AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0861150

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0861150 MtrunA17_Chr5g0440931 100.000 149 0 0 1 149 1 149 1.84e-106 300
Msa0861150 MtrunA17_Chr6g0460211 99.329 149 1 0 1 149 1 149 6.63e-106 298
Msa0861150 MtrunA17_Chr3g0093271 98.658 149 2 0 1 149 52 200 1.81e-105 299
Msa0861150 MtrunA17_Chr7g0254731 97.987 149 3 0 1 149 1 149 7.12e-104 293
Msa0861150 MtrunA17_Chr1g0188171 78.378 148 32 0 1 148 1 148 1.02e-83 242
Msa0861150 MtrunA17_Chr1g0188171 45.070 71 36 1 82 149 6 76 2.07e-11 58.2
Msa0861150 MtrunA17_Chr1g0166281 77.703 148 33 0 1 148 1 148 1.41e-82 239
Msa0861150 MtrunA17_Chr1g0166281 47.692 65 34 0 85 149 12 76 4.16e-12 60.1
Msa0861150 MtrunA17_Chr7g0274101 63.514 148 54 0 1 148 1 148 4.51e-58 177
Msa0861150 MtrunA17_Chr1g0185001 57.823 147 61 1 1 147 1 146 1.93e-56 173
Msa0861150 MtrunA17_Chr1g0185001 40.260 77 45 1 73 149 1 76 4.79e-12 60.1
Msa0861150 MtrunA17_Chr5g0398751 50.336 149 72 1 1 149 1 147 1.49e-48 153
Msa0861150 MtrunA17_Chr3g0100541 53.425 146 53 1 1 146 41 171 7.71e-44 142
Msa0861150 MtrunA17_Chr8g0366401 46.622 148 76 1 4 148 9 156 8.60e-44 142
Msa0861150 MtrunA17_Chr7g0245231 45.455 143 78 0 4 146 22 164 1.57e-39 131
Msa0861150 MtrunA17_Chr7g0245231 46.970 66 35 0 84 149 29 94 2.32e-12 61.2
Msa0861150 MtrunA17_Chr6g0450921 44.056 143 80 0 4 146 21 163 1.49e-37 126
Msa0861150 MtrunA17_Chr6g0450921 43.421 76 43 0 74 149 18 93 1.50e-12 61.6
Msa0861150 MtrunA17_Chr1g0161211 48.551 138 71 0 12 149 46 183 3.05e-37 126
Msa0861150 MtrunA17_Chr1g0161211 51.613 62 30 0 84 145 45 106 5.32e-15 68.9
Msa0861150 MtrunA17_Chr1g0161211 49.254 67 34 0 7 73 114 180 1.57e-12 62.0
Msa0861150 MtrunA17_Chr3g0100511 46.897 145 62 1 1 145 41 170 4.60e-37 125
Msa0861150 MtrunA17_Chr4g0062221 42.553 141 79 1 8 146 7 147 7.01e-36 122
Msa0861150 MtrunA17_Chr4g0062221 46.875 64 34 0 16 79 90 153 1.06e-12 62.0
Msa0861150 MtrunA17_Chr3g0100561 46.207 145 63 1 1 145 41 170 6.15e-35 119
Msa0861150 MtrunA17_Chr8g0391691 48.855 131 67 0 12 142 36 166 6.70e-34 117
Msa0861150 MtrunA17_Chr8g0391691 56.250 64 28 0 6 69 103 166 9.33e-17 73.2
Msa0861150 MtrunA17_Chr8g0368681 41.958 143 81 1 6 146 6 148 7.60e-34 116
Msa0861150 MtrunA17_Chr8g0368681 39.706 68 41 0 12 79 87 154 7.79e-11 57.0
Msa0861150 MtrunA17_Chr4g0033601 44.928 138 74 1 11 146 4 141 4.95e-33 114
Msa0861150 MtrunA17_Chr8g0392951 44.444 135 74 1 12 146 24 157 6.45e-32 111
Msa0861150 MtrunA17_Chr8g0392951 43.284 67 38 0 7 73 91 157 2.16e-12 61.2
Msa0861150 MtrunA17_Chr3g0100471 68.000 75 24 0 1 75 41 115 1.58e-31 108
Msa0861150 MtrunA17_Chr5g0434951 42.963 135 76 1 12 146 4 137 8.03e-31 108
Msa0861150 MtrunA17_Chr3g0111371 42.963 135 73 1 12 146 5 135 1.42e-28 102
Msa0861150 MtrunA17_Chr3g0111371 43.750 64 36 0 12 75 74 137 5.26e-13 62.4
Msa0861150 MtrunA17_Chr1g0169581 39.416 137 81 1 12 146 4 140 3.38e-28 101
Msa0861150 MtrunA17_Chr1g0169581 43.750 64 36 0 12 75 79 142 2.59e-12 60.5
Msa0861150 MtrunA17_Chr7g0267751 41.781 146 82 2 1 146 429 571 1.94e-27 106
Msa0861150 MtrunA17_Chr5g0444171 40.940 149 84 3 1 148 386 531 2.23e-27 106
Msa0861150 MtrunA17_Chr6g0482731 40.288 139 81 2 12 149 26 163 2.63e-27 100
Msa0861150 MtrunA17_Chr6g0482731 43.836 73 41 0 6 78 93 165 5.31e-13 63.2
Msa0861150 MtrunA17_Chr4g0074811 40.136 147 84 3 1 146 385 528 8.86e-27 104
Msa0861150 MtrunA17_Chr7g0256171 44.286 140 76 1 11 148 4 143 1.00e-26 98.2
Msa0861150 MtrunA17_Chr7g0245911 39.865 148 80 3 8 146 43 190 1.08e-26 99.0
Msa0861150 MtrunA17_Chr8g0351681 39.865 148 81 3 7 146 44 191 2.99e-26 98.2
Msa0861150 MtrunA17_Chr8g0385341 39.041 146 86 2 1 146 324 466 4.65e-26 102
Msa0861150 MtrunA17_Chr1g0200601 40.541 148 81 3 1 146 324 466 5.25e-26 102
Msa0861150 MtrunA17_Chr1g0157131 37.838 148 86 3 1 146 368 511 7.28e-26 101
Msa0861150 MtrunA17_Chr7g0256701 41.135 141 78 3 11 146 72 212 7.48e-26 97.4
Msa0861150 MtrunA17_Chr4g0059951 38.514 148 86 4 1 146 367 511 9.91e-26 101
Msa0861150 MtrunA17_Chr1g0176751 38.356 146 87 2 1 146 418 560 1.20e-25 101
Msa0861150 MtrunA17_Chr3g0131181 37.671 146 88 2 1 146 323 465 1.49e-25 100
Msa0861150 MtrunA17_Chr5g0397101 39.189 148 84 3 1 146 360 503 2.16e-25 100
Msa0861150 MtrunA17_Chr4g0064231 40.523 153 73 2 12 146 64 216 2.82e-25 96.3
Msa0861150 MtrunA17_Chr3g0098951 38.816 152 86 2 1 146 377 527 4.11e-25 99.8
Msa0861150 MtrunA17_Chr8g0387671 37.838 148 86 3 1 146 360 503 4.15e-24 97.1
Msa0861150 MtrunA17_Chr7g0242561 36.301 146 92 1 1 146 350 494 1.88e-23 95.1
Msa0861150 MtrunA17_Chr5g0448721 36.301 146 90 2 1 146 390 532 2.04e-23 95.1
Msa0861150 MtrunA17_Chr1g0169621 33.537 164 82 2 12 148 4 167 3.66e-23 89.4
Msa0861150 MtrunA17_Chr1g0170281 35.616 146 91 2 1 146 412 554 5.26e-23 94.0
Msa0861150 MtrunA17_Chr0c02g0489761 37.671 146 89 2 1 146 372 515 9.81e-23 93.2
Msa0861150 MtrunA17_Chr5g0441691 36.735 147 89 3 1 146 362 505 5.07e-22 90.9
Msa0861150 MtrunA17_Chr2g0329371 41.429 140 78 2 11 146 63 202 6.61e-22 87.0
Msa0861150 MtrunA17_Chr4g0044961 35.766 137 86 1 10 146 55 189 1.31e-21 85.9
Msa0861150 MtrunA17_Chr4g0057651 35.714 140 80 3 12 147 6 139 1.65e-21 84.3
Msa0861150 MtrunA17_Chr4g0033371 35.374 147 92 3 1 147 366 509 1.76e-21 89.4
Msa0861150 MtrunA17_Chr7g0225921 32.624 141 92 3 8 147 2 140 1.82e-21 84.3
Msa0861150 MtrunA17_Chr7g0225921 41.791 67 39 0 7 73 74 140 1.12e-11 58.9
Msa0861150 MtrunA17_Chr3g0116151 32.374 139 83 2 13 146 7 139 2.48e-21 84.0
Msa0861150 MtrunA17_Chr3g0116141 32.374 139 83 2 13 146 6 138 2.84e-21 83.6
Msa0861150 MtrunA17_Chr3g0100501 38.194 144 36 2 1 144 41 131 3.43e-21 83.6
Msa0861150 MtrunA17_Chr3g0100461 64.815 54 19 0 93 146 53 106 1.04e-20 81.6
Msa0861150 MtrunA17_Chr3g0100461 42.667 75 36 1 1 75 41 108 1.35e-13 63.2
Msa0861150 MtrunA17_Chr5g0409441 32.847 137 92 0 6 142 16 152 1.07e-20 82.8
Msa0861150 MtrunA17_Chr1g0173541 31.757 148 100 1 1 148 346 492 1.84e-20 86.7
Msa0861150 MtrunA17_Chr7g0257751 31.757 148 100 1 1 148 352 498 4.52e-20 85.5
Msa0861150 MtrunA17_Chr4g0057661 34.286 140 82 3 12 147 6 139 6.00e-20 80.1
Msa0861150 MtrunA17_Chr4g0057641 34.286 140 82 3 12 147 6 139 6.76e-20 80.1
Msa0861150 MtrunA17_Chr4g0074791 34.014 147 82 5 1 146 390 522 7.17e-19 82.0
Msa0861150 MtrunA17_Chr5g0402361 36.691 139 81 2 12 147 48 182 1.15e-18 80.9
Msa0861150 MtrunA17_Chr5g0402361 35.000 140 83 3 12 147 220 355 9.79e-17 75.5
Msa0861150 MtrunA17_Chr5g0402361 29.375 160 85 3 12 143 120 279 4.09e-14 68.2
Msa0861150 MtrunA17_Chr6g0459231 27.857 140 100 1 8 147 4 142 1.45e-18 76.6
Msa0861150 MtrunA17_Chr6g0459231 37.313 67 42 0 7 73 75 141 5.20e-11 57.0
Msa0861150 MtrunA17_Chr8g0373691 32.394 142 94 2 6 146 47 187 5.86e-18 76.3
Msa0861150 MtrunA17_Chr5g0402331 35.000 140 83 3 12 147 48 183 9.32e-18 75.9
Msa0861150 MtrunA17_Chr1g0176421 33.094 139 90 2 1 139 455 590 1.23e-17 78.6
Msa0861150 MtrunA17_Chr7g0245371 32.192 146 87 2 13 146 25 170 3.32e-16 71.6
Msa0861150 MtrunA17_Chr5g0396261 33.036 112 73 1 36 145 1 112 5.07e-15 67.0
Msa0861150 MtrunA17_Chr3g0121191 48.529 68 35 0 6 73 150 217 7.48e-15 68.9
Msa0861150 MtrunA17_Chr3g0121191 32.847 137 82 1 11 147 92 218 7.86e-14 66.2
Msa0861150 MtrunA17_Chr5g0405421 27.632 152 98 4 1 146 395 540 9.84e-14 67.4
Msa0861150 MtrunA17_Chr7g0252401 30.556 144 91 4 1 142 23 159 2.03e-12 63.5
Msa0861150 MtrunA17_Chr4g0042491 44.595 74 41 0 73 146 102 175 5.89e-12 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0861150 AT3G43810.2 99.324 148 1 0 1 148 1 148 5.88e-106 301
Msa0861150 AT3G43810.2 45.455 77 41 1 73 149 1 76 4.82e-13 64.3
Msa0861150 AT3G43810.1 99.329 149 1 0 1 149 1 149 9.16e-106 298
Msa0861150 AT2G27030.3 98.658 149 2 0 1 149 1 149 1.76e-105 298
Msa0861150 AT2G27030.3 46.269 67 36 0 12 78 85 151 5.97e-13 63.5
Msa0861150 AT5G21274.1 98.658 149 2 0 1 149 1 149 2.43e-105 297
Msa0861150 AT3G56800.1 98.658 149 2 0 1 149 1 149 3.46e-105 296
Msa0861150 AT2G41110.1 98.658 149 2 0 1 149 1 149 3.46e-105 296
Msa0861150 AT2G27030.1 98.658 149 2 0 1 149 1 149 3.46e-105 296
Msa0861150 AT1G66410.1 97.987 149 3 0 1 149 1 149 5.98e-105 296
Msa0861150 AT5G37780.1 97.987 149 3 0 1 149 1 149 5.98e-105 296
Msa0861150 AT1G66410.2 91.824 159 3 1 1 149 1 159 1.01e-101 288
Msa0861150 AT2G41110.2 91.304 161 2 1 1 149 1 161 2.84e-101 287
Msa0861150 AT5G37780.2 89.024 164 3 1 1 149 1 164 1.37e-100 286
Msa0861150 AT5G37780.3 83.429 175 3 1 1 149 1 175 7.31e-99 281
Msa0861150 AT5G37780.4 97.581 124 3 0 26 149 13 136 6.23e-86 248
Msa0861150 AT5G37780.4 47.692 65 34 0 12 76 72 136 2.49e-13 63.5
Msa0861150 AT3G22930.1 77.083 144 33 0 4 147 27 170 1.19e-80 236
Msa0861150 AT3G43810.4 100.000 113 0 0 37 149 1 113 1.01e-78 228
Msa0861150 AT3G43810.4 47.692 65 34 0 12 76 49 113 1.70e-13 63.2
Msa0861150 AT3G43810.3 100.000 113 0 0 37 149 1 113 1.01e-78 228
Msa0861150 AT3G43810.3 47.692 65 34 0 12 76 49 113 1.70e-13 63.2
Msa0861150 AT4G14640.1 74.126 143 37 0 5 147 6 148 2.01e-78 229
Msa0861150 AT1G66410.4 97.345 113 3 0 37 149 1 113 2.98e-77 225
Msa0861150 AT1G66410.4 47.692 65 34 0 12 76 49 113 5.73e-14 64.3
Msa0861150 AT1G66410.3 97.345 113 3 0 37 149 1 113 2.98e-77 225
Msa0861150 AT1G66410.3 47.692 65 34 0 12 76 49 113 5.73e-14 64.3
Msa0861150 AT4G14640.2 72.951 122 33 0 26 147 9 130 1.33e-65 196
Msa0861150 AT4G14640.2 46.774 62 33 0 12 73 68 129 4.37e-13 62.8
Msa0861150 AT2G41090.1 64.430 149 50 1 1 149 1 146 2.12e-61 187
Msa0861150 AT2G41100.7 56.627 166 55 2 1 149 55 220 4.81e-54 172
Msa0861150 AT2G41100.7 61.702 94 33 1 4 97 148 238 2.21e-30 111
Msa0861150 AT2G41100.7 45.669 127 53 2 36 146 1 127 1.28e-29 109
Msa0861150 AT2G41100.6 56.627 166 55 2 1 149 55 220 4.81e-54 172
Msa0861150 AT2G41100.6 61.702 94 33 1 4 97 148 238 2.21e-30 111
Msa0861150 AT2G41100.6 45.669 127 53 2 36 146 1 127 1.28e-29 109
Msa0861150 AT2G41100.3 56.627 166 55 2 1 149 55 220 4.81e-54 172
Msa0861150 AT2G41100.3 61.702 94 33 1 4 97 148 238 2.21e-30 111
Msa0861150 AT2G41100.3 45.669 127 53 2 36 146 1 127 1.28e-29 109
Msa0861150 AT2G41100.4 56.627 166 55 2 1 149 90 255 1.37e-53 172
Msa0861150 AT2G41100.4 51.235 162 63 2 1 146 1 162 1.57e-49 161
Msa0861150 AT2G41100.4 61.702 94 33 1 4 97 183 273 4.70e-30 111
Msa0861150 AT2G41100.1 56.627 166 55 2 1 149 90 255 1.37e-53 172
Msa0861150 AT2G41100.1 51.235 162 63 2 1 146 1 162 1.57e-49 161
Msa0861150 AT2G41100.1 61.702 94 33 1 4 97 183 273 4.70e-30 111
Msa0861150 AT4G14640.3 72.816 103 28 0 5 107 6 108 4.39e-53 164
Msa0861150 AT3G22930.2 74.757 103 26 0 4 106 27 129 9.94e-53 163
Msa0861150 AT3G22930.2 46.774 62 33 0 85 146 35 96 3.04e-11 57.8
Msa0861150 AT3G51920.1 51.351 148 72 0 1 148 1 148 6.03e-47 149
Msa0861150 AT1G12310.1 48.980 147 73 1 3 149 4 148 1.95e-46 148
Msa0861150 AT1G62820.1 48.299 147 74 1 3 149 4 148 3.64e-46 147
Msa0861150 AT1G32250.1 43.421 152 80 1 1 146 5 156 2.75e-41 135
Msa0861150 AT3G50360.1 47.183 142 75 0 5 146 20 161 3.44e-40 133
Msa0861150 AT3G50360.1 45.714 70 38 0 80 149 22 91 4.32e-13 63.5
Msa0861150 AT4G37010.1 43.662 142 80 0 5 146 20 161 5.86e-36 122
Msa0861150 AT4G37010.2 43.662 142 80 0 5 146 24 165 6.08e-36 122
Msa0861150 AT2G41100.2 53.077 130 44 2 37 149 1 130 3.56e-35 121
Msa0861150 AT2G41100.2 61.702 94 33 1 4 97 58 148 1.85e-31 112
Msa0861150 AT2G41100.5 60.825 97 35 1 1 97 1 94 2.50e-34 117
Msa0861150 AT2G41100.5 50.649 77 37 1 73 149 1 76 1.36e-17 74.7
Msa0861150 AT1G24620.1 46.763 139 73 1 9 147 34 171 1.89e-33 116
Msa0861150 AT1G18530.1 41.379 145 77 2 7 146 2 143 3.53e-33 115
Msa0861150 AT1G18530.1 42.647 68 39 0 12 79 82 149 1.65e-11 58.9
Msa0861150 AT3G03000.1 44.521 146 80 1 4 148 12 157 8.01e-33 114
Msa0861150 AT3G25600.1 40.397 151 82 2 1 146 1 148 5.11e-32 112
Msa0861150 AT3G25600.1 41.176 68 40 0 12 79 87 154 2.27e-11 58.9
Msa0861150 AT1G05990.1 44.604 139 74 2 11 146 4 142 4.47e-31 109
Msa0861150 AT1G18210.2 42.222 135 74 1 12 146 23 153 4.80e-31 110
Msa0861150 AT1G18210.1 42.222 135 74 1 12 146 23 153 4.80e-31 110
Msa0861150 AT1G66400.1 43.478 138 76 1 12 147 15 152 5.03e-31 109
Msa0861150 AT5G37770.1 42.446 139 76 1 12 146 17 155 7.74e-30 106
Msa0861150 AT5G37770.1 44.615 65 36 0 10 74 92 156 1.31e-13 64.7
Msa0861150 AT5G37770.2 42.446 139 76 1 12 146 17 155 7.74e-30 106
Msa0861150 AT5G37770.2 44.615 65 36 0 10 74 92 156 1.31e-13 64.7
Msa0861150 AT1G76040.1 41.781 146 83 2 1 146 167 310 1.31e-29 110
Msa0861150 AT1G76040.4 41.781 146 83 2 1 146 167 310 1.31e-29 110
Msa0861150 AT1G73630.1 40.146 137 78 1 12 148 20 152 1.94e-29 105
Msa0861150 AT4G03290.1 45.390 141 72 2 11 146 4 144 2.06e-29 105
Msa0861150 AT4G03290.1 46.875 64 32 1 14 75 83 146 1.88e-11 58.9
Msa0861150 AT2G43290.1 42.657 143 75 3 11 146 64 206 2.23e-29 107
Msa0861150 AT1G76040.2 41.781 146 83 2 1 146 405 548 1.81e-28 109
Msa0861150 AT3G59440.1 40.816 147 84 2 2 146 41 186 1.95e-27 101
Msa0861150 AT5G23580.1 40.411 146 84 2 1 146 316 458 5.91e-27 105
Msa0861150 AT2G15680.1 37.324 142 87 1 5 146 43 182 9.19e-27 99.4
Msa0861150 AT4G21940.1 40.268 149 85 3 1 148 395 540 2.31e-26 103
Msa0861150 AT4G21940.2 40.268 149 85 3 1 148 395 540 2.83e-26 103
Msa0861150 AT4G23650.1 39.189 148 84 3 1 146 372 515 1.25e-25 101
Msa0861150 AT4G23650.1 43.478 69 36 1 82 147 377 445 5.08e-11 59.7
Msa0861150 AT1G35670.1 38.356 146 87 2 1 146 320 462 1.43e-25 101
Msa0861150 AT4G09570.1 39.189 148 83 3 1 146 319 461 2.50e-25 100
Msa0861150 AT4G12860.1 40.580 138 80 1 11 146 4 141 2.98e-25 94.7
Msa0861150 AT4G04720.2 38.926 149 87 3 1 148 373 518 5.57e-25 99.8
Msa0861150 AT4G04720.1 38.926 149 87 3 1 148 373 518 5.57e-25 99.8
Msa0861150 AT4G38230.1 37.671 146 88 2 1 146 174 316 6.29e-25 97.8
Msa0861150 AT3G07490.1 41.304 138 79 1 11 146 4 141 6.96e-25 93.6
Msa0861150 AT3G10660.2 36.986 146 89 2 1 146 480 622 7.33e-25 99.8
Msa0861150 AT3G10660.1 36.986 146 89 2 1 146 480 622 7.33e-25 99.8
Msa0861150 AT5G19360.1 40.816 147 83 3 1 146 362 505 8.57e-25 99.4
Msa0861150 AT4G38230.2 37.671 146 88 2 1 146 348 490 1.68e-24 98.2
Msa0861150 AT4G38230.4 37.671 146 88 2 1 146 318 460 1.83e-24 98.2
Msa0861150 AT4G38230.3 37.671 146 88 2 1 146 318 460 1.83e-24 98.2
Msa0861150 AT1G61950.1 39.189 148 84 3 1 146 393 536 2.01e-24 98.2
Msa0861150 AT5G12180.1 40.136 147 84 3 1 146 367 510 3.83e-24 97.4
Msa0861150 AT3G10190.1 40.146 137 79 3 12 146 70 205 7.15e-24 92.4
Msa0861150 AT5G04870.1 36.301 146 90 2 1 146 444 586 7.36e-24 96.7
Msa0861150 AT1G74740.1 35.570 149 93 3 1 148 353 499 1.92e-23 95.5
Msa0861150 AT3G20410.2 36.986 146 90 2 1 146 385 528 2.90e-23 95.1
Msa0861150 AT3G20410.1 36.986 146 90 2 1 146 385 528 2.90e-23 95.1
Msa0861150 AT2G17290.1 36.301 146 90 2 1 146 379 521 4.84e-23 94.4
Msa0861150 AT2G17290.2 36.301 146 90 2 1 146 379 521 4.84e-23 94.4
Msa0861150 AT2G38910.1 35.616 146 91 2 1 146 428 570 1.23e-22 93.2
Msa0861150 AT4G04695.1 36.913 149 90 3 1 148 325 470 1.32e-22 92.8
Msa0861150 AT4G35310.2 35.616 146 91 2 1 146 391 533 1.41e-22 93.2
Msa0861150 AT4G35310.1 35.616 146 91 2 1 146 391 533 1.41e-22 93.2
Msa0861150 AT4G04740.4 37.671 146 87 3 2 146 363 505 1.59e-22 92.8
Msa0861150 AT4G04740.6 37.671 146 87 3 2 146 363 505 1.59e-22 92.8
Msa0861150 AT4G04740.5 37.671 146 87 3 2 146 363 505 1.59e-22 92.8
Msa0861150 AT4G04740.3 37.671 146 87 3 2 146 363 505 1.59e-22 92.8
Msa0861150 AT4G04740.1 37.671 146 87 3 2 146 363 505 1.59e-22 92.8
Msa0861150 AT4G04740.7 37.671 146 87 3 2 146 363 505 1.59e-22 92.8
Msa0861150 AT3G50770.1 36.429 140 84 2 12 146 64 203 1.93e-22 89.0
Msa0861150 AT3G50770.1 44.118 68 38 0 82 149 61 128 7.42e-13 63.5
Msa0861150 AT1G50700.1 35.616 146 92 2 1 146 367 510 2.24e-22 92.4
Msa0861150 AT4G04700.1 38.776 147 86 3 1 146 325 468 5.24e-22 91.3
Msa0861150 AT5G17470.1 37.500 136 82 2 15 148 5 139 5.37e-22 86.3
Msa0861150 AT5G17470.1 47.541 61 32 0 14 74 79 139 2.82e-12 60.8
Msa0861150 AT5G42380.1 36.232 138 87 1 10 146 47 184 1.94e-21 85.5
Msa0861150 AT1G18890.1 37.333 150 89 4 1 148 357 503 2.23e-21 89.7
Msa0861150 AT3G57530.1 36.054 147 90 3 1 146 357 500 3.20e-21 89.0
Msa0861150 AT5G12480.2 34.899 149 95 2 1 148 259 406 3.95e-21 88.6
Msa0861150 AT5G12480.1 34.899 149 95 2 1 148 353 500 5.19e-21 88.6
Msa0861150 AT2G36180.1 41.176 136 76 3 15 147 3 137 1.32e-20 82.4
Msa0861150 AT3G03400.1 36.434 129 80 1 13 139 6 134 2.46e-20 81.6
Msa0861150 AT3G51850.1 33.562 146 96 1 1 146 348 492 3.11e-20 86.3
Msa0861150 AT3G03410.1 35.556 135 78 1 14 148 4 129 9.44e-20 79.7
Msa0861150 AT5G19450.2 32.886 149 98 2 1 148 351 498 3.03e-19 83.6
Msa0861150 AT5G19450.1 32.886 149 98 2 1 148 351 498 3.03e-19 83.6
Msa0861150 AT2G41410.1 34.752 141 89 3 11 148 69 209 3.49e-19 80.5
Msa0861150 AT4G04710.2 35.374 147 91 3 1 146 326 469 3.62e-19 83.2
Msa0861150 AT4G04710.3 35.374 147 91 3 1 146 312 455 3.79e-19 83.2
Msa0861150 AT4G04710.1 35.374 147 91 3 1 146 339 482 4.07e-19 83.2
Msa0861150 AT2G41860.2 32.192 146 98 1 1 146 348 492 2.04e-18 81.3
Msa0861150 AT2G41860.1 32.192 146 98 1 1 146 348 492 2.06e-18 81.3
Msa0861150 AT4G04710.4 35.570 149 90 4 1 146 339 484 5.90e-18 79.7
Msa0861150 AT1G50700.2 30.814 172 91 3 1 146 367 536 6.40e-18 79.7
Msa0861150 AT2G31500.1 32.667 150 96 4 1 147 360 507 2.18e-17 78.2
Msa0861150 AT4G20780.1 33.775 151 78 3 17 146 34 183 1.23e-16 73.2
Msa0861150 AT4G04740.2 35.606 132 81 3 2 132 363 491 1.77e-16 75.5
Msa0861150 AT5G44460.1 33.566 143 83 2 16 146 32 174 3.18e-15 69.3
Msa0861150 AT1G76040.3 37.624 101 62 1 1 101 405 504 4.81e-15 71.2
Msa0861150 AT4G21940.3 38.384 99 60 1 1 99 395 492 7.81e-15 70.9
Msa0861150 AT3G51850.2 34.906 106 68 1 1 106 348 452 1.74e-14 69.7
Msa0861150 AT2G17890.1 28.289 152 97 5 1 146 404 549 1.89e-14 69.7
Msa0861150 AT5G66210.1 27.632 152 98 4 1 146 358 503 3.09e-14 68.9
Msa0861150 AT5G66210.2 27.632 152 98 4 1 146 358 503 3.09e-14 68.9
Msa0861150 AT1G76640.1 29.932 147 97 2 4 146 14 158 4.20e-14 65.9
Msa0861150 AT1G76650.1 32.609 138 86 2 12 146 43 176 7.38e-14 65.9
Msa0861150 AT1G76650.3 32.609 138 86 2 12 146 43 176 7.38e-14 65.9
Msa0861150 AT5G49480.1 28.758 153 101 3 1 146 7 158 3.81e-13 63.5
Msa0861150 AT1G50700.3 36.364 99 62 1 1 99 367 464 5.26e-13 65.5
Msa0861150 AT1G21550.1 30.719 153 82 4 11 147 9 153 1.15e-12 62.0
Msa0861150 AT5G66210.3 26.718 131 90 3 1 125 358 488 1.91e-11 61.2
Msa0861150 AT1G76650.2 31.884 138 77 3 12 146 43 166 3.27e-11 58.5

Find 72 sgRNAs with CRISPR-Local

Find 171 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGAGCAGATCTCTGAGTTTA+AGG 0.180468 5_4:+60310759 Msa0861150:CDS
AATTGTTCCATGTTTATAAA+TGG 0.226682 5_4:-60313634 None:intergenic
GTCCCTTTGTTTAAGTAGTT+TGG 0.236182 5_4:+60313557 Msa0861150:three_prime_UTR
GCCATCAGGTTAAGGAATTC+AGG 0.271939 5_4:-60313101 None:intergenic
ATTCAGCCTCAGTTGGGTTC+TGG 0.282126 5_4:-60313025 None:intergenic
ATGAAGTTGAACGATTTCTT+AGG 0.296802 5_4:+60313756 Msa0861150:three_prime_UTR
CCCAACTGAGGCTGAATTGC+AGG 0.330056 5_4:+60313031 Msa0861150:CDS
AATGTAAGAAGAAGAGAAAA+AGG 0.333507 5_4:-60310638 None:intergenic
CCATTGGAGGAAGGAAGATT+TGG 0.335907 5_4:-60310720 None:intergenic
GTGTTTGACAAGGATCAAAA+TGG 0.341319 5_4:+60313176 Msa0861150:CDS
CCTTCATCTTGCGGGCCATC+AGG 0.361788 5_4:-60313115 None:intergenic
ATCAGTATCCTTCATCTTGC+GGG 0.362125 5_4:-60313123 None:intergenic
CATCGCCATCCTTATCGAAT+AGG 0.413564 5_4:-60310792 None:intergenic
GAAAAGCACATGAACAGAAA+AGG 0.415904 5_4:+60313384 Msa0861150:three_prime_UTR
TCTTGCGGGCCATCAGGTTA+AGG 0.421012 5_4:-60313109 None:intergenic
AACGAAACCACCATTGGATA+TGG 0.429648 5_4:-60313794 None:intergenic
TCCTGCAATTCAGCCTCAGT+TGG 0.439040 5_4:-60313032 None:intergenic
CCCTGAATTCCTTAACCTGA+TGG 0.451258 5_4:+60313100 Msa0861150:CDS
AGCTTTCAGCCTATTCGATA+AGG 0.462509 5_4:+60310783 Msa0861150:CDS
CCTGCAATTCAGCCTCAGTT+GGG 0.478310 5_4:-60313031 None:intergenic
CTTCTGACTGCCATATCCAA+TGG 0.478746 5_4:+60313784 Msa0861150:three_prime_UTR
TACATGTGGGTGATTAGTAC+AGG 0.479141 5_4:+60313675 Msa0861150:three_prime_UTR
AAAAGCACATGAACAGAAAA+GGG 0.487092 5_4:+60313385 Msa0861150:three_prime_UTR
AGCTTCCTTGAGCTCTTCCT+CGG 0.488636 5_4:-60313147 None:intergenic
AATCCAAACTACTTAAACAA+AGG 0.490247 5_4:-60313560 None:intergenic
ATCCAAACTACTTAAACAAA+GGG 0.500148 5_4:-60313559 None:intergenic
ATTCGCGAGGCTGATGTTGA+TGG 0.500826 5_4:+60313278 Msa0861150:CDS
CGTCATGTCATGACAAATCT+CGG 0.504845 5_4:+60313221 Msa0861150:CDS
ATTGACACAATAGCATAAGA+TGG 0.507070 5_4:-60313703 None:intergenic
CCTGATGGCCCGCAAGATGA+AGG 0.511279 5_4:+60313115 Msa0861150:CDS
CCATCAGGTTAAGGAATTCA+GGG 0.519282 5_4:-60313100 None:intergenic
AATCAGTATCCTTCATCTTG+CGG 0.519720 5_4:-60313124 None:intergenic
GAGGCTGATGTTGATGGTGA+TGG 0.534263 5_4:+60313284 Msa0861150:CDS
TTGTGTGTGTGTCTGTGATG+TGG 0.535503 5_4:-60310666 None:intergenic
CCAAATCTTCCTTCCTCCAA+TGG 0.535910 5_4:+60310720 Msa0861150:exon
CACATGAACAGAAAAGGGAC+AGG 0.536834 5_4:+60313390 Msa0861150:three_prime_UTR
GAGGTTGATGCTGATGGAAA+CGG 0.536879 5_4:+60313065 Msa0861150:CDS
CATCACAGTCCCGAGCTCCT+TGG 0.540354 5_4:-60312991 None:intergenic
GTATTACTACCAAGGAGCTC+GGG 0.541622 5_4:+60312982 Msa0861150:CDS
TTGGTTACCATTTATAAACA+TGG 0.542858 5_4:+60313627 Msa0861150:three_prime_UTR
CTGACTGCCATATCCAATGG+TGG 0.548374 5_4:+60313787 Msa0861150:three_prime_UTR
AGCTTTCCGTGTGTTTGACA+AGG 0.552785 5_4:+60313166 Msa0861150:CDS
ATGAAGTACAAATGCATGGT+GGG 0.554370 5_4:-60313591 None:intergenic
ATCAACGAGGTTGATGCTGA+TGG 0.559241 5_4:+60313059 Msa0861150:CDS
GGGACTGTGATGAGGTCGCT+AGG 0.561210 5_4:+60313002 Msa0861150:CDS
TCGGTGAGTTGATCGGCCAT+TGG 0.562102 5_4:-60310736 None:intergenic
TGTATTACTACCAAGGAGCT+CGG 0.565857 5_4:+60312981 Msa0861150:CDS
CTGCTCGTCGGTGAGTTGAT+CGG 0.574149 5_4:-60310743 None:intergenic
GTGAGTTGATCGGCCATTGG+AGG 0.576018 5_4:-60310733 None:intergenic
AAGGAATTCAGGGAAATCAA+TGG 0.581358 5_4:-60313090 None:intergenic
AAGTCATGATGGCTAAGTGA+AGG 0.584665 5_4:+60313333 Msa0861150:CDS
TGGTGCAACGAAACCACCAT+TGG 0.586684 5_4:-60313800 None:intergenic
AGGCTGATGTTGATGGTGAT+GGG 0.588891 5_4:+60313285 Msa0861150:CDS
TTCAGCCTATTCGATAAGGA+TGG 0.591776 5_4:+60310787 Msa0861150:CDS
TGATTCCGAGGAAGAGCTCA+AGG 0.592058 5_4:+60313142 Msa0861150:CDS
GGAGTTTGTCAAAGTCATGA+TGG 0.601225 5_4:+60313322 Msa0861150:CDS
GATGAAGGATACTGATTCCG+AGG 0.608389 5_4:+60313130 Msa0861150:CDS
GTTGATCGGCCATTGGAGGA+AGG 0.618554 5_4:-60310729 None:intergenic
TGATGGGCAGATCAACTATG+AGG 0.622339 5_4:+60313301 Msa0861150:CDS
CGAGATTTGTCATGACATGA+CGG 0.630044 5_4:-60313220 None:intergenic
CTTCATGACAGTGATTCAAG+AGG 0.634031 5_4:-60313739 None:intergenic
CTATTCGATAAGGATGGCGA+TGG 0.634576 5_4:+60310793 Msa0861150:CDS
AGTCATGATGGCTAAGTGAA+GGG 0.635660 5_4:+60313334 Msa0861150:exon
AGGAGCTCGGGACTGTGATG+AGG 0.639412 5_4:+60312994 Msa0861150:CDS
TTTGATCCTTGTCAAACACA+CGG 0.647181 5_4:-60313172 None:intergenic
AATGAAGTACAAATGCATGG+TGG 0.655561 5_4:-60313592 None:intergenic
TGCAGGTTGTATTACTACCA+AGG 0.662670 5_4:+60312974 Msa0861150:intron
AAACTCAGAGATCTGCTCGT+CGG 0.668704 5_4:-60310755 None:intergenic
GCTAGGCCAGAACCCAACTG+AGG 0.683758 5_4:+60313019 Msa0861150:CDS
AGTTGACGAGATGATTCGCG+AGG 0.696963 5_4:+60313265 Msa0861150:CDS
ACATGAACAGAAAAGGGACA+GGG 0.707638 5_4:+60313391 Msa0861150:three_prime_UTR
ATTGCAGGACATGATCAACG+AGG 0.813894 5_4:+60313046 Msa0861150:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAGCAAAAAAAATAAA+AGG - chr5_4:60310836-60310855 None:intergenic 10.0%
!! GAAAAAAAATTCATAAAAAT+TGG + chr5_4:60312226-60312245 Msa0861150:intron 10.0%
!!! ATTATTCTATTTTCATTATT+AGG + chr5_4:60313439-60313458 Msa0861150:three_prime_UTR 10.0%
!!! TTTTAGTTCTTTTTTTTCTA+TGG - chr5_4:60310587-60310606 None:intergenic 15.0%
!!! ACTTTTTTAGATTTGTTTTT+AGG + chr5_4:60310951-60310970 Msa0861150:intron 15.0%
!!! CTTTTTTAGATTTGTTTTTA+GGG + chr5_4:60310952-60310971 Msa0861150:intron 15.0%
!!! TGTTGTTTGATTTATATAAA+AGG + chr5_4:60311175-60311194 Msa0861150:intron 15.0%
!!! ATATAAAAGGATTGTTTTTT+TGG + chr5_4:60311188-60311207 Msa0861150:intron 15.0%
!!! AATTTTTTTTCAAAAGTATG+AGG - chr5_4:60312217-60312236 None:intergenic 15.0%
!! AATAACTCAATAATCAATAT+GGG + chr5_4:60312462-60312481 Msa0861150:intron 15.0%
!! TTGATATAACATGTAATATT+AGG + chr5_4:60312688-60312707 Msa0861150:intron 15.0%
!! TTATCAAAATTCCTTCAAAA+GGG - chr5_4:60310923-60310942 None:intergenic 20.0%
!! TTTATCAAAATTCCTTCAAA+AGG - chr5_4:60310924-60310943 None:intergenic 20.0%
!!! CGTAAGTTTTAATGTTTTTT+TGG + chr5_4:60311466-60311485 Msa0861150:intron 20.0%
!! TATAATACTATTAGCTAGAT+CGG - chr5_4:60311612-60311631 None:intergenic 20.0%
!! GTTATAATTCTGTTTATTGA+AGG + chr5_4:60312105-60312124 Msa0861150:intron 20.0%
!!! ATAAAAATTGGAACTTGTTT+AGG + chr5_4:60312238-60312257 Msa0861150:intron 20.0%
!! GAATAACTCAATAATCAATA+TGG + chr5_4:60312461-60312480 Msa0861150:intron 20.0%
!!! TGCTTTTCAAATTTTAGTTA+TGG - chr5_4:60313372-60313391 None:intergenic 20.0%
!!! TATTAGGACATGTTTTATTT+CGG + chr5_4:60313455-60313474 Msa0861150:three_prime_UTR 20.0%
!! TTATAAATGGTAACCAAAAA+AGG - chr5_4:60313624-60313643 None:intergenic 20.0%
!! AATTGTTCCATGTTTATAAA+TGG - chr5_4:60313637-60313656 None:intergenic 20.0%
! AATGTAAGAAGAAGAGAAAA+AGG - chr5_4:60310641-60310660 None:intergenic 25.0%
!!! GATGGTTTGTTTGATTTTTT+AGG + chr5_4:60311111-60311130 Msa0861150:intron 25.0%
!!! ATGAATTTTAGTTGCATGTT+TGG + chr5_4:60311213-60311232 Msa0861150:intron 25.0%
! TGATTGTGAATAACTCAATA+TGG + chr5_4:60311241-60311260 Msa0861150:intron 25.0%
!! GAAAACTATGTTTTCAATTG+CGG + chr5_4:60311533-60311552 Msa0861150:intron 25.0%
! AATACACATCAACAATGATA+CGG - chr5_4:60311670-60311689 None:intergenic 25.0%
! TATCATTGTTGATGTGTATT+TGG + chr5_4:60311670-60311689 Msa0861150:intron 25.0%
! GTTATCAATTGCAAAAATAG+CGG + chr5_4:60311846-60311865 Msa0861150:intron 25.0%
! TAGCATAGAAAAATTTGAAC+GGG - chr5_4:60311872-60311891 None:intergenic 25.0%
! GTAGCATAGAAAAATTTGAA+CGG - chr5_4:60311873-60311892 None:intergenic 25.0%
!!! AATAAACCGCTGTTTTTAAA+AGG - chr5_4:60312048-60312067 None:intergenic 25.0%
! AGCGGTTTATTAAAAGTTTA+TGG + chr5_4:60312057-60312076 Msa0861150:intron 25.0%
! TAATTCTGTTTATTGAAGGA+CGG + chr5_4:60312109-60312128 Msa0861150:intron 25.0%
!! TAGATGGTAACTATTTGTTA+TGG + chr5_4:60312569-60312588 Msa0861150:intron 25.0%
!! ATCTTATTGATTACTGTTGT+AGG + chr5_4:60312644-60312663 Msa0861150:intron 25.0%
! ATGAAAAACATCAAAACTCA+CGG - chr5_4:60312749-60312768 None:intergenic 25.0%
!! TTTTGTCATGTATGTCTTAT+AGG + chr5_4:60312909-60312928 Msa0861150:intron 25.0%
! TTTGTCATGTATGTCTTATA+GGG + chr5_4:60312910-60312929 Msa0861150:intron 25.0%
!!! ATTAGGACATGTTTTATTTC+GGG + chr5_4:60313456-60313475 Msa0861150:three_prime_UTR 25.0%
! ATCCAAACTACTTAAACAAA+GGG - chr5_4:60313562-60313581 None:intergenic 25.0%
! AATCCAAACTACTTAAACAA+AGG - chr5_4:60313563-60313582 None:intergenic 25.0%
! AAAAATGAAGTACAAATGCA+TGG - chr5_4:60313598-60313617 None:intergenic 25.0%
!!! CTTCATTTTTCTTCCTTTTT+TGG + chr5_4:60313608-60313627 Msa0861150:three_prime_UTR 25.0%
! TTGGTTACCATTTATAAACA+TGG + chr5_4:60313627-60313646 Msa0861150:three_prime_UTR 25.0%
! TTTGAGCTTCAAAAAAATCA+TGG - chr5_4:60313823-60313842 None:intergenic 25.0%
!!! AGTTTTGACAAAAATCATGA+TGG + chr5_4:60313848-60313867 Msa0861150:three_prime_UTR 25.0%
!! TTATGTCATGTGTTTTTGTG+TGG + chr5_4:60311089-60311108 Msa0861150:intron 30.0%
TATCCAAATACAGATCAACA+CGG - chr5_4:60311391-60311410 None:intergenic 30.0%
! ATGTTTTCAATTGCGGAAAA+TGG + chr5_4:60311540-60311559 Msa0861150:intron 30.0%
AGCACGTGTAAATTTGAAAA+AGG - chr5_4:60311568-60311587 None:intergenic 30.0%
!! CTGTGAGTTTTGATGTTTTA+AGG + chr5_4:60311772-60311791 Msa0861150:intron 30.0%
! CAAATTTTTCTATGCTACAG+TGG + chr5_4:60311875-60311894 Msa0861150:intron 30.0%
! AATTGGAACTTGTTTAGGTT+TGG + chr5_4:60312243-60312262 Msa0861150:intron 30.0%
AATAGTTACCATCTAATAGC+TGG - chr5_4:60312564-60312583 None:intergenic 30.0%
TGAAAAACATCAAAACTCAC+GGG - chr5_4:60312748-60312767 None:intergenic 30.0%
TTCTCAATTGCGAAAAATAG+CGG + chr5_4:60312816-60312835 Msa0861150:intron 30.0%
!! TCACTTGTTAAGGTTTTAAC+TGG + chr5_4:60312938-60312957 Msa0861150:intron 30.0%
! AAAAGCACATGAACAGAAAA+GGG + chr5_4:60313385-60313404 Msa0861150:three_prime_UTR 30.0%
!!! GTCATTAGTTTTTTGTTGGT+CGG + chr5_4:60313478-60313497 Msa0861150:three_prime_UTR 30.0%
! CAATTTGTGCTTTTACATGT+GGG + chr5_4:60313662-60313681 Msa0861150:three_prime_UTR 30.0%
ATTGACACAATAGCATAAGA+TGG - chr5_4:60313706-60313725 None:intergenic 30.0%
ATGAAGTTGAACGATTTCTT+AGG + chr5_4:60313756-60313775 Msa0861150:three_prime_UTR 30.0%
GAAGAGAAAAAGGAGGATTA+AGG - chr5_4:60310631-60310650 None:intergenic 35.0%
GTAAGAAGAAGAGAAAAAGG+AGG - chr5_4:60310638-60310657 None:intergenic 35.0%
!! TTCCTTCAAAAGGGTATCAT+GGG - chr5_4:60310914-60310933 None:intergenic 35.0%
!! ATTCCTTCAAAAGGGTATCA+TGG - chr5_4:60310915-60310934 None:intergenic 35.0%
!! AGGGTTCTTGTTTGACTTTT+TGG + chr5_4:60310971-60310990 Msa0861150:intron 35.0%
GACAAGAGTAAAACGTGAAA+TGG - chr5_4:60311038-60311057 None:intergenic 35.0%
!! ACCTGATTGCTATTTCATTC+TGG - chr5_4:60311292-60311311 None:intergenic 35.0%
! TATCCGTGTTGATCTGTATT+TGG + chr5_4:60311385-60311404 Msa0861150:intron 35.0%
ATTAGCTAGATCGGTACTAA+AGG - chr5_4:60311603-60311622 None:intergenic 35.0%
AAAACTCACAGTTGCATGAT+AGG - chr5_4:60311763-60311782 None:intergenic 35.0%
TTGTCAACTATTAGCTAGAG+TGG - chr5_4:60311916-60311935 None:intergenic 35.0%
ATACGCGATTTAGTAGTATG+CGG + chr5_4:60312022-60312041 Msa0861150:intron 35.0%
TTAATCAGATTAGCACGAAC+AGG - chr5_4:60312346-60312365 None:intergenic 35.0%
ATCCAAACACGTAACACTAA+GGG - chr5_4:60312437-60312456 None:intergenic 35.0%
AATCCAAACACGTAACACTA+AGG - chr5_4:60312438-60312457 None:intergenic 35.0%
!!! GCATTTTGGTCACTTTTTTG+TGG + chr5_4:60312518-60312537 Msa0861150:intron 35.0%
AGAATGAACCAGCTATTAGA+TGG + chr5_4:60312553-60312572 Msa0861150:intron 35.0%
TACTGTTGTAGGTGTGTATT+TGG + chr5_4:60312655-60312674 Msa0861150:intron 35.0%
ACTGTTGTAGGTGTGTATTT+GGG + chr5_4:60312656-60312675 Msa0861150:intron 35.0%
AAGGAATTCAGGGAAATCAA+TGG - chr5_4:60313093-60313112 None:intergenic 35.0%
AATCAGTATCCTTCATCTTG+CGG - chr5_4:60313127-60313146 None:intergenic 35.0%
TTTGATCCTTGTCAAACACA+CGG - chr5_4:60313175-60313194 None:intergenic 35.0%
GTGTTTGACAAGGATCAAAA+TGG + chr5_4:60313176-60313195 Msa0861150:CDS 35.0%
! GAAAAGCACATGAACAGAAA+AGG + chr5_4:60313384-60313403 Msa0861150:three_prime_UTR 35.0%
!!! TCGGGTCATTAGTTTTTTGT+TGG + chr5_4:60313474-60313493 Msa0861150:three_prime_UTR 35.0%
! GTCCCTTTGTTTAAGTAGTT+TGG + chr5_4:60313557-60313576 Msa0861150:three_prime_UTR 35.0%
ATGAAGTACAAATGCATGGT+GGG - chr5_4:60313594-60313613 None:intergenic 35.0%
AATGAAGTACAAATGCATGG+TGG - chr5_4:60313595-60313614 None:intergenic 35.0%
! GCAATTTGTGCTTTTACATG+TGG + chr5_4:60313661-60313680 Msa0861150:three_prime_UTR 35.0%
AGCTTTCAGCCTATTCGATA+AGG + chr5_4:60310783-60310802 Msa0861150:CDS 40.0%
TTCAGCCTATTCGATAAGGA+TGG + chr5_4:60310787-60310806 Msa0861150:CDS 40.0%
! AACCCATGATACCCTTTTGA+AGG + chr5_4:60310909-60310928 Msa0861150:intron 40.0%
!! GTCATGTGTTTTTGTGTGGA+TGG + chr5_4:60311093-60311112 Msa0861150:intron 40.0%
GCCAGAATGAAATAGCAATC+AGG + chr5_4:60311288-60311307 Msa0861150:intron 40.0%
TAGCAATCAGGTGTTTGTGA+TGG + chr5_4:60311300-60311319 Msa0861150:intron 40.0%
TGACTCATTACATTCGAGTC+AGG + chr5_4:60311439-60311458 Msa0861150:intron 40.0%
AGACAGCTTGATACGAGATT+TGG - chr5_4:60311949-60311968 None:intergenic 40.0%
!! GGCTTGTTAAAATGCTGTCT+TGG + chr5_4:60311981-60312000 Msa0861150:intron 40.0%
!! ATGCGGCCTTTTAAAAACAG+CGG + chr5_4:60312039-60312058 Msa0861150:intron 40.0%
!! TGTTGTGCTGTTGTGCATTT+TGG + chr5_4:60312504-60312523 Msa0861150:intron 40.0%
! TAGGGCTGAATCACTTGTTA+AGG + chr5_4:60312928-60312947 Msa0861150:intron 40.0%
TGCAGGTTGTATTACTACCA+AGG + chr5_4:60312974-60312993 Msa0861150:intron 40.0%
TGTATTACTACCAAGGAGCT+CGG + chr5_4:60312981-60313000 Msa0861150:CDS 40.0%
CCATCAGGTTAAGGAATTCA+GGG - chr5_4:60313103-60313122 None:intergenic 40.0%
ATCAGTATCCTTCATCTTGC+GGG - chr5_4:60313126-60313145 None:intergenic 40.0%
CGAGATTTGTCATGACATGA+CGG - chr5_4:60313223-60313242 None:intergenic 40.0%
CGTCATGTCATGACAAATCT+CGG + chr5_4:60313221-60313240 Msa0861150:CDS 40.0%
GGAGTTTGTCAAAGTCATGA+TGG + chr5_4:60313322-60313341 Msa0861150:CDS 40.0%
AAGTCATGATGGCTAAGTGA+AGG + chr5_4:60313333-60313352 Msa0861150:CDS 40.0%
AGTCATGATGGCTAAGTGAA+GGG + chr5_4:60313334-60313353 Msa0861150:exon 40.0%
ACATGAACAGAAAAGGGACA+GGG + chr5_4:60313391-60313410 Msa0861150:three_prime_UTR 40.0%
TACATGTGGGTGATTAGTAC+AGG + chr5_4:60313675-60313694 Msa0861150:three_prime_UTR 40.0%
CTTCATGACAGTGATTCAAG+AGG - chr5_4:60313742-60313761 None:intergenic 40.0%
AACGAAACCACCATTGGATA+TGG - chr5_4:60313797-60313816 None:intergenic 40.0%
TTGTGTGTGTGTCTGTGATG+TGG - chr5_4:60310669-60310688 None:intergenic 45.0%
CCATTGGAGGAAGGAAGATT+TGG - chr5_4:60310723-60310742 None:intergenic 45.0%
CCAAATCTTCCTTCCTCCAA+TGG + chr5_4:60310720-60310739 Msa0861150:exon 45.0%
AAACTCAGAGATCTGCTCGT+CGG - chr5_4:60310758-60310777 None:intergenic 45.0%
CGAGCAGATCTCTGAGTTTA+AGG + chr5_4:60310759-60310778 Msa0861150:CDS 45.0%
CATCGCCATCCTTATCGAAT+AGG - chr5_4:60310795-60310814 None:intergenic 45.0%
CTATTCGATAAGGATGGCGA+TGG + chr5_4:60310793-60310812 Msa0861150:CDS 45.0%
CAGGTGTTTGTGATGGCATT+TGG + chr5_4:60311307-60311326 Msa0861150:intron 45.0%
AAGCTGTCTTGCAACAACAG+CGG + chr5_4:60311960-60311979 Msa0861150:intron 45.0%
TGTTTATTGAAGGACGGCGA+CGG + chr5_4:60312115-60312134 Msa0861150:intron 45.0%
CAGATTAGCACGAACAGGAA+AGG - chr5_4:60312341-60312360 None:intergenic 45.0%
AAACACGTAACACTAAGGGC+AGG - chr5_4:60312433-60312452 None:intergenic 45.0%
TGCCCTTAGTGTTACGTGTT+TGG + chr5_4:60312432-60312451 Msa0861150:intron 45.0%
AGCACAACACAGACATGAAG+GGG - chr5_4:60312493-60312512 None:intergenic 45.0%
CAGCACAACACAGACATGAA+GGG - chr5_4:60312494-60312513 None:intergenic 45.0%
ACAGCACAACACAGACATGA+AGG - chr5_4:60312495-60312514 None:intergenic 45.0%
GTCATGTGTACATTCCTGTC+AGG + chr5_4:60312720-60312739 Msa0861150:intron 45.0%
GTATTACTACCAAGGAGCTC+GGG + chr5_4:60312982-60313001 Msa0861150:CDS 45.0%
ATTGCAGGACATGATCAACG+AGG + chr5_4:60313046-60313065 Msa0861150:CDS 45.0%
!! ATCAACGAGGTTGATGCTGA+TGG + chr5_4:60313059-60313078 Msa0861150:CDS 45.0%
!! GAGGTTGATGCTGATGGAAA+CGG + chr5_4:60313065-60313084 Msa0861150:CDS 45.0%
CCCTGAATTCCTTAACCTGA+TGG + chr5_4:60313100-60313119 Msa0861150:CDS 45.0%
GCCATCAGGTTAAGGAATTC+AGG - chr5_4:60313104-60313123 None:intergenic 45.0%
!! GATGAAGGATACTGATTCCG+AGG + chr5_4:60313130-60313149 Msa0861150:CDS 45.0%
AGCTTTCCGTGTGTTTGACA+AGG + chr5_4:60313166-60313185 Msa0861150:CDS 45.0%
!! AGGCTGATGTTGATGGTGAT+GGG + chr5_4:60313285-60313304 Msa0861150:CDS 45.0%
! TGATGGGCAGATCAACTATG+AGG + chr5_4:60313301-60313320 Msa0861150:CDS 45.0%
CACATGAACAGAAAAGGGAC+AGG + chr5_4:60313390-60313409 Msa0861150:three_prime_UTR 45.0%
CTTCTGACTGCCATATCCAA+TGG + chr5_4:60313784-60313803 Msa0861150:three_prime_UTR 45.0%
CTGGTTGCTCAAAATGCTGC+AGG + chr5_4:60312957-60312976 Msa0861150:intron 50.0%
ATTCAGCCTCAGTTGGGTTC+TGG - chr5_4:60313028-60313047 None:intergenic 50.0%
CCTGCAATTCAGCCTCAGTT+GGG - chr5_4:60313034-60313053 None:intergenic 50.0%
TCCTGCAATTCAGCCTCAGT+TGG - chr5_4:60313035-60313054 None:intergenic 50.0%
TGATTCCGAGGAAGAGCTCA+AGG + chr5_4:60313142-60313161 Msa0861150:CDS 50.0%
AGCTTCCTTGAGCTCTTCCT+CGG - chr5_4:60313150-60313169 None:intergenic 50.0%
AGTTGACGAGATGATTCGCG+AGG + chr5_4:60313265-60313284 Msa0861150:CDS 50.0%
ATTCGCGAGGCTGATGTTGA+TGG + chr5_4:60313278-60313297 Msa0861150:CDS 50.0%
!! GAGGCTGATGTTGATGGTGA+TGG + chr5_4:60313284-60313303 Msa0861150:CDS 50.0%
CTGACTGCCATATCCAATGG+TGG + chr5_4:60313787-60313806 Msa0861150:three_prime_UTR 50.0%
TGGTGCAACGAAACCACCAT+TGG - chr5_4:60313803-60313822 None:intergenic 50.0%
GTTGATCGGCCATTGGAGGA+AGG - chr5_4:60310732-60310751 None:intergenic 55.0%
!! GTGAGTTGATCGGCCATTGG+AGG - chr5_4:60310736-60310755 None:intergenic 55.0%
!! TCGGTGAGTTGATCGGCCAT+TGG - chr5_4:60310739-60310758 None:intergenic 55.0%
!! CTGCTCGTCGGTGAGTTGAT+CGG - chr5_4:60310746-60310765 None:intergenic 55.0%
AAAACTCACGGGAGCCTGAC+AGG - chr5_4:60312737-60312756 None:intergenic 55.0%
CCCAACTGAGGCTGAATTGC+AGG + chr5_4:60313031-60313050 Msa0861150:CDS 55.0%
TCTTGCGGGCCATCAGGTTA+AGG - chr5_4:60313112-60313131 None:intergenic 55.0%
CATCACAGTCCCGAGCTCCT+TGG - chr5_4:60312994-60313013 None:intergenic 60.0%
AGGAGCTCGGGACTGTGATG+AGG + chr5_4:60312994-60313013 Msa0861150:CDS 60.0%
GGGACTGTGATGAGGTCGCT+AGG + chr5_4:60313002-60313021 Msa0861150:CDS 60.0%
GCTAGGCCAGAACCCAACTG+AGG + chr5_4:60313019-60313038 Msa0861150:CDS 60.0%
CCTTCATCTTGCGGGCCATC+AGG - chr5_4:60313118-60313137 None:intergenic 60.0%
CCTGATGGCCCGCAAGATGA+AGG + chr5_4:60313115-60313134 Msa0861150:CDS 60.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 60310582 60313926 60310582 ID=Msa0861150;Name=Msa0861150
chr5_4 mRNA 60310582 60313926 60310582 ID=Msa0861150-mRNA-1;Parent=Msa0861150;Name=Msa0861150-mRNA-1;_AED=0.03;_eAED=0.03;_QI=157|1|1|1|1|1|2|574|149
chr5_4 exon 60310582 60310814 60310582 ID=Msa0861150-mRNA-1:exon:18610;Parent=Msa0861150-mRNA-1
chr5_4 exon 60312979 60313926 60312979 ID=Msa0861150-mRNA-1:exon:18611;Parent=Msa0861150-mRNA-1
chr5_4 five_prime_UTR 60310582 60310738 60310582 ID=Msa0861150-mRNA-1:five_prime_utr;Parent=Msa0861150-mRNA-1
chr5_4 CDS 60310739 60310814 60310739 ID=Msa0861150-mRNA-1:cds;Parent=Msa0861150-mRNA-1
chr5_4 CDS 60312979 60313352 60312979 ID=Msa0861150-mRNA-1:cds;Parent=Msa0861150-mRNA-1
chr5_4 three_prime_UTR 60313353 60313926 60313353 ID=Msa0861150-mRNA-1:three_prime_utr;Parent=Msa0861150-mRNA-1
Gene Sequence

>Msa0861150

ATGGCCGATCAACTCACCGACGAGCAGATCTCTGAGTTTAAGGAAGCTTTCAGCCTATTCGATAAGGATGGCGATGGTTGTATTACTACCAAGGAGCTCGGGACTGTGATGAGGTCGCTAGGCCAGAACCCAACTGAGGCTGAATTGCAGGACATGATCAACGAGGTTGATGCTGATGGAAACGGTACCATTGATTTCCCTGAATTCCTTAACCTGATGGCCCGCAAGATGAAGGATACTGATTCCGAGGAAGAGCTCAAGGAAGCTTTCCGTGTGTTTGACAAGGATCAAAATGGTTTCATCTCTGCAGCTGAGCTCCGTCATGTCATGACAAATCTCGGAGAGAAGCTGACTGATGAAGAAGTTGACGAGATGATTCGCGAGGCTGATGTTGATGGTGATGGGCAGATCAACTATGAGGAGTTTGTCAAAGTCATGATGGCTAAGTGA
Protein sequence

>Msa0861150

MADQLTDEQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK*