCATGTTGATGTGAATGCTG+AGG | - | chr5_4:52477269-52477288 | Msa0857160:CDS | 45.0% | |
| GATGAAGCAACACCAAGGTA+TGG | + | chr5_4:52477369-52477388 | None:intergenic | 45.0% | |
| GAAGAGATGAAGCAACACCA+AGG | + | chr5_4:52477374-52477393 | None:intergenic | 45.0% | |
| GGGGCCATAGTTCTCATTAT+TGG | - | chr5_4:52477411-52477430 | Msa0857160:CDS | 45.0% | |
| ACTCCTTCAAATGGCTCTTC+AGG | - | chr5_4:52477453-52477472 | Msa0857160:CDS | 45.0% | |
| CAATCCCCAGTGATCATCTC+CGG | + | chr5_4:52472256-52472275 | None:intergenic | 50.0% | |
| AGATGATCACTGGGGATTGC+CGG | - | chr5_4:52472257-52472276 | Msa0857160:CDS | 50.0% | |
| ! | GTTATTTCCATCAGCCGACG+AGG | - | chr5_4:52472290-52472309 | Msa0857160:CDS | 50.0% |
| GACATGCAATTACGCGGTGA+AGG | - | chr5_4:52472387-52472406 | Msa0857160:CDS | 50.0% | |
| TGCAATTACGCGGTGAAGGA+TGG | - | chr5_4:52472391-52472410 | Msa0857160:CDS | 50.0% | |
| GCAATTACGCGGTGAAGGAT+GGG | - | chr5_4:52472392-52472411 | Msa0857160:CDS | 50.0% | |
| ! | GAGTGTAGGGAATGATGACG+TGG | - | chr5_4:52472414-52472433 | Msa0857160:intron | 50.0% |
| ! | TGTAGGGAATGATGACGTGG+CGG | - | chr5_4:52472417-52472436 | Msa0857160:intron | 50.0% |
| ! | GGGGAAGAGTGTGAATAGAC+CGG | - | chr5_4:52472438-52472457 | Msa0857160:intron | 50.0% |
| ! | GAAGAGTGTGAATAGACCGG+CGG | - | chr5_4:52472441-52472460 | Msa0857160:intron | 50.0% |
| CGAAAGTGGAAAGCTGTGCA+AGG | + | chr5_4:52472564-52472583 | None:intergenic | 50.0% | |
| ATGTATATTCGGCACCGTGC+CGG | - | chr5_4:52473275-52473294 | Msa0857160:intron | 50.0% | |
| CATCAGTAACAATGCCGGCA+CGG | + | chr5_4:52473292-52473311 | None:intergenic | 50.0% | |
| TCTTGCTGCTGCAACTGGAA+TGG | - | chr5_4:52473364-52473383 | Msa0857160:intron | 50.0% | |
| ! | TAGTGTTGAACCTACGGGGA+GGG | + | chr5_4:52473801-52473820 | None:intergenic | 50.0% |
| ! | CTTTTCCCACTAAGTGGGGT+CGG | - | chr5_4:52473898-52473917 | Msa0857160:intron | 50.0% |
| ! | ATGGCTAGTCATGTTCTCCC+TGG | - | chr5_4:52474326-52474345 | Msa0857160:CDS | 50.0% |
| CACATAGATGAGCTCGACAG+AGG | + | chr5_4:52474379-52474398 | None:intergenic | 50.0% | |
| AGCAAGCTGCACCATCTTTG+AGG | + | chr5_4:52476264-52476283 | None:intergenic | 50.0% | |
| GTTGCTTCATCTCTTCCCAC+AGG | - | chr5_4:52477378-52477397 | Msa0857160:CDS | 50.0% | |
| ATCTCTTCCCACAGGCTTTG+TGG | - | chr5_4:52477386-52477405 | Msa0857160:CDS | 50.0% | |
| GCACCTGAAGAGCCATTTGA+AGG | + | chr5_4:52477459-52477478 | None:intergenic | 50.0% | |
| TTCAGGTGCTTCCTTCTCAG+AGG | - | chr5_4:52477470-52477489 | Msa0857160:CDS | 50.0% | |
| TCAGGTGCTTCCTTCTCAGA+GGG | - | chr5_4:52477471-52477490 | Msa0857160:CDS | 50.0% | |
| GGGGATTGCCGGATCAGATA+TGG | - | chr5_4:52472268-52472287 | Msa0857160:CDS | 55.0% | |
| GGTGGGGACATGCAATTACG+CGG | - | chr5_4:52472381-52472400 | Msa0857160:CDS | 55.0% | |
| ! | CGGTGAAGGATGGGAGTGTA+GGG | - | chr5_4:52472401-52472420 | Msa0857160:intron | 55.0% |
| ! | GTAGGGAATGATGACGTGGC+GGG | - | chr5_4:52472418-52472437 | Msa0857160:intron | 55.0% |
| ! | TAGGGAATGATGACGTGGCG+GGG | - | chr5_4:52472419-52472438 | Msa0857160:intron | 55.0% |
| !! | GCGACGGTTGTAATGGGTGT+CGG | - | chr5_4:52472484-52472503 | Msa0857160:intron | 55.0% |
| ! | CTAGTGTTGAACCTACGGGG+AGG | + | chr5_4:52473802-52473821 | None:intergenic | 55.0% |
| CGACCCCACTTAGTGGGAAA+AGG | + | chr5_4:52473900-52473919 | None:intergenic | 55.0% | |
| TGTAGCCGACCCCACTTAGT+GGG | + | chr5_4:52473906-52473925 | None:intergenic | 55.0% | |
| ATGTAGCCGACCCCACTTAG+TGG | + | chr5_4:52473907-52473926 | None:intergenic | 55.0% | |
| ACTAAGTGGGGTCGGCTACA+TGG | - | chr5_4:52473906-52473925 | Msa0857160:intron | 55.0% | |
| ! | TATGGTCTTGGGGGGAGTCA+CGG | - | chr5_4:52475638-52475657 | Msa0857160:intron | 55.0% |
| CACGGTCGCATTGTGATCCT+TGG | - | chr5_4:52475656-52475675 | Msa0857160:intron | 55.0% | |
| ! | TCTGAAACAGGGAGGCTCTG+TGG | - | chr5_4:52476001-52476020 | Msa0857160:intron | 55.0% |
| TCTGTTCGATGGGATTGGGC+TGG | - | chr5_4:52476583-52476602 | Msa0857160:intron | 55.0% | |
| ! | TTCCCACAGGCTTTGTGGCA+GGG | - | chr5_4:52477391-52477410 | Msa0857160:CDS | 55.0% |
| ! | CTAGGTGGAACCCTCTGAGA+AGG | + | chr5_4:52477484-52477503 | None:intergenic | 55.0% |
| CAGAGGGTTCCACCTAGAGA+AGG | - | chr5_4:52477487-52477506 | Msa0857160:CDS | 55.0% | |
| CGATGGCATCATTCTGCCGG+CGG | - | chr5_4:52472179-52472198 | Msa0857160:three_prime_UTR | 60.0% | |
| CAGTGATCATCTCCGGTCGC+CGG | + | chr5_4:52472249-52472268 | None:intergenic | 60.0% | |
| GGCGACCGGAGATGATCACT+GGG | - | chr5_4:52472248-52472267 | Msa0857160:CDS | 60.0% | |
| GCGACCGGAGATGATCACTG+GGG | - | chr5_4:52472249-52472268 | Msa0857160:CDS | 60.0% | |
| ! | TCAACGTCCTCGTCGGCTGA+TGG | + | chr5_4:52472300-52472319 | None:intergenic | 60.0% |
| ! | GCGGTGAAGGATGGGAGTGT+AGG | - | chr5_4:52472400-52472419 | Msa0857160:intron | 60.0% |
| GAGTGTGAATAGACCGGCGG+AGG | - | chr5_4:52472444-52472463 | Msa0857160:intron | 60.0% | |
| TGTGAATAGACCGGCGGAGG+TGG | - | chr5_4:52472447-52472466 | Msa0857160:intron | 60.0% | |
| GAGGCTCTTGCTGCTGCAAC+TGG | - | chr5_4:52473359-52473378 | Msa0857160:intron | 60.0% | |
| GCTGCAACTGGAATGGCTGC+AGG | - | chr5_4:52473371-52473390 | Msa0857160:intron | 60.0% | |
| GCAACTGGAATGGCTGCAGG+AGG | - | chr5_4:52473374-52473393 | Msa0857160:intron | 60.0% | |
| !! | TCAGCACGGTATCGGCTGCT+TGG | + | chr5_4:52475424-52475443 | None:intergenic | 60.0% |
| AGCAGCCGATACCGTGCTGA+AGG | - | chr5_4:52475424-52475443 | Msa0857160:intron | 60.0% | |
| ! | CTTCCCACAGGCTTTGTGGC+AGG | - | chr5_4:52477390-52477409 | Msa0857160:CDS | 60.0% |
| ! | TCCCACAGGCTTTGTGGCAG+GGG | - | chr5_4:52477392-52477411 | Msa0857160:CDS | 60.0% |
| AGTGCAATGGCTCCGGCGTC+TGG | + | chr5_4:52472208-52472227 | None:intergenic | 65.0% | |
| GGCAGGCAGTGCAATGGCTC+CGG | + | chr5_4:52472215-52472234 | None:intergenic | 65.0% | |
| GGAGCCATTGCACTGCCTGC+CGG | - | chr5_4:52472214-52472233 | Msa0857160:three_prime_UTR | 65.0% | |
| AACGCCGGCAGGCAGTGCAA+TGG | + | chr5_4:52472221-52472240 | None:intergenic | 65.0% | |
| TGCCTGCCGGCGTTAGACTC+CGG | - | chr5_4:52472227-52472246 | Msa0857160:exon | 65.0% | |
| CGGCGACCGGAGATGATCAC+TGG | - | chr5_4:52472247-52472266 | Msa0857160:CDS | 65.0% | |
| ACGGCGGAGGAAGGAGAAGG+TGG | - | chr5_4:52472363-52472382 | Msa0857160:CDS | 65.0% | |
| CGGCGGAGGAAGGAGAAGGT+GGG | - | chr5_4:52472364-52472383 | Msa0857160:CDS | 65.0% | |
| GGCGGAGGAAGGAGAAGGTG+GGG | - | chr5_4:52472365-52472384 | Msa0857160:CDS | 65.0% | |
| GAATAGACCGGCGGAGGTGG+CGG | - | chr5_4:52472450-52472469 | Msa0857160:intron | 65.0% | |
| CATTACAACCGTCGCCGCCG+CGG | + | chr5_4:52472479-52472498 | None:intergenic | 65.0% | |
| GCGGCGGCGACGGTTGTAAT+GGG | - | chr5_4:52472478-52472497 | Msa0857160:intron | 65.0% | |
| GCCCCTGCCACAAAGCCTGT+GGG | + | chr5_4:52477396-52477415 | None:intergenic | 65.0% | |
| CGGTCGCCGGAGTCTAACGC+CGG | + | chr5_4:52472236-52472255 | None:intergenic | 70.0% | |
| CGGCGTTAGACTCCGGCGAC+CGG | - | chr5_4:52472234-52472253 | Msa0857160:exon | 70.0% | |
| TTGACGGTGGTTGGCGCCGC+CGG | - | chr5_4:52472328-52472347 | Msa0857160:CDS | 70.0% | |
| CGCACGGCGGAGGAAGGAGA+AGG | - | chr5_4:52472360-52472379 | Msa0857160:CDS | 70.0% | |
| CGCGGCGGCGACGGTTGTAA+TGG | - | chr5_4:52472477-52472496 | Msa0857160:intron | 70.0% | |
| ! | AGAGGCGCACCGTCACACCC+TGG | + | chr5_4:52476681-52476700 | None:intergenic | 70.0% |
| GGCCCCTGCCACAAAGCCTG+TGG | + | chr5_4:52477397-52477416 | None:intergenic | 70.0% | |
| TGCCGGCGGTGTCCAGACGC+CGG | - | chr5_4:52472193-52472212 | Msa0857160:three_prime_UTR | 75.0% | |
| CTCCGGCGTCTGGACACCGC+CGG | + | chr5_4:52472198-52472217 | None:intergenic | 75.0% | |
| CGCCGGAGTCTAACGCCGGC+AGG | + | chr5_4:52472232-52472251 | None:intergenic | 75.0% | |
| GTGGTTGGCGCCGCCGGAGA+CGG | - | chr5_4:52472334-52472353 | Msa0857160:CDS | 75.0% | |
| ! | TAGACCGGCGGAGGTGGCGG+TGG | - | chr5_4:52472453-52472472 | Msa0857160:intron | 75.0% |
| ! | GTTGGCGCCGCCGGAGACGG+CGG | - | chr5_4:52472337-52472356 | Msa0857160:CDS | 80.0% |
| ! | CCGTGCGCCGCCGTCTCCGG+CGG | + | chr5_4:52472347-52472366 | None:intergenic | 85.0% |
| ! | CCGCCGGAGACGGCGGCGCA+CGG | - | chr5_4:52472344-52472363 | Msa0857160:CDS | 85.0% |
| ! | CCGCCGTGCGCCGCCGTCTC+CGG | + | chr5_4:52472350-52472369 | None:intergenic | 85.0% |
| ! | CCGGAGACGGCGGCGCACGG+CGG | - | chr5_4:52472347-52472366 | Msa0857160:CDS | 85.0% |
| ! | GAGACGGCGGCGCACGGCGG+AGG | - | chr5_4:52472350-52472369 | Msa0857160:CDS | 85.0% |
| ! | CGGCGGCGCACGGCGGAGGA+AGG | - | chr5_4:52472354-52472373 | Msa0857160:CDS | 85.0% |
| ! | GCGGCCACCGCCACCTCCGC+CGG | + | chr5_4:52472460-52472479 | None:intergenic | 85.0% |
| !! | GGCGGAGGTGGCGGTGGCCG+CGG | - | chr5_4:52472459-52472478 | Msa0857160:intron | 85.0% |
| !! | GGAGGTGGCGGTGGCCGCGG+CGG | - | chr5_4:52472462-52472481 | Msa0857160:intron | 85.0% |
| ! | GGCGGTGGCCGCGGCGGCGA+CGG | - | chr5_4:52472468-52472487 | Msa0857160:intron | 90.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 52472000 | 52477744 | 52472000 | ID=Msa0857160;Name=Msa0857160 |
| chr5_4 | mRNA | 52472000 | 52477744 | 52472000 | ID=Msa0857160-mRNA-1;Parent=Msa0857160;Name=Msa0857160-mRNA-1;_AED=0.14;_eAED=0.14;_QI=181|1|1|1|1|1|10|241|437 |
| chr5_4 | exon | 52472000 | 52472413 | 52472000 | ID=Msa0857160-mRNA-1:exon:16387;Parent=Msa0857160-mRNA-1 |
| chr5_4 | exon | 52472937 | 52473062 | 52472937 | ID=Msa0857160-mRNA-1:exon:16386;Parent=Msa0857160-mRNA-1 |
| chr5_4 | exon | 52473434 | 52473557 | 52473434 | ID=Msa0857160-mRNA-1:exon:16385;Parent=Msa0857160-mRNA-1 |
| chr5_4 | exon | 52473683 | 52473733 | 52473683 | ID=Msa0857160-mRNA-1:exon:16384;Parent=Msa0857160-mRNA-1 |
| chr5_4 | exon | 52474175 | 52474210 | 52474175 | ID=Msa0857160-mRNA-1:exon:16383;Parent=Msa0857160-mRNA-1 |
| chr5_4 | exon | 52474299 | 52474398 | 52474299 | ID=Msa0857160-mRNA-1:exon:16382;Parent=Msa0857160-mRNA-1 |
| chr5_4 | exon | 52475180 | 52475295 | 52475180 | ID=Msa0857160-mRNA-1:exon:16381;Parent=Msa0857160-mRNA-1 |
| chr5_4 | exon | 52475679 | 52475716 | 52475679 | ID=Msa0857160-mRNA-1:exon:16380;Parent=Msa0857160-mRNA-1 |
| chr5_4 | exon | 52476349 | 52476494 | 52476349 | ID=Msa0857160-mRNA-1:exon:16379;Parent=Msa0857160-mRNA-1 |
| chr5_4 | exon | 52477160 | 52477744 | 52477160 | ID=Msa0857160-mRNA-1:exon:16378;Parent=Msa0857160-mRNA-1 |
| chr5_4 | five_prime_UTR | 52477564 | 52477744 | 52477564 | ID=Msa0857160-mRNA-1:five_prime_utr;Parent=Msa0857160-mRNA-1 |
| chr5_4 | CDS | 52477160 | 52477563 | 52477160 | ID=Msa0857160-mRNA-1:cds;Parent=Msa0857160-mRNA-1 |
| chr5_4 | CDS | 52476349 | 52476494 | 52476349 | ID=Msa0857160-mRNA-1:cds;Parent=Msa0857160-mRNA-1 |
| chr5_4 | CDS | 52475679 | 52475716 | 52475679 | ID=Msa0857160-mRNA-1:cds;Parent=Msa0857160-mRNA-1 |
| chr5_4 | CDS | 52475180 | 52475295 | 52475180 | ID=Msa0857160-mRNA-1:cds;Parent=Msa0857160-mRNA-1 |
| chr5_4 | CDS | 52474299 | 52474398 | 52474299 | ID=Msa0857160-mRNA-1:cds;Parent=Msa0857160-mRNA-1 |
| chr5_4 | CDS | 52474175 | 52474210 | 52474175 | ID=Msa0857160-mRNA-1:cds;Parent=Msa0857160-mRNA-1 |
| chr5_4 | CDS | 52473683 | 52473733 | 52473683 | ID=Msa0857160-mRNA-1:cds;Parent=Msa0857160-mRNA-1 |
| chr5_4 | CDS | 52473434 | 52473557 | 52473434 | ID=Msa0857160-mRNA-1:cds;Parent=Msa0857160-mRNA-1 |
| chr5_4 | CDS | 52472937 | 52473062 | 52472937 | ID=Msa0857160-mRNA-1:cds;Parent=Msa0857160-mRNA-1 |
| chr5_4 | CDS | 52472241 | 52472413 | 52472241 | ID=Msa0857160-mRNA-1:cds;Parent=Msa0857160-mRNA-1 |
| chr5_4 | three_prime_UTR | 52472000 | 52472240 | 52472000 | ID=Msa0857160-mRNA-1:three_prime_utr;Parent=Msa0857160-mRNA-1 |
| Gene Sequence |
| Protein sequence |
