AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0243470


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0243470 MtrunA17_Chr2g0296661 78.131 503 15 2 1 408 1 503 0.0 766
Msa0243470 MtrunA17_Chr5g0401681 53.862 492 124 8 5 399 4 489 8.05e-176 500
Msa0243470 MtrunA17_Chr4g0053621 51.411 496 141 7 1 399 1 493 2.82e-171 489
Msa0243470 MtrunA17_Chr4g0052861 47.887 497 157 5 7 408 9 498 3.33e-166 475
Msa0243470 MtrunA17_Chr4g0052881 49.491 491 147 6 7 402 9 493 7.27e-164 469
Msa0243470 MtrunA17_Chr4g0052851 49.688 481 149 7 14 408 17 490 7.59e-161 462
Msa0243470 MtrunA17_Chr4g0017411 49.798 494 155 7 1 408 1 487 1.18e-155 448
Msa0243470 MtrunA17_Chr5g0401691 46.612 487 164 5 12 406 31 513 2.01e-147 428
Msa0243470 MtrunA17_Chr2g0296651 45.817 502 172 5 1 407 1 497 4.35e-142 414
Msa0243470 MtrunA17_Chr4g0039391 38.066 486 200 7 19 406 23 505 6.99e-100 306
Msa0243470 MtrunA17_Chr2g0310391 33.117 462 204 9 28 388 24 481 3.47e-75 242
Msa0243470 MtrunA17_Chr2g0310381 32.495 477 216 10 14 388 9 481 6.30e-75 241
Msa0243470 MtrunA17_Chr8g0344181 31.646 474 212 8 31 398 37 504 1.44e-74 241
Msa0243470 MtrunA17_Chr4g0057001 32.298 483 224 10 13 396 31 509 1.93e-74 241
Msa0243470 MtrunA17_Chr1g0174481 31.400 500 231 13 4 401 9 498 2.31e-74 240
Msa0243470 MtrunA17_Chr8g0344151 32.196 469 216 11 31 398 35 502 3.11e-73 238
Msa0243470 MtrunA17_Chr1g0174451 31.548 504 237 13 6 404 7 507 8.37e-73 236
Msa0243470 MtrunA17_Chr7g0255531 30.346 491 235 9 10 397 7 493 1.47e-72 236
Msa0243470 MtrunA17_Chr8g0382901 34.348 460 215 10 27 403 23 478 1.19e-71 242
Msa0243470 MtrunA17_Chr8g0382901 33.680 481 208 11 8 388 473 942 4.30e-70 238
Msa0243470 MtrunA17_Chr4g0058231 32.186 494 230 10 9 397 2 495 7.58e-71 231
Msa0243470 MtrunA17_Chr3g0116741 30.498 482 233 9 12 393 30 509 2.38e-70 230
Msa0243470 MtrunA17_Chr5g0403331 31.263 483 213 11 32 406 35 506 5.84e-70 229
Msa0243470 MtrunA17_Chr8g0339331 32.704 477 202 10 33 396 39 509 7.39e-70 229
Msa0243470 MtrunA17_Chr1g0174461 31.068 515 235 13 1 404 1 506 2.30e-69 227
Msa0243470 MtrunA17_Chr4g0030701 33.745 486 199 15 33 406 36 510 3.68e-69 227
Msa0243470 MtrunA17_Chr7g0258221 31.164 507 233 10 7 404 7 506 9.57e-69 226
Msa0243470 MtrunA17_Chr4g0061381 35.476 389 177 7 74 395 117 498 1.67e-68 225
Msa0243470 MtrunA17_Chr4g0047661 30.616 503 235 10 3 397 18 514 2.16e-68 225
Msa0243470 MtrunA17_Chr1g0174441 30.845 509 241 12 1 401 20 525 2.55e-68 225
Msa0243470 MtrunA17_Chr5g0445421 33.049 469 217 13 5 386 81 539 2.77e-68 226
Msa0243470 MtrunA17_Chr4g0058281 30.691 492 230 11 10 394 21 508 2.84e-68 224
Msa0243470 MtrunA17_Chr3g0084921 29.191 507 250 11 1 399 4 509 5.29e-68 224
Msa0243470 MtrunA17_Chr4g0058201 31.702 470 224 10 25 397 21 490 7.05e-68 223
Msa0243470 MtrunA17_Chr6g0484811 31.537 501 227 11 7 396 6 501 1.38e-67 223
Msa0243470 MtrunA17_Chr3g0086691 31.749 463 202 7 41 393 41 499 1.66e-67 223
Msa0243470 MtrunA17_Chr4g0047631 30.952 504 228 10 6 397 14 509 4.21e-67 221
Msa0243470 MtrunA17_Chr5g0445441 31.493 489 221 11 5 387 48 528 4.34e-67 222
Msa0243470 MtrunA17_Chr5g0430131 32.179 491 235 14 4 396 9 499 4.53e-67 221
Msa0243470 MtrunA17_Chr1g0174471 30.159 504 244 10 6 404 22 522 7.44e-67 221
Msa0243470 MtrunA17_Chr4g0047691 29.563 504 237 10 3 397 18 512 1.18e-66 221
Msa0243470 MtrunA17_Chr6g0451691 31.890 508 225 12 12 398 17 524 1.73e-66 220
Msa0243470 MtrunA17_Chr3g0101631 30.882 476 224 10 7 384 12 480 2.33e-66 219
Msa0243470 MtrunA17_Chr8g0339311 30.515 485 226 8 24 398 36 519 2.60e-66 220
Msa0243470 MtrunA17_Chr5g0445451 30.879 489 224 12 5 387 7 487 3.66e-66 219
Msa0243470 MtrunA17_Chr6g0463801 31.057 454 205 11 31 384 36 481 3.91e-66 219
Msa0243470 MtrunA17_Chr4g0047641 30.297 505 233 10 4 397 17 513 7.24e-66 218
Msa0243470 MtrunA17_Chr6g0458561 31.263 483 221 9 22 396 43 522 9.84e-66 218
Msa0243470 MtrunA17_Chr3g0086661 34.884 387 180 6 74 393 118 499 1.02e-65 218
Msa0243470 MtrunA17_Chr8g0344191 29.615 493 231 10 13 396 49 534 1.71e-65 218
Msa0243470 MtrunA17_Chr3g0086651 34.367 387 182 6 74 393 118 499 3.39e-65 216
Msa0243470 MtrunA17_Chr5g0403321 31.760 466 208 12 32 390 34 496 3.97e-65 216
Msa0243470 MtrunA17_Chr5g0430081 31.702 470 208 11 33 396 36 498 4.20e-65 216
Msa0243470 MtrunA17_Chr7g0224551 31.325 498 230 12 1 388 1 496 4.30e-65 216
Msa0243470 MtrunA17_Chr8g0362481 31.477 413 222 8 56 410 34 443 7.26e-65 214
Msa0243470 MtrunA17_Chr7g0224561 31.325 498 230 12 1 388 1 496 8.61e-65 216
Msa0243470 MtrunA17_Chr6g0451751 31.772 491 222 10 21 398 30 520 8.68e-65 216
Msa0243470 MtrunA17_Chr4g0058191 31.707 492 237 10 9 404 2 490 9.67e-65 215
Msa0243470 MtrunA17_Chr3g0101701 31.134 485 234 13 3 387 8 492 1.31e-64 215
Msa0243470 MtrunA17_Chr7g0235551 29.225 503 246 12 6 401 7 506 1.75e-64 214
Msa0243470 MtrunA17_Chr7g0254641 32.017 481 210 12 31 398 36 512 2.11e-64 214
Msa0243470 MtrunA17_Chr5g0403351 31.223 458 212 12 32 387 34 490 5.89e-64 213
Msa0243470 MtrunA17_Chr5g0430101 29.939 491 245 12 4 396 8 497 8.11e-64 213
Msa0243470 MtrunA17_Chr3g0101601 29.939 491 231 11 4 390 6 487 1.08e-63 212
Msa0243470 MtrunA17_Chr3g0116681 28.958 480 242 9 7 387 11 490 1.59e-63 212
Msa0243470 MtrunA17_Chr5g0446161 29.839 496 228 12 4 390 6 490 3.17e-63 211
Msa0243470 MtrunA17_Chr5g0445381 30.879 489 221 12 6 386 38 517 4.11e-63 211
Msa0243470 MtrunA17_Chr6g0451741 29.923 518 243 11 1 398 25 542 5.54e-63 212
Msa0243470 MtrunA17_Chr6g0472311 30.452 509 237 10 2 397 10 514 6.85e-63 211
Msa0243470 MtrunA17_Chr4g0030711 32.135 473 205 13 43 406 48 513 8.85e-63 211
Msa0243470 MtrunA17_Chr6g0463791 32.165 485 223 13 9 390 8 489 9.15e-63 210
Msa0243470 MtrunA17_Chr4g0056951 32.150 479 227 9 15 396 27 504 9.38e-63 210
Msa0243470 MtrunA17_Chr4g0076161 31.643 493 216 14 5 384 3 487 1.29e-62 209
Msa0243470 MtrunA17_Chr3g0101691 30.738 488 238 11 3 390 8 495 1.29e-62 209
Msa0243470 MtrunA17_Chr5g0446151 30.303 462 210 12 31 390 40 491 1.30e-62 209
Msa0243470 MtrunA17_Chr7g0258211 29.718 461 210 8 41 393 48 502 2.49e-62 209
Msa0243470 MtrunA17_Chr6g0451641 30.297 505 231 14 9 398 15 513 3.65e-62 209
Msa0243470 MtrunA17_Chr8g0362701 29.362 470 227 10 43 410 46 512 3.83e-62 208
Msa0243470 MtrunA17_Chr8g0390881 31.365 491 233 13 1 388 3 492 4.87e-62 208
Msa0243470 MtrunA17_Chr3g0101621 30.480 479 232 12 4 387 6 478 5.85e-62 207
Msa0243470 MtrunA17_Chr5g0445461 29.472 492 233 11 5 390 7 490 8.54e-62 207
Msa0243470 MtrunA17_Chr6g0484841 31.410 468 212 9 25 388 30 492 1.02e-61 207
Msa0243470 MtrunA17_Chr4g0020041 27.701 509 254 10 1 401 1 503 1.51e-61 207
Msa0243470 MtrunA17_Chr1g0213671 30.000 490 234 12 14 396 16 503 1.72e-61 207
Msa0243470 MtrunA17_Chr3g0101731 29.209 493 237 12 1 390 8 491 2.84e-61 206
Msa0243470 MtrunA17_Chr3g0101581 27.435 503 255 10 1 399 5 501 5.68e-61 205
Msa0243470 MtrunA17_Chr3g0101661 30.247 486 228 11 7 387 12 491 6.81e-61 205
Msa0243470 MtrunA17_Chr6g0451681 30.490 469 228 10 4 398 29 473 7.17e-61 204
Msa0243470 MtrunA17_Chr4g0024771 30.937 459 207 12 31 387 37 487 8.71e-61 204
Msa0243470 MtrunA17_Chr1g0160851 30.228 483 238 12 9 394 11 491 1.87e-60 204
Msa0243470 MtrunA17_Chr3g0101711 29.920 498 246 12 4 401 11 505 4.78e-60 203
Msa0243470 MtrunA17_Chr5g0430031 29.954 434 208 8 33 370 38 471 1.10e-59 202
Msa0243470 MtrunA17_Chr5g0431641 30.020 493 229 12 5 390 7 490 1.18e-59 202
Msa0243470 MtrunA17_Chr5g0405001 30.103 485 232 13 9 388 19 501 1.56e-59 202
Msa0243470 MtrunA17_Chr2g0304871 29.065 492 241 8 15 398 20 511 1.94e-59 201
Msa0243470 MtrunA17_Chr1g0174431 46.860 207 93 4 209 401 1 204 2.03e-59 192
Msa0243470 MtrunA17_Chr3g0101651 29.586 507 245 10 1 401 6 506 2.28e-59 201
Msa0243470 MtrunA17_Chr5g0431671 29.806 463 214 10 31 390 37 491 2.75e-59 201
Msa0243470 MtrunA17_Chr5g0395381 30.310 452 241 11 1 382 7 454 3.78e-59 199
Msa0243470 MtrunA17_Chr5g0395331 28.926 484 228 12 1 382 17 486 5.56e-59 200
Msa0243470 MtrunA17_Chr4g0011961 29.796 490 241 13 9 398 7 493 8.53e-59 199
Msa0243470 MtrunA17_Chr3g0101571 28.696 460 221 9 32 390 36 489 8.63e-59 199
Msa0243470 MtrunA17_Chr3g0101721 29.303 488 230 14 12 390 12 493 8.72e-59 199
Msa0243470 MtrunA17_Chr3g0101611 28.884 457 220 7 32 387 38 490 1.58e-58 199
Msa0243470 MtrunA17_Chr6g0466901 29.563 504 239 11 9 398 12 513 2.32e-58 199
Msa0243470 MtrunA17_Chr4g0046351 28.807 486 222 12 27 393 30 510 2.77e-58 198
Msa0243470 MtrunA17_Chr3g0094231 29.274 468 222 8 30 395 34 494 4.47e-58 197
Msa0243470 MtrunA17_Chr3g0094171 29.058 499 245 9 5 397 9 504 4.64e-58 197
Msa0243470 MtrunA17_Chr4g0058261 28.842 475 235 11 23 394 53 527 1.11e-57 197
Msa0243470 MtrunA17_Chr5g0430091 29.032 496 249 14 2 396 7 500 1.55e-57 196
Msa0243470 MtrunA17_Chr7g0265611 31.303 476 216 11 30 398 44 515 1.74e-57 196
Msa0243470 MtrunA17_Chr1g0200961 32.591 494 225 11 4 396 7 493 2.10e-57 196
Msa0243470 MtrunA17_Chr3g0082701 28.711 512 244 10 8 398 10 521 2.16e-57 196
Msa0243470 MtrunA17_Chr4g0046331 27.647 510 240 14 8 393 8 512 2.21e-57 196
Msa0243470 MtrunA17_Chr8g0356001 29.352 494 238 12 4 394 15 500 2.48e-57 196
Msa0243470 MtrunA17_Chr4g0046321 28.395 486 224 12 27 393 30 510 2.72e-57 196
Msa0243470 MtrunA17_Chr4g0008101 32.494 397 199 7 71 398 124 520 3.15e-57 196
Msa0243470 MtrunA17_Chr1g0205361 28.773 497 246 13 1 396 4 493 3.16e-57 195
Msa0243470 MtrunA17_Chr6g0451781 30.508 472 215 9 40 398 82 553 3.18e-57 196
Msa0243470 MtrunA17_Chr5g0395321 28.101 516 262 14 1 410 7 519 3.46e-57 196
Msa0243470 MtrunA17_Chr1g0207841 30.819 464 198 11 43 388 49 507 4.65e-57 195
Msa0243470 MtrunA17_Chr6g0466941 33.668 398 190 9 72 398 120 514 4.82e-57 195
Msa0243470 MtrunA17_Chr8g0361471 31.066 441 200 11 30 370 32 468 5.38e-57 195
Msa0243470 MtrunA17_Chr4g0011901 29.274 468 230 9 31 398 28 494 2.97e-56 192
Msa0243470 MtrunA17_Chr4g0039901 30.769 468 222 15 32 400 35 499 4.40e-56 192
Msa0243470 MtrunA17_Chr5g0445531 27.851 456 224 10 31 387 37 486 5.78e-56 192
Msa0243470 MtrunA17_Chr8g0351801 26.891 476 216 9 42 393 44 511 8.21e-56 192
Msa0243470 MtrunA17_Chr1g0162811 28.776 490 246 10 2 390 3 490 8.66e-56 191
Msa0243470 MtrunA17_Chr6g0465511 30.296 439 206 11 30 370 32 468 1.70e-55 191
Msa0243470 MtrunA17_Chr6g0466331 30.137 438 208 10 30 370 32 468 2.07e-55 191
Msa0243470 MtrunA17_Chr5g0431501 28.085 470 233 11 32 398 33 500 3.15e-55 190
Msa0243470 MtrunA17_Chr5g0431461 28.085 470 233 11 32 398 33 500 3.15e-55 190
Msa0243470 MtrunA17_Chr5g0431511 28.947 456 218 11 32 385 33 484 3.84e-55 190
Msa0243470 MtrunA17_Chr5g0419451 30.227 397 209 8 63 402 132 517 4.89e-55 190
Msa0243470 MtrunA17_Chr1g0156101 29.278 485 228 14 23 393 22 505 7.80e-55 189
Msa0243470 MtrunA17_Chr4g0011921 30.181 497 237 15 9 398 1 494 1.11e-54 188
Msa0243470 MtrunA17_Chr4g0046631 30.335 478 214 7 30 396 44 513 2.21e-54 188
Msa0243470 MtrunA17_Chr4g0035921 29.659 499 238 14 7 396 15 509 3.73e-54 187
Msa0243470 MtrunA17_Chr2g0310351 46.524 187 92 2 209 387 1 187 1.46e-53 177
Msa0243470 MtrunA17_Chr1g0205371 29.796 490 245 11 4 396 7 494 2.68e-53 185
Msa0243470 MtrunA17_Chr3g0101811 27.462 528 250 14 1 402 1 521 3.27e-53 185
Msa0243470 MtrunA17_Chr7g0246121 40.891 247 135 4 165 400 254 500 4.48e-53 184
Msa0243470 MtrunA17_Chr1g0160861 39.062 256 143 5 150 394 79 332 8.07e-53 179
Msa0243470 MtrunA17_Chr3g0101671 28.630 489 246 13 4 390 8 495 1.17e-52 183
Msa0243470 MtrunA17_Chr4g0011981 30.021 473 228 13 27 398 24 494 1.28e-52 183
Msa0243470 MtrunA17_Chr7g0218601 29.231 455 220 11 14 370 16 466 1.81e-52 182
Msa0243470 MtrunA17_Chr7g0246151 40.079 252 142 3 153 395 246 497 1.94e-52 182
Msa0243470 MtrunA17_Chr5g0419691 28.736 435 212 9 33 370 30 463 3.88e-52 181
Msa0243470 MtrunA17_Chr4g0011881 31.798 456 205 13 17 370 12 463 4.05e-52 181
Msa0243470 MtrunA17_Chr8g0372251 29.122 467 223 14 27 388 30 493 4.53e-52 182
Msa0243470 MtrunA17_Chr7g0246221 30.444 496 221 15 4 387 7 490 1.02e-51 181
Msa0243470 MtrunA17_Chr4g0046681 42.105 209 114 1 195 396 17 225 1.18e-51 173
Msa0243470 MtrunA17_Chr5g0406651 31.757 444 201 12 27 370 23 464 2.96e-51 179
Msa0243470 MtrunA17_Chr8g0357421 30.081 492 229 13 7 390 7 491 3.06e-51 179
Msa0243470 MtrunA17_Chr7g0218611 30.435 437 204 10 32 370 33 467 3.86e-51 179
Msa0243470 MtrunA17_Chr2g0280261 31.013 474 208 13 23 390 24 484 9.13e-51 178
Msa0243470 MtrunA17_Chr1g0198191 28.200 500 251 14 6 398 15 513 1.75e-50 177
Msa0243470 MtrunA17_Chr4g0011871 28.875 471 230 13 33 402 30 496 5.90e-50 176
Msa0243470 MtrunA17_Chr8g0355961 28.889 495 242 12 5 394 11 500 8.25e-50 176
Msa0243470 MtrunA17_Chr3g0101761 29.091 495 242 13 1 390 1 491 3.70e-49 174
Msa0243470 MtrunA17_Chr1g0210091 26.872 454 214 11 41 384 74 519 4.27e-49 174
Msa0243470 MtrunA17_Chr1g0156061 30.023 433 220 10 25 393 48 461 7.94e-49 172
Msa0243470 MtrunA17_Chr5g0432751 26.395 466 228 12 9 368 14 470 1.03e-48 172
Msa0243470 MtrunA17_Chr1g0200951 28.537 417 226 9 41 397 121 525 1.24e-48 173
Msa0243470 MtrunA17_Chr3g0101751 29.098 488 238 13 5 390 17 498 1.43e-48 172
Msa0243470 MtrunA17_Chr3g0101801 28.630 489 237 11 7 390 17 498 2.88e-48 172
Msa0243470 MtrunA17_Chr1g0164211 42.202 218 117 3 161 370 245 461 2.94e-48 171
Msa0243470 MtrunA17_Chr3g0101821 29.243 489 236 14 4 390 11 491 4.39e-48 171
Msa0243470 MtrunA17_Chr1g0162801 30.061 489 239 13 5 390 5 493 4.59e-48 171
Msa0243470 MtrunA17_Chr1g0197871 42.857 224 115 4 182 400 270 485 5.98e-48 170
Msa0243470 MtrunA17_Chr8g0390871 43.878 196 100 4 202 388 20 214 5.99e-48 163
Msa0243470 MtrunA17_Chr3g0101741 29.121 364 209 8 74 390 52 413 6.07e-48 169
Msa0243470 MtrunA17_Chr1g0176831 27.038 503 243 13 1 395 27 513 8.39e-48 170
Msa0243470 MtrunA17_Chr8g0357431 29.555 494 230 13 7 390 7 492 2.02e-47 169
Msa0243470 MtrunA17_Chr5g0431591 32.566 304 180 7 104 390 13 308 2.60e-47 164
Msa0243470 MtrunA17_Chr6g0451811 41.791 201 110 1 205 398 1 201 2.69e-47 161
Msa0243470 MtrunA17_Chr4g0046661 44.175 206 108 1 198 396 14 219 3.13e-47 161
Msa0243470 MtrunA17_Chr4g0058211 40.580 207 116 3 197 397 8 213 6.34e-47 160
Msa0243470 MtrunA17_Chr2g0314721 27.389 471 244 9 1 373 8 478 7.14e-47 167
Msa0243470 MtrunA17_Chr8g0346261 30.809 383 210 9 63 393 159 538 1.17e-46 168
Msa0243470 MtrunA17_Chr5g0430111 28.297 417 208 12 2 327 7 423 1.51e-46 165
Msa0243470 MtrunA17_Chr1g0156081 28.807 486 232 12 26 398 50 534 2.77e-46 167
Msa0243470 MtrunA17_Chr5g0430071 35.798 257 147 7 150 388 89 345 3.60e-46 162
Msa0243470 MtrunA17_Chr8g0377341 28.385 384 214 7 66 395 144 520 4.42e-46 166
Msa0243470 MtrunA17_Chr1g0197851 40.088 227 119 4 182 403 270 484 1.05e-45 164
Msa0243470 MtrunA17_Chr1g0197881 40.088 227 119 4 182 403 269 483 1.60e-45 164
Msa0243470 MtrunA17_Chr2g0314731 35.271 258 153 4 144 395 234 483 1.61e-45 164
Msa0243470 MtrunA17_Chr1g0197891 40.088 227 119 4 182 403 270 484 1.90e-45 163
Msa0243470 MtrunA17_Chr1g0167321 28.543 501 242 11 12 402 9 503 3.64e-45 163
Msa0243470 MtrunA17_Chr7g0246131 31.944 504 230 15 6 399 3 503 4.78e-45 162
Msa0243470 MtrunA17_Chr6g0451771 40.299 201 113 1 205 398 18 218 1.62e-44 154
Msa0243470 MtrunA17_Chr3g0101831 28.543 494 240 11 1 390 8 492 4.60e-44 160
Msa0243470 MtrunA17_Chr4g0011941 40.722 194 105 3 209 393 1 193 1.22e-43 151
Msa0243470 MtrunA17_Chr5g0402981 41.398 186 101 3 219 396 2 187 2.13e-43 150
Msa0243470 MtrunA17_Chr8g0364651 26.955 486 243 11 16 395 14 493 1.24e-42 156
Msa0243470 MtrunA17_Chr4g0011851 35.859 198 119 2 197 386 4 201 1.51e-42 149
Msa0243470 MtrunA17_Chr5g0446101 34.252 254 151 6 144 384 47 297 2.81e-42 151
Msa0243470 MtrunA17_Chr2g0280081 30.548 383 205 10 72 395 619 999 9.22e-40 151
Msa0243470 MtrunA17_Chr2g0280081 34.694 196 116 2 204 387 295 490 6.68e-29 119
Msa0243470 MtrunA17_Chr7g0246181 39.431 246 135 5 163 395 253 497 1.37e-38 145
Msa0243470 MtrunA17_Chr3g0101591 36.453 203 119 3 195 387 23 225 1.74e-38 139
Msa0243470 MtrunA17_Chr6g0463621 39.175 194 105 4 209 390 1 193 2.37e-38 137
Msa0243470 MtrunA17_Chr4g0074581 24.606 508 264 8 7 396 32 538 5.56e-38 144
Msa0243470 MtrunA17_Chr2g0314781 39.548 177 94 3 225 395 1 170 2.51e-37 133
Msa0243470 MtrunA17_Chr3g0086681 43.750 160 78 2 246 393 2 161 1.52e-36 131
Msa0243470 MtrunA17_Chr5g0423621 41.111 180 96 3 225 396 1 178 1.69e-36 131
Msa0243470 MtrunA17_Chr2g0280011 36.453 203 117 2 205 395 4 206 4.33e-36 131
Msa0243470 MtrunA17_Chr8g0387101 29.870 385 206 11 72 395 120 501 4.93e-36 138
Msa0243470 MtrunA17_Chr5g0409051 30.802 237 152 3 167 394 269 502 8.08e-36 137
Msa0243470 MtrunA17_Chr6g0477081 43.846 130 72 1 191 320 114 242 1.26e-35 131
Msa0243470 MtrunA17_Chr5g0445371 32.852 277 130 9 153 408 2 243 3.84e-35 130
Msa0243470 MtrunA17_Chr8g0370641 30.526 285 185 6 124 398 235 516 6.15e-35 135
Msa0243470 MtrunA17_Chr2g0280121 27.865 384 216 8 72 395 122 504 7.82e-35 135
Msa0243470 MtrunA17_Chr5g0413911 36.232 207 122 2 199 395 317 523 4.58e-34 133
Msa0243470 MtrunA17_Chr3g0107541 31.250 256 160 6 155 398 272 523 1.81e-33 131
Msa0243470 MtrunA17_Chr2g0280061 35.468 203 119 2 205 395 4 206 2.69e-33 124
Msa0243470 MtrunA17_Chr8g0370651 30.175 285 186 6 124 398 239 520 4.32e-33 130
Msa0243470 MtrunA17_Chr2g0280071 34.762 210 125 2 198 395 322 531 1.19e-32 130
Msa0243470 MtrunA17_Chr3g0105761 36.310 168 97 2 210 369 1 166 1.28e-32 122
Msa0243470 MtrunA17_Chr5g0430151 38.012 171 97 4 235 396 1 171 5.17e-32 119
Msa0243470 MtrunA17_Chr4g0046701 39.869 153 85 1 251 396 1 153 1.01e-31 118
Msa0243470 MtrunA17_Chr2g0280041 27.034 381 221 7 72 395 150 530 8.52e-31 124
Msa0243470 MtrunA17_Chr5g0430041 36.310 168 92 3 235 387 1 168 1.23e-30 115
Msa0243470 MtrunA17_Chr5g0445351 38.889 162 91 2 237 390 52 213 1.98e-30 116
Msa0243470 MtrunA17_Chr3g0107551 33.908 174 105 2 205 369 1 173 4.99e-30 115
Msa0243470 MtrunA17_Chr5g0445761 40.000 170 97 1 209 373 1 170 6.64e-29 112
Msa0243470 MtrunA17_Chr3g0107611 28.448 232 154 5 155 375 275 505 4.77e-28 115
Msa0243470 MtrunA17_Chr2g0334021 31.250 224 144 4 163 380 262 481 5.57e-27 112
Msa0243470 MtrunA17_Chr3g0116731 36.842 133 75 2 262 393 3 127 1.43e-26 103
Msa0243470 MtrunA17_Chr3g0101541 37.209 129 76 1 257 380 1 129 8.96e-26 101
Msa0243470 MtrunA17_Chr5g0444981 41.579 190 94 4 218 402 20 197 1.09e-25 103
Msa0243470 MtrunA17_Chr0c19g0493771 36.095 169 99 4 209 370 453 619 2.03e-25 108
Msa0243470 MtrunA17_Chr8g0364631 27.004 474 234 13 31 395 31 501 6.35e-24 103
Msa0243470 MtrunA17_Chr3g0117301 35.345 116 70 1 260 370 1 116 1.69e-23 94.7
Msa0243470 MtrunA17_Chr5g0445361 40.000 120 64 2 279 390 8 127 8.24e-23 93.6
Msa0243470 MtrunA17_Chr4g0028321 38.760 129 70 2 277 396 25 153 1.79e-22 93.2
Msa0243470 MtrunA17_Chr8g0372591 34.746 118 77 0 209 326 3 120 1.80e-22 92.8
Msa0243470 MtrunA17_Chr4g0076171 34.463 177 81 4 225 387 1 156 7.99e-22 91.7
Msa0243470 MtrunA17_Chr7g0248991 38.211 123 74 2 209 331 235 355 6.73e-21 93.6
Msa0243470 MtrunA17_Chr1g0204271 28.837 215 130 6 180 377 276 484 1.08e-20 94.0
Msa0243470 MtrunA17_Chr3g0141801 27.711 249 154 5 126 370 230 456 1.60e-20 93.6
Msa0243470 MtrunA17_Chr8g0387001 32.178 202 121 5 167 352 258 459 2.71e-20 92.8
Msa0243470 MtrunA17_Chr5g0396521 28.700 223 120 6 199 385 338 557 6.78e-19 89.0
Msa0243470 MtrunA17_Chr3g0128461 32.222 180 112 5 197 369 319 495 6.88e-19 88.6
Msa0243470 MtrunA17_Chr8g0351311 26.339 224 144 4 169 376 271 489 9.62e-19 88.2
Msa0243470 MtrunA17_Chr8g0381541 27.632 228 151 5 153 371 241 463 1.46e-18 87.4
Msa0243470 MtrunA17_Chr4g0030761 32.653 147 64 4 260 388 1 130 2.92e-18 81.3
Msa0243470 MtrunA17_Chr2g0288661 27.331 311 192 12 78 370 196 490 3.01e-18 86.7
Msa0243470 MtrunA17_Chr2g0313781 27.119 295 176 11 111 370 210 500 3.26e-18 86.7
Msa0243470 MtrunA17_Chr7g0215181 28.643 199 138 4 173 369 284 480 3.43e-18 86.7
Msa0243470 MtrunA17_Chr8g0351391 27.232 224 140 5 170 376 271 488 3.63e-18 86.3
Msa0243470 MtrunA17_Chr1g0203141 26.230 244 169 6 133 367 243 484 3.67e-18 86.3
Msa0243470 MtrunA17_Chr3g0135841 26.136 264 180 6 140 390 265 526 5.26e-18 85.9
Msa0243470 MtrunA17_Chr8g0381571 29.048 210 135 5 153 353 241 445 5.78e-18 85.5
Msa0243470 MtrunA17_Chr2g0293421 27.313 227 153 4 154 371 239 462 1.20e-17 84.7
Msa0243470 MtrunA17_Chr4g0056981 47.222 72 38 0 235 306 1 72 1.25e-17 77.0
Msa0243470 MtrunA17_Chr8g0364081 25.703 249 157 6 149 370 266 513 1.51e-17 84.7
Msa0243470 MtrunA17_Chr2g0313831 28.814 295 169 12 112 370 199 488 1.56e-17 84.3
Msa0243470 MtrunA17_Chr1g0179811 25.581 258 169 5 145 385 275 526 2.05e-17 84.3
Msa0243470 MtrunA17_Chr6g0472221 26.506 249 170 7 133 370 252 498 2.74e-17 84.0
Msa0243470 MtrunA17_Chr1g0203151 25.000 244 172 6 133 367 239 480 3.88e-17 83.2
Msa0243470 MtrunA17_Chr2g0293411 29.744 195 131 3 182 371 268 461 5.12e-17 82.8
Msa0243470 MtrunA17_Chr1g0164321 28.462 260 158 8 156 395 291 542 1.33e-16 81.6
Msa0243470 MtrunA17_Chr2g0286091 25.871 201 130 6 190 378 286 479 1.82e-16 81.3
Msa0243470 MtrunA17_Chr8g0380471 29.534 193 131 4 182 370 258 449 2.22e-16 80.9
Msa0243470 MtrunA17_Chr5g0404861 32.414 145 87 4 256 395 18 156 2.63e-16 75.9
Msa0243470 MtrunA17_Chr4g0044851 25.000 244 171 5 135 370 204 443 3.02e-16 80.5
Msa0243470 MtrunA17_Chr3g0104351 25.676 222 144 3 152 352 249 470 3.28e-16 80.5
Msa0243470 MtrunA17_Chr2g0313811 27.119 295 176 12 111 370 210 500 3.35e-16 80.5
Msa0243470 MtrunA17_Chr4g0004481 32.934 167 97 6 199 352 282 446 3.56e-16 80.1
Msa0243470 MtrunA17_Chr8g0351401 27.572 243 155 5 153 374 243 485 3.62e-16 80.5
Msa0243470 MtrunA17_Chr2g0313791 25.763 295 180 11 111 370 193 483 6.13e-16 79.7
Msa0243470 MtrunA17_Chr5g0400421 25.991 227 156 5 154 371 241 464 6.19e-16 79.7
Msa0243470 MtrunA17_Chr6g0449351 31.466 232 139 9 150 363 200 429 8.15e-16 79.0
Msa0243470 MtrunA17_Chr8g0371761 30.137 146 83 2 228 354 1 146 8.87e-16 73.9
Msa0243470 MtrunA17_Chr8g0348751 29.108 213 131 6 160 352 252 464 8.96e-16 79.3
Msa0243470 MtrunA17_Chr2g0313771 24.516 310 196 11 81 370 204 495 9.66e-16 79.0
Msa0243470 MtrunA17_Chr7g0262111 34.146 164 105 3 209 370 315 477 9.67e-16 79.0
Msa0243470 MtrunA17_Chr1g0151221 27.273 209 142 5 197 396 319 526 1.02e-15 79.0
Msa0243470 MtrunA17_Chr1g0163451 29.018 224 139 6 182 394 298 512 1.03e-15 79.0
Msa0243470 MtrunA17_Chr8g0369791 30.645 186 118 4 198 375 261 443 1.11e-15 78.6
Msa0243470 MtrunA17_Chr7g0226771 26.360 239 159 7 147 375 218 449 1.15e-15 78.6
Msa0243470 MtrunA17_Chr6g0479681 25.000 240 155 7 152 367 260 498 1.44e-15 78.6
Msa0243470 MtrunA17_Chr6g0457421 28.125 192 129 5 180 369 294 478 1.51e-15 78.6
Msa0243470 MtrunA17_Chr2g0313801 25.856 263 172 8 128 370 229 488 1.70e-15 78.2
Msa0243470 MtrunA17_Chr6g0449341 28.992 238 143 6 150 361 289 526 1.80e-15 78.2
Msa0243470 MtrunA17_Chr5g0429651 29.825 171 101 3 201 352 292 462 2.23e-15 77.8
Msa0243470 MtrunA17_Chr8g0354531 32.934 167 102 5 211 370 454 617 2.31e-15 78.2
Msa0243470 MtrunA17_Chr5g0443401 23.105 277 195 8 129 391 202 474 2.71e-15 77.4
Msa0243470 MtrunA17_Chr3g0089361 23.874 222 162 4 151 370 234 450 2.82e-15 77.4
Msa0243470 MtrunA17_Chr4g0067191 26.400 250 142 7 155 369 244 486 4.72e-15 77.0
Msa0243470 MtrunA17_Chr1g0154731 25.965 285 186 9 107 369 193 474 4.85e-15 76.6
Msa0243470 MtrunA17_Chr6g0478161 26.562 192 130 4 199 380 284 474 6.43e-15 76.3
Msa0243470 MtrunA17_Chr8g0354511 26.923 312 191 11 78 370 203 496 8.15e-15 76.3
Msa0243470 MtrunA17_Chr3g0089351 23.874 222 162 5 151 370 152 368 9.45e-15 75.5
Msa0243470 MtrunA17_Chr2g0313821 25.338 296 180 11 111 370 198 488 9.99e-15 75.9
Msa0243470 MtrunA17_Chr5g0408181 28.962 183 119 3 198 372 259 438 1.36e-14 75.5
Msa0243470 MtrunA17_Chr2g0308651 28.333 180 120 5 199 370 209 387 1.37e-14 75.1
Msa0243470 MtrunA17_Chr8g0334941 30.387 181 113 4 202 370 121 300 1.60e-14 74.3
Msa0243470 MtrunA17_Chr4g0038271 24.696 247 164 5 140 364 280 526 1.72e-14 75.1
Msa0243470 MtrunA17_Chr2g0313761 30.994 171 106 5 211 373 320 486 2.28e-14 74.7
Msa0243470 MtrunA17_Chr1g0193811 27.660 235 151 7 154 374 263 492 2.47e-14 74.7
Msa0243470 MtrunA17_Chr1g0176851 32.500 120 80 1 144 263 116 234 2.61e-14 72.0
Msa0243470 MtrunA17_Chr6g0449381 29.091 220 139 6 150 352 240 459 2.99e-14 74.3
Msa0243470 MtrunA17_Chr8g0334891 30.387 181 113 4 202 370 276 455 3.33e-14 74.3
Msa0243470 MtrunA17_Chr8g0362731 27.826 230 145 8 150 373 169 383 3.49e-14 73.9
Msa0243470 MtrunA17_Chr6g0449361 29.565 230 146 7 150 363 240 469 4.51e-14 73.9
Msa0243470 MtrunA17_Chr5g0403451 28.251 223 121 7 182 369 32 250 5.51e-14 72.0
Msa0243470 MtrunA17_Chr4g0063221 28.313 166 110 4 207 365 323 486 6.59e-14 73.6
Msa0243470 MtrunA17_Chr1g0164371 27.374 179 121 4 198 370 274 449 8.10e-14 72.8
Msa0243470 MtrunA17_Chr2g0313751 31.138 167 105 5 211 370 352 515 8.22e-14 73.2
Msa0243470 MtrunA17_Chr5g0400411 25.116 215 148 5 167 371 252 463 8.48e-14 72.8
Msa0243470 MtrunA17_Chr8g0339861 25.217 230 162 4 154 375 237 464 8.53e-14 72.8
Msa0243470 MtrunA17_Chr8g0372711 24.364 275 189 7 141 401 221 490 9.07e-14 72.8
Msa0243470 MtrunA17_Chr8g0388921 23.140 484 278 17 1 402 1 472 9.20e-14 72.8
Msa0243470 MtrunA17_Chr8g0354541 33.987 153 91 5 225 370 1 150 1.32e-13 68.9
Msa0243470 MtrunA17_Chr7g0227281 29.630 216 136 6 150 352 236 448 1.32e-13 72.4
Msa0243470 MtrunA17_Chr7g0227291 33.113 151 90 4 209 348 294 444 1.77e-13 72.0
Msa0243470 MtrunA17_Chr8g0372411 25.200 250 170 9 154 393 231 473 3.35e-13 71.2
Msa0243470 MtrunA17_Chr4g0014051 29.940 167 107 5 211 370 337 500 7.79e-13 70.1
Msa0243470 MtrunA17_Chr7g0260831 22.660 406 234 16 31 368 77 470 9.33e-13 69.7
Msa0243470 MtrunA17_Chr1g0163351 30.180 222 119 10 154 348 243 455 1.17e-12 69.3
Msa0243470 MtrunA17_Chr5g0443731 26.697 221 146 7 167 378 240 453 1.23e-12 69.3
Msa0243470 MtrunA17_Chr4g0044841 22.892 249 164 5 152 396 241 465 1.62e-12 68.9
Msa0243470 MtrunA17_Chr1g0153371 25.523 239 167 5 140 370 207 442 1.73e-12 68.9
Msa0243470 MtrunA17_Chr3g0078411 24.324 222 159 5 161 377 228 445 2.33e-12 68.6
Msa0243470 MtrunA17_Chr8g0380501 29.885 174 109 6 187 348 269 441 5.99e-12 67.4
Msa0243470 MtrunA17_Chr5g0397971 21.681 226 168 4 151 369 220 443 1.22e-11 66.2
Msa0243470 MtrunA17_Chr1g0163501 25.287 261 168 9 150 394 238 487 1.42e-11 66.2
Msa0243470 MtrunA17_Chr1g0163281 24.051 237 156 6 150 367 257 488 2.02e-11 65.5
Msa0243470 MtrunA17_Chr8g0351461 21.308 413 245 15 32 370 74 480 2.78e-11 65.1
Msa0243470 MtrunA17_Chr1g0163491 28.235 170 111 4 209 367 321 490 3.24e-11 65.1
Msa0243470 MtrunA17_Chr8g0351421 21.446 401 236 15 44 370 86 481 3.93e-11 64.7
Msa0243470 MtrunA17_Chr8g0351441 21.945 401 234 16 44 370 85 480 4.64e-11 64.3
Msa0243470 MtrunA17_Chr1g0163211 25.000 228 148 6 174 394 278 489 5.58e-11 64.3
Msa0243470 MtrunA17_Chr1g0163461 26.222 225 144 8 182 394 293 507 5.74e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0243470 AT4G37370.1 45.585 487 165 7 9 401 7 487 3.16e-148 430
Msa0243470 AT4G37340.1 45.674 497 164 8 5 406 10 495 1.40e-147 428
Msa0243470 AT4G37330.1 43.532 487 179 6 9 404 8 489 1.65e-139 407
Msa0243470 AT4G37360.1 44.948 485 169 6 9 399 7 487 3.55e-139 407
Msa0243470 AT5G36220.1 44.177 498 172 8 7 406 11 500 3.16e-136 400
Msa0243470 AT4G37320.1 43.265 490 177 8 9 403 8 491 2.92e-135 397
Msa0243470 AT1G66540.1 51.070 374 134 3 73 399 3 374 6.03e-133 387
Msa0243470 AT3G28740.1 46.709 471 151 7 31 406 38 503 6.67e-128 379
Msa0243470 AT5G57220.1 41.358 486 183 5 14 406 13 489 1.32e-125 372
Msa0243470 AT5G67310.1 40.447 492 198 7 1 402 15 501 2.92e-124 369
Msa0243470 AT4G37430.1 39.357 498 199 6 4 402 1 494 9.50e-123 365
Msa0243470 AT2G23190.1 40.688 494 193 7 6 404 48 536 9.63e-122 364
Msa0243470 AT4G37400.1 39.200 500 194 7 4 402 1 491 8.51e-119 355
Msa0243470 AT2G23220.1 41.393 488 181 9 16 406 31 510 1.26e-114 345
Msa0243470 AT4G37310.1 41.551 503 185 10 9 406 8 506 7.52e-114 343
Msa0243470 AT4G37410.1 37.673 507 205 11 6 411 4 500 1.03e-111 337
Msa0243470 AT1G66540.2 59.846 259 101 2 143 399 58 315 3.90e-111 329
Msa0243470 AT5G36220.2 48.930 327 118 3 127 406 30 354 5.85e-109 325
Msa0243470 AT5G10600.1 33.881 487 217 8 11 401 30 507 7.02e-88 276
Msa0243470 AT5G10610.1 34.483 493 213 10 4 398 8 488 1.73e-85 269
Msa0243470 AT5G07990.1 33.669 496 225 10 1 393 1 495 3.92e-82 261
Msa0243470 AT5G06900.1 31.102 508 238 14 1 408 1 496 5.97e-76 245
Msa0243470 AT1G74550.1 29.400 483 241 8 9 399 5 479 1.13e-72 236
Msa0243470 AT4G12300.1 31.237 493 230 8 7 396 18 504 8.75e-72 234
Msa0243470 AT2G40890.1 27.879 495 249 8 5 397 4 492 9.40e-70 229
Msa0243470 AT3G26270.1 30.769 468 222 9 30 396 30 496 2.57e-68 225
Msa0243470 AT3G25180.1 31.737 501 223 11 8 397 11 503 3.92e-68 224
Msa0243470 AT3G26280.1 31.064 470 219 11 30 396 30 497 9.62e-68 223
Msa0243470 AT3G26280.2 31.263 467 216 11 30 393 47 511 1.27e-67 223
Msa0243470 AT4G12320.1 31.772 491 232 11 7 396 18 506 1.66e-66 220
Msa0243470 AT5G25120.1 29.150 494 237 10 5 394 3 487 1.44e-65 218
Msa0243470 AT5G25180.1 29.817 493 238 12 4 394 1 487 2.34e-65 217
Msa0243470 AT3G20950.1 30.966 507 232 16 5 401 13 511 2.57e-65 218
Msa0243470 AT3G20940.1 29.684 475 223 14 26 395 36 504 2.76e-65 217
Msa0243470 AT5G25140.1 30.040 496 228 13 5 393 3 486 5.44e-65 216
Msa0243470 AT5G25130.1 29.065 492 240 9 5 394 3 487 1.29e-64 215
Msa0243470 AT4G31940.1 35.252 417 191 11 54 396 102 513 1.71e-64 215
Msa0243470 AT3G26230.1 31.727 498 229 15 1 394 1 491 5.99e-64 213
Msa0243470 AT1G13080.1 30.242 496 243 11 1 394 1 495 7.52e-64 213
Msa0243470 AT4G12330.1 31.637 452 211 10 41 395 55 505 9.85e-64 213
Msa0243470 AT1G74540.1 28.571 483 241 8 9 394 5 480 1.95e-63 212
Msa0243470 AT2G45560.1 31.463 499 230 14 4 396 11 503 2.47e-63 212
Msa0243470 AT2G14100.1 34.184 392 184 12 69 395 120 502 3.75e-63 211
Msa0243470 AT3G20080.2 29.851 469 218 10 31 394 41 503 2.80e-62 209
Msa0243470 AT3G20080.1 29.851 469 218 10 31 394 41 503 2.80e-62 209
Msa0243470 AT3G48280.1 30.316 475 237 12 15 397 13 485 2.81e-62 209
Msa0243470 AT3G20130.2 31.235 429 211 12 43 394 53 474 6.63e-62 207
Msa0243470 AT3G20110.1 29.592 490 237 12 4 396 15 493 2.69e-61 206
Msa0243470 AT3G20130.1 32.143 392 194 10 68 394 118 502 4.46e-61 206
Msa0243470 AT1G01280.1 32.120 467 202 12 41 398 41 501 4.95e-61 206
Msa0243470 AT4G15380.1 30.946 391 205 9 68 403 123 503 5.74e-61 206
Msa0243470 AT3G48310.1 29.654 462 228 14 31 399 31 488 9.45e-61 204
Msa0243470 AT5G44620.1 30.482 456 212 9 41 395 55 506 1.78e-60 204
Msa0243470 AT3G32047.1 33.163 392 191 11 69 397 119 502 2.67e-60 204
Msa0243470 AT4G15350.1 32.234 394 199 10 68 401 116 501 2.79e-60 204
Msa0243470 AT4G12310.1 31.223 458 211 10 41 396 53 508 3.07e-60 204
Msa0243470 AT4G13310.1 29.583 480 231 10 19 396 19 493 6.93e-60 202
Msa0243470 AT3G20120.4 32.995 394 198 9 66 401 120 505 7.34e-60 203
Msa0243470 AT3G48270.1 29.067 461 230 13 30 397 29 485 1.11e-59 202
Msa0243470 AT4G22710.1 32.391 389 201 8 63 396 132 513 1.20e-59 202
Msa0243470 AT4G22690.1 32.391 389 201 8 63 396 163 544 1.46e-59 203
Msa0243470 AT4G31970.1 33.163 392 193 7 71 393 118 509 1.54e-59 202
Msa0243470 AT2G24180.1 29.374 463 229 8 27 393 31 491 4.74e-59 200
Msa0243470 AT1G50520.1 30.052 386 206 7 68 395 126 505 5.71e-59 201
Msa0243470 AT1G13110.1 29.289 478 220 11 1 369 1 469 1.11e-58 199
Msa0243470 AT5G42580.1 34.121 381 191 12 68 395 115 488 1.48e-58 199
Msa0243470 AT4G13290.1 28.661 478 230 9 19 396 20 486 2.11e-58 198
Msa0243470 AT4G15330.2 28.700 446 236 11 31 402 37 474 2.42e-58 198
Msa0243470 AT2G27000.1 30.687 466 206 17 43 401 50 505 2.45e-58 199
Msa0243470 AT4G15360.1 28.889 495 240 16 4 393 11 498 8.41e-58 197
Msa0243470 AT4G31950.1 29.940 501 246 10 1 396 1 501 1.42e-57 197
Msa0243470 AT3G20140.1 28.903 474 225 13 31 403 41 503 1.05e-56 194
Msa0243470 AT3G26160.1 28.287 502 249 13 4 401 8 502 2.40e-56 193
Msa0243470 AT5G47990.1 29.590 463 213 13 43 401 53 506 2.67e-56 193
Msa0243470 AT4G15330.1 27.637 474 233 12 31 402 37 502 4.14e-56 193
Msa0243470 AT3G48300.1 29.688 448 224 12 34 393 31 475 5.67e-56 192
Msa0243470 AT3G48300.2 29.688 448 224 12 34 393 33 477 5.92e-56 192
Msa0243470 AT2G25160.1 30.080 502 230 14 9 393 8 505 1.48e-55 192
Msa0243470 AT2G45550.1 42.616 237 126 3 161 387 258 494 2.09e-55 191
Msa0243470 AT3G26320.1 27.542 472 229 10 33 396 32 498 3.40e-55 190
Msa0243470 AT3G48290.1 28.632 475 231 13 21 396 21 486 3.92e-55 190
Msa0243470 AT3G20120.2 36.242 298 174 6 116 401 76 369 9.91e-55 186
Msa0243470 AT3G20120.3 36.242 298 174 6 116 401 76 369 9.91e-55 186
Msa0243470 AT3G20120.1 36.242 298 174 6 116 401 76 369 9.91e-55 186
Msa0243470 AT3G61040.1 29.935 461 218 12 33 393 34 489 1.23e-54 189
Msa0243470 AT3G20080.4 35.915 284 166 6 125 394 85 366 1.62e-54 185
Msa0243470 AT3G20080.5 35.915 284 166 6 125 394 85 366 1.62e-54 185
Msa0243470 AT3G20080.6 35.915 284 166 6 125 394 85 366 1.62e-54 185
Msa0243470 AT3G20080.3 35.915 284 166 6 125 394 85 366 1.62e-54 185
Msa0243470 AT3G20100.1 29.060 468 217 15 41 403 50 507 3.22e-54 188
Msa0243470 AT3G26200.1 30.998 471 209 10 32 393 28 491 5.62e-54 187
Msa0243470 AT2G42250.1 28.145 469 224 9 32 393 41 503 6.25e-54 187
Msa0243470 AT3G26170.1 26.978 493 254 12 6 394 5 495 7.27e-54 187
Msa0243470 AT3G26180.1 27.778 468 233 11 31 394 29 495 1.17e-53 186
Msa0243470 AT3G26330.1 27.350 468 230 8 27 390 26 487 1.20e-53 186
Msa0243470 AT2G27010.1 41.365 249 121 9 167 401 246 483 1.26e-53 186
Msa0243470 AT1G13710.1 31.156 398 210 9 61 401 121 511 1.79e-53 186
Msa0243470 AT3G20090.2 29.348 460 219 15 43 401 54 508 1.86e-53 186
Msa0243470 AT2G45570.1 43.049 223 119 2 182 396 282 504 4.56e-53 185
Msa0243470 AT3G26300.1 27.049 488 244 10 9 390 6 487 4.84e-53 184
Msa0243470 AT3G20935.1 41.667 216 109 6 197 401 124 333 6.06e-53 180
Msa0243470 AT3G26220.1 31.187 497 234 14 1 393 1 493 1.22e-52 183
Msa0243470 AT1G33730.1 35.366 328 185 7 86 395 48 366 4.30e-52 179
Msa0243470 AT1G33730.2 35.366 328 185 7 86 395 48 366 4.30e-52 179
Msa0243470 AT3G26310.1 26.337 486 249 9 9 390 6 486 4.52e-52 182
Msa0243470 AT1G13090.2 28.322 459 226 12 32 389 28 484 9.79e-52 181
Msa0243470 AT5G57260.1 26.850 473 236 7 20 386 18 486 1.52e-51 181
Msa0243470 AT4G31500.1 27.389 471 229 10 20 382 17 482 1.56e-51 180
Msa0243470 AT3G48290.2 27.255 499 233 14 21 396 21 512 3.08e-51 180
Msa0243470 AT2G30770.1 28.205 468 235 14 31 400 32 496 3.16e-51 179
Msa0243470 AT3G48320.1 30.146 481 239 13 13 399 11 488 4.37e-51 179
Msa0243470 AT3G26180.2 30.263 380 202 9 31 394 29 361 5.73e-51 176
Msa0243470 AT1G50560.1 29.442 394 210 9 68 403 127 510 8.64e-51 179
Msa0243470 AT3G26150.1 27.071 495 250 12 4 394 8 495 1.19e-50 178
Msa0243470 AT3G61880.1 31.068 412 207 11 48 395 126 524 8.21e-50 176
Msa0243470 AT3G20090.1 36.015 261 148 8 155 401 115 370 1.05e-49 173
Msa0243470 AT3G20960.1 30.576 399 203 13 68 401 14 403 1.21e-49 173
Msa0243470 AT3G61880.2 30.691 391 206 8 63 395 141 524 1.44e-49 176
Msa0243470 AT2G46660.1 29.087 471 222 13 26 395 64 523 1.66e-49 176
Msa0243470 AT3G26190.1 29.512 471 216 11 32 393 28 491 1.86e-49 175
Msa0243470 AT5G04330.1 28.092 477 229 12 29 396 29 500 2.66e-49 175
Msa0243470 AT3G26210.1 31.658 398 200 12 58 393 106 493 3.17e-49 174
Msa0243470 AT5G06905.1 26.708 483 233 10 7 375 8 483 5.20e-49 174
Msa0243470 AT3G20960.2 30.576 399 203 13 68 401 117 506 7.08e-49 174
Msa0243470 AT3G44250.1 30.835 467 214 12 32 393 28 490 1.12e-48 172
Msa0243470 AT1G33720.4 38.367 245 141 3 162 396 127 371 2.98e-48 169
Msa0243470 AT1G33720.3 38.367 245 141 3 162 396 127 371 2.98e-48 169
Msa0243470 AT1G33720.5 38.367 245 141 3 162 396 127 371 2.98e-48 169
Msa0243470 AT1G13080.2 37.354 257 149 5 150 394 121 377 4.21e-48 168
Msa0243470 AT1G33720.2 43.000 200 106 2 205 396 197 396 1.01e-47 168
Msa0243470 AT1G01190.1 28.118 473 220 13 26 393 67 524 1.32e-47 171
Msa0243470 AT1G01190.2 28.118 473 220 13 26 393 72 529 1.41e-47 171
Msa0243470 AT1G33720.1 38.367 245 141 3 162 396 259 503 3.43e-47 169
Msa0243470 AT3G26830.1 26.722 479 242 14 9 383 5 478 4.55e-47 168
Msa0243470 AT2G45580.2 38.865 229 127 5 182 402 129 352 5.20e-47 165
Msa0243470 AT1G28430.1 28.205 390 219 9 71 401 119 506 1.75e-46 167
Msa0243470 AT3G53280.1 29.374 463 225 11 32 393 28 489 1.80e-46 167
Msa0243470 AT1G13100.1 28.462 390 214 11 59 389 101 484 2.84e-46 166
Msa0243470 AT5G35715.1 28.496 379 211 9 74 393 52 429 3.63e-46 165
Msa0243470 AT2G45580.1 38.865 229 127 5 182 402 283 506 5.32e-46 166
Msa0243470 AT4G36220.1 27.119 472 221 11 40 396 48 511 6.20e-46 166
Msa0243470 AT5G09970.1 28.632 468 224 13 34 397 71 532 7.11e-46 166
Msa0243470 AT3G10560.1 27.932 469 234 12 31 398 45 510 8.88e-45 162
Msa0243470 AT2G30750.1 28.785 469 231 15 31 400 32 496 1.38e-44 162
Msa0243470 AT2G30490.1 29.213 356 185 7 74 368 120 469 2.54e-44 161
Msa0243470 AT3G52970.1 40.826 218 117 4 191 396 292 509 2.76e-44 161
Msa0243470 AT1G11610.2 27.887 459 230 12 31 391 32 487 3.13e-44 161
Msa0243470 AT3G52970.2 40.826 218 117 4 191 396 306 523 3.52e-44 161
Msa0243470 AT5G04630.1 26.389 504 258 12 4 399 9 507 4.29e-44 160
Msa0243470 AT1G64940.1 36.287 237 141 4 168 397 272 505 4.42e-44 160
Msa0243470 AT1G11610.1 28.387 465 230 14 31 396 32 492 8.17e-44 159
Msa0243470 AT1G74110.1 28.536 403 222 9 61 401 137 535 9.32e-44 160
Msa0243470 AT2G02580.1 28.016 489 251 10 1 390 1 487 1.32e-43 159
Msa0243470 AT5G24950.1 27.586 464 230 16 31 393 31 489 1.47e-43 159
Msa0243470 AT5G42590.1 28.807 486 244 11 9 393 6 490 5.23e-43 157
Msa0243470 AT4G13770.1 26.250 480 246 17 8 382 7 483 2.21e-42 155
Msa0243470 AT1G64930.1 38.049 205 118 2 202 397 301 505 6.78e-42 154
Msa0243470 AT3G53300.1 27.975 479 232 12 30 401 26 498 8.63e-42 154
Msa0243470 AT5G24960.1 29.158 463 224 15 31 393 32 490 1.07e-41 154
Msa0243470 AT2G05180.1 28.571 392 185 10 43 340 52 442 2.95e-41 151
Msa0243470 AT3G26290.1 28.913 460 225 10 34 393 33 490 6.97e-41 152
Msa0243470 AT3G26290.2 28.913 460 225 10 34 393 46 503 7.83e-41 152
Msa0243470 AT1G64950.1 32.982 285 172 7 126 397 226 504 7.80e-40 149
Msa0243470 AT3G10570.1 28.272 382 217 11 72 398 131 510 1.56e-39 148
Msa0243470 AT2G12190.1 33.101 287 171 7 126 397 226 506 2.17e-38 145
Msa0243470 AT5G04660.1 28.534 382 215 10 73 398 130 509 2.19e-38 145
Msa0243470 AT4G13310.2 28.382 377 172 7 19 302 19 390 6.65e-38 141
Msa0243470 AT2G22330.2 31.900 279 173 8 118 382 264 539 1.44e-37 143
Msa0243470 AT2G22330.1 31.900 279 173 8 118 382 241 516 1.49e-37 143
Msa0243470 AT5G05260.1 25.934 482 258 13 12 397 8 486 6.12e-37 140
Msa0243470 AT4G39950.1 31.599 269 171 7 124 382 249 514 6.94e-37 141
Msa0243470 AT4G39950.2 31.599 269 171 7 124 382 289 554 9.51e-37 141
Msa0243470 AT1G58260.1 27.671 365 193 8 74 369 126 488 2.24e-35 137
Msa0243470 AT3G03470.1 38.028 213 117 3 198 395 292 504 2.31e-35 137
Msa0243470 AT5G05260.2 30.709 254 165 4 153 397 267 518 1.28e-34 135
Msa0243470 AT5G25900.1 33.202 253 155 6 151 396 258 503 1.95e-34 134
Msa0243470 AT5G61320.1 33.218 289 148 9 125 397 225 484 2.69e-34 133
Msa0243470 AT1G64900.1 33.793 290 162 8 126 397 223 500 1.09e-33 132
Msa0243470 AT1G79370.1 35.714 196 117 3 211 398 336 530 1.55e-33 132
Msa0243470 AT4G20240.1 25.377 398 203 10 19 326 20 413 6.29e-33 129
Msa0243470 AT1G16400.1 23.967 484 238 12 12 370 18 496 1.19e-32 129
Msa0243470 AT3G25180.2 27.525 396 168 10 8 291 11 399 1.41e-32 127
Msa0243470 AT2G25160.2 29.082 392 166 12 9 292 8 395 4.26e-31 123
Msa0243470 AT1G11600.1 25.420 476 247 11 31 399 34 508 6.00e-31 124
Msa0243470 AT3G61040.2 27.397 365 168 10 33 305 34 393 9.98e-31 122
Msa0243470 AT1G16410.1 31.280 211 129 4 176 370 287 497 2.58e-27 114
Msa0243470 AT4G20240.2 24.528 371 187 9 19 300 20 386 4.05e-25 106
Msa0243470 AT1G31800.1 35.503 169 100 4 209 370 374 540 2.07e-24 105
Msa0243470 AT1G19630.1 32.727 220 137 7 163 375 237 452 8.83e-24 103
Msa0243470 AT2G45580.3 44.628 121 66 1 182 302 283 402 2.13e-23 101
Msa0243470 AT3G53290.1 27.763 389 233 10 44 393 19 398 7.12e-23 100
Msa0243470 AT5G24960.2 27.005 374 164 12 31 306 32 394 1.67e-22 99.0
Msa0243470 AT1G19630.3 34.343 198 119 7 163 353 237 430 2.11e-22 99.4
Msa0243470 AT2G26170.2 26.894 264 178 6 140 390 167 428 8.74e-21 94.4
Msa0243470 AT5G35917.1 27.236 246 141 6 153 397 271 479 1.06e-20 94.4
Msa0243470 AT2G26170.1 26.894 264 178 6 140 390 250 511 1.15e-20 94.4
Msa0243470 AT5G24900.2 33.918 171 101 6 207 369 215 381 1.77e-20 93.2
Msa0243470 AT5G24900.1 33.918 171 101 6 207 369 332 498 3.17e-20 93.2
Msa0243470 AT3G14610.1 30.213 235 149 6 148 370 253 484 3.58e-20 92.8
Msa0243470 AT3G14620.1 29.560 318 181 13 72 370 194 487 6.70e-20 92.0
Msa0243470 AT4G15110.1 28.959 221 122 4 199 385 346 565 2.00e-19 90.9
Msa0243470 AT1G47620.1 27.215 316 191 12 103 400 225 519 3.60e-19 90.1
Msa0243470 AT3G14630.1 30.472 233 150 7 148 370 250 480 3.77e-19 89.7
Msa0243470 AT3G14630.2 30.472 233 150 7 148 370 305 535 3.93e-19 90.1
Msa0243470 AT2G46950.1 30.570 193 126 4 190 376 358 548 1.18e-18 88.6
Msa0243470 AT3G53130.1 27.160 243 157 5 151 385 296 526 2.71e-18 87.4
Msa0243470 AT1G57750.1 30.168 179 112 3 199 370 296 468 3.12e-18 87.0
Msa0243470 AT5G24910.1 32.086 187 114 7 191 369 322 503 4.68e-18 86.7
Msa0243470 AT2G34490.1 25.000 276 157 10 123 378 226 471 5.09e-18 86.3
Msa0243470 AT2G44890.1 27.338 278 170 8 122 374 213 483 7.66e-18 85.9
Msa0243470 AT2G45510.1 27.126 247 160 5 148 374 237 483 1.29e-17 85.1
Msa0243470 AT5G14400.1 26.688 311 173 12 80 375 71 341 1.36e-17 84.3
Msa0243470 AT5G14400.2 26.367 311 174 11 80 375 125 395 1.81e-17 84.3
Msa0243470 AT2G44890.2 27.068 266 168 6 122 374 213 465 2.09e-17 84.3
Msa0243470 AT2G42850.1 24.042 287 179 9 129 391 209 480 3.45e-17 84.0
Msa0243470 AT5G52400.1 27.049 244 166 8 133 368 250 489 5.55e-17 83.2
Msa0243470 AT1G65340.1 27.106 273 167 8 118 368 211 473 6.33e-17 83.2
Msa0243470 AT4G39490.1 29.474 190 114 3 199 368 297 486 6.48e-17 83.2
Msa0243470 AT3G53305.1 23.810 336 198 8 59 391 42 322 7.04e-17 81.6
Msa0243470 AT3G14680.1 24.713 348 213 12 45 370 164 484 1.04e-16 82.4
Msa0243470 AT5G35920.1 36.429 140 78 4 266 396 6 143 2.29e-16 76.6
Msa0243470 AT4G39510.1 26.165 279 172 10 134 395 239 500 2.36e-16 81.3
Msa0243470 AT1G16410.2 32.812 128 80 2 176 297 287 414 2.48e-16 80.9
Msa0243470 AT3G14640.2 26.236 263 169 7 130 370 249 508 2.65e-16 81.3
Msa0243470 AT3G14640.1 26.236 263 169 7 130 370 227 486 2.67e-16 81.3
Msa0243470 AT1G05160.2 27.063 303 205 7 86 375 169 468 5.42e-16 80.1
Msa0243470 AT1G05160.1 27.063 303 205 7 86 375 169 468 5.42e-16 80.1
Msa0243470 AT1G24540.1 26.754 228 141 7 161 364 261 486 6.47e-16 80.1
Msa0243470 AT4G27710.1 28.655 171 115 4 212 376 326 495 9.20e-16 79.3
Msa0243470 AT2G34500.1 26.768 198 126 6 193 378 276 466 1.24e-15 79.0
Msa0243470 AT2G29090.3 24.749 299 201 7 80 370 78 360 1.53e-15 78.2
Msa0243470 AT2G29090.2 24.590 305 206 7 80 376 173 461 2.00e-15 78.2
Msa0243470 AT2G29090.1 24.590 305 206 7 80 376 173 461 2.00e-15 78.2
Msa0243470 AT2G23180.1 26.966 267 155 10 123 368 235 482 2.51e-15 78.2
Msa0243470 AT5G14400.3 25.902 305 171 11 80 369 125 389 3.14e-15 77.4
Msa0243470 AT2G21910.1 28.054 221 147 5 144 352 240 460 3.40e-15 77.8
Msa0243470 AT3G14650.1 28.205 234 150 8 150 370 256 484 3.47e-15 77.8
Msa0243470 AT1G11680.1 26.724 232 156 4 150 370 229 457 4.42e-15 77.4
Msa0243470 AT1G57750.2 33.077 130 80 2 199 327 296 419 4.80e-15 77.0
Msa0243470 AT5G38450.1 33.526 173 111 3 200 369 316 487 5.67e-15 77.0
Msa0243470 AT5G52320.2 30.380 158 100 3 198 348 298 452 5.92e-15 77.0
Msa0243470 AT5G52320.1 30.380 158 100 3 198 348 298 452 5.94e-15 77.0
Msa0243470 AT2G32440.2 26.087 230 162 4 151 373 235 463 6.30e-15 77.0
Msa0243470 AT2G32440.1 26.087 230 162 4 151 373 235 463 6.30e-15 77.0
Msa0243470 AT1G73340.1 23.934 305 204 9 97 393 193 477 6.67e-15 76.6
Msa0243470 AT4G39480.1 26.984 189 119 3 199 368 295 483 7.66e-15 76.6
Msa0243470 AT5G45340.1 25.490 306 203 8 78 369 140 434 9.63e-15 76.3
Msa0243470 AT5G02900.1 27.372 274 166 10 110 368 193 448 1.20e-14 75.9
Msa0243470 AT3G14660.1 26.996 263 166 9 130 370 226 484 1.22e-14 75.9
Msa0243470 AT3G14660.2 26.996 263 166 9 130 370 80 338 1.37e-14 75.1
Msa0243470 AT3G19270.2 25.346 217 154 3 164 376 233 445 1.47e-14 75.5
Msa0243470 AT4G19230.1 29.000 200 132 4 176 369 239 434 1.57e-14 75.5
Msa0243470 AT2G45970.1 28.866 194 119 4 178 352 271 464 1.71e-14 75.5
Msa0243470 AT2G46960.1 24.742 291 190 10 105 369 84 371 2.12e-14 74.7
Msa0243470 AT2G46960.2 24.742 291 190 10 105 369 200 487 2.18e-14 75.1
Msa0243470 AT1G63710.1 31.892 185 110 4 184 352 277 461 2.88e-14 75.1
Msa0243470 AT5G05690.3 25.789 190 129 4 197 377 144 330 3.04e-14 73.9
Msa0243470 AT5G05690.1 25.532 188 132 3 197 377 263 449 3.65e-14 74.3
Msa0243470 AT1G75130.1 31.447 159 106 3 211 367 315 472 3.94e-14 74.3
Msa0243470 AT4G36380.1 25.197 254 172 9 154 395 262 509 4.05e-14 74.3
Msa0243470 AT2G26710.1 29.940 167 110 3 207 367 319 484 4.44e-14 74.3
Msa0243470 AT1G34540.1 27.451 255 163 8 153 391 238 486 6.53e-14 73.9
Msa0243470 AT5G23190.1 25.630 238 153 6 150 364 270 506 8.04e-14 73.6
Msa0243470 AT5G36110.1 24.903 257 174 6 150 402 230 471 8.22e-14 73.6
Msa0243470 AT1G67110.1 31.469 143 94 3 230 369 340 481 8.64e-14 73.6
Msa0243470 AT4G00360.1 27.103 214 135 6 160 352 252 465 8.95e-14 73.6
Msa0243470 AT5G45340.2 32.099 162 100 4 198 353 261 418 9.70e-14 73.2
Msa0243470 AT4G19230.2 30.435 184 118 4 176 353 239 418 1.02e-13 73.2
Msa0243470 AT1G12740.1 22.467 227 167 4 151 370 220 444 1.14e-13 72.8
Msa0243470 AT1G12740.2 22.467 227 167 4 151 370 226 450 1.15e-13 72.8
Msa0243470 AT1G01600.1 28.723 188 115 5 184 352 280 467 1.16e-13 73.2
Msa0243470 AT3G56630.1 29.808 208 130 6 176 367 259 466 4.14e-13 71.2
Msa0243470 AT5G08250.2 24.454 229 154 4 186 395 307 535 1.10e-12 70.1
Msa0243470 AT5G08250.1 24.454 229 154 4 186 395 245 473 1.29e-12 69.7
Msa0243470 AT3G14690.2 24.522 314 203 11 72 370 225 519 2.51e-12 68.9
Msa0243470 AT3G19270.1 24.286 210 151 3 164 369 233 438 2.71e-12 68.6
Msa0243470 AT3G14690.1 24.621 264 171 8 130 370 226 484 3.19e-12 68.6
Msa0243470 AT3G50660.1 26.009 223 135 5 198 402 297 507 4.85e-12 68.2
Msa0243470 AT3G13730.1 25.203 246 173 5 153 393 247 486 5.28e-12 67.8
Msa0243470 AT5G38970.1 25.424 236 160 7 151 377 218 446 9.63e-11 63.9

Find 91 sgRNAs with CRISPR-Local

Find 281 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTGCTTTCTTTAATACTTC+TGG 0.082562 2_2:-20616439 None:intergenic
CATCGTCTTAACTCCTTCTT+AGG 0.210852 2_2:+20612224 Msa0243470:CDS
ACCCTAGGCTCCGCTGCTTA+TGG 0.213036 2_2:+20612149 Msa0243470:intron
GTCAATATTATAGTATCTTT+TGG 0.216062 2_2:-20616634 None:intergenic
AATAAAAGAATAAATGTTAA+AGG 0.218031 2_2:+20617077 Msa0243470:three_prime_UTR
GCTTTACACATAGCCCTTAA+TGG 0.229264 2_2:-20616919 None:intergenic
AAGGAGAGAGTAGTAGAATA+AGG 0.235725 2_2:-20611817 None:intergenic
CCCTAGGCTCCGCTGCTTAT+GGG 0.279757 2_2:+20612150 Msa0243470:intron
CCACCAACAATTCCTATAAT+TGG 0.292672 2_2:+20611915 Msa0243470:CDS
TTGCTTTCTTTAATACTTCT+GGG 0.297928 2_2:-20616438 None:intergenic
TGCCAATGAAGATACCATTA+AGG 0.309380 2_2:+20616905 Msa0243470:CDS
CTCACACTTCGTTACATCAT+TGG 0.325903 2_2:-20616953 None:intergenic
GTGAACAAAGTGATGGCATT+TGG 0.326236 2_2:+20616742 Msa0243470:CDS
CTCTTTCCCATTCAAAGCAT+TGG 0.332506 2_2:-20616837 None:intergenic
TGAGAATGATATCGGGAAAA+AGG 0.333160 2_2:+20612372 Msa0243470:CDS
TGCTATGATGAGAATGATAT+CGG 0.334134 2_2:+20612364 Msa0243470:CDS
AAAGCATCATCCCAACGTTT+TGG 0.340885 2_2:-20616682 None:intergenic
GAAGAATTAGACACTCAAAT+TGG 0.344604 2_2:+20616463 Msa0243470:CDS
TTTAATCAAAGGTCTAATTC+AGG 0.349158 2_2:+20614118 Msa0243470:CDS
TACGGTGGAGAGGGTGCTTT+AGG 0.350540 2_2:-20611950 None:intergenic
GCCCTTAATGGTATCTTCAT+TGG 0.374704 2_2:-20616907 None:intergenic
CTATAATATTGACCAATGTT+TGG 0.384501 2_2:+20616644 Msa0243470:CDS
ATAAAAGAATAAATGTTAAA+GGG 0.389074 2_2:+20617078 Msa0243470:three_prime_UTR
TGAACAAAGTGATGGCATTT+GGG 0.389221 2_2:+20616743 Msa0243470:CDS
TGGTGGAGGTTGCCAATTAT+AGG 0.396422 2_2:-20611927 None:intergenic
TCTTCAGAGGATTGCACCAT+TGG 0.397758 2_2:+20616598 Msa0243470:CDS
TTGTAGGGTATGCTTCTTGC+TGG 0.400519 2_2:+20616361 Msa0243470:intron
AAAGTGATGGCATTTGGGTT+AGG 0.416878 2_2:+20616748 Msa0243470:CDS
AGGAGAGAGTAGTAGAATAA+GGG 0.422160 2_2:-20611816 None:intergenic
TTGCCAATTATAGGAATTGT+TGG 0.426453 2_2:-20611918 None:intergenic
TGGCATTTGGGTTAGGAAGA+AGG 0.454895 2_2:+20616755 Msa0243470:CDS
GGCTTGTCCTGGATTAAGCT+TGG 0.466635 2_2:+20616777 Msa0243470:CDS
GGCATTTGGGTTAGGAAGAA+GGG 0.470649 2_2:+20616756 Msa0243470:CDS
TGTTGATCCAATGCTTTGAA+TGG 0.473828 2_2:+20616830 Msa0243470:CDS
ATGGTTTGAAAGAACATCAA+TGG 0.474085 2_2:-20612204 None:intergenic
TTAGGAAGAAGGGCTTGTCC+TGG 0.474533 2_2:+20616766 Msa0243470:CDS
GCCAATGAAGATACCATTAA+GGG 0.475010 2_2:+20616906 Msa0243470:CDS
AGTGAAGCCCACAGTACGTT+GGG 0.475375 2_2:-20616800 None:intergenic
CCGCTGCTTATGGGGACCAT+TGG 0.485114 2_2:+20612159 Msa0243470:CDS
AGGTTTCGGTTTCACTAAAG+TGG 0.489603 2_2:+20612307 Msa0243470:CDS
GAGGGTGCTTTAGGTGGTGG+AGG 0.492785 2_2:-20611941 None:intergenic
GACGTCGTCTCTGAAGGTTT+CGG 0.493391 2_2:+20612293 Msa0243470:CDS
TCATAGAGATCCAAAACGTT+GGG 0.494319 2_2:+20616672 Msa0243470:CDS
CTTGATATGATGGAGGGTAA+AGG 0.499389 2_2:+20616874 Msa0243470:CDS
CATCAGCAGTGACAATAGAA+TGG 0.503633 2_2:+20616392 Msa0243470:CDS
GTCTCTTCGAACTCCTAAGA+AGG 0.509833 2_2:-20612237 None:intergenic
TTGTTGGTGGACCTGGTGGA+AGG 0.511028 2_2:-20611902 None:intergenic
CTCAAAGACGTCGTCTCTGA+AGG 0.511853 2_2:+20612287 Msa0243470:CDS
TTATGATGAAGGATAGAGAA+AGG 0.516120 2_2:-20611836 None:intergenic
CCTAGGCTCCGCTGCTTATG+GGG 0.518212 2_2:+20612151 Msa0243470:intron
GGAGAGGGTGCTTTAGGTGG+TGG 0.520481 2_2:-20611944 None:intergenic
GTTGATCCAATGCTTTGAAT+GGG 0.521141 2_2:+20616831 Msa0243470:CDS
TATTCAGATCATTTAATCAA+AGG 0.521355 2_2:+20614107 Msa0243470:CDS
GTGATAGGGTTGTGAAGGTA+CGG 0.525005 2_2:-20611968 None:intergenic
CCAATTATAGGAATTGTTGG+TGG 0.525861 2_2:-20611915 None:intergenic
TTCGTTACATCATTGGCTAT+AGG 0.525948 2_2:-20616946 None:intergenic
TACTCAAAATCCAATCAAGA+AGG 0.528082 2_2:+20611871 Msa0243470:CDS
TTGTGAAGGTACGGTGGAGA+GGG 0.534164 2_2:-20611959 None:intergenic
TGGAACATTGAATTCTCCAA+TGG 0.534446 2_2:-20616614 None:intergenic
ATCAGCAGTGACAATAGAAT+GGG 0.539732 2_2:+20616393 Msa0243470:CDS
CGTTGGGCCAAGCTTAATCC+AGG 0.540139 2_2:-20616784 None:intergenic
GTTGTGAAGGTACGGTGGAG+AGG 0.541175 2_2:-20611960 None:intergenic
TGAATGGGAAAGAGAGAGTG+AGG 0.542771 2_2:+20616846 Msa0243470:CDS
TAATGGTATCTTCATTGGCA+TGG 0.543879 2_2:-20616902 None:intergenic
ATAGGAATTGTTGGTGGACC+TGG 0.546704 2_2:-20611909 None:intergenic
AAGAATAAATGTTAAAGGGA+GGG 0.546853 2_2:+20617082 Msa0243470:three_prime_UTR
AGCTTGGCCCAACGTACTGT+GGG 0.548998 2_2:+20616793 Msa0243470:CDS
AAGCTTGGCCCAACGTACTG+TGG 0.550103 2_2:+20616792 Msa0243470:CDS
TTCATAGAGATCCAAAACGT+TGG 0.555106 2_2:+20616671 Msa0243470:CDS
AAAGAATAAATGTTAAAGGG+AGG 0.558305 2_2:+20617081 Msa0243470:three_prime_UTR
GCTATGATGAGAATGATATC+GGG 0.563969 2_2:+20612365 Msa0243470:CDS
GGTGGAGAGGGTGCTTTAGG+TGG 0.564024 2_2:-20611947 None:intergenic
AAATGATCTGAATAATACTC+AGG 0.575038 2_2:-20614098 None:intergenic
AGAGGAAATATTCGTAGTGA+TGG 0.578649 2_2:+20614032 Msa0243470:CDS
TGTGGCAAAAGTAGTGGTGC+TGG 0.585312 2_2:-20616571 None:intergenic
TCTATGAATACTCCAAACAT+TGG 0.590490 2_2:-20616656 None:intergenic
TTTGCCACATTATTCTTCAG+AGG 0.594103 2_2:+20616585 Msa0243470:CDS
GGAAATATTCGTAGTGATGG+AGG 0.597253 2_2:+20614035 Msa0243470:CDS
TACGACGTAAATTACGCCAA+TGG 0.620321 2_2:-20612175 None:intergenic
AGGGGAGGTGAACAAAGTGA+TGG 0.640060 2_2:+20616735 Msa0243470:CDS
ATAGGGTTGTGAAGGTACGG+TGG 0.642335 2_2:-20611965 None:intergenic
CAGTGAAGCCCACAGTACGT+TGG 0.649130 2_2:-20616801 None:intergenic
CAATCCTCTGAAGAATAATG+TGG 0.654383 2_2:-20616589 None:intergenic
GGCAAAAGTAGTGGTGCTGG+TGG 0.657919 2_2:-20616568 None:intergenic
GGAATTGTTGGTGGACCTGG+TGG 0.661993 2_2:-20611906 None:intergenic
GAATAATGTGGCAAAAGTAG+TGG 0.664874 2_2:-20616577 None:intergenic
CCAATGGTCCCCATAAGCAG+CGG 0.674621 2_2:-20612159 None:intergenic
TTCAAAGCATTGGATCAACA+AGG 0.681474 2_2:-20616827 None:intergenic
ACGTACTGTGGGCTTCACTG+TGG 0.682091 2_2:+20616804 Msa0243470:CDS
CTCATTGAGGAACATCGCAG+AGG 0.707653 2_2:+20614014 Msa0243470:CDS
CTAAGAAGGAGTTAAGACGA+TGG 0.709813 2_2:-20612223 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATATAAATAGTTATACA+TGG - chr2_2:20613794-20613813 None:intergenic 10.0%
!! AATAAATAGATAGTAATAAA+TGG - chr2_2:20614247-20614266 None:intergenic 10.0%
!! ATTTATTACTATCTATTTAT+TGG + chr2_2:20614246-20614265 Msa0243470:intron 10.0%
!!! ATATATTTTTAAGGAATATT+TGG - chr2_2:20614571-20614590 None:intergenic 10.0%
!!! AATCTCAATATATATTTTTA+AGG - chr2_2:20614580-20614599 None:intergenic 10.0%
!!! ATTCAAATAAAAGTTTTTTT+TGG - chr2_2:20614999-20615018 None:intergenic 10.0%
!! TGTTTCATTAATAATATTAT+AGG - chr2_2:20616019-20616038 None:intergenic 10.0%
!!! ATAAAGTTTTAAATAGTAAA+TGG - chr2_2:20616057-20616076 None:intergenic 10.0%
!! AATAAAAGAATAAATGTTAA+AGG + chr2_2:20617077-20617096 Msa0243470:three_prime_UTR 10.0%
!! ATAAAAGAATAAATGTTAAA+GGG + chr2_2:20617078-20617097 Msa0243470:three_prime_UTR 10.0%
!!! GATTTTGAGTAAAATTTTTA+TGG - chr2_2:20611862-20611881 None:intergenic 15.0%
!! AAGAATGTTAACAAAAATAA+AGG - chr2_2:20613298-20613317 None:intergenic 15.0%
!!! AATTTTTGTTTTTTGAAAGA+AGG - chr2_2:20615609-20615628 None:intergenic 15.0%
!!! ATATTTTATTTGCTATAACT+CGG + chr2_2:20615306-20615325 Msa0243470:intron 15.0%
!!! AATTTTTATGGTTATGATGA+AGG - chr2_2:20611850-20611869 None:intergenic 20.0%
!!! ATTGTAAAAGATGTATTTTC+CGG - chr2_2:20612123-20612142 None:intergenic 20.0%
!!! TTTTTTTTTTATGCAGGAAT+GGG - chr2_2:20612553-20612572 None:intergenic 20.0%
!!! TTTTTTTTTTTATGCAGGAA+TGG - chr2_2:20612554-20612573 None:intergenic 20.0%
!! TTCCTGCATAAAAAAAAAAA+AGG + chr2_2:20612554-20612573 Msa0243470:intron 20.0%
!! TCCTGCATAAAAAAAAAAAA+GGG + chr2_2:20612555-20612574 Msa0243470:intron 20.0%
!!! ATTTGCTTGTTATTTGTTAA+TGG + chr2_2:20612828-20612847 Msa0243470:intron 20.0%
!!! TTTGCTTGTTATTTGTTAAT+GGG + chr2_2:20612829-20612848 Msa0243470:intron 20.0%
!! AATTTGAATAATCAATTCCT+TGG - chr2_2:20612868-20612887 None:intergenic 20.0%
!! AAATGCACAAATCTAATTTA+GGG - chr2_2:20612941-20612960 None:intergenic 20.0%
!! AAAATGCACAAATCTAATTT+AGG - chr2_2:20612942-20612961 None:intergenic 20.0%
!! TCTGATCAACAAAAAAATAA+AGG - chr2_2:20613359-20613378 None:intergenic 20.0%
!!! TATTTTTTTGTTGATCAGAT+CGG + chr2_2:20613360-20613379 Msa0243470:intron 20.0%
!! TTTGTAGATGTTTATAACTT+AGG + chr2_2:20613453-20613472 Msa0243470:intron 20.0%
!!! AGAACATTCATTTTCTTATA+TGG + chr2_2:20613496-20613515 Msa0243470:intron 20.0%
!! TTATGTCATATATAAATTCG+CGG + chr2_2:20613814-20613833 Msa0243470:intron 20.0%
!!! GTTTTTTGATCTTGATAATT+TGG + chr2_2:20613941-20613960 Msa0243470:intron 20.0%
!! TATTCAGATCATTTAATCAA+AGG + chr2_2:20614107-20614126 Msa0243470:CDS 20.0%
!! TGATAAATGAGATAAATTAG+TGG + chr2_2:20614511-20614530 Msa0243470:intron 20.0%
!! TATATTGAGATTGAGATATA+AGG + chr2_2:20614588-20614607 Msa0243470:intron 20.0%
!! ATTAAAAGTAATGTGATAGA+TGG + chr2_2:20615100-20615119 Msa0243470:intron 20.0%
!!! CAAACAAATATTTTTTGTCA+AGG + chr2_2:20615382-20615401 Msa0243470:intron 20.0%
!!! GAGTAATTTTCTTATTGAAA+AGG - chr2_2:20615781-20615800 None:intergenic 20.0%
!! TACTAAAATGACACATAATT+TGG - chr2_2:20615814-20615833 None:intergenic 20.0%
!! GTAAAAATTGCAAAATTGTT+AGG + chr2_2:20615873-20615892 Msa0243470:intron 20.0%
!!! TTTCAGAAATTATGTTTTGT+AGG - chr2_2:20616534-20616553 None:intergenic 20.0%
!!! GTCAATATTATAGTATCTTT+TGG - chr2_2:20616637-20616656 None:intergenic 20.0%
!!! ATCACCATATTTTTGTGATA+GGG - chr2_2:20611985-20612004 None:intergenic 25.0%
!!! TATCACCATATTTTTGTGAT+AGG - chr2_2:20611986-20612005 None:intergenic 25.0%
! TTGAAGAAGCTAAACAATTT+AGG + chr2_2:20612426-20612445 Msa0243470:intron 25.0%
! TGAAGAAGCTAAACAATTTA+GGG + chr2_2:20612427-20612446 Msa0243470:intron 25.0%
! ATAGAGAAAAACAAACTTGA+TGG - chr2_2:20612782-20612801 None:intergenic 25.0%
!!! TTGTTATTTGTTAATGGGTA+GGG + chr2_2:20612834-20612853 Msa0243470:intron 25.0%
! GGTTTCAAAAATCAAAATTG+GGG - chr2_2:20612920-20612939 None:intergenic 25.0%
! GGGTTTCAAAAATCAAAATT+GGG - chr2_2:20612921-20612940 None:intergenic 25.0%
! AGGGTTTCAAAAATCAAAAT+TGG - chr2_2:20612922-20612941 None:intergenic 25.0%
! TTAATTACTTTCATTCTGTG+TGG + chr2_2:20613201-20613220 Msa0243470:intron 25.0%
! GTTATACATGGAAATAAAAG+AGG - chr2_2:20613782-20613801 None:intergenic 25.0%
! TTTGTTAGGTGCTAATAATA+AGG + chr2_2:20613896-20613915 Msa0243470:intron 25.0%
! TTGTTAGGTGCTAATAATAA+GGG + chr2_2:20613897-20613916 Msa0243470:intron 25.0%
!! ATCTTGATAATTTGGAAAAG+AGG + chr2_2:20613949-20613968 Msa0243470:intron 25.0%
!! AAAAAGATCTGATGCATTTT+TGG + chr2_2:20613986-20614005 Msa0243470:CDS 25.0%
! AAATGATCTGAATAATACTC+AGG - chr2_2:20614101-20614120 None:intergenic 25.0%
! TTTAATCAAAGGTCTAATTC+AGG + chr2_2:20614118-20614137 Msa0243470:CDS 25.0%
! GTCTAATTCAGGTAATTAAT+CGG + chr2_2:20614129-20614148 Msa0243470:intron 25.0%
! AAACATGACCTCTATATTTA+TGG - chr2_2:20614165-20614184 None:intergenic 25.0%
! GTAGATAAACTAAGTAAACA+TGG - chr2_2:20614225-20614244 None:intergenic 25.0%
! TTACTATCTATTTATTGGAG+AGG + chr2_2:20614251-20614270 Msa0243470:intron 25.0%
! GTAAGATGTATTTCAATAAG+TGG - chr2_2:20614319-20614338 None:intergenic 25.0%
!!! ATAGGAACTTTTTGAGTAAA+AGG + chr2_2:20614412-20614431 Msa0243470:intron 25.0%
!! AATCTTTTAAACCGAACAAA+TGG + chr2_2:20614836-20614855 Msa0243470:intron 25.0%
!! ATCTTTTAAACCGAACAAAT+GGG + chr2_2:20614837-20614856 Msa0243470:intron 25.0%
! CAATGATACTTTGTCAAAAA+AGG - chr2_2:20615536-20615555 None:intergenic 25.0%
! ATAGTCTTCAATTACGAAAT+TGG + chr2_2:20616189-20616208 Msa0243470:intron 25.0%
! AATAACTTCAAATGAGTTGT+AGG + chr2_2:20616345-20616364 Msa0243470:intron 25.0%
! ATAACTTCAAATGAGTTGTA+GGG + chr2_2:20616346-20616365 Msa0243470:intron 25.0%
! TTGCTTTCTTTAATACTTCT+GGG - chr2_2:20616441-20616460 None:intergenic 25.0%
! TTTGCTTTCTTTAATACTTC+TGG - chr2_2:20616442-20616461 None:intergenic 25.0%
!! GAAATTATGTTTTGTAGGTA+TGG - chr2_2:20616529-20616548 None:intergenic 25.0%
! CTATAATATTGACCAATGTT+TGG + chr2_2:20616644-20616663 Msa0243470:CDS 25.0%
! AAAGAATAAATGTTAAAGGG+AGG + chr2_2:20617081-20617100 Msa0243470:three_prime_UTR 25.0%
! AAGAATAAATGTTAAAGGGA+GGG + chr2_2:20617082-20617101 Msa0243470:three_prime_UTR 25.0%
TTATGATGAAGGATAGAGAA+AGG - chr2_2:20611839-20611858 None:intergenic 30.0%
TACTCAAAATCCAATCAAGA+AGG + chr2_2:20611871-20611890 Msa0243470:CDS 30.0%
TTGCCAATTATAGGAATTGT+TGG - chr2_2:20611921-20611940 None:intergenic 30.0%
ACAACCCTATCACAAAAATA+TGG + chr2_2:20611978-20611997 Msa0243470:CDS 30.0%
! ATGGTGATATCTTTTCACTT+TGG + chr2_2:20611997-20612016 Msa0243470:CDS 30.0%
! GATATCTTTTCACTTTGGTT+CGG + chr2_2:20612002-20612021 Msa0243470:CDS 30.0%
!!! CGCTAAAATGATGTCATTTT+TGG - chr2_2:20612081-20612100 None:intergenic 30.0%
! TTTTACAATTACACAACCCT+AGG + chr2_2:20612134-20612153 Msa0243470:intron 30.0%
ATGGTTTGAAAGAACATCAA+TGG - chr2_2:20612207-20612226 None:intergenic 30.0%
TGCTATGATGAGAATGATAT+CGG + chr2_2:20612364-20612383 Msa0243470:CDS 30.0%
!! ATATCGGGAAAAAGGTATTA+TGG + chr2_2:20612380-20612399 Msa0243470:intron 30.0%
!! AAAAGGTATTATGGAGATGA+TGG + chr2_2:20612389-20612408 Msa0243470:intron 30.0%
!!! GCCCTTTTTTTTTTTTATGC+AGG - chr2_2:20612559-20612578 None:intergenic 30.0%
!! CTTGTTATTTGTTAATGGGT+AGG + chr2_2:20612833-20612852 Msa0243470:intron 30.0%
TCTGTGTGGTTATACTTATA+CGG + chr2_2:20613215-20613234 Msa0243470:intron 30.0%
! GTGATTTTTGTTGAGAGAAT+TGG + chr2_2:20613240-20613259 Msa0243470:intron 30.0%
!! TTATATGGCTTTGATATTGC+CGG + chr2_2:20613511-20613530 Msa0243470:intron 30.0%
ATATTTAGCACGCTATTATC+AGG + chr2_2:20613703-20613722 Msa0243470:intron 30.0%
AGTGAGATTATGTCTTTGTT+AGG + chr2_2:20613882-20613901 Msa0243470:intron 30.0%
AGATCAAAAAACCTTAACAG+AGG - chr2_2:20613933-20613952 None:intergenic 30.0%
!!! ATTGATCATCTTTTGAAGCT+TGG + chr2_2:20614065-20614084 Msa0243470:CDS 30.0%
GCAAATTCACACTCAAATAT+AGG + chr2_2:20614394-20614413 Msa0243470:intron 30.0%
GTTAAAACACAATGAGTGTA+TGG - chr2_2:20614681-20614700 None:intergenic 30.0%
AAACAAGAGAAAGTAAGATG+AGG - chr2_2:20614714-20614733 None:intergenic 30.0%
TTGTACAAATAACGTTACTC+AGG + chr2_2:20614789-20614808 Msa0243470:intron 30.0%
CTCTTGAACAATTCGTTATT+TGG - chr2_2:20614885-20614904 None:intergenic 30.0%
TATTTGTTTGTGTGTAATCG+TGG - chr2_2:20615372-20615391 None:intergenic 30.0%
AGTGTTATACTGATGTTATG+TGG - chr2_2:20615568-20615587 None:intergenic 30.0%
AAATTGCAAAATTGTTAGGC+CGG + chr2_2:20615877-20615896 Msa0243470:intron 30.0%
GTAAACTCACATACACAAAA+TGG - chr2_2:20615935-20615954 None:intergenic 30.0%
GAAGAATTAGACACTCAAAT+TGG + chr2_2:20616463-20616482 Msa0243470:CDS 30.0%
TCTATGAATACTCCAAACAT+TGG - chr2_2:20616659-20616678 None:intergenic 30.0%
TGAGGAAAAACTTGATATGA+TGG + chr2_2:20616864-20616883 Msa0243470:CDS 30.0%
! GAAAAACTTGATATGATGGA+GGG + chr2_2:20616868-20616887 Msa0243470:CDS 30.0%
AGGAGAGAGTAGTAGAATAA+GGG - chr2_2:20611819-20611838 None:intergenic 35.0%
AAGGAGAGAGTAGTAGAATA+AGG - chr2_2:20611820-20611839 None:intergenic 35.0%
!!! GGTTTTTTAGCCTTCTTGAT+TGG - chr2_2:20611884-20611903 None:intergenic 35.0%
CCAATTATAGGAATTGTTGG+TGG - chr2_2:20611918-20611937 None:intergenic 35.0%
CCACCAACAATTCCTATAAT+TGG + chr2_2:20611915-20611934 Msa0243470:CDS 35.0%
! TTTTTGTGATAGGGTTGTGA+AGG - chr2_2:20611976-20611995 None:intergenic 35.0%
! AAGCATTCATGGACTAAAGA+CGG - chr2_2:20612056-20612075 None:intergenic 35.0%
!!! CATTTTTGGTGAAGCATTCA+TGG - chr2_2:20612067-20612086 None:intergenic 35.0%
GCTATGATGAGAATGATATC+GGG + chr2_2:20612365-20612384 Msa0243470:CDS 35.0%
TGAGAATGATATCGGGAAAA+AGG + chr2_2:20612372-20612391 Msa0243470:CDS 35.0%
GAGATAATAAGTGAGATCAG+TGG + chr2_2:20612449-20612468 Msa0243470:intron 35.0%
! CTCCTACTTTGTTTGGTAAA+AGG + chr2_2:20612515-20612534 Msa0243470:intron 35.0%
GAGAAAAACAAACTTGATGG+AGG - chr2_2:20612779-20612798 None:intergenic 35.0%
CACAAAACAAAAGCAACGTT+TGG - chr2_2:20613060-20613079 None:intergenic 35.0%
TGCTGAAAAAGCTCTTTCAA+CGG - chr2_2:20613549-20613568 None:intergenic 35.0%
!!! TGAAAGAGCTTTTTCAGCAA+TGG + chr2_2:20613550-20613569 Msa0243470:intron 35.0%
AAAGACATAATCTCACTCAG+TGG - chr2_2:20613879-20613898 None:intergenic 35.0%
!!! GTGATTTTTTGCCTCTGTTA+AGG + chr2_2:20613919-20613938 Msa0243470:intron 35.0%
!! AAGATCTGATGCATTTTTGG+AGG + chr2_2:20613989-20614008 Msa0243470:CDS 35.0%
!! AGATCTGATGCATTTTTGGA+GGG + chr2_2:20613990-20614009 Msa0243470:CDS 35.0%
AGAGGAAATATTCGTAGTGA+TGG + chr2_2:20614032-20614051 Msa0243470:CDS 35.0%
ACCTTCGTCCATAAATATAG+AGG + chr2_2:20614154-20614173 Msa0243470:intron 35.0%
ACCTCTATATTTATGGACGA+AGG - chr2_2:20614158-20614177 None:intergenic 35.0%
GGAGAGGAGATAAATATGAA+AGG + chr2_2:20614267-20614286 Msa0243470:intron 35.0%
ACCAGTTAAACCCATTTGTT+CGG - chr2_2:20614850-20614869 None:intergenic 35.0%
! GGTAATTTAGAGTTCGATCA+AGG - chr2_2:20614966-20614985 None:intergenic 35.0%
TGATCGAACTCTAAATTACC+AGG + chr2_2:20614966-20614985 Msa0243470:intron 35.0%
ACTTTCTTACTGATGCTATG+TGG - chr2_2:20615225-20615244 None:intergenic 35.0%
CAAACAAATCTGAGTAGTCA+AGG + chr2_2:20615723-20615742 Msa0243470:intron 35.0%
ATACACAAAATGGAGATGTC+GGG - chr2_2:20615925-20615944 None:intergenic 35.0%
CATACACAAAATGGAGATGT+CGG - chr2_2:20615926-20615945 None:intergenic 35.0%
ATCAGCAGTGACAATAGAAT+GGG + chr2_2:20616393-20616412 Msa0243470:CDS 35.0%
GAATAATGTGGCAAAAGTAG+TGG - chr2_2:20616580-20616599 None:intergenic 35.0%
TTTGCCACATTATTCTTCAG+AGG + chr2_2:20616585-20616604 Msa0243470:CDS 35.0%
! CAATCCTCTGAAGAATAATG+TGG - chr2_2:20616592-20616611 None:intergenic 35.0%
TGGAACATTGAATTCTCCAA+TGG - chr2_2:20616617-20616636 None:intergenic 35.0%
TTCATAGAGATCCAAAACGT+TGG + chr2_2:20616671-20616690 Msa0243470:CDS 35.0%
TCATAGAGATCCAAAACGTT+GGG + chr2_2:20616672-20616691 Msa0243470:CDS 35.0%
!!! CCTTCTTTTTCAAATCTCTC+GGG - chr2_2:20616718-20616737 None:intergenic 35.0%
!!! CCCTTCTTTTTCAAATCTCT+CGG - chr2_2:20616719-20616738 None:intergenic 35.0%
CCGAGAGATTTGAAAAAGAA+GGG + chr2_2:20616716-20616735 Msa0243470:CDS 35.0%
CGAGAGATTTGAAAAAGAAG+GGG + chr2_2:20616717-20616736 Msa0243470:CDS 35.0%
TGAACAAAGTGATGGCATTT+GGG + chr2_2:20616743-20616762 Msa0243470:CDS 35.0%
!! TTCAAAGCATTGGATCAACA+AGG - chr2_2:20616830-20616849 None:intergenic 35.0%
! TGTTGATCCAATGCTTTGAA+TGG + chr2_2:20616830-20616849 Msa0243470:CDS 35.0%
! GTTGATCCAATGCTTTGAAT+GGG + chr2_2:20616831-20616850 Msa0243470:CDS 35.0%
GGAAAAACTTGATATGATGG+AGG + chr2_2:20616867-20616886 Msa0243470:CDS 35.0%
TAATGGTATCTTCATTGGCA+TGG - chr2_2:20616905-20616924 None:intergenic 35.0%
TGCCAATGAAGATACCATTA+AGG + chr2_2:20616905-20616924 Msa0243470:CDS 35.0%
GCCAATGAAGATACCATTAA+GGG + chr2_2:20616906-20616925 Msa0243470:CDS 35.0%
! TTCGTTACATCATTGGCTAT+AGG - chr2_2:20616949-20616968 None:intergenic 35.0%
!!! GATGATGTGATGCCTTTTTT+TGG + chr2_2:20617134-20617153 Msa0243470:three_prime_UTR 35.0%
CACTGCATGTAACCAAAAAA+AGG - chr2_2:20617149-20617168 None:intergenic 35.0%
! AGCATTCATGGACTAAAGAC+GGG - chr2_2:20612055-20612074 None:intergenic 40.0%
! TATTTTCCGGTTAGAAACCG+TGG - chr2_2:20612110-20612129 None:intergenic 40.0%
TACGACGTAAATTACGCCAA+TGG - chr2_2:20612178-20612197 None:intergenic 40.0%
CTAAGAAGGAGTTAAGACGA+TGG - chr2_2:20612226-20612245 None:intergenic 40.0%
CATCGTCTTAACTCCTTCTT+AGG + chr2_2:20612224-20612243 Msa0243470:CDS 40.0%
AGGTTTCGGTTTCACTAAAG+TGG + chr2_2:20612307-20612326 Msa0243470:CDS 40.0%
! GGCCTTTTACCAAACAAAGT+AGG - chr2_2:20612520-20612539 None:intergenic 40.0%
TAGAGACTGAGTTTGAGAGA+GGG - chr2_2:20612713-20612732 None:intergenic 40.0%
ATAGAGACTGAGTTTGAGAG+AGG - chr2_2:20612714-20612733 None:intergenic 40.0%
GCAACAAGATCAACAACAAC+TGG + chr2_2:20613594-20613613 Msa0243470:intron 40.0%
TGATGATATGTTACACCGAG+CGG + chr2_2:20613627-20613646 Msa0243470:intron 40.0%
!! ATTTTTGGAGGGACTCATTG+AGG + chr2_2:20614001-20614020 Msa0243470:CDS 40.0%
GGAAATATTCGTAGTGATGG+AGG + chr2_2:20614035-20614054 Msa0243470:CDS 40.0%
! ACCGAACAAATGGGTTTAAC+TGG + chr2_2:20614846-20614865 Msa0243470:intron 40.0%
TTCGATCAAGGCTAAGATGT+AGG - chr2_2:20614954-20614973 None:intergenic 40.0%
TGTTTGTGTGTAATCGTGGT+TGG - chr2_2:20615368-20615387 None:intergenic 40.0%
TTTGTTTGTGTACTCGTGGT+TGG - chr2_2:20615711-20615730 None:intergenic 40.0%
! CAGATTTGTTTGTGTACTCG+TGG - chr2_2:20615715-20615734 None:intergenic 40.0%
TCTATAAGTCTTAGCTCAGC+TGG + chr2_2:20615851-20615870 Msa0243470:intron 40.0%
CATCAGCAGTGACAATAGAA+TGG + chr2_2:20616392-20616411 Msa0243470:CDS 40.0%
!! AAAGCATCATCCCAACGTTT+TGG - chr2_2:20616685-20616704 None:intergenic 40.0%
CCCGAGAGATTTGAAAAAGA+AGG + chr2_2:20616715-20616734 Msa0243470:CDS 40.0%
GAGATTTGAAAAAGAAGGGG+AGG + chr2_2:20616720-20616739 Msa0243470:CDS 40.0%
GTGAACAAAGTGATGGCATT+TGG + chr2_2:20616742-20616761 Msa0243470:CDS 40.0%
! AAAGTGATGGCATTTGGGTT+AGG + chr2_2:20616748-20616767 Msa0243470:CDS 40.0%
CTCTTTCCCATTCAAAGCAT+TGG - chr2_2:20616840-20616859 None:intergenic 40.0%
! CTTGATATGATGGAGGGTAA+AGG + chr2_2:20616874-20616893 Msa0243470:CDS 40.0%
GCCCTTAATGGTATCTTCAT+TGG - chr2_2:20616910-20616929 None:intergenic 40.0%
GCTTTACACATAGCCCTTAA+TGG - chr2_2:20616922-20616941 None:intergenic 40.0%
CTCACACTTCGTTACATCAT+TGG - chr2_2:20616956-20616975 None:intergenic 40.0%
AGGCTAAAAAACCTTCCACC+AGG + chr2_2:20611891-20611910 Msa0243470:CDS 45.0%
! ATAGGAATTGTTGGTGGACC+TGG - chr2_2:20611912-20611931 None:intergenic 45.0%
TGGTGGAGGTTGCCAATTAT+AGG - chr2_2:20611930-20611949 None:intergenic 45.0%
GTGATAGGGTTGTGAAGGTA+CGG - chr2_2:20611971-20611990 None:intergenic 45.0%
GGGAAGAAACAACGACAACT+AGG - chr2_2:20612034-20612053 None:intergenic 45.0%
! GCATTCATGGACTAAAGACG+GGG - chr2_2:20612054-20612073 None:intergenic 45.0%
!! TCATTTTAGCGAACCGACCA+CGG + chr2_2:20612090-20612109 Msa0243470:intron 45.0%
GTCTCTTCGAACTCCTAAGA+AGG - chr2_2:20612240-20612259 None:intergenic 45.0%
ACAAAGTAGGAGTAGAGCCT+GGG - chr2_2:20612507-20612526 None:intergenic 45.0%
AACAAAGTAGGAGTAGAGCC+TGG - chr2_2:20612508-20612527 None:intergenic 45.0%
GGCTCTACTCCTACTTTGTT+TGG + chr2_2:20612508-20612527 Msa0243470:intron 45.0%
! GCGGGACACTAATTTTCTGA+AGG - chr2_2:20612620-20612639 None:intergenic 45.0%
ATGCTAGTTGAGAGATGGAG+TGG - chr2_2:20612666-20612685 None:intergenic 45.0%
CTGCTATGCTAGTTGAGAGA+TGG - chr2_2:20612671-20612690 None:intergenic 45.0%
ACAAACTTGATGGAGGAGAG+TGG - chr2_2:20612772-20612791 None:intergenic 45.0%
GATGATATGTTACACCGAGC+GGG + chr2_2:20613628-20613647 Msa0243470:intron 45.0%
TGACTTGAATATCTCCCGCT+CGG - chr2_2:20613645-20613664 None:intergenic 45.0%
TCGCGGTAAAAATTTAGCCC+AGG + chr2_2:20613831-20613850 Msa0243470:intron 45.0%
GACATAATCTCACTCAGTGG+CGG - chr2_2:20613876-20613895 None:intergenic 45.0%
GATAATGAGAGCCATCAGAG+AGG + chr2_2:20614292-20614311 Msa0243470:intron 45.0%
CAATAAGTGGACCTCTCTGA+TGG - chr2_2:20614306-20614325 None:intergenic 45.0%
!!! GTTTTTTTTGGTGCTACGCC+TGG - chr2_2:20614987-20615006 None:intergenic 45.0%
CAAACTCCGATCATGACATC+CGG - chr2_2:20615899-20615918 None:intergenic 45.0%
TTGTAGGGTATGCTTCTTGC+TGG + chr2_2:20616361-20616380 Msa0243470:intron 45.0%
TCTTCAGAGGATTGCACCAT+TGG + chr2_2:20616598-20616617 Msa0243470:CDS 45.0%
! TGGCATTTGGGTTAGGAAGA+AGG + chr2_2:20616755-20616774 Msa0243470:CDS 45.0%
! GGCATTTGGGTTAGGAAGAA+GGG + chr2_2:20616756-20616775 Msa0243470:CDS 45.0%
TGAATGGGAAAGAGAGAGTG+AGG + chr2_2:20616846-20616865 Msa0243470:CDS 45.0%
!!! GATTTTTATTTTATTTTTAA+AGG - chr2_2:20615248-20615267 None:intergenic 5.0%
!!! ATTTATTCTTTTATTAAAAA+TGG - chr2_2:20617072-20617091 None:intergenic 5.0%
! TTGTGAAGGTACGGTGGAGA+GGG - chr2_2:20611962-20611981 None:intergenic 50.0%
! ATAGGGTTGTGAAGGTACGG+TGG - chr2_2:20611968-20611987 None:intergenic 50.0%
AACCGACCACGGTTTCTAAC+CGG + chr2_2:20612101-20612120 Msa0243470:intron 50.0%
TTCCGGTTAGAAACCGTGGT+CGG - chr2_2:20612106-20612125 None:intergenic 50.0%
CTCAAAGACGTCGTCTCTGA+AGG + chr2_2:20612287-20612306 Msa0243470:CDS 50.0%
! GACGTCGTCTCTGAAGGTTT+CGG + chr2_2:20612293-20612312 Msa0243470:CDS 50.0%
TGAACAGAGAAGAGTCAGCG+CGG - chr2_2:20612639-20612658 None:intergenic 50.0%
TGGGTAGGGTGAATCAACCA+AGG + chr2_2:20612848-20612867 Msa0243470:intron 50.0%
TCAACGGAAGTTGTCGACAC+CGG - chr2_2:20613533-20613552 None:intergenic 50.0%
CTCATTGAGGAACATCGCAG+AGG + chr2_2:20614014-20614033 Msa0243470:CDS 50.0%
GTTAGGCCGGATGTCATGAT+CGG + chr2_2:20615890-20615909 Msa0243470:intron 50.0%
TGTGGCAAAAGTAGTGGTGC+TGG - chr2_2:20616574-20616593 None:intergenic 50.0%
AGGGGAGGTGAACAAAGTGA+TGG + chr2_2:20616735-20616754 Msa0243470:CDS 50.0%
TTAGGAAGAAGGGCTTGTCC+TGG + chr2_2:20616766-20616785 Msa0243470:CDS 50.0%
GGCTTGTCCTGGATTAAGCT+TGG + chr2_2:20616777-20616796 Msa0243470:CDS 50.0%
AGTGAAGCCCACAGTACGTT+GGG - chr2_2:20616803-20616822 None:intergenic 50.0%
! TTGTTGGTGGACCTGGTGGA+AGG - chr2_2:20611905-20611924 None:intergenic 55.0%
! GGAATTGTTGGTGGACCTGG+TGG - chr2_2:20611909-20611928 None:intergenic 55.0%
!! TACGGTGGAGAGGGTGCTTT+AGG - chr2_2:20611953-20611972 None:intergenic 55.0%
! GTTGTGAAGGTACGGTGGAG+AGG - chr2_2:20611963-20611982 None:intergenic 55.0%
CCAATGGTCCCCATAAGCAG+CGG - chr2_2:20612162-20612181 None:intergenic 55.0%
!! GCAGGAATGGGCTGTTGAGT+TGG - chr2_2:20612541-20612560 None:intergenic 55.0%
GAACAGAGAAGAGTCAGCGC+GGG - chr2_2:20612638-20612657 None:intergenic 55.0%
TTTGAGAGAGGGAGAGCTGG+AGG - chr2_2:20612702-20612721 None:intergenic 55.0%
GAGTTTGAGAGAGGGAGAGC+TGG - chr2_2:20612705-20612724 None:intergenic 55.0%
AGACTGGAGAGGAGAGGAGA+AGG - chr2_2:20612749-20612768 None:intergenic 55.0%
TGATGGAGGAGAGTGGAGAC+TGG - chr2_2:20612765-20612784 None:intergenic 55.0%
! CCAGGAATTTTCGCGAGCCT+GGG - chr2_2:20613851-20613870 None:intergenic 55.0%
! GGCAAAAGTAGTGGTGCTGG+TGG - chr2_2:20616571-20616590 None:intergenic 55.0%
CGTTGGGCCAAGCTTAATCC+AGG - chr2_2:20616787-20616806 None:intergenic 55.0%
AAGCTTGGCCCAACGTACTG+TGG + chr2_2:20616792-20616811 Msa0243470:CDS 55.0%
AGCTTGGCCCAACGTACTGT+GGG + chr2_2:20616793-20616812 Msa0243470:CDS 55.0%
CAGTGAAGCCCACAGTACGT+TGG - chr2_2:20616804-20616823 None:intergenic 55.0%
ACGTACTGTGGGCTTCACTG+TGG + chr2_2:20616804-20616823 Msa0243470:CDS 55.0%
!! GAGGGTGCTTTAGGTGGTGG+AGG - chr2_2:20611944-20611963 None:intergenic 60.0%
!! GGAGAGGGTGCTTTAGGTGG+TGG - chr2_2:20611947-20611966 None:intergenic 60.0%
!! GGTGGAGAGGGTGCTTTAGG+TGG - chr2_2:20611950-20611969 None:intergenic 60.0%
ACCCTAGGCTCCGCTGCTTA+TGG + chr2_2:20612149-20612168 Msa0243470:intron 60.0%
CCCATAAGCAGCGGAGCCTA+GGG - chr2_2:20612153-20612172 None:intergenic 60.0%
CCCTAGGCTCCGCTGCTTAT+GGG + chr2_2:20612150-20612169 Msa0243470:intron 60.0%
CCTAGGCTCCGCTGCTTATG+GGG + chr2_2:20612151-20612170 Msa0243470:intron 60.0%
CCGCTGCTTATGGGGACCAT+TGG + chr2_2:20612159-20612178 Msa0243470:CDS 60.0%
GAGTGGAGACTGGAGAGGAG+AGG - chr2_2:20612755-20612774 None:intergenic 60.0%
GAGGAGAGTGGAGACTGGAG+AGG - chr2_2:20612760-20612779 None:intergenic 60.0%
CCCAGGCTCGCGAAAATTCC+TGG + chr2_2:20613848-20613867 Msa0243470:intron 60.0%
! GCCAGGAATTTTCGCGAGCC+TGG - chr2_2:20613852-20613871 None:intergenic 60.0%
CCCCATAAGCAGCGGAGCCT+AGG - chr2_2:20612154-20612173 None:intergenic 65.0%
ACTAGCCCAGCCTAGCTGGG+GGG - chr2_2:20612483-20612502 None:intergenic 65.0%
CACTAGCCCAGCCTAGCTGG+GGG - chr2_2:20612484-20612503 None:intergenic 65.0%
GCACTAGCCCAGCCTAGCTG+GGG - chr2_2:20612485-20612504 None:intergenic 65.0%
GGCACTAGCCCAGCCTAGCT+GGG - chr2_2:20612486-20612505 None:intergenic 65.0%
! TCTCACTCAGTGGCGGAGCC+AGG - chr2_2:20613869-20613888 None:intergenic 65.0%
CAGCACCCCCCAGCTAGGCT+GGG + chr2_2:20612475-20612494 Msa0243470:intron 70.0%
GGGCACTAGCCCAGCCTAGC+TGG - chr2_2:20612487-20612506 None:intergenic 70.0%
!! GCTAGGCTGGGCTAGTGCCC+AGG + chr2_2:20612487-20612506 Msa0243470:intron 70.0%
! CCAGCCTAGCTGGGGGGTGC+TGG - chr2_2:20612477-20612496 None:intergenic 75.0%
CCAGCACCCCCCAGCTAGGC+TGG + chr2_2:20612474-20612493 Msa0243470:intron 75.0%
! GGCGCCAGCACCCCCCAGCT+AGG + chr2_2:20612470-20612489 Msa0243470:intron 80.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 20611810 20617194 20611810 ID=Msa0243470;Name=Msa0243470
chr2_2 mRNA 20611810 20617194 20611810 ID=Msa0243470-mRNA-1;Parent=Msa0243470;Name=Msa0243470-mRNA-1;_AED=0.27;_eAED=0.27;_QI=0|0.33|0.25|1|0.33|0.25|4|213|411
chr2_2 exon 20611810 20612023 20611810 ID=Msa0243470-mRNA-1:exon:8254;Parent=Msa0243470-mRNA-1
chr2_2 exon 20612156 20612393 20612156 ID=Msa0243470-mRNA-1:exon:8255;Parent=Msa0243470-mRNA-1
chr2_2 exon 20613971 20614139 20613971 ID=Msa0243470-mRNA-1:exon:8256;Parent=Msa0243470-mRNA-1
chr2_2 exon 20616367 20617194 20616367 ID=Msa0243470-mRNA-1:exon:8257;Parent=Msa0243470-mRNA-1
chr2_2 CDS 20611810 20612023 20611810 ID=Msa0243470-mRNA-1:cds;Parent=Msa0243470-mRNA-1
chr2_2 CDS 20612156 20612393 20612156 ID=Msa0243470-mRNA-1:cds;Parent=Msa0243470-mRNA-1
chr2_2 CDS 20613971 20614139 20613971 ID=Msa0243470-mRNA-1:cds;Parent=Msa0243470-mRNA-1
chr2_2 CDS 20616367 20616981 20616367 ID=Msa0243470-mRNA-1:cds;Parent=Msa0243470-mRNA-1
chr2_2 three_prime_UTR 20616982 20617194 20616982 ID=Msa0243470-mRNA-1:three_prime_utr;Parent=Msa0243470-mRNA-1
Gene Sequence

>Msa0243470

ATGTCACCCTTATTCTACTACTCTCTCCTTTCTCTATCCTTCATCATAACCATAAAAATTTTACTCAAAATCCAATCAAGAAGGCTAAAAAACCTTCCACCAGGTCCACCAACAATTCCTATAATTGGCAACCTCCACCACCTAAAGCACCCTCTCCACCGTACCTTCACAACCCTATCACAAAAATATGGTGATATCTTTTCACTTTGGTTCGGCTCCGCTGCTTATGGGGACCATTGGCGTAATTTACGTCGTATAACAACCATTGATGTTCTTTCAAACCATCGTCTTAACTCCTTCTTAGGAGTTCGAAGAGACGAAACAAATAGACTTATACAAAAGCTTCTCAAAGACGTCGTCTCTGAAGGTTTCGGTTTCACTAAAGTGGAACTGAGATCGAGACTAACAGAGATGACGTTTAATGCTATGATGAGAATGATATCGGGAAAAAGGTGCAAGAAGATTGCAAAAAGATCTGATGCATTTTTGGAGGGACTCATTGAGGAACATCGCAGAGGAAATATTCGTAGTGATGGAGGTACAATGATTGATCATCTTTTGAAGCTTGGTGAATCACAACCTGAGTATTATTCAGATCATTTAATCAAAGGTCTAATTCAGGGTATGCTTCTTGCTGGAACAGACACATCAGCAGTGACAATAGAATGGGTAATGTCTGAATTGTTGAATCACCCAGAAGTATTAAAGAAAGCAAAAGAAGAATTAGACACTCAAATTGGAAAAAATAAATTAGTAGATGAACAAGATTTGTCAAAACTTCCATACCTACAAAACATAATTTCTGAAACACTTAGATTGCATCCACCAGCACCACTACTTTTGCCACATTATTCTTCAGAGGATTGCACCATTGGAGAATTCAATGTTCCAAAAGATACTATAATATTGACCAATGTTTGGAGTATTCATAGAGATCCAAAACGTTGGGATGATGCTTTGAGTTTTAAACCCGAGAGATTTGAAAAAGAAGGGGAGGTGAACAAAGTGATGGCATTTGGGTTAGGAAGAAGGGCTTGTCCTGGATTAAGCTTGGCCCAACGTACTGTGGGCTTCACTGTGGCCTTGTTGATCCAATGCTTTGAATGGGAAAGAGAGAGTGAGGAAAAACTTGATATGATGGAGGGTAAAGGAATTACCATGCCAATGAAGATACCATTAAGGGCTATGTGTAAAGCACTACCTATAGCCAATGATGTAACGAAGTGTGAGAAATGA

Protein sequence

>Msa0243470

MSPLFYYSLLSLSFIITIKILLKIQSRRLKNLPPGPPTIPIIGNLHHLKHPLHRTFTTLSQKYGDIFSLWFGSAAYGDHWRNLRRITTIDVLSNHRLNSFLGVRRDETNRLIQKLLKDVVSEGFGFTKVELRSRLTEMTFNAMMRMISGKRCKKIAKRSDAFLEGLIEEHRRGNIRSDGGTMIDHLLKLGESQPEYYSDHLIKGLIQGMLLAGTDTSAVTIEWVMSELLNHPEVLKKAKEELDTQIGKNKLVDEQDLSKLPYLQNIISETLRLHPPAPLLLPHYSSEDCTIGEFNVPKDTIILTNVWSIHRDPKRWDDALSFKPERFEKEGEVNKVMAFGLGRRACPGLSLAQRTVGFTVALLIQCFEWERESEEKLDMMEGKGITMPMKIPLRAMCKALPIANDVTKCEK*