Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0859370 | XP_024640048.1 | 92.525 | 495 | 12 | 3 | 1 | 470 | 1 | 495 | 0.0 | 909 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0859370 | sp|O48626|ZW10_ARATH | 55.000 | 500 | 182 | 6 | 1 | 470 | 4 | 490 | 1.69e-178 | 521 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0859370 | A0A396HXH4 | 92.525 | 495 | 12 | 3 | 1 | 470 | 1 | 495 | 0.0 | 909 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0548610 | Msa0859370 | 0.820462 | 6.772066e-53 | -8.615850e-47 |
| Msa0562660 | Msa0859370 | 0.801413 | 9.111788e-49 | -8.615850e-47 |
| Msa0859370 | Msa1065430 | 0.804278 | 2.332358e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0859370 | MtrunA17_Chr5g0438671 | 92.525 | 495 | 12 | 3 | 1 | 470 | 1 | 495 | 0.0 | 909 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0859370 | AT2G32900.1 | 55.000 | 500 | 182 | 6 | 1 | 470 | 4 | 490 | 1.72e-179 | 521 |
Find 113 sgRNAs with CRISPR-Local
Find 509 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGAGGTCCTCGTGAAGTTTA+TGG | 0.195404 | 5_4:-57716106 | Msa0859370:CDS |
| ACATTCTTTCATTTATAAAA+TGG | 0.200982 | 5_4:+57711552 | None:intergenic |
| GATGGGGAGCTTCTGTATTC+AGG | 0.225636 | 5_4:-57715295 | Msa0859370:CDS |
| CATCAATTGCTTGGCTGCTT+TGG | 0.242515 | 5_4:+57714380 | None:intergenic |
| TGAAGGTTGCGTTGAGAATT+GGG | 0.268063 | 5_4:-57717764 | Msa0859370:CDS |
| GGGTTGGTGGGAGTGATTGT+AGG | 0.275689 | 5_4:-57717867 | Msa0859370:CDS |
| ATACAAGGGATGGTTCTATT+TGG | 0.289580 | 5_4:-57714479 | Msa0859370:CDS |
| GTGGTTGGTATTCTAGAGTA+TGG | 0.291945 | 5_4:-57715888 | Msa0859370:CDS |
| TTTGCTTCCAGAACAGTTCT+TGG | 0.298919 | 5_4:-57715237 | Msa0859370:CDS |
| AGTTCTTGGATCCGATGTTT+TGG | 0.310346 | 5_4:-57715223 | Msa0859370:CDS |
| AGTTCCATCACCAGATATTA+AGG | 0.320745 | 5_4:-57715751 | Msa0859370:intron |
| TTGAAGGTTGCGTTGAGAAT+TGG | 0.325300 | 5_4:-57717765 | Msa0859370:CDS |
| GGGCGGAGAGAGGGGAGTTT+TGG | 0.325758 | 5_4:+57718662 | None:intergenic |
| ATTACATTCACCTTAATATC+TGG | 0.328243 | 5_4:+57715741 | None:intergenic |
| GATTCAGTTGCAAATGGTTT+TGG | 0.331904 | 5_4:-57716025 | Msa0859370:CDS |
| TCGATGAGAAGGCGGAGATC+GGG | 0.351384 | 5_4:+57718640 | None:intergenic |
| GGAAGTTGTGGAGGAGATGA+AGG | 0.360747 | 5_4:-57717928 | Msa0859370:CDS |
| GTGAAGAAAGAGTTGAAAAG+TGG | 0.366206 | 5_4:-57717822 | Msa0859370:CDS |
| GGGGAAGAGTGAGGAGTTGA+AGG | 0.369607 | 5_4:-57717907 | Msa0859370:CDS |
| CAAAGCAGCCAAGCAATTGA+TGG | 0.388545 | 5_4:-57714379 | Msa0859370:CDS |
| ATGGGGAGCTTCTGTATTCA+GGG | 0.400110 | 5_4:-57715294 | Msa0859370:CDS |
| AAGAGAGTTGTTAGGGTTGG+TGG | 0.401297 | 5_4:-57717880 | Msa0859370:CDS |
| AGGTGAAAAGAGAGTTGTTA+GGG | 0.418650 | 5_4:-57717887 | Msa0859370:CDS |
| AAGGTGAAAAGAGAGTTGTT+AGG | 0.424793 | 5_4:-57717888 | Msa0859370:CDS |
| AATTAGTTCCATCAATTGCT+TGG | 0.425163 | 5_4:+57714371 | None:intergenic |
| TTGCATGGACTAACCTTGAC+AGG | 0.430814 | 5_4:+57712023 | None:intergenic |
| GGTTGGTGGGAGTGATTGTA+GGG | 0.435538 | 5_4:-57717866 | Msa0859370:CDS |
| GTCGATGAGAAGGCGGAGAT+CGG | 0.437998 | 5_4:+57718639 | None:intergenic |
| ATCGGATCCAAGAACTGTTC+TGG | 0.440121 | 5_4:+57715230 | None:intergenic |
| AATATCAAGCTTTCTTTCAA+AGG | 0.441596 | 5_4:-57715167 | Msa0859370:intron |
| GTTGAAAAGTGGGAAGTTGA+AGG | 0.443910 | 5_4:-57717811 | Msa0859370:CDS |
| ATTGGACTTGGGATCGGATC+TGG | 0.451508 | 5_4:+57718596 | None:intergenic |
| GGGATCGGATCTGGTGAGAA+TGG | 0.454958 | 5_4:+57718605 | None:intergenic |
| GAGGTCATCGGAGACTTTAA+CGG | 0.460969 | 5_4:+57718504 | None:intergenic |
| GAATGGAAAAGTCACATTGC+AGG | 0.463538 | 5_4:+57714591 | None:intergenic |
| TTTCTTATCAGAGAGGTGTT+TGG | 0.465676 | 5_4:-57714406 | Msa0859370:CDS |
| ATCAGAGCGACCGGCGGATG+TGG | 0.467279 | 5_4:-57717958 | Msa0859370:CDS |
| GACTTTAACGGTCTGTGAAA+CGG | 0.468979 | 5_4:+57718516 | None:intergenic |
| GAGTGGGATTCAGTTGCAAA+TGG | 0.470807 | 5_4:-57716031 | Msa0859370:CDS |
| AGGCGAGGTAGGATTGGACT+TGG | 0.471263 | 5_4:+57718584 | None:intergenic |
| AGAGAGTTGTTAGGGTTGGT+GGG | 0.476208 | 5_4:-57717879 | Msa0859370:CDS |
| GGTGAGAGGCGAGGTAGGAT+TGG | 0.477312 | 5_4:+57718578 | None:intergenic |
| GTGAAACGGCGTCGTTGCAG+AGG | 0.480159 | 5_4:+57718530 | None:intergenic |
| GGTTGCTGCGGAAGGGTTGA+AGG | 0.480378 | 5_4:-57717790 | Msa0859370:CDS |
| TTGCAGCTTGAGCATTTGGA+TGG | 0.487088 | 5_4:-57715313 | Msa0859370:intron |
| GTGAAAACTCACTTGGGGAA+TGG | 0.487942 | 5_4:+57714574 | None:intergenic |
| CTACCACATGGCTGGATGAC+AGG | 0.488421 | 5_4:+57714436 | None:intergenic |
| ATTATTAGCTCTGATATCCT+AGG | 0.488599 | 5_4:+57715187 | None:intergenic |
| GCAGCTTGAGCATTTGGATG+GGG | 0.493265 | 5_4:-57715311 | Msa0859370:intron |
| GTCATCTACAAGAGTTGCTA+TGG | 0.495159 | 5_4:-57712096 | Msa0859370:CDS |
| AATCAAATCTACCACATGGC+TGG | 0.496474 | 5_4:+57714428 | None:intergenic |
| GAAGTTGTGGAGGAGATGAA+GGG | 0.496632 | 5_4:-57717927 | Msa0859370:CDS |
| TGTAGGGTTGAATGAGAGGT+TGG | 0.497020 | 5_4:-57717850 | Msa0859370:CDS |
| TGAAGAAAGAGTTGAAAAGT+GGG | 0.497359 | 5_4:-57717821 | Msa0859370:CDS |
| TGGTTGGTATTCTAGAGTAT+GGG | 0.500904 | 5_4:-57715887 | Msa0859370:CDS |
| TTGGACGTTTGACATGGCCT+AGG | 0.504113 | 5_4:-57715204 | Msa0859370:CDS |
| GGATCGGATCTGGTGAGAAT+GGG | 0.517907 | 5_4:+57718606 | None:intergenic |
| TGTGGAGGTGAGGGAAGTTG+TGG | 0.519227 | 5_4:-57717940 | Msa0859370:CDS |
| AAGTTGAAGGTTGCTGCGGA+AGG | 0.521428 | 5_4:-57717798 | Msa0859370:CDS |
| GACCGGCGGATGTGGAGGTG+AGG | 0.522535 | 5_4:-57717950 | Msa0859370:CDS |
| GGAGATGAAGGGGAAGAGTG+AGG | 0.522560 | 5_4:-57717916 | Msa0859370:CDS |
| CTGCAGGAGTATACAAGGGA+TGG | 0.523760 | 5_4:-57714489 | Msa0859370:intron |
| TAGAAGTTCATAATTTGAGT+GGG | 0.530448 | 5_4:-57716047 | Msa0859370:CDS |
| GGAAGGGTTGAAGGAGTTGA+AGG | 0.530518 | 5_4:-57717781 | Msa0859370:CDS |
| CTGTTATCCTTGTCATCTGA+TGG | 0.531605 | 5_4:+57714698 | None:intergenic |
| GAAAAGAGAGTTGTTAGGGT+TGG | 0.531605 | 5_4:-57717883 | Msa0859370:CDS |
| GAAGGTTGCGTTGAGAATTG+GGG | 0.534470 | 5_4:-57717763 | Msa0859370:CDS |
| AAGTTGTGGAGGAGATGAAG+GGG | 0.535784 | 5_4:-57717926 | Msa0859370:CDS |
| TGCAGCTTGAGCATTTGGAT+GGG | 0.537885 | 5_4:-57715312 | Msa0859370:intron |
| TAGCAACTCTTGTAGATGAC+AGG | 0.541427 | 5_4:+57712099 | None:intergenic |
| ATCACTCCTTTCATTAATCG+TGG | 0.544846 | 5_4:-57715828 | Msa0859370:CDS |
| AGTCGACGCGGTCGATGAGA+AGG | 0.545118 | 5_4:+57718629 | None:intergenic |
| GATTCCTCGAGAAACGAAAG+AGG | 0.551896 | 5_4:+57715801 | None:intergenic |
| CGATGAGAAGGCGGAGATCG+GGG | 0.552325 | 5_4:+57718641 | None:intergenic |
| GATGAGAAGGCGGAGATCGG+GGG | 0.559128 | 5_4:+57718642 | None:intergenic |
| GGAAGATGATCGAGAGCCGT+TGG | 0.565798 | 5_4:-57717739 | Msa0859370:intron |
| CATTTCGCCATCAGATGACA+AGG | 0.567463 | 5_4:-57714705 | Msa0859370:CDS |
| GGTAGGATTGGACTTGGGAT+CGG | 0.567590 | 5_4:+57718590 | None:intergenic |
| TTATCAGGTATCAGAGCGAC+CGG | 0.577055 | 5_4:-57717967 | Msa0859370:intron |
| ACCGGCGGATGTGGAGGTGA+GGG | 0.577208 | 5_4:-57717949 | Msa0859370:CDS |
| ACAACCTCTTTCGTTTCTCG+AGG | 0.581273 | 5_4:-57715805 | Msa0859370:CDS |
| GGAGGTGAGGGAAGTTGTGG+AGG | 0.583596 | 5_4:-57717937 | Msa0859370:CDS |
| ATAGAAGTTCATAATTTGAG+TGG | 0.583908 | 5_4:-57716048 | Msa0859370:CDS |
| GGTTCTATTTGGAAGAATGA+CGG | 0.585999 | 5_4:-57714468 | Msa0859370:CDS |
| ACTAATTCATCAAACACTGC+AGG | 0.586167 | 5_4:-57714355 | Msa0859370:intron |
| TGAAACGGCGTCGTTGCAGA+GGG | 0.586873 | 5_4:+57718531 | None:intergenic |
| TGATTGTAGGGTTGAATGAG+AGG | 0.587281 | 5_4:-57717854 | Msa0859370:CDS |
| AGAGCGACCGGCGGATGTGG+AGG | 0.591564 | 5_4:-57717955 | Msa0859370:CDS |
| TCCCTCACCTCCACATCCGC+CGG | 0.592378 | 5_4:+57717948 | None:intergenic |
| AGTTGAAGGTTGCTGCGGAA+GGG | 0.594847 | 5_4:-57717797 | Msa0859370:CDS |
| GGTTGTCCACGATTAATGAA+AGG | 0.600696 | 5_4:+57715822 | None:intergenic |
| TTTGGGTTTGTAGATTCAAG+AGG | 0.602667 | 5_4:-57716124 | Msa0859370:intron |
| CGCGAAATCATCATGGTGAG+AGG | 0.603835 | 5_4:+57718564 | None:intergenic |
| AGAGATTCGCGAAATCATCA+TGG | 0.604239 | 5_4:+57718557 | None:intergenic |
| TGTGTTGAAGAGAGATTCCA+TGG | 0.604731 | 5_4:+57718726 | None:intergenic |
| TAGGACGGTGTCGAGGTCAT+CGG | 0.608590 | 5_4:+57718492 | None:intergenic |
| TGAAGTAGTAGTCCCTGTCA+AGG | 0.609913 | 5_4:-57712036 | Msa0859370:intron |
| TTCACCTTAATATCTGGTGA+TGG | 0.618184 | 5_4:+57715747 | None:intergenic |
| GGTTGCGTTGAGAATTGGGG+AGG | 0.624026 | 5_4:-57717760 | Msa0859370:CDS |
| ATGTCAAACGTCCAAAACAT+CGG | 0.628718 | 5_4:+57715212 | None:intergenic |
| GGCGAGGTAGGATTGGACTT+GGG | 0.637509 | 5_4:+57718585 | None:intergenic |
| CGACGCGGTCGATGAGAAGG+CGG | 0.639225 | 5_4:+57718632 | None:intergenic |
| TTGGTCGGAGAGATCTTGTG+CGG | 0.641921 | 5_4:+57718681 | None:intergenic |
| ATCATGGTGAGAGGCGAGGT+AGG | 0.645051 | 5_4:+57718573 | None:intergenic |
| AATCATCATGGTGAGAGGCG+AGG | 0.662366 | 5_4:+57718569 | None:intergenic |
| TCAGGTATCAGAGCGACCGG+CGG | 0.662943 | 5_4:-57717964 | Msa0859370:intron |
| TGGGAAGTTGAAGGTTGCTG+CGG | 0.663536 | 5_4:-57717802 | Msa0859370:CDS |
| TATCCTGTCATCCAGCCATG+TGG | 0.664379 | 5_4:-57714439 | Msa0859370:CDS |
| AAAAGCTGTGCGATTTGATG+GGG | 0.672870 | 5_4:-57716082 | Msa0859370:CDS |
| TGCATGGACTAACCTTGACA+GGG | 0.681287 | 5_4:+57712024 | None:intergenic |
| CCAGCCTTAGGACGGTGTCG+AGG | 0.686134 | 5_4:+57718485 | None:intergenic |
| AGAAAATCAAATCTACCACA+TGG | 0.698503 | 5_4:+57714424 | None:intergenic |
| GGTGAGAATGGGAGTCGACG+CGG | 0.701446 | 5_4:+57718617 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GACTATATATATTATTTAAT+GGG | - | chr5_4:57716974-57716993 | Msa0859370:intron | 10.0% |
| !! | TCATATCATAAATTAAATAA+GGG | + | chr5_4:57717167-57717186 | None:intergenic | 10.0% |
| !! | AATTATTTATTTAATACTCT+TGG | - | chr5_4:57717213-57717232 | Msa0859370:intron | 10.0% |
| !! | ATTGAATAAAATTATGTGAT+TGG | - | chr5_4:57712899-57712918 | Msa0859370:intron | 15.0% |
| !! | TTGAATAAAATTATGTGATT+GGG | - | chr5_4:57712900-57712919 | Msa0859370:intron | 15.0% |
| !!! | TCTATTTTTTCAAATAAAAC+AGG | + | chr5_4:57713328-57713347 | None:intergenic | 15.0% |
| !! | TTCTATTCTTAGATTTATTA+GGG | + | chr5_4:57713449-57713468 | None:intergenic | 15.0% |
| !! | ATTCTATTCTTAGATTTATT+AGG | + | chr5_4:57713450-57713469 | None:intergenic | 15.0% |
| !! | ACTACTTATTAAAATACTTA+AGG | + | chr5_4:57713725-57713744 | None:intergenic | 15.0% |
| !! | AAAATGAAAATCAGATATTT+AGG | + | chr5_4:57714957-57714976 | None:intergenic | 15.0% |
| !!! | TCAGTTAAATATTTAAAGTA+AGG | + | chr5_4:57716038-57716057 | None:intergenic | 15.0% |
| !! | TATTTAACTGAAAAATTCAA+AGG | - | chr5_4:57716047-57716066 | Msa0859370:CDS | 15.0% |
| !! | TAAATAATATATATAGTCGA+TGG | + | chr5_4:57716972-57716991 | None:intergenic | 15.0% |
| !! | CGACTATATATATTATTTAA+TGG | - | chr5_4:57716973-57716992 | Msa0859370:intron | 15.0% |
| !! | GTCATATCATAAATTAAATA+AGG | + | chr5_4:57717168-57717187 | None:intergenic | 15.0% |
| !!! | GATTTTCAAACAAAAAAATA+TGG | - | chr5_4:57717502-57717521 | Msa0859370:intron | 15.0% |
| !! | TAGTTAATAATATAGTAGAA+AGG | - | chr5_4:57717537-57717556 | Msa0859370:intron | 15.0% |
| !!! | TACATTCACATAAATATTTT+CGG | - | chr5_4:57717787-57717806 | Msa0859370:CDS | 15.0% |
| !!! | AAATGATATATTGATTGATT+TGG | - | chr5_4:57717895-57717914 | Msa0859370:CDS | 15.0% |
| !! | GATTAAAGAAATACTAAAAA+GGG | + | chr5_4:57718311-57718330 | None:intergenic | 15.0% |
| !! | AGATTAAAGAAATACTAAAA+AGG | + | chr5_4:57718312-57718331 | None:intergenic | 15.0% |
| !!! | TTTTTAGTATTTCTTTAATC+TGG | - | chr5_4:57718311-57718330 | Msa0859370:intron | 15.0% |
| !! | NNNNNNTAGTATATTCACTA+TGG | - | chr5_4:57718562-57718581 | Msa0859370:CDS | 15.0% |
| !!! | TTTGAATTTTTTTTAGTGAT+TGG | + | chr5_4:57718663-57718682 | None:intergenic | 15.0% |
| !!! | TTAAAAAAGTTTTACACTGT+CGG | - | chr5_4:57712021-57712040 | Msa0859370:intron | 20.0% |
| !! | GAATGTATGTGTAAAATAAT+TGG | + | chr5_4:57712102-57712121 | None:intergenic | 20.0% |
| !!! | GATTTTGAATTTGTTTGAAA+TGG | - | chr5_4:57712955-57712974 | Msa0859370:intron | 20.0% |
| !! | AAAGAAAAGATTAATAGCTT+GGG | - | chr5_4:57713022-57713041 | Msa0859370:intron | 20.0% |
| !!! | ATGCTTTTTAAGAAAATACT+TGG | + | chr5_4:57713239-57713258 | None:intergenic | 20.0% |
| !!! | TGATTTTCACATTTTTGTTT+GGG | + | chr5_4:57713810-57713829 | None:intergenic | 20.0% |
| !!! | ATGATTTTCACATTTTTGTT+TGG | + | chr5_4:57713811-57713830 | None:intergenic | 20.0% |
| !! | TAATGTGTAATTGTAACATA+AGG | - | chr5_4:57713883-57713902 | Msa0859370:intron | 20.0% |
| !!! | TGATGTATTTTCCAAATAAT+TGG | - | chr5_4:57713993-57714012 | Msa0859370:intron | 20.0% |
| !! | TGTTATTGATCTTATTCTTA+GGG | - | chr5_4:57714659-57714678 | Msa0859370:CDS | 20.0% |
| !! | TGATAATAATATCTAAGAAG+AGG | + | chr5_4:57714868-57714887 | None:intergenic | 20.0% |
| !! | TAAAATACTTAGTTTCTTTC+TGG | + | chr5_4:57715429-57715448 | None:intergenic | 20.0% |
| !! | TAAATATTCATTATTCTGGA+TGG | + | chr5_4:57715963-57715982 | None:intergenic | 20.0% |
| !! | GTTGTAAATATTCATTATTC+TGG | + | chr5_4:57715967-57715986 | None:intergenic | 20.0% |
| !! | AAATTGAGAATTTCATCTAT+AGG | + | chr5_4:57716013-57716032 | None:intergenic | 20.0% |
| !! | TATAGATGAAATTCTCAATT+TGG | - | chr5_4:57716012-57716031 | Msa0859370:intron | 20.0% |
| !!! | AGTATTTTTTTTCATCACAT+TGG | + | chr5_4:57716178-57716197 | None:intergenic | 20.0% |
| !! | CAGTATAAATCTCTAATTAA+AGG | + | chr5_4:57716765-57716784 | None:intergenic | 20.0% |
| !!! | TCATTTTCAAATATGAATAC+TGG | - | chr5_4:57716863-57716882 | Msa0859370:intron | 20.0% |
| !!! | TTATTTAATGGGTCTTATTA+AGG | - | chr5_4:57716985-57717004 | Msa0859370:intron | 20.0% |
| !! | TCATAAAAAGTTACCATTTA+AGG | - | chr5_4:57717105-57717124 | Msa0859370:intron | 20.0% |
| !! | TAGAGATACTATCATTAAAT+CGG | + | chr5_4:57717272-57717291 | None:intergenic | 20.0% |
| !! | ACAAATAGTTAAATTAAACG+AGG | + | chr5_4:57717302-57717321 | None:intergenic | 20.0% |
| !! | GAATGAAATATAAGCAAAAT+TGG | + | chr5_4:57717448-57717467 | None:intergenic | 20.0% |
| !!! | ATTTTGCTTATATTTCATTC+TGG | - | chr5_4:57717448-57717467 | Msa0859370:intron | 20.0% |
| !! | AGTTATATTTGTACATATGT+CGG | + | chr5_4:57718077-57718096 | None:intergenic | 20.0% |
| !! | GTGAATTTGATCTTTATAAA+TGG | - | chr5_4:57718141-57718160 | Msa0859370:intron | 20.0% |
| !! | AAATTATAAAATACAGCGAA+AGG | + | chr5_4:57718407-57718426 | None:intergenic | 20.0% |
| !!! | TTTATAATTTTTCTGATCTC+TGG | - | chr5_4:57718417-57718436 | Msa0859370:intron | 20.0% |
| !!! | TTATGTTTTACAAGTATGTT+TGG | - | chr5_4:57718591-57718610 | Msa0859370:CDS | 20.0% |
| !! | AGACAAATTAATATTAAGCT+TGG | + | chr5_4:57718617-57718636 | None:intergenic | 20.0% |
| ! | TCATATTCTTAAACTACTAC+CGG | + | chr5_4:57712670-57712689 | None:intergenic | 25.0% |
| ! | AAAATTATGTGATTGGGATT+TGG | - | chr5_4:57712906-57712925 | Msa0859370:intron | 25.0% |
| !! | TTGAATTTGTTTGAAATGGA+AGG | - | chr5_4:57712959-57712978 | Msa0859370:intron | 25.0% |
| ! | CAAAGAAAAGATTAATAGCT+TGG | - | chr5_4:57713021-57713040 | Msa0859370:intron | 25.0% |
| !!! | CATTTTGTTTCCAAATAACT+CGG | + | chr5_4:57713099-57713118 | None:intergenic | 25.0% |
| !!! | TATTTTCTTAAAAAGCATCG+AGG | - | chr5_4:57713241-57713260 | Msa0859370:intron | 25.0% |
| ! | TATATGATAATCAACTGTGT+AGG | - | chr5_4:57713748-57713767 | Msa0859370:intron | 25.0% |
| ! | TTATCCCTTCATCATTTATA+TGG | + | chr5_4:57714099-57714118 | None:intergenic | 25.0% |
| !! | TGTGATTTTTATTGAGTTTG+TGG | - | chr5_4:57714121-57714140 | Msa0859370:intron | 25.0% |
| !!! | TTTTTAGAGGAATTCGATTT+GGG | - | chr5_4:57714147-57714166 | Msa0859370:intron | 25.0% |
| ! | ATAGAAGTTCATAATTTGAG+TGG | - | chr5_4:57714240-57714259 | Msa0859370:intron | 25.0% |
| ! | TAGAAGTTCATAATTTGAGT+GGG | - | chr5_4:57714241-57714260 | Msa0859370:intron | 25.0% |
| !!! | CTTCTAATTGTTGACTTTTT+AGG | - | chr5_4:57714378-57714397 | Msa0859370:CDS | 25.0% |
| ! | ATTACATTCACCTTAATATC+TGG | + | chr5_4:57714550-57714569 | None:intergenic | 25.0% |
| !! | GTGTTATTGATCTTATTCTT+AGG | - | chr5_4:57714658-57714677 | Msa0859370:CDS | 25.0% |
| ! | TTACAATATCAACCATTGAT+TGG | - | chr5_4:57714785-57714804 | Msa0859370:CDS | 25.0% |
| !! | TACAATATCAACCATTGATT+GGG | - | chr5_4:57714786-57714805 | Msa0859370:CDS | 25.0% |
| ! | TAATATCTAAGAAGAGGATT+TGG | + | chr5_4:57714862-57714881 | None:intergenic | 25.0% |
| ! | AATATCAAGCTTTCTTTCAA+AGG | - | chr5_4:57715121-57715140 | Msa0859370:intron | 25.0% |
| !!! | TCAATGAAACATCATTTTTG+TGG | + | chr5_4:57715243-57715262 | None:intergenic | 25.0% |
| ! | TATAATCTAGGAGAATTACT+TGG | - | chr5_4:57715380-57715399 | Msa0859370:intron | 25.0% |
| !!! | ATGTACATCTGATTTTGAAA+CGG | - | chr5_4:57715541-57715560 | Msa0859370:intron | 25.0% |
| !!! | ATTTGATTTTCTTATCAGAG+AGG | - | chr5_4:57715875-57715894 | Msa0859370:CDS | 25.0% |
| ! | TTTCATCTATAGGAAAAAAC+TGG | + | chr5_4:57716003-57716022 | None:intergenic | 25.0% |
| !! | CTTGTAAAATCGAAATTTTG+AGG | - | chr5_4:57716116-57716135 | Msa0859370:intron | 25.0% |
| ! | CAAAAGTTAGTATAATGAGT+TGG | + | chr5_4:57716309-57716328 | None:intergenic | 25.0% |
| ! | TTTGAAAATGACATCATTAC+AGG | + | chr5_4:57716854-57716873 | None:intergenic | 25.0% |
| !!! | GGACATAGTATTTTAAGATT+AGG | - | chr5_4:57716884-57716903 | Msa0859370:intron | 25.0% |
| !!! | ATTTTAGCCAATGAGATAAT+CGG | + | chr5_4:57717190-57717209 | None:intergenic | 25.0% |
| ! | AATAAATGTGAGATATTGTC+TGG | - | chr5_4:57717601-57717620 | Msa0859370:intron | 25.0% |
| ! | AAGTTACATTGTCTAAGTTT+AGG | - | chr5_4:57717674-57717693 | Msa0859370:intron | 25.0% |
| ! | AGTTACATTGTCTAAGTTTA+GGG | - | chr5_4:57717675-57717694 | Msa0859370:intron | 25.0% |
| ! | TATTAGTGACATAAAAGAAG+GGG | + | chr5_4:57717706-57717725 | None:intergenic | 25.0% |
| ! | CTATTAGTGACATAAAAGAA+GGG | + | chr5_4:57717707-57717726 | None:intergenic | 25.0% |
| ! | ACTATTAGTGACATAAAAGA+AGG | + | chr5_4:57717708-57717727 | None:intergenic | 25.0% |
| ! | AGTTTCTTTCAAATCTAGTA+AGG | + | chr5_4:57717821-57717840 | None:intergenic | 25.0% |
| !!! | AAAGAAACTGAAAAAGTGTT+TGG | - | chr5_4:57717832-57717851 | Msa0859370:CDS | 25.0% |
| !!! | AAGAAACTGAAAAAGTGTTT+GGG | - | chr5_4:57717833-57717852 | Msa0859370:CDS | 25.0% |
| ! | AAATACATGATTGCATATGT+AGG | - | chr5_4:57717920-57717939 | Msa0859370:CDS | 25.0% |
| ! | AATACATGATTGCATATGTA+GGG | - | chr5_4:57717921-57717940 | Msa0859370:CDS | 25.0% |
| ! | TGTACAACTAACCATATAAT+TGG | - | chr5_4:57718043-57718062 | Msa0859370:intron | 25.0% |
| ! | AATGGATAAATAAATTGTGC+AGG | - | chr5_4:57718159-57718178 | Msa0859370:intron | 25.0% |
| !!! | TTTAATCTGGTATTGACTTT+AGG | - | chr5_4:57718324-57718343 | Msa0859370:intron | 25.0% |
| !!! | TTAATCTGGTATTGACTTTA+GGG | - | chr5_4:57718325-57718344 | Msa0859370:intron | 25.0% |
| !!! | TTAATTTGTCTTCTCCTTTT+AGG | - | chr5_4:57718626-57718645 | Msa0859370:CDS | 25.0% |
| TAACATCACTAGATATCTGT+AGG | - | chr5_4:57711839-57711858 | Msa0859370:intron | 30.0% | |
| AACATCACTAGATATCTGTA+GGG | - | chr5_4:57711840-57711859 | Msa0859370:intron | 30.0% | |
| !!! | GATTAGCTTTTATGAACTGA+CGG | - | chr5_4:57711883-57711902 | Msa0859370:intron | 30.0% |
| TAGCAACTAACCTAAAAATG+TGG | - | chr5_4:57711968-57711987 | Msa0859370:intron | 30.0% | |
| TACACATGCATCTAATAATG+TGG | + | chr5_4:57712184-57712203 | None:intergenic | 30.0% | |
| CTGCAACTAAAAACATTATC+AGG | - | chr5_4:57712306-57712325 | Msa0859370:intron | 30.0% | |
| TGAAGAAAGAGTTGAAAAGT+GGG | - | chr5_4:57712467-57712486 | Msa0859370:intron | 30.0% | |
| !!! | GTAATCACATGTTTTGATGT+CGG | - | chr5_4:57712701-57712720 | Msa0859370:intron | 30.0% |
| AGTTTCATTGCAATGTATGT+AGG | - | chr5_4:57712787-57712806 | Msa0859370:intron | 30.0% | |
| GTGATAGATGAAACTGAAAT+TGG | - | chr5_4:57712839-57712858 | Msa0859370:intron | 30.0% | |
| GATGAAACTGAAATTGGTAT+TGG | - | chr5_4:57712845-57712864 | Msa0859370:intron | 30.0% | |
| AAATGGAAGGAATTGCATTT+AGG | - | chr5_4:57712972-57712991 | Msa0859370:intron | 30.0% | |
| AATGGAAGGAATTGCATTTA+GGG | - | chr5_4:57712973-57712992 | Msa0859370:intron | 30.0% | |
| AAAGAAAGAACAGTATCCAT+GGG | + | chr5_4:57713130-57713149 | None:intergenic | 30.0% | |
| TAAAGAAAGAACAGTATCCA+TGG | + | chr5_4:57713131-57713150 | None:intergenic | 30.0% | |
| CTTTCTTTATCATGTGTAGT+TGG | - | chr5_4:57713142-57713161 | Msa0859370:intron | 30.0% | |
| AAAAAGAACAAGAACAAGCA+TGG | - | chr5_4:57713347-57713366 | Msa0859370:intron | 30.0% | |
| AAAAGAACAAGAACAAGCAT+GGG | - | chr5_4:57713348-57713367 | Msa0859370:intron | 30.0% | |
| AATTCAAGGGTTAAACTTAG+CGG | + | chr5_4:57713474-57713493 | None:intergenic | 30.0% | |
| AACATAAGGAAATATGAGTC+TGG | - | chr5_4:57713897-57713916 | Msa0859370:intron | 30.0% | |
| ACATAAGGAAATATGAGTCT+GGG | - | chr5_4:57713898-57713917 | Msa0859370:intron | 30.0% | |
| AGCAATTATGGCCAATTATT+TGG | + | chr5_4:57714007-57714026 | None:intergenic | 30.0% | |
| AATCATCGCTAAAGCAATTA+TGG | + | chr5_4:57714019-57714038 | None:intergenic | 30.0% | |
| GATTGTACTGTTACACATAT+TGG | + | chr5_4:57714059-57714078 | None:intergenic | 30.0% | |
| TTGTGCCATATAAATGATGA+AGG | - | chr5_4:57714091-57714110 | Msa0859370:intron | 30.0% | |
| TGTGCCATATAAATGATGAA+GGG | - | chr5_4:57714092-57714111 | Msa0859370:intron | 30.0% | |
| !! | GTTTTTAGAGGAATTCGATT+TGG | - | chr5_4:57714146-57714165 | Msa0859370:intron | 30.0% |
| !!! | CTAATTGTTGACTTTTTAGG+TGG | - | chr5_4:57714381-57714400 | Msa0859370:CDS | 30.0% |
| TAAGGTGAATGTAATGTGTT+AGG | - | chr5_4:57714555-57714574 | Msa0859370:intron | 30.0% | |
| AAGGTGAATGTAATGTGTTA+GGG | - | chr5_4:57714556-57714575 | Msa0859370:intron | 30.0% | |
| AGAGTAATAAACCCAATCAA+TGG | + | chr5_4:57714800-57714819 | None:intergenic | 30.0% | |
| TTCAAATGCAACATTCACTT+TGG | + | chr5_4:57714835-57714854 | None:intergenic | 30.0% | |
| TATCAGTTCTTATTGTTGAG+AGG | - | chr5_4:57714883-57714902 | Msa0859370:intron | 30.0% | |
| !! | ATTATTAGCTCTGATATCCT+AGG | + | chr5_4:57715104-57715123 | None:intergenic | 30.0% |
| TAACAAACGTGGTTATACAA+AGG | - | chr5_4:57715165-57715184 | Msa0859370:intron | 30.0% | |
| !!! | CAAACAGGAACTTATTTTGT+TGG | + | chr5_4:57715338-57715357 | None:intergenic | 30.0% |
| CCTAGATTATAACATTGTCA+GGG | + | chr5_4:57715371-57715390 | None:intergenic | 30.0% | |
| TCCTAGATTATAACATTGTC+AGG | + | chr5_4:57715372-57715391 | None:intergenic | 30.0% | |
| !! | TTGATGATTTTCTGAAAGTC+AGG | + | chr5_4:57715521-57715540 | None:intergenic | 30.0% |
| TAAGAAAAAGACTGAGATCT+TGG | - | chr5_4:57715655-57715674 | Msa0859370:intron | 30.0% | |
| TGAAAAGTGAAAACTCACTT+GGG | + | chr5_4:57715723-57715742 | None:intergenic | 30.0% | |
| AGAAAATCAAATCTACCACA+TGG | + | chr5_4:57715867-57715886 | None:intergenic | 30.0% | |
| AATTAGTTCCATCAATTGCT+TGG | + | chr5_4:57715920-57715939 | None:intergenic | 30.0% | |
| GAAAAAACTGGATTGCAATT+GGG | + | chr5_4:57715991-57716010 | None:intergenic | 30.0% | |
| !! | AAACACATGTTCTTTTGACT+AGG | + | chr5_4:57716428-57716447 | None:intergenic | 30.0% |
| AAAAGAACATGTGTTTCCTT+TGG | - | chr5_4:57716432-57716451 | Msa0859370:intron | 30.0% | |
| AAAGAACATGTGTTTCCTTT+GGG | - | chr5_4:57716433-57716452 | Msa0859370:intron | 30.0% | |
| CATAATTCTTCATCGGATAA+GGG | - | chr5_4:57716481-57716500 | Msa0859370:intron | 30.0% | |
| !! | AAGTGACTTGCTTCTTATTA+TGG | - | chr5_4:57716704-57716723 | Msa0859370:intron | 30.0% |
| AATCCAAGTGTAATGATAGT+TGG | + | chr5_4:57716734-57716753 | None:intergenic | 30.0% | |
| AGCTTGTAAGGTGAATAATA+TGG | + | chr5_4:57716819-57716838 | None:intergenic | 30.0% | |
| CAATGGTTAAAGACCTTAAA+TGG | + | chr5_4:57717121-57717140 | None:intergenic | 30.0% | |
| AACCAATCTAGTATTAGTCA+TGG | - | chr5_4:57717332-57717351 | Msa0859370:intron | 30.0% | |
| AATCTAGTATTAGTCATGGA+GGG | - | chr5_4:57717336-57717355 | Msa0859370:intron | 30.0% | |
| TGCTTATATTTCATTCTGGA+AGG | - | chr5_4:57717452-57717471 | Msa0859370:intron | 30.0% | |
| TAATATAGTAGAAAGGAAGC+TGG | - | chr5_4:57717544-57717563 | Msa0859370:intron | 30.0% | |
| AATATAGTAGAAAGGAAGCT+GGG | - | chr5_4:57717545-57717564 | Msa0859370:intron | 30.0% | |
| ATTAGTGACATAAAAGAAGG+GGG | + | chr5_4:57717705-57717724 | None:intergenic | 30.0% | |
| ATAGTATCAAGCGTATATTC+AGG | + | chr5_4:57717757-57717776 | None:intergenic | 30.0% | |
| ! | TGGTTAGTTGTACATATAGT+TGG | + | chr5_4:57718037-57718056 | None:intergenic | 30.0% |
| !! | TAATCTGGTATTGACTTTAG+GGG | - | chr5_4:57718326-57718345 | Msa0859370:intron | 30.0% |
| ! | CTTCATGATGCCACATTTTT+AGG | + | chr5_4:57711981-57712000 | None:intergenic | 35.0% |
| GCATCATGAAGTGATTTGAT+TGG | - | chr5_4:57711990-57712009 | Msa0859370:intron | 35.0% | |
| !! | TATCAGTTTAGCTCTGCATA+TGG | - | chr5_4:57712048-57712067 | Msa0859370:CDS | 35.0% |
| ! | TCATGTGTCATTGTTTGATG+TGG | + | chr5_4:57712138-57712157 | None:intergenic | 35.0% |
| AAGGTGAAAAGAGAGTTGTT+AGG | - | chr5_4:57712400-57712419 | Msa0859370:intron | 35.0% | |
| AGGTGAAAAGAGAGTTGTTA+GGG | - | chr5_4:57712401-57712420 | Msa0859370:intron | 35.0% | |
| GTGAAGAAAGAGTTGAAAAG+TGG | - | chr5_4:57712466-57712485 | Msa0859370:intron | 35.0% | |
| ! | ATGGGTTGTTGAGAAATGAA+TGG | - | chr5_4:57712575-57712594 | Msa0859370:intron | 35.0% |
| ! | TTTGGAATTATGCACTGGAA+TGG | - | chr5_4:57712924-57712943 | Msa0859370:intron | 35.0% |
| TTATGCACTGGAATGGTTAA+AGG | - | chr5_4:57712931-57712950 | Msa0859370:intron | 35.0% | |
| !! | TTTAGGGTTGGTGTATGAAT+AGG | - | chr5_4:57712989-57713008 | Msa0859370:intron | 35.0% |
| AAGAAAGAACAGTATCCATG+GGG | + | chr5_4:57713129-57713148 | None:intergenic | 35.0% | |
| !! | TTTCACTTTGCTGTTGATCT+GGG | - | chr5_4:57713171-57713190 | Msa0859370:intron | 35.0% |
| !! | CTTAAAAAGCATCGAGGTAT+CGG | - | chr5_4:57713247-57713266 | Msa0859370:intron | 35.0% |
| TGAAAAGAAGCCAACTAAGT+AGG | - | chr5_4:57713270-57713289 | Msa0859370:intron | 35.0% | |
| TAAAACAGGTATGCTGCAAA+TGG | + | chr5_4:57713314-57713333 | None:intergenic | 35.0% | |
| AAAGAACAAGAACAAGCATG+GGG | - | chr5_4:57713349-57713368 | Msa0859370:intron | 35.0% | |
| GGTTCAAATATTCTTGGAGT+GGG | + | chr5_4:57713387-57713406 | None:intergenic | 35.0% | |
| CACTCCAAGAATATTTGAAC+CGG | - | chr5_4:57713386-57713405 | Msa0859370:intron | 35.0% | |
| GATTTCTATCGTGATTGGTA+AGG | + | chr5_4:57713424-57713443 | None:intergenic | 35.0% | |
| ATTCAAGGGTTAAACTTAGC+GGG | + | chr5_4:57713473-57713492 | None:intergenic | 35.0% | |
| AATTTCCACCATAATCCGAT+AGG | - | chr5_4:57713582-57713601 | Msa0859370:intron | 35.0% | |
| !! | AGATAAGTTGGCTTCTTTTG+GGG | + | chr5_4:57713691-57713710 | None:intergenic | 35.0% |
| !! | CAGATAAGTTGGCTTCTTTT+GGG | + | chr5_4:57713692-57713711 | None:intergenic | 35.0% |
| GAATGATTGTGCAGATAAGT+TGG | + | chr5_4:57713703-57713722 | None:intergenic | 35.0% | |
| !! | TGTGTCATATGCTTTGAAGA+GGG | + | chr5_4:57713842-57713861 | None:intergenic | 35.0% |
| !! | ATGTGTCATATGCTTTGAAG+AGG | + | chr5_4:57713843-57713862 | None:intergenic | 35.0% |
| CATAAGGAAATATGAGTCTG+GGG | - | chr5_4:57713899-57713918 | Msa0859370:intron | 35.0% | |
| ATAAGGAAATATGAGTCTGG+GGG | - | chr5_4:57713900-57713919 | Msa0859370:intron | 35.0% | |
| GTATGCAAAAAATACCAGCA+GGG | - | chr5_4:57713922-57713941 | Msa0859370:intron | 35.0% | |
| ! | AAGGTAGATTGATGGTTAAG+GGG | + | chr5_4:57713955-57713974 | None:intergenic | 35.0% |
| ! | GAAGGTAGATTGATGGTTAA+GGG | + | chr5_4:57713956-57713975 | None:intergenic | 35.0% |
| !!! | GAGTTTGTGGTTGTTTTTAG+AGG | - | chr5_4:57714134-57714153 | Msa0859370:intron | 35.0% |
| ! | TTTGGGTTTGTAGATTCAAG+AGG | - | chr5_4:57714164-57714183 | Msa0859370:intron | 35.0% |
| ! | CTTTTTCCATAAACTTCACG+AGG | + | chr5_4:57714191-57714210 | None:intergenic | 35.0% |
| AAAAAGCTGTGCGATTTGAT+GGG | - | chr5_4:57714205-57714224 | Msa0859370:intron | 35.0% | |
| ! | GATTCAGTTGCAAATGGTTT+TGG | - | chr5_4:57714263-57714282 | Msa0859370:intron | 35.0% |
| !!! | TTGTTGACTTTTTAGGTGGT+TGG | - | chr5_4:57714385-57714404 | Msa0859370:CDS | 35.0% |
| !! | TGGTTGGTATTCTAGAGTAT+GGG | - | chr5_4:57714401-57714420 | Msa0859370:CDS | 35.0% |
| ATCACTCCTTTCATTAATCG+TGG | - | chr5_4:57714460-57714479 | Msa0859370:CDS | 35.0% | |
| AGTTCCATCACCAGATATTA+AGG | - | chr5_4:57714537-57714556 | Msa0859370:intron | 35.0% | |
| TTCACCTTAATATCTGGTGA+TGG | + | chr5_4:57714544-57714563 | None:intergenic | 35.0% | |
| AATGCAACATTCACTTTGGA+AGG | + | chr5_4:57714831-57714850 | None:intergenic | 35.0% | |
| ! | TATTGTTGAGAGGTTTTCTG+AGG | - | chr5_4:57714893-57714912 | Msa0859370:intron | 35.0% |
| GCAAAATGACAATGATTCCT+AGG | + | chr5_4:57714922-57714941 | None:intergenic | 35.0% | |
| ATGTCAAACGTCCAAAACAT+CGG | + | chr5_4:57715079-57715098 | None:intergenic | 35.0% | |
| GTTCTATGCTATAACAAACG+TGG | - | chr5_4:57715154-57715173 | Msa0859370:intron | 35.0% | |
| CAAGATGTAATGCATGAACA+CGG | + | chr5_4:57715191-57715210 | None:intergenic | 35.0% | |
| CCCTGACAATGTTATAATCT+AGG | - | chr5_4:57715368-57715387 | Msa0859370:intron | 35.0% | |
| AATCTAGGAGAATTACTTGG+TGG | - | chr5_4:57715383-57715402 | Msa0859370:intron | 35.0% | |
| TCTTGAGTGACTATATGGAT+GGG | + | chr5_4:57715458-57715477 | None:intergenic | 35.0% | |
| ATCTTGAGTGACTATATGGA+TGG | + | chr5_4:57715459-57715478 | None:intergenic | 35.0% | |
| AGACATCTTGAGTGACTATA+TGG | + | chr5_4:57715463-57715482 | None:intergenic | 35.0% | |
| ! | CAATTTTGCTGAAAATGTCG+AGG | - | chr5_4:57715619-57715638 | Msa0859370:intron | 35.0% |
| GAAAAGTGAAAACTCACTTG+GGG | + | chr5_4:57715722-57715741 | None:intergenic | 35.0% | |
| CTGAAAAGTGAAAACTCACT+TGG | + | chr5_4:57715724-57715743 | None:intergenic | 35.0% | |
| !! | TGAGTTTTCACTTTTCAGAC+TGG | - | chr5_4:57715726-57715745 | Msa0859370:intron | 35.0% |
| !! | GAGTTTTCACTTTTCAGACT+GGG | - | chr5_4:57715727-57715746 | Msa0859370:intron | 35.0% |
| !! | GTTGATGAAGAATTTTCTGC+AGG | - | chr5_4:57715783-57715802 | Msa0859370:CDS | 35.0% |
| !! | ATTTTCTGCAGGAGTATACA+AGG | - | chr5_4:57715794-57715813 | Msa0859370:CDS | 35.0% |
| !! | TTTTCTGCAGGAGTATACAA+GGG | - | chr5_4:57715795-57715814 | Msa0859370:CDS | 35.0% |
| ! | ATACAAGGGATGGTTCTATT+TGG | - | chr5_4:57715809-57715828 | Msa0859370:CDS | 35.0% |
| GGTTCTATTTGGAAGAATGA+CGG | - | chr5_4:57715820-57715839 | Msa0859370:CDS | 35.0% | |
| !! | TTTCTTATCAGAGAGGTGTT+TGG | - | chr5_4:57715882-57715901 | Msa0859370:CDS | 35.0% |
| ACTAATTCATCAAACACTGC+AGG | - | chr5_4:57715933-57715952 | Msa0859370:intron | 35.0% | |
| GGAAAAAACTGGATTGCAAT+TGG | + | chr5_4:57715992-57716011 | None:intergenic | 35.0% | |
| !!! | AAATCGAAATTTTGAGGCAG+TGG | - | chr5_4:57716122-57716141 | Msa0859370:intron | 35.0% |
| ! | TAATGAGTTGGATCAAAGTC+AGG | + | chr5_4:57716297-57716316 | None:intergenic | 35.0% |
| !! | TTCTTTTGACTAGGTCACAA+AGG | + | chr5_4:57716419-57716438 | None:intergenic | 35.0% |
| AAGAACATGTGTTTCCTTTG+GGG | - | chr5_4:57716434-57716453 | Msa0859370:intron | 35.0% | |
| CGTGTACCATAATTCTTCAT+CGG | - | chr5_4:57716474-57716493 | Msa0859370:intron | 35.0% | |
| CCTTATCCGATGAAGAATTA+TGG | + | chr5_4:57716483-57716502 | None:intergenic | 35.0% | |
| CCATAATTCTTCATCGGATA+AGG | - | chr5_4:57716480-57716499 | Msa0859370:intron | 35.0% | |
| TAAAAGGGGATCTTGGTAAA+GGG | + | chr5_4:57716530-57716549 | None:intergenic | 35.0% | |
| TTAAAAGGGGATCTTGGTAA+AGG | + | chr5_4:57716531-57716550 | None:intergenic | 35.0% | |
| AGTATGTTAAAAGGGGATCT+TGG | + | chr5_4:57716537-57716556 | None:intergenic | 35.0% | |
| TTGAATGAAGATAGACGAAC+TGG | + | chr5_4:57716587-57716606 | None:intergenic | 35.0% | |
| TCTCATGTGACTGGAATATT+GGG | - | chr5_4:57716620-57716639 | Msa0859370:intron | 35.0% | |
| ! | CTTAATCATTTTGCCCTTAC+AGG | + | chr5_4:57716687-57716706 | None:intergenic | 35.0% |
| !! | TGACTTGCTTCTTATTATGG+CGG | - | chr5_4:57716707-57716726 | Msa0859370:intron | 35.0% |
| AAATGTCATGTGAGCTTGTA+AGG | + | chr5_4:57716831-57716850 | None:intergenic | 35.0% | |
| GATATGACCGATTATCTCAT+TGG | - | chr5_4:57717180-57717199 | Msa0859370:intron | 35.0% | |
| CTCCATGACTAATACTAGAT+TGG | + | chr5_4:57717337-57717356 | None:intergenic | 35.0% | |
| CAATCTAGTATTAGTCATGG+AGG | - | chr5_4:57717335-57717354 | Msa0859370:intron | 35.0% | |
| TGAGATATTGTCTGGTTGTA+TGG | - | chr5_4:57717609-57717628 | Msa0859370:intron | 35.0% | |
| ATTGTCTGGTTGTATGGTAT+TGG | - | chr5_4:57717615-57717634 | Msa0859370:intron | 35.0% | |
| TTAGTGACATAAAAGAAGGG+GGG | + | chr5_4:57717704-57717723 | None:intergenic | 35.0% | |
| !! | TTGTACATATGTCGGTTTAG+TGG | + | chr5_4:57718069-57718088 | None:intergenic | 35.0% |
| !! | AATCTGGTATTGACTTTAGG+GGG | - | chr5_4:57718327-57718346 | Msa0859370:intron | 35.0% |
| ! | CGTGAATCTAGAATAGATGT+TGG | + | chr5_4:57718383-57718402 | None:intergenic | 35.0% |
| ! | TGGCTTAACTTTTGCCTAAA+AGG | + | chr5_4:57718643-57718662 | None:intergenic | 35.0% |
| AGAGATTCGCGAAATCATCA+TGG | + | chr5_4:57711734-57711753 | None:intergenic | 40.0% | |
| GACTTTAACGGTCTGTGAAA+CGG | + | chr5_4:57711775-57711794 | None:intergenic | 40.0% | |
| AAACAATACCAGCCTTAGGA+CGG | + | chr5_4:57711814-57711833 | None:intergenic | 40.0% | |
| TCTCAAACAATACCAGCCTT+AGG | + | chr5_4:57711818-57711837 | None:intergenic | 40.0% | |
| GAAAAGAGAGTTGTTAGGGT+TGG | - | chr5_4:57712405-57712424 | Msa0859370:intron | 40.0% | |
| TGATTGTAGGGTTGAATGAG+AGG | - | chr5_4:57712434-57712453 | Msa0859370:intron | 40.0% | |
| GTTGAAAAGTGGGAAGTTGA+AGG | - | chr5_4:57712477-57712496 | Msa0859370:intron | 40.0% | |
| TTGAAGGTTGCGTTGAGAAT+TGG | - | chr5_4:57712523-57712542 | Msa0859370:intron | 40.0% | |
| TGAAGGTTGCGTTGAGAATT+GGG | - | chr5_4:57712524-57712543 | Msa0859370:intron | 40.0% | |
| !!! | CATGTTTTGATGTCGGATAC+TGG | - | chr5_4:57712708-57712727 | Msa0859370:intron | 40.0% |
| ! | ACTCCTTTGATCAGAAGTGT+CGG | - | chr5_4:57712733-57712752 | Msa0859370:intron | 40.0% |
| ! | TGGGATTTGGAATTATGCAC+TGG | - | chr5_4:57712919-57712938 | Msa0859370:intron | 40.0% |
| ! | GAAGGAATTGCATTTAGGGT+TGG | - | chr5_4:57712977-57712996 | Msa0859370:intron | 40.0% |
| TCTGTTTCCTCTTCAAACAG+AGG | - | chr5_4:57713066-57713085 | Msa0859370:intron | 40.0% | |
| TACTTAGCCTCTGTTTGAAG+AGG | + | chr5_4:57713076-57713095 | None:intergenic | 40.0% | |
| !! | AGGCTAAGTACCGAGTTATT+TGG | - | chr5_4:57713086-57713105 | Msa0859370:intron | 40.0% |
| ACAAAATGCTAATACCCCCA+TGG | - | chr5_4:57713111-57713130 | Msa0859370:intron | 40.0% | |
| AGAAAGAACAGTATCCATGG+GGG | + | chr5_4:57713128-57713147 | None:intergenic | 40.0% | |
| !! | CTTTCACTTTGCTGTTGATC+TGG | - | chr5_4:57713170-57713189 | Msa0859370:intron | 40.0% |
| !! | CAAATGGTTGGTAGTGATTG+AGG | + | chr5_4:57713298-57713317 | None:intergenic | 40.0% |
| AAGAACAAGAACAAGCATGG+GGG | - | chr5_4:57713350-57713369 | Msa0859370:intron | 40.0% | |
| CGGTTCAAATATTCTTGGAG+TGG | + | chr5_4:57713388-57713407 | None:intergenic | 40.0% | |
| !! | GCTACCGGTTCAAATATTCT+TGG | + | chr5_4:57713393-57713412 | None:intergenic | 40.0% |
| GGGAAGATTTCTATCGTGAT+TGG | + | chr5_4:57713429-57713448 | None:intergenic | 40.0% | |
| GACAACACTGCTCAATTCAA+GGG | + | chr5_4:57713487-57713506 | None:intergenic | 40.0% | |
| TGACAACACTGCTCAATTCA+AGG | + | chr5_4:57713488-57713507 | None:intergenic | 40.0% | |
| ACTTTGTGATGCCATCCTAT+CGG | + | chr5_4:57713600-57713619 | None:intergenic | 40.0% | |
| !! | GCAGATAAGTTGGCTTCTTT+TGG | + | chr5_4:57713693-57713712 | None:intergenic | 40.0% |
| GGTATGCAAAAAATACCAGC+AGG | - | chr5_4:57713921-57713940 | Msa0859370:intron | 40.0% | |
| ! | GGAAGGTAGATTGATGGTTA+AGG | + | chr5_4:57713957-57713976 | None:intergenic | 40.0% |
| AATACATCACGCCAGAACTT+CGG | + | chr5_4:57713982-57714001 | None:intergenic | 40.0% | |
| GAAAAAGCTGTGCGATTTGA+TGG | - | chr5_4:57714204-57714223 | Msa0859370:intron | 40.0% | |
| AAAAGCTGTGCGATTTGATG+GGG | - | chr5_4:57714206-57714225 | Msa0859370:intron | 40.0% | |
| !!! | GCAAATGGTTTTGGAAGCAA+TGG | - | chr5_4:57714272-57714291 | Msa0859370:intron | 40.0% |
| !!! | AATGGTTTTGGAAGCAATGG+AGG | - | chr5_4:57714275-57714294 | Msa0859370:intron | 40.0% |
| !! | GTGGTTGGTATTCTAGAGTA+TGG | - | chr5_4:57714400-57714419 | Msa0859370:CDS | 40.0% |
| GGTTGTCCACGATTAATGAA+AGG | + | chr5_4:57714469-57714488 | None:intergenic | 40.0% | |
| ACAAGCAATAAAACCTTCCC+CGG | + | chr5_4:57714636-57714655 | None:intergenic | 40.0% | |
| ! | CATTTTGCAGCTTGAGCATT+TGG | - | chr5_4:57714971-57714990 | Msa0859370:intron | 40.0% |
| TTTGCTTCCAGAACAGTTCT+TGG | - | chr5_4:57715051-57715070 | Msa0859370:intron | 40.0% | |
| ! | AGTTCTTGGATCCGATGTTT+TGG | - | chr5_4:57715065-57715084 | Msa0859370:intron | 40.0% |
| !! | GATGTTTTGGACGTTTGACA+TGG | - | chr5_4:57715078-57715097 | Msa0859370:intron | 40.0% |
| CAGGGATTGACTAATCAAAC+AGG | + | chr5_4:57715353-57715372 | None:intergenic | 40.0% | |
| CACTCAAGATGTCTGATTTC+AGG | - | chr5_4:57715469-57715488 | Msa0859370:intron | 40.0% | |
| !!! | GGTAGTTTTGATGCATCTGT+TGG | + | chr5_4:57715500-57715519 | None:intergenic | 40.0% |
| CTGTTATCCTTGTCATCTGA+TGG | + | chr5_4:57715593-57715612 | None:intergenic | 40.0% | |
| GAATGGAAAAGTCACATTGC+AGG | + | chr5_4:57715700-57715719 | None:intergenic | 40.0% | |
| AATCAAATCTACCACATGGC+TGG | + | chr5_4:57715863-57715882 | None:intergenic | 40.0% | |
| CATTGACAATGATCCGTGAA+TGG | - | chr5_4:57716146-57716165 | Msa0859370:intron | 40.0% | |
| ! | ACATTGGTGTCTACCATTCA+CGG | + | chr5_4:57716162-57716181 | None:intergenic | 40.0% |
| CCAAAATTAAGACCTCTGCT+TGG | + | chr5_4:57716248-57716267 | None:intergenic | 40.0% | |
| ! | CCAAGCAGAGGTCTTAATTT+TGG | - | chr5_4:57716245-57716264 | Msa0859370:intron | 40.0% |
| TTTGACTAGGTCACAAAGGA+GGG | + | chr5_4:57716415-57716434 | None:intergenic | 40.0% | |
| !! | TTTTGACTAGGTCACAAAGG+AGG | + | chr5_4:57716416-57716435 | None:intergenic | 40.0% |
| CGAGCTGAGTATGTTAAAAG+GGG | + | chr5_4:57716544-57716563 | None:intergenic | 40.0% | |
| CTCTCATGTGACTGGAATAT+TGG | - | chr5_4:57716619-57716638 | Msa0859370:intron | 40.0% | |
| GGTCCAACTATCATTACACT+TGG | - | chr5_4:57716728-57716747 | Msa0859370:intron | 40.0% | |
| ATTACCATGAAACTGCTGCT+CGG | - | chr5_4:57716792-57716811 | Msa0859370:intron | 40.0% | |
| !! | AGTATGCTTAAAGAGTGCCT+CGG | + | chr5_4:57717018-57717037 | None:intergenic | 40.0% |
| TGGGCTTACTTATGAAGTTC+AGG | - | chr5_4:57717564-57717583 | Msa0859370:intron | 40.0% | |
| GAGTTGCATTGTCTTTGCTT+AGG | - | chr5_4:57717637-57717656 | Msa0859370:intron | 40.0% | |
| CAAGAGTTCAGATGCTAAAG+TGG | - | chr5_4:57717946-57717965 | Msa0859370:CDS | 40.0% | |
| TAACAGTTAACAGAACGTGC+TGG | - | chr5_4:57717978-57717997 | Msa0859370:intron | 40.0% | |
| AACAGTTAACAGAACGTGCT+GGG | - | chr5_4:57717979-57717998 | Msa0859370:intron | 40.0% | |
| CGGTTTAGTGGCCAATTATA+TGG | + | chr5_4:57718057-57718076 | None:intergenic | 40.0% | |
| TAGCAACTCTTGTAGATGAC+AGG | + | chr5_4:57718192-57718211 | None:intergenic | 40.0% | |
| GTCATCTACAAGAGTTGCTA+TGG | - | chr5_4:57718192-57718211 | Msa0859370:intron | 40.0% | |
| CAATATGTCACTGTCTTGCA+TGG | + | chr5_4:57718283-57718302 | None:intergenic | 40.0% | |
| CATGCAAGACAGTGACATAT+TGG | - | chr5_4:57718281-57718300 | Msa0859370:intron | 40.0% | |
| GAGGTCATCGGAGACTTTAA+CGG | + | chr5_4:57711787-57711806 | None:intergenic | 45.0% | |
| TTATCAGGTATCAGAGCGAC+CGG | - | chr5_4:57712321-57712340 | Msa0859370:intron | 45.0% | |
| GAAGTTGTGGAGGAGATGAA+GGG | - | chr5_4:57712361-57712380 | Msa0859370:intron | 45.0% | |
| AAGTTGTGGAGGAGATGAAG+GGG | - | chr5_4:57712362-57712381 | Msa0859370:intron | 45.0% | |
| AAGAGAGTTGTTAGGGTTGG+TGG | - | chr5_4:57712408-57712427 | Msa0859370:intron | 45.0% | |
| ! | AGAGAGTTGTTAGGGTTGGT+GGG | - | chr5_4:57712409-57712428 | Msa0859370:intron | 45.0% |
| TGTAGGGTTGAATGAGAGGT+TGG | - | chr5_4:57712438-57712457 | Msa0859370:intron | 45.0% | |
| GAAGGTTGCGTTGAGAATTG+GGG | - | chr5_4:57712525-57712544 | Msa0859370:intron | 45.0% | |
| CTCAACAACCCATACACCAA+CGG | + | chr5_4:57712568-57712587 | None:intergenic | 45.0% | |
| !! | ATGGTCTCAGTGCTTTGAAG+AGG | - | chr5_4:57712594-57712613 | Msa0859370:intron | 45.0% |
| !! | TTAATCCATGAAGCACTGCC+AGG | - | chr5_4:57712634-57712653 | Msa0859370:intron | 45.0% |
| ! | GATTGAGGTGCCTACTTAGT+TGG | + | chr5_4:57713283-57713302 | None:intergenic | 45.0% |
| ACAGGTATGCTGCAAATGGT+TGG | + | chr5_4:57713310-57713329 | None:intergenic | 45.0% | |
| GTGTTGTCAAATATCCGCCA+TGG | - | chr5_4:57713499-57713518 | Msa0859370:intron | 45.0% | |
| TTGTCAAATATCCGCCATGG+CGG | - | chr5_4:57713502-57713521 | Msa0859370:intron | 45.0% | |
| ! | GGATATCTGTGGCGGTTTTT+GGG | - | chr5_4:57713523-57713542 | Msa0859370:intron | 45.0% |
| ACACCCAATATCAGCCGATA+CGG | - | chr5_4:57713555-57713574 | Msa0859370:intron | 45.0% | |
| TCCACCATAATCCGATAGGA+TGG | - | chr5_4:57713586-57713605 | Msa0859370:intron | 45.0% | |
| GATGCCATCCTATCGGATTA+TGG | + | chr5_4:57713593-57713612 | None:intergenic | 45.0% | |
| GATAGGATGGCATCACAAAG+TGG | - | chr5_4:57713599-57713618 | Msa0859370:intron | 45.0% | |
| TGGCCAGTATGGCAGTATAT+CGG | - | chr5_4:57713619-57713638 | Msa0859370:intron | 45.0% | |
| ! | AGTATATCGGTGCTCCGAAA+TGG | - | chr5_4:57713632-57713651 | Msa0859370:intron | 45.0% |
| GTTCAATCCAGTGTTCTCGA+TGG | + | chr5_4:57713669-57713688 | None:intergenic | 45.0% | |
| ATACATCACGCCAGAACTTC+GGG | + | chr5_4:57713981-57714000 | None:intergenic | 45.0% | |
| AGAGGTCCTCGTGAAGTTTA+TGG | - | chr5_4:57714182-57714201 | Msa0859370:intron | 45.0% | |
| GAGTGGGATTCAGTTGCAAA+TGG | - | chr5_4:57714257-57714276 | Msa0859370:intron | 45.0% | |
| ACAACCTCTTTCGTTTCTCG+AGG | - | chr5_4:57714483-57714502 | Msa0859370:CDS | 45.0% | |
| GATTCCTCGAGAAACGAAAG+AGG | + | chr5_4:57714490-57714509 | None:intergenic | 45.0% | |
| AAGCAATAAAACCTTCCCCG+GGG | + | chr5_4:57714634-57714653 | None:intergenic | 45.0% | |
| CAAGCAATAAAACCTTCCCC+GGG | + | chr5_4:57714635-57714654 | None:intergenic | 45.0% | |
| TTGCAGCTTGAGCATTTGGA+TGG | - | chr5_4:57714975-57714994 | Msa0859370:intron | 45.0% | |
| TGCAGCTTGAGCATTTGGAT+GGG | - | chr5_4:57714976-57714995 | Msa0859370:intron | 45.0% | |
| ATGGGGAGCTTCTGTATTCA+GGG | - | chr5_4:57714994-57715013 | Msa0859370:intron | 45.0% | |
| ATCGGATCCAAGAACTGTTC+TGG | + | chr5_4:57715061-57715080 | None:intergenic | 45.0% | |
| CATTTCGCCATCAGATGACA+AGG | - | chr5_4:57715583-57715602 | Msa0859370:intron | 45.0% | |
| GTGAAAACTCACTTGGGGAA+TGG | + | chr5_4:57715717-57715736 | None:intergenic | 45.0% | |
| CATCAATTGCTTGGCTGCTT+TGG | + | chr5_4:57715911-57715930 | None:intergenic | 45.0% | |
| CAAAGCAGCCAAGCAATTGA+TGG | - | chr5_4:57715909-57715928 | Msa0859370:intron | 45.0% | |
| TACAACCGTATACACACTGC+CGG | - | chr5_4:57716215-57716234 | Msa0859370:intron | 45.0% | |
| TATCACCGGCAGTGTGTATA+CGG | + | chr5_4:57716223-57716242 | None:intergenic | 45.0% | |
| ACCTCTGCTTGGTATATCAC+CGG | + | chr5_4:57716237-57716256 | None:intergenic | 45.0% | |
| !! | GACCTTGTAAGAAGTGCCAA+TGG | - | chr5_4:57716328-57716347 | Msa0859370:intron | 45.0% |
| AGCCATTGGCACTTCTTACA+AGG | + | chr5_4:57716333-57716352 | None:intergenic | 45.0% | |
| !! | TAAGAAGTGCCAATGGCTCT+GGG | - | chr5_4:57716335-57716354 | Msa0859370:intron | 45.0% |
| TTGACTAGGTCACAAAGGAG+GGG | + | chr5_4:57716414-57716433 | None:intergenic | 45.0% | |
| ! | ATGTGTTTCCTTTGGGGACT+TGG | - | chr5_4:57716440-57716459 | Msa0859370:intron | 45.0% |
| GGATCTTGGTAAAGGGTCAT+TGG | + | chr5_4:57716523-57716542 | None:intergenic | 45.0% | |
| !! | TATGCTTAAAGAGTGCCTCG+GGG | + | chr5_4:57717016-57717035 | None:intergenic | 45.0% |
| !! | GTATGCTTAAAGAGTGCCTC+GGG | + | chr5_4:57717017-57717036 | None:intergenic | 45.0% |
| AAGGTCTTTAACCATTGCCC+CGG | - | chr5_4:57717124-57717143 | Msa0859370:intron | 45.0% | |
| AAATGTTAACTAGTCCCCCG+GGG | + | chr5_4:57717144-57717163 | None:intergenic | 45.0% | |
| GAAATGTTAACTAGTCCCCC+GGG | + | chr5_4:57717145-57717164 | None:intergenic | 45.0% | |
| GGAAATGTTAACTAGTCCCC+CGG | + | chr5_4:57717146-57717165 | None:intergenic | 45.0% | |
| TGAAGTAGTAGTCCCTGTCA+AGG | - | chr5_4:57718252-57718271 | Msa0859370:intron | 45.0% | |
| ! | TGCATGGACTAACCTTGACA+GGG | + | chr5_4:57718267-57718286 | None:intergenic | 45.0% |
| ! | TTGCATGGACTAACCTTGAC+AGG | + | chr5_4:57718268-57718287 | None:intergenic | 45.0% |
| TTGGTCGGAGAGATCTTGTG+CGG | + | chr5_4:57711610-57711629 | None:intergenic | 50.0% | |
| GGATCGGATCTGGTGAGAAT+GGG | + | chr5_4:57711685-57711704 | None:intergenic | 50.0% | |
| ATTGGACTTGGGATCGGATC+TGG | + | chr5_4:57711695-57711714 | None:intergenic | 50.0% | |
| GGTAGGATTGGACTTGGGAT+CGG | + | chr5_4:57711701-57711720 | None:intergenic | 50.0% | |
| AATCATCATGGTGAGAGGCG+AGG | + | chr5_4:57711722-57711741 | None:intergenic | 50.0% | |
| CGCGAAATCATCATGGTGAG+AGG | + | chr5_4:57711727-57711746 | None:intergenic | 50.0% | |
| GGAAGTTGTGGAGGAGATGA+AGG | - | chr5_4:57712360-57712379 | Msa0859370:intron | 50.0% | |
| !! | GGTTGGTGGGAGTGATTGTA+GGG | - | chr5_4:57712422-57712441 | Msa0859370:intron | 50.0% |
| TGGGAAGTTGAAGGTTGCTG+CGG | - | chr5_4:57712486-57712505 | Msa0859370:intron | 50.0% | |
| AAGTTGAAGGTTGCTGCGGA+AGG | - | chr5_4:57712490-57712509 | Msa0859370:intron | 50.0% | |
| AGTTGAAGGTTGCTGCGGAA+GGG | - | chr5_4:57712491-57712510 | Msa0859370:intron | 50.0% | |
| GGAAGGGTTGAAGGAGTTGA+AGG | - | chr5_4:57712507-57712526 | Msa0859370:intron | 50.0% | |
| ATCGAGAGCCGTTGGTGTAT+GGG | - | chr5_4:57712557-57712576 | Msa0859370:intron | 50.0% | |
| ! | GCACCGACACTTCTGATCAA+AGG | + | chr5_4:57712739-57712758 | None:intergenic | 50.0% |
| GGTAAGGTCATCTGAGCTAC+CGG | + | chr5_4:57713408-57713427 | None:intergenic | 50.0% | |
| ! | CGGATATCTGTGGCGGTTTT+TGG | - | chr5_4:57713522-57713541 | Msa0859370:intron | 50.0% |
| !! | GTATCGGCTGATATTGGGTG+TGG | + | chr5_4:57713556-57713575 | None:intergenic | 50.0% |
| !! | TCGCCGTATCGGCTGATATT+GGG | + | chr5_4:57713561-57713580 | None:intergenic | 50.0% |
| GGTGGAAATTCTCGCCGTAT+CGG | + | chr5_4:57713572-57713591 | None:intergenic | 50.0% | |
| GCCATCCTATCGGATTATGG+TGG | + | chr5_4:57713590-57713609 | None:intergenic | 50.0% | |
| GCATCACAAAGTGGCCAGTA+TGG | - | chr5_4:57713608-57713627 | Msa0859370:intron | 50.0% | |
| ! | GCACCGATATACTGCCATAC+TGG | + | chr5_4:57713625-57713644 | None:intergenic | 50.0% |
| TGGCGAATGGCGTTCCATTT+CGG | + | chr5_4:57713649-57713668 | None:intergenic | 50.0% | |
| ACTGTGTAGGAAACTCGTGC+AGG | - | chr5_4:57713761-57713780 | Msa0859370:intron | 50.0% | |
| CTGTGTAGGAAACTCGTGCA+GGG | - | chr5_4:57713762-57713781 | Msa0859370:intron | 50.0% | |
| ! | TTTGGGAAGCATAGTGCTGC+TGG | + | chr5_4:57713793-57713812 | None:intergenic | 50.0% |
| GCAAAAAATACCAGCAGGGC+AGG | - | chr5_4:57713926-57713945 | Msa0859370:intron | 50.0% | |
| TACATCACGCCAGAACTTCG+GGG | + | chr5_4:57713980-57713999 | None:intergenic | 50.0% | |
| TTTATGACACAGACCACCCC+CGG | - | chr5_4:57714614-57714633 | Msa0859370:CDS | 50.0% | |
| AGCAATAAAACCTTCCCCGG+GGG | + | chr5_4:57714633-57714652 | None:intergenic | 50.0% | |
| !!! | GAGGTTTTCTGAGGTCACCT+AGG | - | chr5_4:57714902-57714921 | Msa0859370:intron | 50.0% |
| GCAGCTTGAGCATTTGGATG+GGG | - | chr5_4:57714977-57714996 | Msa0859370:intron | 50.0% | |
| GATGGGGAGCTTCTGTATTC+AGG | - | chr5_4:57714993-57715012 | Msa0859370:intron | 50.0% | |
| TTGGACGTTTGACATGGCCT+AGG | - | chr5_4:57715084-57715103 | Msa0859370:intron | 50.0% | |
| ! | CTGCAGGAGTATACAAGGGA+TGG | - | chr5_4:57715799-57715818 | Msa0859370:CDS | 50.0% |
| TATCCTGTCATCCAGCCATG+TGG | - | chr5_4:57715849-57715868 | Msa0859370:CDS | 50.0% | |
| !! | GTAAGAAGTGCCAATGGCTC+TGG | - | chr5_4:57716334-57716353 | Msa0859370:intron | 50.0% |
| ATTCCAGGAAAAGGGGGATC+TGG | + | chr5_4:57716364-57716383 | None:intergenic | 50.0% | |
| TGCCACGATTCCAGGAAAAG+GGG | + | chr5_4:57716371-57716390 | None:intergenic | 50.0% | |
| CTGCCACGATTCCAGGAAAA+GGG | + | chr5_4:57716372-57716391 | None:intergenic | 50.0% | |
| TGACTAGGTCACAAAGGAGG+GGG | + | chr5_4:57716413-57716432 | None:intergenic | 50.0% | |
| CACTTTGACCAAGTCCCCAA+AGG | + | chr5_4:57716451-57716470 | None:intergenic | 50.0% | |
| TGGTAAAGGGTCATTGGCAG+CGG | + | chr5_4:57716517-57716536 | None:intergenic | 50.0% | |
| TCACGTGTCTCTCATGTGAC+TGG | - | chr5_4:57716611-57716630 | Msa0859370:intron | 50.0% | |
| !! | ATGCTTAAAGAGTGCCTCGG+GGG | + | chr5_4:57717015-57717034 | None:intergenic | 50.0% |
| AGGTCTTTAACCATTGCCCC+GGG | - | chr5_4:57717125-57717144 | Msa0859370:intron | 50.0% | |
| !! | GGAGAGAGGGGAGTTTTGGT+CGG | + | chr5_4:57711625-57711644 | None:intergenic | 55.0% |
| TCGATGAGAAGGCGGAGATC+GGG | + | chr5_4:57711651-57711670 | None:intergenic | 55.0% | |
| GTCGATGAGAAGGCGGAGAT+CGG | + | chr5_4:57711652-57711671 | None:intergenic | 55.0% | |
| GGGATCGGATCTGGTGAGAA+TGG | + | chr5_4:57711686-57711705 | None:intergenic | 55.0% | |
| GGCGAGGTAGGATTGGACTT+GGG | + | chr5_4:57711706-57711725 | None:intergenic | 55.0% | |
| AGGCGAGGTAGGATTGGACT+TGG | + | chr5_4:57711707-57711726 | None:intergenic | 55.0% | |
| ATCATGGTGAGAGGCGAGGT+AGG | + | chr5_4:57711718-57711737 | None:intergenic | 55.0% | |
| TGAAACGGCGTCGTTGCAGA+GGG | + | chr5_4:57711760-57711779 | None:intergenic | 55.0% | |
| ! | TAGGACGGTGTCGAGGTCAT+CGG | + | chr5_4:57711799-57711818 | None:intergenic | 55.0% |
| ATGACCTCGACACCGTCCTA+AGG | - | chr5_4:57711799-57711818 | Msa0859370:intron | 55.0% | |
| TGTGGAGGTGAGGGAAGTTG+TGG | - | chr5_4:57712348-57712367 | Msa0859370:intron | 55.0% | |
| GGAGATGAAGGGGAAGAGTG+AGG | - | chr5_4:57712372-57712391 | Msa0859370:intron | 55.0% | |
| GGGGAAGAGTGAGGAGTTGA+AGG | - | chr5_4:57712381-57712400 | Msa0859370:intron | 55.0% | |
| !! | GGGTTGGTGGGAGTGATTGT+AGG | - | chr5_4:57712421-57712440 | Msa0859370:intron | 55.0% |
| GGTTGCGTTGAGAATTGGGG+AGG | - | chr5_4:57712528-57712547 | Msa0859370:intron | 55.0% | |
| GGAAGATGATCGAGAGCCGT+TGG | - | chr5_4:57712549-57712568 | Msa0859370:intron | 55.0% | |
| GATCGAGAGCCGTTGGTGTA+TGG | - | chr5_4:57712556-57712575 | Msa0859370:intron | 55.0% | |
| !! | CAGAAGTGTCGGTGCTACAG+AGG | - | chr5_4:57712744-57712763 | Msa0859370:intron | 55.0% |
| !! | CTCGCCGTATCGGCTGATAT+TGG | + | chr5_4:57713562-57713581 | None:intergenic | 55.0% |
| CCAGTGTTCTCGATGGCGAA+TGG | + | chr5_4:57713662-57713681 | None:intergenic | 55.0% | |
| CCATTCGCCATCGAGAACAC+TGG | - | chr5_4:57713659-57713678 | Msa0859370:intron | 55.0% | |
| TCGGGGGGAAGGTAGATTGA+TGG | + | chr5_4:57713963-57713982 | None:intergenic | 55.0% | |
| ACATCACGCCAGAACTTCGG+GGG | + | chr5_4:57713979-57713998 | None:intergenic | 55.0% | |
| TTATGACACAGACCACCCCC+GGG | - | chr5_4:57714615-57714634 | Msa0859370:CDS | 55.0% | |
| AATAAAACCTTCCCCGGGGG+TGG | + | chr5_4:57714630-57714649 | None:intergenic | 55.0% | |
| CTACCACATGGCTGGATGAC+AGG | + | chr5_4:57715855-57715874 | None:intergenic | 55.0% | |
| GCCGGTGATATACCAAGCAG+AGG | - | chr5_4:57716233-57716252 | Msa0859370:intron | 55.0% | |
| ! | TCCCCCTTTTCCTGGAATCG+TGG | - | chr5_4:57716366-57716385 | Msa0859370:intron | 55.0% |
| GCCACGATTCCAGGAAAAGG+GGG | + | chr5_4:57716370-57716389 | None:intergenic | 55.0% | |
| CCTGCCACGATTCCAGGAAA+AGG | + | chr5_4:57716373-57716392 | None:intergenic | 55.0% | |
| ! | CCTTTTCCTGGAATCGTGGC+AGG | - | chr5_4:57716370-57716389 | Msa0859370:intron | 55.0% |
| AGATCACCTGCCACGATTCC+AGG | + | chr5_4:57716379-57716398 | None:intergenic | 55.0% | |
| GGTAAAGGGTCATTGGCAGC+GGG | + | chr5_4:57716516-57716535 | None:intergenic | 55.0% | |
| TTACAGGCCTCGTGCTTGAG+GGG | + | chr5_4:57716671-57716690 | None:intergenic | 55.0% | |
| CTTACAGGCCTCGTGCTTGA+GGG | + | chr5_4:57716672-57716691 | None:intergenic | 55.0% | |
| CTCAAGCACGAGGCCTGTAA+GGG | - | chr5_4:57716671-57716690 | Msa0859370:intron | 55.0% | |
| TGGTCCGAGCAGCAGTTTCA+TGG | + | chr5_4:57716799-57716818 | None:intergenic | 55.0% | |
| !! | CTTATTAAGGAGTGCCCCCG+AGG | - | chr5_4:57716998-57717017 | Msa0859370:intron | 55.0% |
| GGTCTTTAACCATTGCCCCG+GGG | - | chr5_4:57717126-57717145 | Msa0859370:intron | 55.0% | |
| GTCTTTAACCATTGCCCCGG+GGG | - | chr5_4:57717127-57717146 | Msa0859370:intron | 55.0% | |
| GATGAGAAGGCGGAGATCGG+GGG | + | chr5_4:57711649-57711668 | None:intergenic | 60.0% | |
| CGATGAGAAGGCGGAGATCG+GGG | + | chr5_4:57711650-57711669 | None:intergenic | 60.0% | |
| AGTCGACGCGGTCGATGAGA+AGG | + | chr5_4:57711662-57711681 | None:intergenic | 60.0% | |
| GGTGAGAATGGGAGTCGACG+CGG | + | chr5_4:57711674-57711693 | None:intergenic | 60.0% | |
| GGTGAGAGGCGAGGTAGGAT+TGG | + | chr5_4:57711713-57711732 | None:intergenic | 60.0% | |
| GTGAAACGGCGTCGTTGCAG+AGG | + | chr5_4:57711761-57711780 | None:intergenic | 60.0% | |
| TCAGGTATCAGAGCGACCGG+CGG | - | chr5_4:57712324-57712343 | Msa0859370:intron | 60.0% | |
| GGAGGTGAGGGAAGTTGTGG+AGG | - | chr5_4:57712351-57712370 | Msa0859370:intron | 60.0% | |
| GGTTGCTGCGGAAGGGTTGA+AGG | - | chr5_4:57712498-57712517 | Msa0859370:intron | 60.0% | |
| ACGTGCCTGGCAGTGCTTCA+TGG | + | chr5_4:57712642-57712661 | None:intergenic | 60.0% | |
| ACTGCCAGGCACGTTGACAC+CGG | - | chr5_4:57712648-57712667 | Msa0859370:intron | 60.0% | |
| ! | ACTACCGGTGTCAACGTGCC+TGG | + | chr5_4:57712655-57712674 | None:intergenic | 60.0% |
| !! | TCCGCCATGGCGGATATCTG+TGG | - | chr5_4:57713512-57713531 | Msa0859370:intron | 60.0% |
| GCCACAGATATCCGCCATGG+CGG | + | chr5_4:57713516-57713535 | None:intergenic | 60.0% | |
| !! | GCCATGGCGGATATCTGTGG+CGG | - | chr5_4:57713515-57713534 | Msa0859370:intron | 60.0% |
| ACCGCCACAGATATCCGCCA+TGG | + | chr5_4:57713519-57713538 | None:intergenic | 60.0% | |
| TAAGGGGATTCCTGCCCTGC+TGG | + | chr5_4:57713939-57713958 | None:intergenic | 60.0% | |
| CTACCTTCCCCCCGAAGTTC+TGG | - | chr5_4:57713968-57713987 | Msa0859370:intron | 60.0% | |
| CATCACGCCAGAACTTCGGG+GGG | + | chr5_4:57713978-57713997 | None:intergenic | 60.0% | |
| TATGACACAGACCACCCCCG+GGG | - | chr5_4:57714616-57714635 | Msa0859370:CDS | 60.0% | |
| ATCTGGCAGCCCAGAGCCAT+TGG | + | chr5_4:57716347-57716366 | None:intergenic | 60.0% | |
| ! | CTGCCAGATCCCCCTTTTCC+TGG | - | chr5_4:57716358-57716377 | Msa0859370:intron | 60.0% |
| GTCACAAAGGAGGGGGAGCT+CGG | + | chr5_4:57716406-57716425 | None:intergenic | 60.0% | |
| AGACGAACTGGCCACGTGCT+CGG | + | chr5_4:57716575-57716594 | None:intergenic | 60.0% | |
| CCTTACAGGCCTCGTGCTTG+AGG | + | chr5_4:57716673-57716692 | None:intergenic | 60.0% | |
| CCTCAAGCACGAGGCCTGTA+AGG | - | chr5_4:57716670-57716689 | Msa0859370:intron | 60.0% | |
| TAACTAGTCCCCCGGGGCAA+TGG | + | chr5_4:57717138-57717157 | None:intergenic | 60.0% | |
| ! | GGGCGGAGAGAGGGGAGTTT+TGG | + | chr5_4:57711629-57711648 | None:intergenic | 65.0% |
| CGACGCGGTCGATGAGAAGG+CGG | + | chr5_4:57711659-57711678 | None:intergenic | 65.0% | |
| ! | CCAGCCTTAGGACGGTGTCG+AGG | + | chr5_4:57711806-57711825 | None:intergenic | 65.0% |
| CCTCGACACCGTCCTAAGGC+TGG | - | chr5_4:57711803-57711822 | Msa0859370:intron | 65.0% | |
| ATCAGAGCGACCGGCGGATG+TGG | - | chr5_4:57712330-57712349 | Msa0859370:intron | 65.0% | |
| ACCGGCGGATGTGGAGGTGA+GGG | - | chr5_4:57712339-57712358 | Msa0859370:intron | 65.0% | |
| TCCCTCACCTCCACATCCGC+CGG | + | chr5_4:57712343-57712362 | None:intergenic | 65.0% | |
| ACGCCAGAACTTCGGGGGGA+AGG | + | chr5_4:57713974-57713993 | None:intergenic | 65.0% | |
| TCCACAGCCCCTCAAGCACG+AGG | - | chr5_4:57716661-57716680 | Msa0859370:intron | 65.0% | |
| GAGATCGGGGGCGGAGAGAG+GGG | + | chr5_4:57711637-57711656 | None:intergenic | 70.0% | |
| GGAGATCGGGGGCGGAGAGA+GGG | + | chr5_4:57711638-57711657 | None:intergenic | 70.0% | |
| GAGAAGGCGGAGATCGGGGG+CGG | + | chr5_4:57711646-57711665 | None:intergenic | 70.0% | |
| AGAGCGACCGGCGGATGTGG+AGG | - | chr5_4:57712333-57712352 | Msa0859370:intron | 70.0% | |
| GACCGGCGGATGTGGAGGTG+AGG | - | chr5_4:57712338-57712357 | Msa0859370:intron | 70.0% | |
| ACACAGACCACCCCCGGGGA+AGG | - | chr5_4:57714620-57714639 | Msa0859370:CDS | 70.0% | |
| TGGCCACGTGCTCGGCACGT+GGG | + | chr5_4:57716567-57716586 | None:intergenic | 70.0% | |
| GCCTCGTGCTTGAGGGGCTG+TGG | + | chr5_4:57716665-57716684 | None:intergenic | 70.0% | |
| CGGAGATCGGGGGCGGAGAG+AGG | + | chr5_4:57711639-57711658 | None:intergenic | 75.0% | |
| CTGGCCACGTGCTCGGCACG+TGG | + | chr5_4:57716568-57716587 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 57711564 | 57718746 | 57711564 | ID=Msa0859370;Name=Msa0859370 |
| chr5_4 | mRNA | 57711564 | 57718746 | 57711564 | ID=Msa0859370-mRNA-1;Parent=Msa0859370;Name=Msa0859370-mRNA-1;_AED=0.13;_eAED=0.13;_QI=0|0.55|0.5|0.8|0.88|0.9|10|0|485 |
| chr5_4 | exon | 57718498 | 57718746 | 57718498 | ID=Msa0859370-mRNA-1:exon:17604;Parent=Msa0859370-mRNA-1 |
| chr5_4 | exon | 57717740 | 57717982 | 57717740 | ID=Msa0859370-mRNA-1:exon:17603;Parent=Msa0859370-mRNA-1 |
| chr5_4 | exon | 57716014 | 57716133 | 57716014 | ID=Msa0859370-mRNA-1:exon:17602;Parent=Msa0859370-mRNA-1 |
| chr5_4 | exon | 57715752 | 57715910 | 57715752 | ID=Msa0859370-mRNA-1:exon:17601;Parent=Msa0859370-mRNA-1 |
| chr5_4 | exon | 57715168 | 57715329 | 57715168 | ID=Msa0859370-mRNA-1:exon:17600;Parent=Msa0859370-mRNA-1 |
| chr5_4 | exon | 57714586 | 57714819 | 57714586 | ID=Msa0859370-mRNA-1:exon:17599;Parent=Msa0859370-mRNA-1 |
| chr5_4 | exon | 57714356 | 57714505 | 57714356 | ID=Msa0859370-mRNA-1:exon:17598;Parent=Msa0859370-mRNA-1 |
| chr5_4 | exon | 57712037 | 57712129 | 57712037 | ID=Msa0859370-mRNA-1:exon:17597;Parent=Msa0859370-mRNA-1 |
| chr5_4 | exon | 57711657 | 57711662 | 57711657 | ID=Msa0859370-mRNA-1:exon:17596;Parent=Msa0859370-mRNA-1 |
| chr5_4 | exon | 57711564 | 57711605 | 57711564 | ID=Msa0859370-mRNA-1:exon:17595;Parent=Msa0859370-mRNA-1 |
| chr5_4 | CDS | 57718498 | 57718746 | 57718498 | ID=Msa0859370-mRNA-1:cds;Parent=Msa0859370-mRNA-1 |
| chr5_4 | CDS | 57717740 | 57717982 | 57717740 | ID=Msa0859370-mRNA-1:cds;Parent=Msa0859370-mRNA-1 |
| chr5_4 | CDS | 57716014 | 57716133 | 57716014 | ID=Msa0859370-mRNA-1:cds;Parent=Msa0859370-mRNA-1 |
| chr5_4 | CDS | 57715752 | 57715910 | 57715752 | ID=Msa0859370-mRNA-1:cds;Parent=Msa0859370-mRNA-1 |
| chr5_4 | CDS | 57715168 | 57715329 | 57715168 | ID=Msa0859370-mRNA-1:cds;Parent=Msa0859370-mRNA-1 |
| chr5_4 | CDS | 57714586 | 57714819 | 57714586 | ID=Msa0859370-mRNA-1:cds;Parent=Msa0859370-mRNA-1 |
| chr5_4 | CDS | 57714356 | 57714505 | 57714356 | ID=Msa0859370-mRNA-1:cds;Parent=Msa0859370-mRNA-1 |
| chr5_4 | CDS | 57712037 | 57712129 | 57712037 | ID=Msa0859370-mRNA-1:cds;Parent=Msa0859370-mRNA-1 |
| chr5_4 | CDS | 57711657 | 57711662 | 57711657 | ID=Msa0859370-mRNA-1:cds;Parent=Msa0859370-mRNA-1 |
| chr5_4 | CDS | 57711564 | 57711605 | 57711564 | ID=Msa0859370-mRNA-1:cds;Parent=Msa0859370-mRNA-1 |
| Gene Sequence |
| Protein sequence |
