AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0861180

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0861180 MtrunA17_Chr5g0440861 99.638 276 1 0 1 276 108 383 0.0 571
Msa0861180 MtrunA17_Chr2g0290481 50.617 243 117 1 37 276 45 287 7.89e-81 245
Msa0861180 MtrunA17_Chr4g0076291 52.632 228 100 5 56 276 13 239 4.68e-69 213
Msa0861180 MtrunA17_Chr5g0448251 41.146 192 103 4 89 276 87 272 3.79e-38 135
Msa0861180 MtrunA17_Chr2g0327201 45.455 99 52 2 180 276 25 123 1.49e-20 85.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0861180 AT5G21170.1 62.069 290 89 4 1 276 1 283 6.95e-114 329
Msa0861180 AT5G21170.3 68.037 219 68 2 58 276 23 239 1.11e-108 314
Msa0861180 AT5G21170.2 52.484 322 105 5 1 276 1 320 3.99e-108 316
Msa0861180 AT2G28060.2 47.423 97 50 1 180 276 13 108 1.70e-22 90.1
Msa0861180 AT2G28060.4 47.423 97 50 1 180 276 13 108 1.70e-22 90.1
Msa0861180 AT2G28060.3 47.423 97 50 1 180 276 13 108 1.70e-22 90.1
Msa0861180 AT2G28060.1 47.423 97 50 1 180 276 13 108 1.70e-22 90.1

Find 111 sgRNAs with CRISPR-Local

Find 497 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAAACTCAGACACACTTTC+AGG 0.198492 5_4:+60343012 None:intergenic
GTTATGATCACTTGGAATTA+TGG 0.209238 5_4:-60344575 Msa0861180:CDS
CACTACTCCCATTGTTAACT+TGG 0.248380 5_4:+60342406 None:intergenic
CATCAGGTATATTTCATTAC+AGG 0.251464 5_4:-60344364 Msa0861180:CDS
TGGAGGGATCCTGGGATAAC+TGG 0.268823 5_4:-60344535 Msa0861180:CDS
GCAAGTAAACGACAACAATA+TGG 0.279520 5_4:-60349076 Msa0861180:exon
GATCTGACGCTGTGATGTTT+TGG 0.294431 5_4:+60349255 None:intergenic
GCTTGACCATAACTAGATTC+TGG 0.316796 5_4:+60342976 None:intergenic
TAATTCCAAGTGATCATAAC+AGG 0.345237 5_4:+60344578 None:intergenic
TTTACTTGCAATGTAGATAA+AGG 0.372874 5_4:+60349090 None:intergenic
GTGTGGCTGTGGAGGGATCC+TGG 0.375283 5_4:-60344544 Msa0861180:CDS
GAAGAAGAAGAAAACGGTTA+TGG 0.393677 5_4:+60349198 None:intergenic
CTAGAACGACGAGGACTTTG+AGG 0.403810 5_4:+60348934 None:intergenic
TGCATTAGTAGTGAAACTAT+TGG 0.409130 5_4:-60342374 Msa0861180:three_prime_UTR
TTTGCAAAGTCTTCCTCAGC+TGG 0.416645 5_4:+60342949 None:intergenic
CTTGACCATAACTAGATTCT+GGG 0.418244 5_4:+60342977 None:intergenic
TCTAGATCGCCGATCCTCTT+CGG 0.421408 5_4:-60348916 Msa0861180:CDS
TAGATATGCTCGAAAGAATC+TGG 0.423670 5_4:-60342603 Msa0861180:three_prime_UTR
GCCGATCCTCTTCGGTCCTC+AGG 0.427622 5_4:-60348908 Msa0861180:intron
CCCGACGCCGGCGATCCTTC+CGG 0.436756 5_4:-60349021 Msa0861180:CDS
CCGGAAGGATCGCCGGCGTC+GGG 0.437825 5_4:+60349021 None:intergenic
CAAACTCAGACACACTTTCA+GGG 0.439883 5_4:+60343013 None:intergenic
CAGCTGCATCTTACAGTCCT+AGG 0.454992 5_4:-60342904 Msa0861180:CDS
TTGCCATGGGAGTGACTCAC+AGG 0.457040 5_4:-60342786 Msa0861180:CDS
CAAGTAAACGACAACAATAT+GGG 0.457670 5_4:-60349075 Msa0861180:exon
TATAATCCCAAGTTAACAAT+GGG 0.458710 5_4:-60342413 Msa0861180:three_prime_UTR
TGCCACATTTGATTGAGAAA+AGG 0.464113 5_4:+60344647 None:intergenic
CCTGGGATAACTGGGCATCT+AGG 0.465084 5_4:-60344526 Msa0861180:intron
TAAATATGTGACAGTTGTCC+AGG 0.473403 5_4:-60342715 Msa0861180:three_prime_UTR
TGAAAGTGTGTCTGAGTTTG+AGG 0.478143 5_4:-60343010 Msa0861180:CDS
GGGCCGTTACCTCTTTGTAA+TGG 0.478902 5_4:+60344671 None:intergenic
CCCATCTCATCAGCTACATA+AGG 0.479081 5_4:+60344302 None:intergenic
ACCTCTTGAGAGGTTTGTAA+AGG 0.484885 5_4:+60342737 None:intergenic
CCCTCCCCAGAATCTAGTTA+TGG 0.487999 5_4:-60342982 Msa0861180:CDS
CCTTATGTAGCTGATGAGAT+GGG 0.495519 5_4:-60344302 Msa0861180:CDS
CTCAAAATCTGTTGTTGCCA+TGG 0.498636 5_4:-60342800 Msa0861180:CDS
ATTCTTATAGTCCTCCCATC+AGG 0.502622 5_4:-60344380 Msa0861180:CDS
TCAGCTACATAAGGAAGATC+CGG 0.505471 5_4:+60344311 None:intergenic
ACTACTCCCATTGTTAACTT+GGG 0.509104 5_4:+60342407 None:intergenic
AAGTAACTTCGTTCCTGTCA+TGG 0.511107 5_4:-60342452 Msa0861180:three_prime_UTR
AACAATATGGGAAACGCTAA+CGG 0.513258 5_4:-60349063 Msa0861180:exon
CGGTGAACAAAGATATATTC+CGG 0.513496 5_4:-60344330 Msa0861180:CDS
TGTGGCTGTGGAGGGATCCT+GGG 0.513789 5_4:-60344543 Msa0861180:CDS
GGAGGGATCCTGGGATAACT+GGG 0.514253 5_4:-60344534 Msa0861180:CDS
CAATTATTAAAATTTCAGTA+AGG 0.520369 5_4:-60342506 Msa0861180:three_prime_UTR
ACCGGAAGGATCGCCGGCGT+CGG 0.520401 5_4:+60349020 None:intergenic
ACCTGAGGACCGAAGAGGAT+CGG 0.523080 5_4:+60348907 None:intergenic
GGTATTGCAGCGAGGTGGCA+AGG 0.529058 5_4:-60344411 Msa0861180:CDS
CACATTTGATTGAGAAAAGG+AGG 0.534271 5_4:+60344650 None:intergenic
TTCACGACCGGAAGGATCGC+CGG 0.535512 5_4:+60349014 None:intergenic
TCCTTATGTAGCTGATGAGA+TGG 0.535986 5_4:-60344303 Msa0861180:CDS
AGCTGCGAAGGAACAGCCAT+TGG 0.538490 5_4:+60342922 None:intergenic
CGGACTATTAGCCATTGAAT+CGG 0.539365 5_4:+60348957 None:intergenic
AACGCTAACGGAAGAGAAGA+CGG 0.542108 5_4:-60349051 Msa0861180:CDS
TCAAAATCTGTTGTTGCCAT+GGG 0.544837 5_4:-60342799 Msa0861180:CDS
CTGTAATGAAATATACCTGA+TGG 0.547195 5_4:+60344365 None:intergenic
TGGAGGTAACAGTGTGGCTG+TGG 0.550105 5_4:-60344555 Msa0861180:CDS
GAATCCCTGTTATGATCACT+TGG 0.552743 5_4:-60344583 Msa0861180:CDS
CGAATAGGAGGTGGCGCGTG+AGG 0.554867 5_4:+60348991 None:intergenic
ATAACAGGGATTCCTTGCTC+AGG 0.559506 5_4:+60344593 None:intergenic
CATTACAGGTTCATTGTCGA+CGG 0.559694 5_4:-60344350 Msa0861180:CDS
CAACTGTCACATATTTCGAC+TGG 0.562286 5_4:+60342761 None:intergenic
GGTAACAGTGTGGCTGTGGA+GGG 0.563941 5_4:-60344551 Msa0861180:CDS
TCCTTTACAAACCTCTCAAG+AGG 0.566470 5_4:-60342738 Msa0861180:CDS
CCTCCGTAGGTGGTATGTGA+AGG 0.571498 5_4:-60342637 Msa0861180:three_prime_UTR
ACTGTAAGATGCAGCTGCGA+AGG 0.575116 5_4:+60342910 None:intergenic
CCTCTTTGTAATGGAGCTAG+AGG 0.578932 5_4:+60344680 None:intergenic
CATCAGCATTCTCCATGCCT+AGG 0.580187 5_4:+60342887 None:intergenic
ACATGTTGAGGCTTTGAAGA+GGG 0.581687 5_4:+60342859 None:intergenic
GTTAATCAAGCTCCTGAGCA+AGG 0.584602 5_4:-60344605 Msa0861180:CDS
TTATAATCCCAAGTTAACAA+TGG 0.585991 5_4:-60342414 Msa0861180:three_prime_UTR
AGGTAACAGTGTGGCTGTGG+AGG 0.586001 5_4:-60344552 Msa0861180:CDS
TGTAATGAAATATACCTGAT+GGG 0.586361 5_4:+60344366 None:intergenic
AGACTTTGCAAAAGAGCCAA+TGG 0.589225 5_4:-60342938 Msa0861180:CDS
TGATTTAGCACAACATGTTG+AGG 0.589623 5_4:+60342847 None:intergenic
CAAATAATACTCCCCTCCGT+AGG 0.590190 5_4:-60342650 Msa0861180:three_prime_UTR
GACGGAGCTATTCCCGACGC+CGG 0.592151 5_4:-60349033 Msa0861180:CDS
CCTAGATGCCCAGTTATCCC+AGG 0.593659 5_4:+60344526 None:intergenic
ATAATACTCCCCTCCGTAGG+TGG 0.598365 5_4:-60342647 Msa0861180:three_prime_UTR
TCACATATTTACCTCTTGAG+AGG 0.598865 5_4:+60342727 None:intergenic
GCATCTTACAGTCCTAGGCA+TGG 0.612059 5_4:-60342899 Msa0861180:CDS
CCATAACTAGATTCTGGGGA+GGG 0.614018 5_4:+60342982 None:intergenic
AGACCTTCACATACCACCTA+CGG 0.618327 5_4:+60342634 None:intergenic
GCTCCATTACAAAGAGGTAA+CGG 0.620004 5_4:-60344674 Msa0861180:CDS
AACATGTTGAGGCTTTGAAG+AGG 0.620499 5_4:+60342858 None:intergenic
ATGATCACTTGGAATTATGG+AGG 0.622429 5_4:-60344572 Msa0861180:CDS
TGGCGCGTGAGGTTCACGAC+CGG 0.625510 5_4:+60349002 None:intergenic
ATGTGGCAGAATGAGCCTCA+TGG 0.626254 5_4:-60344632 Msa0861180:CDS
CCTCTAGCTCCATTACAAAG+AGG 0.626799 5_4:-60344680 Msa0861180:CDS
TAACTAGATTCTGGGGAGGG+TGG 0.630608 5_4:+60342985 None:intergenic
GGCATGGAGAATGCTGATGT+CGG 0.632107 5_4:-60342883 Msa0861180:CDS
GCGTGAGGTTCACGACCGGA+AGG 0.633347 5_4:+60349006 None:intergenic
ACATTTGATTGAGAAAAGGA+GGG 0.635035 5_4:+60344651 None:intergenic
CTTATGTAGCTGATGAGATG+GGG 0.635358 5_4:-60344301 Msa0861180:CDS
TTCACATACCACCTACGGAG+GGG 0.649511 5_4:+60342639 None:intergenic
GAACCTGTGAGTCACTCCCA+TGG 0.651519 5_4:+60342783 None:intergenic
AGGTGCCTAAAATTTGATGT+CGG 0.653326 5_4:-60342486 Msa0861180:three_prime_UTR
ACCATAACTAGATTCTGGGG+AGG 0.658558 5_4:+60342981 None:intergenic
TGGTCAAGCATATCCAGCTG+AGG 0.675215 5_4:-60342962 Msa0861180:CDS
GAACGACGAGGACTTTGAGG+CGG 0.686219 5_4:+60348937 None:intergenic
CTTCACATACCACCTACGGA+GGG 0.686834 5_4:+60342638 None:intergenic
TGCAGGAAGGTATTGCAGCG+AGG 0.689831 5_4:-60344419 Msa0861180:intron
CCTTCACATACCACCTACGG+AGG 0.691281 5_4:+60342637 None:intergenic
AGCGAACCTGAGGACCGAAG+AGG 0.695965 5_4:+60348902 None:intergenic
AGGAAGGTATTGCAGCGAGG+TGG 0.696393 5_4:-60344416 Msa0861180:CDS
TTGACCATAACTAGATTCTG+GGG 0.696722 5_4:+60342978 None:intergenic
AATTCCAAGTGATCATAACA+GGG 0.702266 5_4:+60344579 None:intergenic
AATGAAATATACCTGATGGG+AGG 0.706670 5_4:+60344369 None:intergenic
GCTTGATTAACAATACCATG+AGG 0.767552 5_4:+60344617 None:intergenic
ATCGGCGATCTAGAACGACG+AGG 0.792554 5_4:+60348925 None:intergenic
GAATTATGGAGGTAACAGTG+TGG 0.820985 5_4:-60344561 Msa0861180:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AACCTTTTTTTATATTTTTT+TGG - chr5_4:60345427-60345446 Msa0861180:intron 10.0%
!!! GAAATTTTAATAATTGTAAA+AGG + chr5_4:60349105-60349124 None:intergenic 10.0%
!! GAATTAAATTAAATGCTAAT+AGG - chr5_4:60342919-60342938 Msa0861180:CDS 15.0%
!!! TATTTAAGATTGAAATGTTT+TGG + chr5_4:60344969-60344988 None:intergenic 15.0%
!! AGCCAAAAAAATATAAAAAA+AGG + chr5_4:60345432-60345451 None:intergenic 15.0%
!!! AATAGTTCTAAAATGTTTAT+AGG + chr5_4:60345763-60345782 None:intergenic 15.0%
!! CAGACAAAATAAATATTAAT+TGG + chr5_4:60346139-60346158 None:intergenic 15.0%
!!! TCTGAAAAGTATATTTTTTT+GGG - chr5_4:60346155-60346174 Msa0861180:intron 15.0%
!!! ATAATGAATAAATTTTCATC+AGG - chr5_4:60346194-60346213 Msa0861180:intron 15.0%
!!! GTTTTCATAAAATTTGAAAA+TGG + chr5_4:60346227-60346246 None:intergenic 15.0%
!! CATAATTAAAAACTAAACAT+AGG - chr5_4:60346890-60346909 Msa0861180:intron 15.0%
!! AATTTCATTTCATAATGAAA+AGG + chr5_4:60347434-60347453 None:intergenic 15.0%
!! AAACATTTATTACAATTACA+AGG + chr5_4:60348423-60348442 None:intergenic 15.0%
!!! ACAAATCATTTTCATTAAAT+GGG + chr5_4:60348528-60348547 None:intergenic 15.0%
!! CAATTATTAAAATTTCAGTA+AGG - chr5_4:60349109-60349128 Msa0861180:five_prime_UTR 15.0%
!!! TTTTCTGAATTTTTGTTATG+CGG - chr5_4:60342774-60342793 Msa0861180:CDS 20.0%
!! GATTATTCTGTTTGTTTAAT+TGG - chr5_4:60342989-60343008 Msa0861180:CDS 20.0%
!! AATAATCTACAGTTTAAACT+TGG + chr5_4:60343121-60343140 None:intergenic 20.0%
!!! TTATTTATTGATTGATCGAT+TGG - chr5_4:60343181-60343200 Msa0861180:intron 20.0%
!! TTTCAAAATGAATTAATGTG+TGG - chr5_4:60343249-60343268 Msa0861180:intron 20.0%
!!! TTAATAATGCAATCTCATTT+TGG - chr5_4:60343450-60343469 Msa0861180:intron 20.0%
!! TTTACAAGACAAAAATTATG+TGG + chr5_4:60343758-60343777 None:intergenic 20.0%
!! AATTAATGTGAATTTCGAAA+TGG + chr5_4:60343853-60343872 None:intergenic 20.0%
!! TTACAATTATACACAACATA+TGG + chr5_4:60344012-60344031 None:intergenic 20.0%
!!! TTTTTTACCCTTTCATATAT+AGG - chr5_4:60344809-60344828 Msa0861180:intron 20.0%
!! AAAAAAAAACCATCAATATG+TGG - chr5_4:60344906-60344925 Msa0861180:intron 20.0%
!! TTCAATCTTAAATAAAAGAG+TGG - chr5_4:60344975-60344994 Msa0861180:intron 20.0%
!! TATAATAAGAAAATGCTATG+AGG + chr5_4:60345005-60345024 None:intergenic 20.0%
!! ATTTAAATGTGTCATGATTA+GGG + chr5_4:60345056-60345075 None:intergenic 20.0%
!! AATTTAAATGTGTCATGATT+AGG + chr5_4:60345057-60345076 None:intergenic 20.0%
!!! ATTGAAAAGAAGAGATTTTT+GGG + chr5_4:60345265-60345284 None:intergenic 20.0%
!!! TATTGAAAAGAAGAGATTTT+TGG + chr5_4:60345266-60345285 None:intergenic 20.0%
!!! AAAAATCTCTTCTTTTCAAT+AGG - chr5_4:60345265-60345284 Msa0861180:intron 20.0%
!! TTTAAATTTACAGAACTAGT+TGG + chr5_4:60345527-60345546 None:intergenic 20.0%
!! GAAAGATTATAATTTCAGAA+TGG + chr5_4:60345856-60345875 None:intergenic 20.0%
!!! GTCTGAAAAGTATATTTTTT+TGG - chr5_4:60346154-60346173 Msa0861180:intron 20.0%
!!! CTGAAAAGTATATTTTTTTG+GGG - chr5_4:60346156-60346175 Msa0861180:intron 20.0%
!!! TGAAAAGTATATTTTTTTGG+GGG - chr5_4:60346157-60346176 Msa0861180:intron 20.0%
!!! CCAAGGATTAAATATATTTT+TGG + chr5_4:60346249-60346268 None:intergenic 20.0%
!! CCAAAAATATATTTAATCCT+TGG - chr5_4:60346246-60346265 Msa0861180:intron 20.0%
!! TTATAATATAAGATCGCAAA+AGG + chr5_4:60346680-60346699 None:intergenic 20.0%
!!! AGAGTCAACTTTTATTTATA+AGG - chr5_4:60346730-60346749 Msa0861180:intron 20.0%
!!! GAGTCAACTTTTATTTATAA+GGG - chr5_4:60346731-60346750 Msa0861180:intron 20.0%
!! AATAAATATGCAGGTAATAT+CGG - chr5_4:60346856-60346875 Msa0861180:intron 20.0%
!!! GGTTAATTTTAATTATTTGC+AGG - chr5_4:60347179-60347198 Msa0861180:intron 20.0%
!!! AATTTTAATTATTTGCAGGA+AGG - chr5_4:60347183-60347202 Msa0861180:intron 20.0%
!! AGATGAAAAATTCACAAAAA+AGG + chr5_4:60347378-60347397 None:intergenic 20.0%
!!! TTTTTTCTTCTTCTTTTCTT+TGG - chr5_4:60347737-60347756 Msa0861180:intron 20.0%
!!! TTTTTCTTCTTCTTTTCTTT+GGG - chr5_4:60347738-60347757 Msa0861180:intron 20.0%
!!! ATTGTTTTTTATGTCATATG+TGG - chr5_4:60347807-60347826 Msa0861180:intron 20.0%
!!! CAAATCATTTTCATTAAATG+GGG + chr5_4:60348527-60348546 None:intergenic 20.0%
!!! GACAAATCATTTTCATTAAA+TGG + chr5_4:60348529-60348548 None:intergenic 20.0%
!! AAGAACATCAAATCATTAAA+TGG + chr5_4:60348554-60348573 None:intergenic 20.0%
! AAAGAAGAAGAAGAAGAAAA+CGG + chr5_4:60342426-60342445 None:intergenic 25.0%
! TTTACTTGCAATGTAGATAA+AGG + chr5_4:60342528-60342547 None:intergenic 25.0%
! TATTCTGTTTGTTTAATTGG+TGG - chr5_4:60342992-60343011 Msa0861180:CDS 25.0%
! AATCAATCAATAACAGAATC+TGG + chr5_4:60343022-60343041 None:intergenic 25.0%
!!! TATAGTTGATGAATGTGATT+TGG - chr5_4:60343070-60343089 Msa0861180:intron 25.0%
!! AATGTGATTTGGATTGAATT+AGG - chr5_4:60343081-60343100 Msa0861180:intron 25.0%
! TACGTGTGTGTTAAATTAAA+CGG - chr5_4:60343140-60343159 Msa0861180:intron 25.0%
!!! TGTTTGAAGATTTTGAAGAA+CGG - chr5_4:60343376-60343395 Msa0861180:intron 25.0%
!!! TGTTTGTTTTCAAGTTAAAC+AGG + chr5_4:60343622-60343641 None:intergenic 25.0%
!!! TGTTTAACTTGAAAACAAAC+AGG - chr5_4:60343621-60343640 Msa0861180:intron 25.0%
!!! TGTTTGTTTTCAAGTTCAAT+AGG + chr5_4:60343671-60343690 None:intergenic 25.0%
! GAAATTCACATTAATTGTTC+TGG - chr5_4:60343857-60343876 Msa0861180:intron 25.0%
!! TTTTGCAGAAACCATTTTAT+AGG - chr5_4:60344131-60344150 Msa0861180:intron 25.0%
! ATAGTGTTTCACCTATAAAA+TGG + chr5_4:60344145-60344164 None:intergenic 25.0%
!! ATTTTATAGGTGAAACACTA+TGG - chr5_4:60344144-60344163 Msa0861180:intron 25.0%
! AAATCAATGGGATCAATATA+AGG + chr5_4:60344491-60344510 None:intergenic 25.0%
!! TTATATTGATCCCATTGATT+TGG - chr5_4:60344490-60344509 Msa0861180:intron 25.0%
!!! CTTTTAAAATTTACTGGACA+TGG + chr5_4:60344661-60344680 None:intergenic 25.0%
!!! TCTGGTCTTTTAAAATTTAC+TGG + chr5_4:60344667-60344686 None:intergenic 25.0%
! ATTCACCTAAAATTTACAGA+AGG + chr5_4:60344743-60344762 None:intergenic 25.0%
!!! TTCTGTAAATTTTAGGTGAA+TGG - chr5_4:60344742-60344761 Msa0861180:intron 25.0%
! AAACTTGCCTATATATGAAA+GGG + chr5_4:60344819-60344838 None:intergenic 25.0%
! AAAACTTGCCTATATATGAA+AGG + chr5_4:60344820-60344839 None:intergenic 25.0%
!!! CTGACTAGGAAATTATTTTT+CGG + chr5_4:60344884-60344903 None:intergenic 25.0%
!!! TGGTTTTTTTTTTACTGACT+AGG + chr5_4:60344898-60344917 None:intergenic 25.0%
! TTGGAAAACAATTTCCATAA+TGG + chr5_4:60344950-60344969 None:intergenic 25.0%
! TATTCCAACAACTTTGTATT+TGG - chr5_4:60345030-60345049 Msa0861180:intron 25.0%
!!! TCATGAAATCTAACTTGTTT+TGG + chr5_4:60345166-60345185 None:intergenic 25.0%
!! TGTTGTAATTTAAAGCTAAG+TGG + chr5_4:60345485-60345504 None:intergenic 25.0%
!!! TTTCATCAGTATTTTAGAAG+GGG + chr5_4:60345584-60345603 None:intergenic 25.0%
!!! GTTTCATCAGTATTTTAGAA+GGG + chr5_4:60345585-60345604 None:intergenic 25.0%
!!! AGTTTCATCAGTATTTTAGA+AGG + chr5_4:60345586-60345605 None:intergenic 25.0%
!!! ACATTTTAGAACTATTCACT+AGG - chr5_4:60345767-60345786 Msa0861180:intron 25.0%
! TATTCACTAGGTTTGAATAA+TGG - chr5_4:60345779-60345798 Msa0861180:intron 25.0%
! AATTTCATATACACAGATGA+TGG - chr5_4:60346306-60346325 Msa0861180:intron 25.0%
! AAGAGAAGATAAAGAAAATG+AGG - chr5_4:60346382-60346401 Msa0861180:intron 25.0%
! AGAGAAGATAAAGAAAATGA+GGG - chr5_4:60346383-60346402 Msa0861180:intron 25.0%
!!! AAATGTAGACTTGATAGTTT+TGG - chr5_4:60346496-60346515 Msa0861180:intron 25.0%
!!! AATGTAGACTTGATAGTTTT+GGG - chr5_4:60346497-60346516 Msa0861180:intron 25.0%
!! AAAAACAAGTTGAAACTTCA+GGG + chr5_4:60346808-60346827 None:intergenic 25.0%
!! TAAAAACAAGTTGAAACTTC+AGG + chr5_4:60346809-60346828 None:intergenic 25.0%
!!! ACTGTCTTTTCTTTTTGTTT+AGG - chr5_4:60346832-60346851 Msa0861180:intron 25.0%
! TGTTTAGGAAATAAATATGC+AGG - chr5_4:60346847-60346866 Msa0861180:intron 25.0%
! TGTAATGAAATATACCTGAT+GGG + chr5_4:60347252-60347271 None:intergenic 25.0%
!!! CAAAATATTTTAGCGTGTTT+TGG + chr5_4:60347577-60347596 None:intergenic 25.0%
!! CAAAACACGCTAAAATATTT+TGG - chr5_4:60347575-60347594 Msa0861180:intron 25.0%
!! TTTTCTTCTTCTTTTCTTTG+GGG - chr5_4:60347739-60347758 Msa0861180:intron 25.0%
! AATATAGACTGAGGAAATAT+TGG - chr5_4:60347842-60347861 Msa0861180:intron 25.0%
!! TGGTTTATTTACTTGAGTTT+TGG - chr5_4:60347882-60347901 Msa0861180:intron 25.0%
!! TTTGAAGTTGTTAATCAGTA+AGG - chr5_4:60348025-60348044 Msa0861180:intron 25.0%
! TTGATTGTTTGATTATGATG+AGG - chr5_4:60348492-60348511 Msa0861180:intron 25.0%
! TGTCTTCATAGAGAAAAATA+TGG - chr5_4:60348791-60348810 Msa0861180:intron 25.0%
! ACAAAATAAAAACAACAACC+TGG + chr5_4:60348921-60348940 None:intergenic 25.0%
!! CATCAAAACTTTCAGATTTT+TGG - chr5_4:60349056-60349075 Msa0861180:CDS 25.0%
! TTATAATCCCAAGTTAACAA+TGG - chr5_4:60349201-60349220 Msa0861180:five_prime_UTR 25.0%
! TATAATCCCAAGTTAACAAT+GGG - chr5_4:60349202-60349221 Msa0861180:five_prime_UTR 25.0%
CAAGTAAACGACAACAATAT+GGG - chr5_4:60342540-60342559 Msa0861180:three_prime_UTR 30.0%
AAATGAAATAACGAAGAACG+AGG + chr5_4:60342749-60342768 None:intergenic 30.0%
! AGGTAATTTTGTTGAAACTG+TGG - chr5_4:60342939-60342958 Msa0861180:CDS 30.0%
! TTTTGGACATACAAATCACA+TGG + chr5_4:60343282-60343301 None:intergenic 30.0%
TGTCCAAAACTTGATTAGAT+AGG - chr5_4:60343293-60343312 Msa0861180:intron 30.0%
GTCCAAAACTTGATTAGATA+GGG - chr5_4:60343294-60343313 Msa0861180:intron 30.0%
! TTCCCTATCTAATCAAGTTT+TGG + chr5_4:60343299-60343318 None:intergenic 30.0%
GAGATTGCATTATTAATGCA+AGG + chr5_4:60343446-60343465 None:intergenic 30.0%
TTTACCAAACTTACTAACGT+AGG - chr5_4:60343494-60343513 Msa0861180:intron 30.0%
TTACCAAACTTACTAACGTA+GGG - chr5_4:60343495-60343514 Msa0861180:intron 30.0%
! GATTTCTTGTTTATGGTCAA+CGG + chr5_4:60343584-60343603 None:intergenic 30.0%
! TTTTTGTCTTGTAAAACACG+TGG - chr5_4:60343763-60343782 Msa0861180:intron 30.0%
ACGCTACATATACAATTATC+TGG + chr5_4:60343826-60343845 None:intergenic 30.0%
CATTAATTGTTCTGGTCTAA+CGG - chr5_4:60343865-60343884 Msa0861180:intron 30.0%
ACAATTTACACACTTGATCA+AGG + chr5_4:60343946-60343965 None:intergenic 30.0%
AAATTGTGAAATGAGCTGTT+TGG - chr5_4:60343959-60343978 Msa0861180:intron 30.0%
AGAAATAACACATGCAGTAT+TGG - chr5_4:60344243-60344262 Msa0861180:intron 30.0%
TTACGAAATCCAAAATTGCT+AGG + chr5_4:60344303-60344322 None:intergenic 30.0%
TGCACAAAAAATCTTGTATG+CGG - chr5_4:60344346-60344365 Msa0861180:CDS 30.0%
TGAGCAATTTCCAAATCAAT+GGG + chr5_4:60344503-60344522 None:intergenic 30.0%
ATGAGCAATTTCCAAATCAA+TGG + chr5_4:60344504-60344523 None:intergenic 30.0%
ATAATGACCAGGAATAAAGA+TGG + chr5_4:60344529-60344548 None:intergenic 30.0%
CTTTATTCCTGGTCATTATT+TGG - chr5_4:60344530-60344549 Msa0861180:CDS 30.0%
GAAAATTCCAAATAATGACC+AGG + chr5_4:60344540-60344559 None:intergenic 30.0%
! CCAAACAAAACATTTTCTCT+CGG + chr5_4:60344589-60344608 None:intergenic 30.0%
!! AAGTTGATAAAATACGAGTC+TGG + chr5_4:60344685-60344704 None:intergenic 30.0%
! TACTGCCTTCTGTAAATTTT+AGG - chr5_4:60344735-60344754 Msa0861180:intron 30.0%
GTGCACAATTTCATTTAACA+TGG - chr5_4:60344768-60344787 Msa0861180:intron 30.0%
! ATATATAGGCAAGTTTTCCT+TGG - chr5_4:60344823-60344842 Msa0861180:intron 30.0%
!! AGTCATTTTCCACATATTGA+TGG + chr5_4:60344918-60344937 None:intergenic 30.0%
TGACTGTTTATCTTCCATTA+TGG - chr5_4:60344933-60344952 Msa0861180:intron 30.0%
GTCAATTGAATTGAATCATG+AGG + chr5_4:60345089-60345108 None:intergenic 30.0%
TGACTATTTGATTCCAAATC+TGG - chr5_4:60345122-60345141 Msa0861180:intron 30.0%
AACTATCATGTTTCCAGATT+TGG + chr5_4:60345138-60345157 None:intergenic 30.0%
!!! GAAATCTAACTTGTTTTGGA+GGG + chr5_4:60345162-60345181 None:intergenic 30.0%
!!! TGAAATCTAACTTGTTTTGG+AGG + chr5_4:60345163-60345182 None:intergenic 30.0%
! TGGTTATATTTTCATGAGTG+TGG - chr5_4:60345689-60345708 Msa0861180:intron 30.0%
! GGTTATATTTTCATGAGTGT+GGG - chr5_4:60345690-60345709 Msa0861180:intron 30.0%
! TGAGCAATCATGTCATTTAA+TGG + chr5_4:60345921-60345940 None:intergenic 30.0%
! ATGATGATATGCTTGTTGAT+AGG - chr5_4:60346005-60346024 Msa0861180:intron 30.0%
! ATAGGTTTGCTTAAATTGCT+GGG - chr5_4:60346023-60346042 Msa0861180:intron 30.0%
ATTTAATCCTTGGTTTCATC+TGG - chr5_4:60346256-60346275 Msa0861180:intron 30.0%
TTTAATCCTTGGTTTCATCT+GGG - chr5_4:60346257-60346276 Msa0861180:intron 30.0%
TGTTCTCATTATTCTGTTCT+GGG + chr5_4:60346334-60346353 None:intergenic 30.0%
TTGTTCTCATTATTCTGTTC+TGG + chr5_4:60346335-60346354 None:intergenic 30.0%
TCTTAGATTGTTAAGAGGAA+GGG - chr5_4:60346440-60346459 Msa0861180:intron 30.0%
GCAACATTTGCTTAAATCAA+AGG + chr5_4:60346570-60346589 None:intergenic 30.0%
!!! GATAGATCTCAGGTTTTTTT+TGG - chr5_4:60346609-60346628 Msa0861180:intron 30.0%
TTGTTCTGTAACAATAGTTG+AGG - chr5_4:60346635-60346654 Msa0861180:intron 30.0%
! GTTGAGGCTGAAATTAATTT+TGG - chr5_4:60346651-60346670 Msa0861180:intron 30.0%
TCTACAAGTCTAAACTTACA+AGG + chr5_4:60346713-60346732 None:intergenic 30.0%
! AGGATTTCTTTGTACTTTTC+AGG - chr5_4:60346910-60346929 Msa0861180:intron 30.0%
ACATTTGATTGAGAAAAGGA+GGG + chr5_4:60346967-60346986 None:intergenic 30.0%
AATTCCAAGTGATCATAACA+GGG + chr5_4:60347039-60347058 None:intergenic 30.0%
TAATTCCAAGTGATCATAAC+AGG + chr5_4:60347040-60347059 None:intergenic 30.0%
GTTATGATCACTTGGAATTA+TGG - chr5_4:60347040-60347059 Msa0861180:intron 30.0%
TGACATGAAAAGTTAGCAAT+CGG - chr5_4:60347158-60347177 Msa0861180:intron 30.0%
CTGTAATGAAATATACCTGA+TGG + chr5_4:60347253-60347272 None:intergenic 30.0%
CATCAGGTATATTTCATTAC+AGG - chr5_4:60347251-60347270 Msa0861180:intron 30.0%
TTTATAATCCGAACTGCATA+GGG + chr5_4:60347522-60347541 None:intergenic 30.0%
! TTTTATAATCCGAACTGCAT+AGG + chr5_4:60347523-60347542 None:intergenic 30.0%
TTCGGATTATAAAATCCGAA+CGG - chr5_4:60347529-60347548 Msa0861180:intron 30.0%
!!! GTGTTTTGGAGGATTTTATA+GGG + chr5_4:60347563-60347582 None:intergenic 30.0%
!!! AATATTTTAGCGTGTTTTGG+AGG + chr5_4:60347574-60347593 None:intergenic 30.0%
ATTTCATCACATTAATGCTC+TGG + chr5_4:60347943-60347962 None:intergenic 30.0%
! ATGGAAAGAATATGGACTTT+TGG - chr5_4:60348108-60348127 Msa0861180:intron 30.0%
! TGGAAAGAATATGGACTTTT+GGG - chr5_4:60348109-60348128 Msa0861180:intron 30.0%
!!! TTTGGAGGGTTTAGTTTTAT+TGG - chr5_4:60348142-60348161 Msa0861180:intron 30.0%
!!! TTGGAGGGTTTAGTTTTATT+GGG - chr5_4:60348143-60348162 Msa0861180:intron 30.0%
! AAAAGTTGTATTGGAGGTTT+TGG - chr5_4:60348173-60348192 Msa0861180:intron 30.0%
CAAACAATCAAAAGCAATCA+TGG + chr5_4:60348483-60348502 None:intergenic 30.0%
!!! TTGATGTTCTTGTTTTTTGC+AGG - chr5_4:60348563-60348582 Msa0861180:intron 30.0%
!!! GAACATTTTTTTACAGACTG+AGG + chr5_4:60348946-60348965 None:intergenic 30.0%
CAAAAAAACATAACCATGAC+AGG + chr5_4:60349179-60349198 None:intergenic 30.0%
!!! CTGTCATGGTTATGTTTTTT+TGG - chr5_4:60349177-60349196 Msa0861180:five_prime_UTR 30.0%
TGCATTAGTAGTGAAACTAT+TGG - chr5_4:60349241-60349260 Msa0861180:five_prime_UTR 30.0%
GAAGAAGAAGAAAACGGTTA+TGG + chr5_4:60342420-60342439 None:intergenic 35.0%
GCAAGTAAACGACAACAATA+TGG - chr5_4:60342539-60342558 Msa0861180:three_prime_UTR 35.0%
AACAATATGGGAAACGCTAA+CGG - chr5_4:60342552-60342571 Msa0861180:three_prime_UTR 35.0%
!!! TGCTTTTTCTTCCGATTCAA+TGG - chr5_4:60342647-60342666 Msa0861180:three_prime_UTR 35.0%
ACTTGATTAGATAGGGAATG+AGG - chr5_4:60343301-60343320 Msa0861180:intron 35.0%
CTTGATTAGATAGGGAATGA+GGG - chr5_4:60343302-60343321 Msa0861180:intron 35.0%
TTGATTAGATAGGGAATGAG+GGG - chr5_4:60343303-60343322 Msa0861180:intron 35.0%
AATGCAAGGAATCACGAAAA+TGG + chr5_4:60343432-60343451 None:intergenic 35.0%
! CTTTTAAATGTATGCACGCT+TGG + chr5_4:60343537-60343556 None:intergenic 35.0%
AAAAGCAGTCGTTACTGATA+AGG - chr5_4:60343552-60343571 Msa0861180:intron 35.0%
! GGTCAACGATTTCTTGTTTA+TGG + chr5_4:60343591-60343610 None:intergenic 35.0%
ACAAGAAATCGTTGACCATT+TGG - chr5_4:60343594-60343613 Msa0861180:intron 35.0%
GACGCTTAGTCAAAACTTTA+CGG - chr5_4:60343691-60343710 Msa0861180:intron 35.0%
AATTCCATCTGAGTTTGAGT+TGG - chr5_4:60343731-60343750 Msa0861180:intron 35.0%
!!! TCTGTTGATTTTGTCCGTTT+TGG - chr5_4:60343894-60343913 Msa0861180:intron 35.0%
!!! TTTTGTCCGTTTTGGAAATC+AGG - chr5_4:60343902-60343921 Msa0861180:intron 35.0%
GCAATTCCTGATTTCCAAAA+CGG + chr5_4:60343911-60343930 None:intergenic 35.0%
ATCCAGAAGCTTGAATTGAA+TGG + chr5_4:60344058-60344077 None:intergenic 35.0%
ACTGTTTGCAGTTCAATGTT+TGG - chr5_4:60344080-60344099 Msa0861180:intron 35.0%
CATCATGAATCATGATGCAT+CGG + chr5_4:60344326-60344345 None:intergenic 35.0%
GATCAATATAAGGTGTACAC+AGG + chr5_4:60344481-60344500 None:intergenic 35.0%
!! CCGAGAGAAAATGTTTTGTT+TGG - chr5_4:60344586-60344605 Msa0861180:CDS 35.0%
AGAAGGCAGTAAAATAGTGA+AGG + chr5_4:60344726-60344745 None:intergenic 35.0%
CGGATCTTGCATAGTTAAAA+TGG + chr5_4:60345200-60345219 None:intergenic 35.0%
!! GAAAAGAAGAGATTTTTGGG+TGG + chr5_4:60345262-60345281 None:intergenic 35.0%
TTTCTGTAGCTAAGTTTCCT+GGG - chr5_4:60345389-60345408 Msa0861180:intron 35.0%
AATTTACAGAACTAGTTGGC+TGG + chr5_4:60345523-60345542 None:intergenic 35.0%
TTAACAAGAACACCTAGCTA+TGG + chr5_4:60345645-60345664 None:intergenic 35.0%
TGTAGTCTAATGAAGCTTCA+TGG - chr5_4:60345669-60345688 Msa0861180:intron 35.0%
CATGAGTGTGGGAAAAAATT+AGG - chr5_4:60345701-60345720 Msa0861180:intron 35.0%
GATCTATCAGTCGCTAAAAT+AGG + chr5_4:60345734-60345753 None:intergenic 35.0%
CAGAATGGAAAGAAAGAAAG+TGG + chr5_4:60345841-60345860 None:intergenic 35.0%
TTTGAACAGAGATGTAGAAG+AGG - chr5_4:60345881-60345900 Msa0861180:intron 35.0%
TTGAACAGAGATGTAGAAGA+GGG - chr5_4:60345882-60345901 Msa0861180:intron 35.0%
! GATAGGTTTGCTTAAATTGC+TGG - chr5_4:60346022-60346041 Msa0861180:intron 35.0%
TACTTGCAAAAATCACTCTC+AGG + chr5_4:60346082-60346101 None:intergenic 35.0%
AGAGTAGTTAGGAAATAAGC+AGG - chr5_4:60346415-60346434 Msa0861180:intron 35.0%
AGGACTCTTAGATTGTTAAG+AGG - chr5_4:60346435-60346454 Msa0861180:intron 35.0%
CTCTTAGATTGTTAAGAGGA+AGG - chr5_4:60346439-60346458 Msa0861180:intron 35.0%
!!! TAGTTTTGGGAAACTGAGAA+AGG - chr5_4:60346510-60346529 Msa0861180:intron 35.0%
!!! AGTTTTGGGAAACTGAGAAA+GGG - chr5_4:60346511-60346530 Msa0861180:intron 35.0%
AGTCTAAACTTACAAGGACA+CGG + chr5_4:60346707-60346726 None:intergenic 35.0%
CTTCAGGGAATGAATAAAAG+TGG + chr5_4:60346793-60346812 None:intergenic 35.0%
AAATATGCAGGTAATATCGG+TGG - chr5_4:60346859-60346878 Msa0861180:intron 35.0%
CACATTTGATTGAGAAAAGG+AGG + chr5_4:60346968-60346987 None:intergenic 35.0%
! CTCCTTTTCTCAATCAAATG+TGG - chr5_4:60346966-60346985 Msa0861180:intron 35.0%
TGCCACATTTGATTGAGAAA+AGG + chr5_4:60346971-60346990 None:intergenic 35.0%
GCTTGATTAACAATACCATG+AGG + chr5_4:60347001-60347020 None:intergenic 35.0%
ATGATCACTTGGAATTATGG+AGG - chr5_4:60347043-60347062 Msa0861180:intron 35.0%
GATGACTCCTTTGTTAGTAA+TGG - chr5_4:60347120-60347139 Msa0861180:intron 35.0%
CAAGCTACCATTACTAACAA+AGG + chr5_4:60347130-60347149 None:intergenic 35.0%
AATGAAATATACCTGATGGG+AGG + chr5_4:60347249-60347268 None:intergenic 35.0%
CGGTGAACAAAGATATATTC+CGG - chr5_4:60347285-60347304 Msa0861180:intron 35.0%
!! AGAAGGTGTCATGCAAAATT+AGG + chr5_4:60347471-60347490 None:intergenic 35.0%
!!! CGTGTTTTGGAGGATTTTAT+AGG + chr5_4:60347564-60347583 None:intergenic 35.0%
TATGTCATATGTGGAGATCA+AGG - chr5_4:60347816-60347835 Msa0861180:intron 35.0%
TCAAGGATGAATATAGACTG+AGG - chr5_4:60347833-60347852 Msa0861180:intron 35.0%
GCAGAAAATCTCGTGAAATT+TGG + chr5_4:60347912-60347931 None:intergenic 35.0%
AGGAGCAAATGGAAAGAATA+TGG - chr5_4:60348100-60348119 Msa0861180:intron 35.0%
! AAAGAATATGGACTTTTGGG+AGG - chr5_4:60348112-60348131 Msa0861180:intron 35.0%
!! AAGAATATGGACTTTTGGGA+GGG - chr5_4:60348113-60348132 Msa0861180:intron 35.0%
!!! TGGAGGGTTTAGTTTTATTG+GGG - chr5_4:60348144-60348163 Msa0861180:intron 35.0%
GAACTCAAAAGTTGTATTGG+AGG - chr5_4:60348167-60348186 Msa0861180:intron 35.0%
!! TCTTCTCCTAAGCTTTGTTT+GGG + chr5_4:60348396-60348415 None:intergenic 35.0%
!! TTCTTCTCCTAAGCTTTGTT+TGG + chr5_4:60348397-60348416 None:intergenic 35.0%
TTGACCATAACTAGATTCTG+GGG + chr5_4:60348640-60348659 None:intergenic 35.0%
CTTGACCATAACTAGATTCT+GGG + chr5_4:60348641-60348660 None:intergenic 35.0%
TGATTTAGCACAACATGTTG+AGG + chr5_4:60348771-60348790 None:intergenic 35.0%
TCAAAATCTGTTGTTGCCAT+GGG - chr5_4:60348816-60348835 Msa0861180:intron 35.0%
TCACATATTTACCTCTTGAG+AGG + chr5_4:60348891-60348910 None:intergenic 35.0%
TAAATATGTGACAGTTGTCC+AGG - chr5_4:60348900-60348919 Msa0861180:intron 35.0%
TAGATATGCTCGAAAGAATC+TGG - chr5_4:60349012-60349031 Msa0861180:CDS 35.0%
AGGAGAAGAAAAAACGCATA+AGG + chr5_4:60349085-60349104 None:intergenic 35.0%
AGGTGCCTAAAATTTGATGT+CGG - chr5_4:60349129-60349148 Msa0861180:five_prime_UTR 35.0%
ACTACTCCCATTGTTAACTT+GGG + chr5_4:60349211-60349230 None:intergenic 35.0%
! GAAGAAAAAGCACGAATAGG+AGG + chr5_4:60342639-60342658 None:intergenic 40.0%
! TCGGAAGAAAAAGCACGAAT+AGG + chr5_4:60342642-60342661 None:intergenic 40.0%
CGGACTATTAGCCATTGAAT+CGG + chr5_4:60342661-60342680 None:intergenic 40.0%
ACACCCTACGTTAGTAAGTT+TGG + chr5_4:60343501-60343520 None:intergenic 40.0%
! ACGTAGGGTGTTTGTTTATG+CGG - chr5_4:60343510-60343529 Msa0861180:intron 40.0%
CAAGTTAAACAGGCTCCAAA+TGG + chr5_4:60343612-60343631 None:intergenic 40.0%
AATAGGCACCAAATGGTCAA+CGG + chr5_4:60343654-60343673 None:intergenic 40.0%
CAAGTTCAATAGGCACCAAA+TGG + chr5_4:60343661-60343680 None:intergenic 40.0%
TGCCATTCAATTCAAGCTTC+TGG - chr5_4:60344053-60344072 Msa0861180:intron 40.0%
GCAGTTCAATGTTTGGACTT+CGG - chr5_4:60344087-60344106 Msa0861180:intron 40.0%
TTCTCAATTCAGAGACTTCG+AGG + chr5_4:60344227-60344246 None:intergenic 40.0%
CAAAATTGCTAGGCCAACAT+TGG + chr5_4:60344293-60344312 None:intergenic 40.0%
!! CAATGTTGGCCTAGCAATTT+TGG - chr5_4:60344291-60344310 Msa0861180:CDS 40.0%
ATATAAGGTGTACACAGGTC+AGG + chr5_4:60344476-60344495 None:intergenic 40.0%
CTCATTGCCATCTTTATTCC+TGG - chr5_4:60344519-60344538 Msa0861180:intron 40.0%
AGGGCCAAATACAAAGTTGT+TGG + chr5_4:60345037-60345056 None:intergenic 40.0%
CTATGCAAGATCCGAAACAT+CGG - chr5_4:60345206-60345225 Msa0861180:intron 40.0%
ACTAAGATCTGCCGATGTTT+CGG + chr5_4:60345220-60345239 None:intergenic 40.0%
!!! GGCAGATCTTAGTTTTGATG+AGG - chr5_4:60345227-60345246 Msa0861180:intron 40.0%
!!! TAGTTTTGATGAGGATGCCA+TGG - chr5_4:60345236-60345255 Msa0861180:intron 40.0%
GTTTCTGTAGCTAAGTTTCC+TGG - chr5_4:60345388-60345407 Msa0861180:intron 40.0%
TGGCTAAAATGTTGAACACG+AGG - chr5_4:60345447-60345466 Msa0861180:intron 40.0%
TGCTACTGATCCCAAATGAT+TGG - chr5_4:60345607-60345626 Msa0861180:intron 40.0%
GCTACTGATCCCAAATGATT+GGG - chr5_4:60345608-60345627 Msa0861180:intron 40.0%
CTACTGATCCCAAATGATTG+GGG - chr5_4:60345609-60345628 Msa0861180:intron 40.0%
CAAACTGACCCCAATCATTT+GGG + chr5_4:60345620-60345639 None:intergenic 40.0%
CTACATCTCTGTTCAAAGAC+AGG + chr5_4:60345878-60345897 None:intergenic 40.0%
GCAAAAATCACTCTCAGGAA+AGG + chr5_4:60346077-60346096 None:intergenic 40.0%
TAACTTCCCAGATGAAACCA+AGG + chr5_4:60346266-60346285 None:intergenic 40.0%
AGAGGAAGGGCTTAAATTGT+AGG - chr5_4:60346453-60346472 Msa0861180:intron 40.0%
GAAGGGCTTAAATTGTAGGA+GGG - chr5_4:60346457-60346476 Msa0861180:intron 40.0%
AAGGGCTTAAATTGTAGGAG+GGG - chr5_4:60346458-60346477 Msa0861180:intron 40.0%
!!! GTTTTGGGAAACTGAGAAAG+GGG - chr5_4:60346512-60346531 Msa0861180:intron 40.0%
!! TTTTGGGAAACTGAGAAAGG+GGG - chr5_4:60346513-60346532 Msa0861180:intron 40.0%
CTCTCTCTTAGATAGATCTC+AGG - chr5_4:60346599-60346618 Msa0861180:intron 40.0%
GCTCCATTACAAAGAGGTAA+CGG - chr5_4:60346941-60346960 Msa0861180:intron 40.0%
GAATCCCTGTTATGATCACT+TGG - chr5_4:60347032-60347051 Msa0861180:intron 40.0%
GAATTATGGAGGTAACAGTG+TGG - chr5_4:60347054-60347073 Msa0861180:intron 40.0%
ATTCTTATAGTCCTCCCATC+AGG - chr5_4:60347235-60347254 Msa0861180:intron 40.0%
CATTACAGGTTCATTGTCGA+CGG - chr5_4:60347265-60347284 Msa0861180:intron 40.0%
TCAGCTACATAAGGAAGATC+CGG + chr5_4:60347307-60347326 None:intergenic 40.0%
TCCTTATGTAGCTGATGAGA+TGG - chr5_4:60347312-60347331 Msa0861180:intron 40.0%
CCTTATGTAGCTGATGAGAT+GGG - chr5_4:60347313-60347332 Msa0861180:intron 40.0%
CTTATGTAGCTGATGAGATG+GGG - chr5_4:60347314-60347333 Msa0861180:intron 40.0%
! TATAGGGTGTTTATGCCGTT+CGG + chr5_4:60347547-60347566 None:intergenic 40.0%
! TTGGAGTTTAGAATCCGAAC+AGG - chr5_4:60347594-60347613 Msa0861180:intron 40.0%
! TGGAGTTTAGAATCCGAACA+GGG - chr5_4:60347595-60347614 Msa0861180:intron 40.0%
! GAAGAGTGCAAATGCAGAAT+GGG + chr5_4:60347656-60347675 None:intergenic 40.0%
! AGAAGAGTGCAAATGCAGAA+TGG + chr5_4:60347657-60347676 None:intergenic 40.0%
! TCTAGAGGATCTTGTCCTTT+TGG - chr5_4:60347674-60347693 Msa0861180:intron 40.0%
GCAATCATCGTTACACCAAA+AGG + chr5_4:60347692-60347711 None:intergenic 40.0%
!!! TTCTTCTTTTCTTTGGGGTG+AGG - chr5_4:60347744-60347763 Msa0861180:intron 40.0%
!!! TCTTCTTTTCTTTGGGGTGA+GGG - chr5_4:60347745-60347764 Msa0861180:intron 40.0%
! CACGAGATTTTCTGCTTTCA+TGG - chr5_4:60347917-60347936 Msa0861180:intron 40.0%
!! TAAGGCTTTGTTTGCGAGTT+TGG - chr5_4:60348043-60348062 Msa0861180:intron 40.0%
GGAAAAAAGGAAGGAGCAAA+TGG - chr5_4:60348089-60348108 Msa0861180:intron 40.0%
!! AGAATATGGACTTTTGGGAG+GGG - chr5_4:60348114-60348133 Msa0861180:intron 40.0%
!!! GGAGGGTTTAGTTTTATTGG+GGG - chr5_4:60348145-60348164 Msa0861180:intron 40.0%
GGGGAACTCAAAAGTTGTAT+TGG - chr5_4:60348164-60348183 Msa0861180:intron 40.0%
!! AGTTGTATTGGAGGTTTTGG+AGG - chr5_4:60348176-60348195 Msa0861180:intron 40.0%
!!! GTTGTATTGGAGGTTTTGGA+GGG - chr5_4:60348177-60348196 Msa0861180:intron 40.0%
TTTGGAGGGTGGGAAATATA+AGG + chr5_4:60348351-60348370 None:intergenic 40.0%
!! CTAAGCTTTGTTTGGGAGTT+TGG + chr5_4:60348389-60348408 None:intergenic 40.0%
CAAACTCCCAAACAAAGCTT+AGG - chr5_4:60348387-60348406 Msa0861180:intron 40.0%
CAAACTCAGACACACTTTCA+GGG + chr5_4:60348605-60348624 None:intergenic 40.0%
TCAAACTCAGACACACTTTC+AGG + chr5_4:60348606-60348625 None:intergenic 40.0%
! TGAAAGTGTGTCTGAGTTTG+AGG - chr5_4:60348605-60348624 Msa0861180:intron 40.0%
GCTTGACCATAACTAGATTC+TGG + chr5_4:60348642-60348661 None:intergenic 40.0%
AGACTTTGCAAAAGAGCCAA+TGG - chr5_4:60348677-60348696 Msa0861180:intron 40.0%
!! ACATGTTGAGGCTTTGAAGA+GGG + chr5_4:60348759-60348778 None:intergenic 40.0%
!! AACATGTTGAGGCTTTGAAG+AGG + chr5_4:60348760-60348779 None:intergenic 40.0%
! CATGGCAACAACAGATTTTG+AGG + chr5_4:60348817-60348836 None:intergenic 40.0%
CTCAAAATCTGTTGTTGCCA+TGG - chr5_4:60348815-60348834 Msa0861180:intron 40.0%
CAACTGTCACATATTTCGAC+TGG + chr5_4:60348857-60348876 None:intergenic 40.0%
TCCTTTACAAACCTCTCAAG+AGG - chr5_4:60348877-60348896 Msa0861180:intron 40.0%
ACCTCTTGAGAGGTTTGTAA+AGG + chr5_4:60348881-60348900 None:intergenic 40.0%
! CACTGCCGACATCAAATTTT+AGG + chr5_4:60349137-60349156 None:intergenic 40.0%
AAGTAACTTCGTTCCTGTCA+TGG - chr5_4:60349163-60349182 Msa0861180:five_prime_UTR 40.0%
CACTACTCCCATTGTTAACT+TGG + chr5_4:60349212-60349231 None:intergenic 40.0%
! GATCTGACGCTGTGATGTTT+TGG + chr5_4:60342363-60342382 None:intergenic 45.0%
AACGCTAACGGAAGAGAAGA+CGG - chr5_4:60342564-60342583 Msa0861180:three_prime_UTR 45.0%
! GAAAAAGCACGAATAGGAGG+TGG + chr5_4:60342636-60342655 None:intergenic 45.0%
AGAAAGAGAAAGCGAACCTG+AGG + chr5_4:60342726-60342745 None:intergenic 45.0%
! CGTAGGGTGTTTGTTTATGC+GGG - chr5_4:60343511-60343530 Msa0861180:intron 45.0%
TGGTCCAACTCAAACTCAGA+TGG + chr5_4:60343738-60343757 None:intergenic 45.0%
CCATCCACAATGTGAAGACA+TGG + chr5_4:60343791-60343810 None:intergenic 45.0%
CCATGTCTTCACATTGTGGA+TGG - chr5_4:60343788-60343807 Msa0861180:intron 45.0%
! TTTGTTGTGACGTGTTCCCT+TGG - chr5_4:60344186-60344205 Msa0861180:intron 45.0%
GACAGTAAGCTAGTAGCCAA+GGG + chr5_4:60344205-60344224 None:intergenic 45.0%
ACAGAACTGTCTGCCAATGT+TGG - chr5_4:60344277-60344296 Msa0861180:CDS 45.0%
CAACTCTACATGAGATTCCC+AGG + chr5_4:60344630-60344649 None:intergenic 45.0%
TATGCATTAGCAGCAGACCA+AGG + chr5_4:60344843-60344862 None:intergenic 45.0%
!!! AAGAGATTTTTGGGTGGCCA+TGG + chr5_4:60345256-60345275 None:intergenic 45.0%
!! CAGCGCTGGCATACATAATT+TGG + chr5_4:60345356-60345375 None:intergenic 45.0%
AATTATGTATGCCAGCGCTG+TGG - chr5_4:60345356-60345375 Msa0861180:intron 45.0%
AAGTTTCCTGGGATCGAATC+TGG - chr5_4:60345400-60345419 Msa0861180:intron 45.0%
GCAAACTGACCCCAATCATT+TGG + chr5_4:60345621-60345640 None:intergenic 45.0%
GGAAAGCAGCTAGAGTAGTT+AGG - chr5_4:60346404-60346423 Msa0861180:intron 45.0%
GGAAGGGCTTAAATTGTAGG+AGG - chr5_4:60346456-60346475 Msa0861180:intron 45.0%
AGGGCTTAAATTGTAGGAGG+GGG - chr5_4:60346459-60346478 Msa0861180:intron 45.0%
TTTGGGAAACTGAGAAAGGG+GGG - chr5_4:60346514-60346533 Msa0861180:intron 45.0%
AATAAGCGAATTCTCCTCCC+AGG + chr5_4:60346544-60346563 None:intergenic 45.0%
! CCTCTTTGTAATGGAGCTAG+AGG + chr5_4:60346938-60346957 None:intergenic 45.0%
! CCTCTAGCTCCATTACAAAG+AGG - chr5_4:60346935-60346954 Msa0861180:intron 45.0%
GTTAATCAAGCTCCTGAGCA+AGG - chr5_4:60347010-60347029 Msa0861180:intron 45.0%
ATAACAGGGATTCCTTGCTC+AGG + chr5_4:60347025-60347044 None:intergenic 45.0%
CCCATCTCATCAGCTACATA+AGG + chr5_4:60347316-60347335 None:intergenic 45.0%
CTCAATAGGGTGGGAAAAGA+AGG + chr5_4:60347488-60347507 None:intergenic 45.0%
CACGAGAAACTCAATAGGGT+GGG + chr5_4:60347497-60347516 None:intergenic 45.0%
! GGAGTTTAGAATCCGAACAG+GGG - chr5_4:60347596-60347615 Msa0861180:intron 45.0%
GGGTGTGTGAGAAACTCATA+GGG - chr5_4:60347616-60347635 Msa0861180:intron 45.0%
TGTGTGAGAAACTCATAGGG+TGG - chr5_4:60347619-60347638 Msa0861180:intron 45.0%
GTGTGAGAAACTCATAGGGT+GGG - chr5_4:60347620-60347639 Msa0861180:intron 45.0%
CTGCATTTGCACTCTTCTAG+AGG - chr5_4:60347659-60347678 Msa0861180:intron 45.0%
GCTTGCTTGTATGCAATGTG+TGG - chr5_4:60347710-60347729 Msa0861180:intron 45.0%
!!! CTTCTTTTCTTTGGGGTGAG+GGG - chr5_4:60347746-60347765 Msa0861180:intron 45.0%
!!! TTCTTTTCTTTGGGGTGAGG+GGG - chr5_4:60347747-60347766 Msa0861180:intron 45.0%
GTGCAGGTAACTAGATGTGA+GGG - chr5_4:60347769-60347788 Msa0861180:intron 45.0%
TGCAGGTAACTAGATGTGAG+GGG - chr5_4:60347770-60347789 Msa0861180:intron 45.0%
GTAACTAGATGTGAGGGGTA+AGG - chr5_4:60347775-60347794 Msa0861180:intron 45.0%
TGGATTCTGCACTCTACTGT+TGG - chr5_4:60347862-60347881 Msa0861180:intron 45.0%
!! GCTTTGTTTGCGAGTTTGGA+GGG - chr5_4:60348047-60348066 Msa0861180:intron 45.0%
! CTTTGTTTGCGAGTTTGGAG+GGG - chr5_4:60348048-60348067 Msa0861180:intron 45.0%
AGGAGAGGACTTCGGAAAAA+AGG - chr5_4:60348076-60348095 Msa0861180:intron 45.0%
GAGGACTTCGGAAAAAAGGA+AGG - chr5_4:60348080-60348099 Msa0861180:intron 45.0%
!!! TTGGAGGTTTTGGAGGGTTT+TGG - chr5_4:60348183-60348202 Msa0861180:intron 45.0%
!!! AGGTTTTGGAGGGTTTTGGA+GGG - chr5_4:60348187-60348206 Msa0861180:intron 45.0%
! CTTTGTTTGGGAGTTTGGAG+GGG + chr5_4:60348384-60348403 None:intergenic 45.0%
!! GCTTTGTTTGGGAGTTTGGA+GGG + chr5_4:60348385-60348404 None:intergenic 45.0%
!! AGCTTTGTTTGGGAGTTTGG+AGG + chr5_4:60348386-60348405 None:intergenic 45.0%
TTTCCTGTCCTGTATAGTCC+AGG - chr5_4:60348450-60348469 Msa0861180:intron 45.0%
! GACACACTTTCAGGGTTTTC+TGG + chr5_4:60348597-60348616 None:intergenic 45.0%
! CCATAACTAGATTCTGGGGA+GGG + chr5_4:60348636-60348655 None:intergenic 45.0%
! ACCATAACTAGATTCTGGGG+AGG + chr5_4:60348637-60348656 None:intergenic 45.0%
TTTGCAAAGTCTTCCTCAGC+TGG + chr5_4:60348669-60348688 None:intergenic 45.0%
CAAATAATACTCCCCTCCGT+AGG - chr5_4:60348965-60348984 Msa0861180:CDS 45.0%
AGACCTTCACATACCACCTA+CGG + chr5_4:60348984-60349003 None:intergenic 45.0%
CTAGAACGACGAGGACTTTG+AGG + chr5_4:60342684-60342703 None:intergenic 50.0%
TCTAGATCGCCGATCCTCTT+CGG - chr5_4:60342699-60342718 Msa0861180:three_prime_UTR 50.0%
TTGTCTCGCTCATGACTGCA+TGG - chr5_4:60343041-60343060 Msa0861180:intron 50.0%
GCAAGAAGCCGTTGACCATT+TGG - chr5_4:60343643-60343662 Msa0861180:intron 50.0%
GGAGCCATGTCTTCACATTG+TGG - chr5_4:60343784-60343803 Msa0861180:intron 50.0%
GGACAGTAAGCTAGTAGCCA+AGG + chr5_4:60344206-60344225 None:intergenic 50.0%
ATGAGATTCCCAGGAGAGTG+GGG + chr5_4:60344621-60344640 None:intergenic 50.0%
CATGAGATTCCCAGGAGAGT+GGG + chr5_4:60344622-60344641 None:intergenic 50.0%
ACATGAGATTCCCAGGAGAG+TGG + chr5_4:60344623-60344642 None:intergenic 50.0%
TTTCTGCCAGATTCGATCCC+AGG + chr5_4:60345409-60345428 None:intergenic 50.0%
GAACTAGTTGGCTGGTGTAG+TGG + chr5_4:60345515-60345534 None:intergenic 50.0%
GGTCAGTTTGCACCATAGCT+AGG - chr5_4:60345630-60345649 Msa0861180:intron 50.0%
GGGCTTAAATTGTAGGAGGG+GGG - chr5_4:60346460-60346479 Msa0861180:intron 50.0%
GGCTTAAATTGTAGGAGGGG+GGG - chr5_4:60346461-60346480 Msa0861180:intron 50.0%
TGAGAAAGGGGGGAATTCCT+GGG - chr5_4:60346524-60346543 Msa0861180:intron 50.0%
GGGCCGTTACCTCTTTGTAA+TGG + chr5_4:60346947-60346966 None:intergenic 50.0%
ATGTGGCAGAATGAGCCTCA+TGG - chr5_4:60346983-60347002 Msa0861180:intron 50.0%
GCACGAGAAACTCAATAGGG+TGG + chr5_4:60347498-60347517 None:intergenic 50.0%
GGCGCACGAGAAACTCAATA+GGG + chr5_4:60347501-60347520 None:intergenic 50.0%
GTTTCTCACACACCCCTGTT+CGG + chr5_4:60347611-60347630 None:intergenic 50.0%
GGGGTGTGTGAGAAACTCAT+AGG - chr5_4:60347615-60347634 Msa0861180:intron 50.0%
GGTGCAGGTAACTAGATGTG+AGG - chr5_4:60347768-60347787 Msa0861180:intron 50.0%
!! GGCTTTGTTTGCGAGTTTGG+AGG - chr5_4:60348046-60348065 Msa0861180:intron 50.0%
TTTGCGAGTTTGGAGGGGAA+GGG - chr5_4:60348053-60348072 Msa0861180:intron 50.0%
!! ATATGGACTTTTGGGAGGGG+AGG - chr5_4:60348117-60348136 Msa0861180:intron 50.0%
!! TATGGACTTTTGGGAGGGGA+GGG - chr5_4:60348118-60348137 Msa0861180:intron 50.0%
!!! GAGGTTTTGGAGGGTTTTGG+AGG - chr5_4:60348186-60348205 Msa0861180:intron 50.0%
! TAACTAGATTCTGGGGAGGG+TGG + chr5_4:60348633-60348652 None:intergenic 50.0%
CCCTCCCCAGAATCTAGTTA+TGG - chr5_4:60348633-60348652 Msa0861180:intron 50.0%
TGGTCAAGCATATCCAGCTG+AGG - chr5_4:60348653-60348672 Msa0861180:intron 50.0%
ACTGTAAGATGCAGCTGCGA+AGG + chr5_4:60348708-60348727 None:intergenic 50.0%
CAGCTGCATCTTACAGTCCT+AGG - chr5_4:60348711-60348730 Msa0861180:intron 50.0%
GCATCTTACAGTCCTAGGCA+TGG - chr5_4:60348716-60348735 Msa0861180:intron 50.0%
CATCAGCATTCTCCATGCCT+AGG + chr5_4:60348731-60348750 None:intergenic 50.0%
GGCATGGAGAATGCTGATGT+CGG - chr5_4:60348732-60348751 Msa0861180:intron 50.0%
ATAATACTCCCCTCCGTAGG+TGG - chr5_4:60348968-60348987 Msa0861180:CDS 50.0%
TTCACATACCACCTACGGAG+GGG + chr5_4:60348979-60348998 None:intergenic 50.0%
CTTCACATACCACCTACGGA+GGG + chr5_4:60348980-60348999 None:intergenic 50.0%
! GAACGACGAGGACTTTGAGG+CGG + chr5_4:60342681-60342700 None:intergenic 55.0%
! ATCGGCGATCTAGAACGACG+AGG + chr5_4:60342693-60342712 None:intergenic 55.0%
ACCTGAGGACCGAAGAGGAT+CGG + chr5_4:60342711-60342730 None:intergenic 55.0%
AGTTATCCCCCCACTCTCCT+GGG - chr5_4:60344610-60344629 Msa0861180:CDS 55.0%
TGAGATTCCCAGGAGAGTGG+GGG + chr5_4:60344620-60344639 None:intergenic 55.0%
TATGTATGCCAGCGCTGTGG+TGG - chr5_4:60345359-60345378 Msa0861180:intron 55.0%
CTGAGAAAGGGGGGAATTCC+TGG - chr5_4:60346523-60346542 Msa0861180:intron 55.0%
TGGAGGTAACAGTGTGGCTG+TGG - chr5_4:60347060-60347079 Msa0861180:intron 55.0%
AGGTAACAGTGTGGCTGTGG+AGG - chr5_4:60347063-60347082 Msa0861180:intron 55.0%
GGTAACAGTGTGGCTGTGGA+GGG - chr5_4:60347064-60347083 Msa0861180:intron 55.0%
TGGAGGGATCCTGGGATAAC+TGG - chr5_4:60347080-60347099 Msa0861180:intron 55.0%
GGAGGGATCCTGGGATAACT+GGG - chr5_4:60347081-60347100 Msa0861180:intron 55.0%
CCTAGATGCCCAGTTATCCC+AGG + chr5_4:60347092-60347111 None:intergenic 55.0%
CCTGGGATAACTGGGCATCT+AGG - chr5_4:60347089-60347108 Msa0861180:intron 55.0%
!! TGCAGGAAGGTATTGCAGCG+AGG - chr5_4:60347196-60347215 Msa0861180:intron 55.0%
!! AGGAAGGTATTGCAGCGAGG+TGG - chr5_4:60347199-60347218 Msa0861180:intron 55.0%
GGGCGCACGAGAAACTCAAT+AGG + chr5_4:60347502-60347521 None:intergenic 55.0%
GTTTGCGAGTTTGGAGGGGA+AGG - chr5_4:60348052-60348071 Msa0861180:intron 55.0%
TTTGGGAGTTTGGAGGGGAG+GGG + chr5_4:60348379-60348398 None:intergenic 55.0%
GTTTGGGAGTTTGGAGGGGA+GGG + chr5_4:60348380-60348399 None:intergenic 55.0%
TGTTTGGGAGTTTGGAGGGG+AGG + chr5_4:60348381-60348400 None:intergenic 55.0%
TCGCCTGGACTATACAGGAC+AGG + chr5_4:60348456-60348475 None:intergenic 55.0%
GACACTCGCCTGGACTATAC+AGG + chr5_4:60348461-60348480 None:intergenic 55.0%
AGCAATCATGGACACTCGCC+TGG + chr5_4:60348471-60348490 None:intergenic 55.0%
AGCTGCGAAGGAACAGCCAT+TGG + chr5_4:60348696-60348715 None:intergenic 55.0%
TTGCCATGGGAGTGACTCAC+AGG - chr5_4:60348829-60348848 Msa0861180:intron 55.0%
GAACCTGTGAGTCACTCCCA+TGG + chr5_4:60348835-60348854 None:intergenic 55.0%
CCTTCACATACCACCTACGG+AGG + chr5_4:60348981-60349000 None:intergenic 55.0%
CCTCCGTAGGTGGTATGTGA+AGG - chr5_4:60348978-60348997 Msa0861180:CDS 55.0%
TTCACGACCGGAAGGATCGC+CGG + chr5_4:60342604-60342623 None:intergenic 60.0%
AGCGAACCTGAGGACCGAAG+AGG + chr5_4:60342716-60342735 None:intergenic 60.0%
CAGTTATCCCCCCACTCTCC+TGG - chr5_4:60344609-60344628 Msa0861180:CDS 60.0%
GAGATTCCCAGGAGAGTGGG+GGG + chr5_4:60344619-60344638 None:intergenic 60.0%
ACACTCTTCCACCACAGCGC+TGG + chr5_4:60345370-60345389 None:intergenic 60.0%
TGTAGGAGGGGGGGTAGAAG+AGG - chr5_4:60346470-60346489 Msa0861180:intron 60.0%
GAAAGGGGGGAATTCCTGGG+AGG - chr5_4:60346527-60346546 Msa0861180:intron 60.0%
TGTGGCTGTGGAGGGATCCT+GGG - chr5_4:60347072-60347091 Msa0861180:intron 60.0%
GGTATTGCAGCGAGGTGGCA+AGG - chr5_4:60347204-60347223 Msa0861180:intron 60.0%
CTCGTGCGCCCTATGCAGTT+CGG - chr5_4:60347511-60347530 Msa0861180:intron 60.0%
TTTGGAGGGGAAGGGAGGAG+AGG - chr5_4:60348061-60348080 Msa0861180:intron 60.0%
GGGAAGGGAGGAGAGGACTT+CGG - chr5_4:60348068-60348087 Msa0861180:intron 60.0%
!! CTTTTGGGAGGGGAGGGCTT+TGG - chr5_4:60348124-60348143 Msa0861180:intron 60.0%
AGGGGAGGGATTTGGAGGGT+GGG + chr5_4:60348361-60348380 None:intergenic 60.0%
GACGGAGCTATTCCCGACGC+CGG - chr5_4:60342582-60342601 Msa0861180:three_prime_UTR 65.0%
GCGTGAGGTTCACGACCGGA+AGG + chr5_4:60342612-60342631 None:intergenic 65.0%
TGGCGCGTGAGGTTCACGAC+CGG + chr5_4:60342616-60342635 None:intergenic 65.0%
CGAATAGGAGGTGGCGCGTG+AGG + chr5_4:60342627-60342646 None:intergenic 65.0%
GCCGATCCTCTTCGGTCCTC+AGG - chr5_4:60342707-60342726 Msa0861180:three_prime_UTR 65.0%
GTGTGGCTGTGGAGGGATCC+TGG - chr5_4:60347071-60347090 Msa0861180:intron 65.0%
!! TCTTTGGGGTGAGGGGGTGC+AGG - chr5_4:60347753-60347772 Msa0861180:intron 65.0%
GCGAGTTTGGAGGGGAAGGG+AGG - chr5_4:60348056-60348075 Msa0861180:intron 65.0%
! TTGGGAGGGGAGGGCTTTGG+AGG - chr5_4:60348127-60348146 Msa0861180:intron 65.0%
!! TGGGAGGGGAGGGCTTTGGA+GGG - chr5_4:60348128-60348147 Msa0861180:intron 65.0%
GAGGGGAGGGATTTGGAGGG+TGG + chr5_4:60348362-60348381 None:intergenic 65.0%
GGGGAGGGGAGGGATTTGGA+GGG + chr5_4:60348365-60348384 None:intergenic 65.0%
AGGGGAGGGGAGGGATTTGG+AGG + chr5_4:60348366-60348385 None:intergenic 65.0%
TGGAGGGGAGGGGAGGGATT+TGG + chr5_4:60348369-60348388 None:intergenic 65.0%
GGAGTTTGGAGGGGAGGGGA+GGG + chr5_4:60348375-60348394 None:intergenic 65.0%
ACCGGAAGGATCGCCGGCGT+CGG + chr5_4:60342598-60342617 None:intergenic 70.0%
GGGAGTTTGGAGGGGAGGGG+AGG + chr5_4:60348376-60348395 None:intergenic 70.0%
CCGGAAGGATCGCCGGCGTC+GGG + chr5_4:60342597-60342616 None:intergenic 75.0%
CCCGACGCCGGCGATCCTTC+CGG - chr5_4:60342594-60342613 Msa0861180:three_prime_UTR 75.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 60342360 60349277 60342360 ID=Msa0861180;Name=Msa0861180
chr5_4 mRNA 60342360 60349277 60342360 ID=Msa0861180-mRNA-1;Parent=Msa0861180;Name=Msa0861180-mRNA-1;_AED=0.07;_eAED=0.07;_QI=198|1|1|1|1|1|4|375|276
chr5_4 exon 60342360 60343052 60342360 ID=Msa0861180-mRNA-1:exon:18659;Parent=Msa0861180-mRNA-1
chr5_4 exon 60344274 60344436 60344274 ID=Msa0861180-mRNA-1:exon:18658;Parent=Msa0861180-mRNA-1
chr5_4 exon 60344527 60344705 60344527 ID=Msa0861180-mRNA-1:exon:18657;Parent=Msa0861180-mRNA-1
chr5_4 exon 60348909 60349277 60348909 ID=Msa0861180-mRNA-1:exon:18656;Parent=Msa0861180-mRNA-1
chr5_4 five_prime_UTR 60349080 60349277 60349080 ID=Msa0861180-mRNA-1:five_prime_utr;Parent=Msa0861180-mRNA-1
chr5_4 CDS 60348909 60349079 60348909 ID=Msa0861180-mRNA-1:cds;Parent=Msa0861180-mRNA-1
chr5_4 CDS 60344527 60344705 60344527 ID=Msa0861180-mRNA-1:cds;Parent=Msa0861180-mRNA-1
chr5_4 CDS 60344274 60344436 60344274 ID=Msa0861180-mRNA-1:cds;Parent=Msa0861180-mRNA-1
chr5_4 CDS 60342735 60343052 60342735 ID=Msa0861180-mRNA-1:cds;Parent=Msa0861180-mRNA-1
chr5_4 three_prime_UTR 60342360 60342734 60342360 ID=Msa0861180-mRNA-1:three_prime_utr;Parent=Msa0861180-mRNA-1
Gene Sequence

>Msa0861180

ATGGGAAACGCTAACGGAAGAGAAGACGGAGCTATTCCCGACGCCGGCGATCCTTCCGGTCGTGAACCTCACGCGCCACCTCCTATTCGTGCTTTTTCTTCCGATTCAATGGCTAATAGTCCGCCTCAAAGTCCTCGTCGTTCTAGATCGCCGATCCTCTTCGGTCCTCAGGTTCCTCTAGCTCCATTACAAAGAGGTAACGGCCCTCCTTTTCTCAATCAAATGTGGCAGAATGAGCCTCATGGTATTGTTAATCAAGCTCCTGAGCAAGGAATCCCTGTTATGATCACTTGGAATTATGGAGGTAACAGTGTGGCTGTGGAGGGATCCTGGGATAACTGGGCATCTAGGAAGGTATTGCAGCGAGGTGGCAAGGATCACTCGATTCTTATAGTCCTCCCATCAGGTATATTTCATTACAGGTTCATTGTCGACGGTGAACAAAGATATATTCCGGATCTTCCTTATGTAGCTGATGAGATGGGGAATGTCTGCAATCTTCTTGATGTTAATGATTATGTGCCAGAAAACCCTGAAAGTGTGTCTGAGTTTGAGGCACCACCCTCCCCAGAATCTAGTTATGGTCAAGCATATCCAGCTGAGGAAGACTTTGCAAAAGAGCCAATGGCTGTTCCTTCGCAGCTGCATCTTACAGTCCTAGGCATGGAGAATGCTGATGTCGGTCCCTCTTCAAAGCCTCAACATGTTGTGCTAAATCATGTCTTCATAGAGAAAAATATGGCCTCAAAATCTGTTGTTGCCATGGGAGTGACTCACAGGTTCCAGTCGAAATATGTGACAGTTGTCCTTTACAAACCTCTCAAGAGGTAA
Protein sequence

>Msa0861180

MGNANGREDGAIPDAGDPSGREPHAPPPIRAFSSDSMANSPPQSPRRSRSPILFGPQVPLAPLQRGNGPPFLNQMWQNEPHGIVNQAPEQGIPVMITWNYGGNSVAVEGSWDNWASRKVLQRGGKDHSILIVLPSGIFHYRFIVDGEQRYIPDLPYVADEMGNVCNLLDVNDYVPENPESVSEFEAPPSPESSYGQAYPAEEDFAKEPMAVPSQLHLTVLGMENADVGPSSKPQHVVLNHVFIEKNMASKSVVAMGVTHRFQSKYVTVVLYKPLKR*