Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0868410 | XP_013453245.1 | 90.848 | 448 | 31 | 2 | 5 | 442 | 98 | 545 | 0.0 | 793 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0868410 | sp|Q6H501|HKT6_ORYSJ | 46.993 | 449 | 217 | 6 | 1 | 441 | 95 | 530 | 7.67e-135 | 401 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0868410 | A0A072UBR1 | 90.848 | 448 | 31 | 2 | 5 | 442 | 98 | 545 | 0.0 | 793 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0868410 | Msa0925420 | 0.911529 | 5.485682e-83 | -8.615850e-47 |
| Msa0868410 | Msa1001690 | 0.936418 | 1.792481e-97 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0868410 | MtrunA17_Chr6g0488721 | 90.848 | 448 | 31 | 2 | 5 | 442 | 98 | 545 | 0.0 | 793 |
| Msa0868410 | MtrunA17_Chr6g0488681 | 74.510 | 459 | 99 | 4 | 1 | 442 | 93 | 550 | 0.0 | 672 |
| Msa0868410 | MtrunA17_Chr6g0488731 | 50.331 | 453 | 196 | 5 | 1 | 441 | 100 | 535 | 7.21e-148 | 431 |
| Msa0868410 | MtrunA17_Chr6g0488671 | 70.530 | 302 | 74 | 3 | 5 | 302 | 86 | 376 | 1.18e-142 | 412 |
| Msa0868410 | MtrunA17_Chr6g0488711 | 46.382 | 304 | 136 | 5 | 1 | 300 | 86 | 366 | 5.69e-74 | 236 |
| Msa0868410 | MtrunA17_Chr6g0488661 | 79.104 | 67 | 14 | 0 | 375 | 441 | 4 | 70 | 1.86e-32 | 117 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0868410 | AT4G10310.1 | 44.760 | 458 | 211 | 7 | 1 | 441 | 69 | 501 | 2.54e-124 | 370 |
Find 79 sgRNAs with CRISPR-Local
Find 257 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATTCATGTGATTTAATATT+TGG | 0.111690 | 6_1:-1907955 | None:intergenic |
| GTATTTGTCTATGAAATATT+TGG | 0.172984 | 6_1:+1908005 | Msa0868410:CDS |
| GGATTGGATTTGTTGGAAAA+TGG | 0.247031 | 6_1:+1912748 | Msa0868410:CDS |
| CTCATTCCACAAGTACTTCT+TGG | 0.250746 | 6_1:+1908255 | Msa0868410:CDS |
| ACCACCTATGAACATTAATA+TGG | 0.277554 | 6_1:-1907761 | None:intergenic |
| CTCCAAATAGACCTATAAAA+TGG | 0.306144 | 6_1:-1908059 | None:intergenic |
| TATTTGGGTTATATAGTTCT+TGG | 0.306601 | 6_1:+1908021 | Msa0868410:CDS |
| GAAACACACTCTTTATCTTA+TGG | 0.310209 | 6_1:+1908404 | Msa0868410:CDS |
| TATTTGTCTATGAAATATTT+GGG | 0.336831 | 6_1:+1908006 | Msa0868410:CDS |
| AACAAATGGATTGGATTTGT+TGG | 0.352409 | 6_1:+1912741 | Msa0868410:CDS |
| TCAGAACGTAGGATTTACTA+TGG | 0.370500 | 6_1:+1912674 | Msa0868410:CDS |
| AAGCATGTCCACGGTTGAAA+TGG | 0.379857 | 6_1:+1907705 | None:intergenic |
| CGTGTCTTGAATTTATGCTT+TGG | 0.390885 | 6_1:-1908539 | None:intergenic |
| TCACACATTAAAATTTCCTT+TGG | 0.394211 | 6_1:-1912984 | None:intergenic |
| CTTATACTTGTTATGTTGCT+TGG | 0.402643 | 6_1:+1912792 | Msa0868410:CDS |
| GGTTACAAACACTTGTTACA+TGG | 0.403785 | 6_1:+1908381 | Msa0868410:CDS |
| AATTATATCACAAGCAATCT+TGG | 0.407295 | 6_1:+1908587 | Msa0868410:CDS |
| AATTCAGATTGAAGTTGAAA+TGG | 0.415458 | 6_1:+1907894 | Msa0868410:CDS |
| CTGAATTTGATCAACAATGA+TGG | 0.416216 | 6_1:-1907878 | None:intergenic |
| TTTAATATTTGGCTTTGATA+AGG | 0.417107 | 6_1:-1907944 | None:intergenic |
| ATTACCATATTAATGTTCAT+AGG | 0.419635 | 6_1:+1907757 | Msa0868410:CDS |
| TCATTCCACAAGTACTTCTT+GGG | 0.420368 | 6_1:+1908256 | Msa0868410:CDS |
| CGAGTGCTATATGCTAATAA+AGG | 0.425458 | 6_1:+1913041 | Msa0868410:three_prime_UTR |
| AGGCAAATTGTGAAAACAAA+TGG | 0.428571 | 6_1:+1912727 | Msa0868410:CDS |
| ATATTGCTGTTGAAGTTGTC+AGG | 0.430083 | 6_1:+1909706 | Msa0868410:CDS |
| AATTGTGAAAACAAATGGAT+TGG | 0.439853 | 6_1:+1912732 | Msa0868410:CDS |
| CTCACTGCTTTCTGACAATC+CGG | 0.446157 | 6_1:-1909541 | None:intergenic |
| TGAATTTGATCAACAATGAT+GGG | 0.452048 | 6_1:-1907877 | None:intergenic |
| GTAGCACAAGTGAAAATTTG+AGG | 0.459197 | 6_1:+1907983 | Msa0868410:CDS |
| CTTACACCTCATTCCTCCCT+TGG | 0.459685 | 6_1:+1909508 | Msa0868410:CDS |
| GTTTCAACATTTGCAAGTTG+TGG | 0.462060 | 6_1:+1908171 | Msa0868410:CDS |
| CTCCCTTGGAAAGACGGATC+CGG | 0.464536 | 6_1:+1909522 | Msa0868410:CDS |
| TGGAATTCAGAAGGTTTGAA+AGG | 0.480618 | 6_1:+1908480 | Msa0868410:CDS |
| TTGAACAATGTAGAGGAGGT+TGG | 0.493563 | 6_1:+1908360 | Msa0868410:CDS |
| TGGTAATGATGATTAATTGA+GGG | 0.499693 | 6_1:-1907741 | None:intergenic |
| GGAATTCAGAAGGTTTGAAA+GGG | 0.512872 | 6_1:+1908481 | Msa0868410:CDS |
| ATTGCTACATTGCATGGAAG+TGG | 0.514767 | 6_1:-1913017 | None:intergenic |
| TTTATAAGAAGAAAGAGTGT+AGG | 0.516889 | 6_1:+1908331 | Msa0868410:CDS |
| GTTACAAACACTTGTTACAT+GGG | 0.518560 | 6_1:+1908382 | Msa0868410:CDS |
| AATCCGGATCCGTCTTTCCA+AGG | 0.531162 | 6_1:-1909525 | None:intergenic |
| TTTAGTACTTGTTTAGCACT+AGG | 0.532880 | 6_1:-1908105 | None:intergenic |
| CAAGGGAGGAATGAGGTGTA+AGG | 0.535818 | 6_1:-1909507 | None:intergenic |
| ATGAATCAGAGAAGTTTCCA+TGG | 0.537160 | 6_1:-1912849 | None:intergenic |
| TACAAAATCTCAAGCATGGA+GGG | 0.537636 | 6_1:-1908290 | None:intergenic |
| TCATTCCTCCCTTGGAAAGA+CGG | 0.539809 | 6_1:+1909516 | Msa0868410:CDS |
| TTGAAGACATTGAAATTGAG+AGG | 0.543741 | 6_1:-1909684 | None:intergenic |
| AACTGAGAGGAAACAATTGA+AGG | 0.543924 | 6_1:+1909656 | Msa0868410:CDS |
| ACAGAGATGCAGATAATCCA+TGG | 0.550388 | 6_1:+1912832 | Msa0868410:CDS |
| CTAATGGATTGGAATTCAGA+AGG | 0.552605 | 6_1:+1908471 | Msa0868410:CDS |
| TATTCCAACAAATGAAAACA+TGG | 0.552785 | 6_1:+1908197 | Msa0868410:CDS |
| ATGGTAATGATGATTAATTG+AGG | 0.556657 | 6_1:-1907742 | None:intergenic |
| GGAATGAGGTGTAAGGTGGA+AGG | 0.557623 | 6_1:-1909500 | None:intergenic |
| CACAGTTTCAAGCATGTCCA+CGG | 0.566687 | 6_1:+1907696 | None:intergenic |
| TGTGAAATCGAAGCTGATGT+TGG | 0.569645 | 6_1:-1912887 | None:intergenic |
| CATATACAAAATCTCAAGCA+TGG | 0.570855 | 6_1:-1908294 | None:intergenic |
| TTGATAAGGAAGTTATGTGA+AGG | 0.575813 | 6_1:-1907930 | None:intergenic |
| ATCCGGATCCGTCTTTCCAA+GGG | 0.578745 | 6_1:-1909524 | None:intergenic |
| ACTCGAATTGCTACATTGCA+TGG | 0.580840 | 6_1:-1913023 | None:intergenic |
| GTTGGAAAATGGAGTGATGA+GGG | 0.582784 | 6_1:+1912759 | Msa0868410:CDS |
| GAATTTGATCAACAATGATG+GGG | 0.595346 | 6_1:-1907876 | None:intergenic |
| AGCATAAATTCAAGACACGC+TGG | 0.597785 | 6_1:+1908543 | Msa0868410:CDS |
| TGTTGGAAAATGGAGTGATG+AGG | 0.598002 | 6_1:+1912758 | Msa0868410:CDS |
| GTGTTCCCAAGAAGTACTTG+TGG | 0.605805 | 6_1:-1908261 | None:intergenic |
| ACCATATTAATGTTCATAGG+TGG | 0.608285 | 6_1:+1907760 | Msa0868410:CDS |
| TAGCACTAGGAATCATTGCA+AGG | 0.608330 | 6_1:-1908092 | None:intergenic |
| GGGAGGAATGAGGTGTAAGG+TGG | 0.611974 | 6_1:-1909504 | None:intergenic |
| AATTGTCTTAAAATGACCAA+AGG | 0.624818 | 6_1:+1912968 | Msa0868410:three_prime_UTR |
| GTCTTTCCAAGGGAGGAATG+AGG | 0.630306 | 6_1:-1909514 | None:intergenic |
| CAGAACGTAGGATTTACTAT+GGG | 0.630658 | 6_1:+1912675 | Msa0868410:CDS |
| AATGAAATAAAGCTCTAACA+TGG | 0.631354 | 6_1:-1907797 | None:intergenic |
| CGGATCCGTCTTTCCAAGGG+AGG | 0.634629 | 6_1:-1909521 | None:intergenic |
| GATTGTCAGAAAGCAGTGAG+AGG | 0.639761 | 6_1:+1909544 | Msa0868410:CDS |
| TTGCTTGTGATATAATTGAG+AGG | 0.644531 | 6_1:-1908581 | None:intergenic |
| ACACGCTGGAGAAACTATTG+TGG | 0.648012 | 6_1:+1908557 | Msa0868410:CDS |
| TACTAGTTTGCATAACTGAG+AGG | 0.669787 | 6_1:+1909643 | Msa0868410:CDS |
| TGAACGACAGTTGCATCCAG+AGG | 0.684181 | 6_1:+1912707 | Msa0868410:CDS |
| GAAATAAAGCTCTAACATGG+AGG | 0.686705 | 6_1:-1907794 | None:intergenic |
| ATACAAAATCTCAAGCATGG+AGG | 0.690104 | 6_1:-1908291 | None:intergenic |
| GACAGTGCATATCAGAACGT+AGG | 0.730512 | 6_1:+1912663 | Msa0868410:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATTATTTTTTTTATTATT+AGG | + | chr6_1:1908677-1908696 | Msa0868410:intron | 0.0% |
| !! | AATTATTATCAAAAATTGAT+TGG | + | chr6_1:1908507-1908526 | Msa0868410:CDS | 10.0% |
| !! | AAGATTTAATAAAAAAATTG+AGG | + | chr6_1:1908799-1908818 | Msa0868410:intron | 10.0% |
| !! | AGATTTAATAAAAAAATTGA+GGG | + | chr6_1:1908800-1908819 | Msa0868410:intron | 10.0% |
| !! | TAAATTATACTATACTATTT+AGG | - | chr6_1:1909384-1909403 | None:intergenic | 10.0% |
| !!! | ATTAAAAAAAATCTCTTTTT+TGG | + | chr6_1:1909767-1909786 | Msa0868410:intron | 10.0% |
| !!! | TTAAAAAAAATCTCTTTTTT+GGG | + | chr6_1:1909768-1909787 | Msa0868410:intron | 10.0% |
| !! | AATAATATATATTATCAACT+AGG | + | chr6_1:1910013-1910032 | Msa0868410:intron | 10.0% |
| !!! | ATTTTAATCATATTTTGTTA+TGG | - | chr6_1:1910366-1910385 | None:intergenic | 10.0% |
| !! | CTAATTCATTAAAAATAATA+AGG | + | chr6_1:1910745-1910764 | Msa0868410:intron | 10.0% |
| !!! | TTTTATCGTAAATAATATTT+CGG | - | chr6_1:1912009-1912028 | None:intergenic | 10.0% |
| !!! | AAAGTTATTAAAAAAGTATT+TGG | + | chr6_1:1913091-1913110 | Msa0868410:three_prime_UTR | 10.0% |
| !! | TATTTGTCTATGAAATATTT+GGG | + | chr6_1:1908006-1908025 | Msa0868410:CDS | 15.0% |
| !!! | ATTATAATTCTCCATTTTAT+AGG | + | chr6_1:1908048-1908067 | Msa0868410:CDS | 15.0% |
| !! | TATTAAAAAATTACAATCCA+AGG | + | chr6_1:1908845-1908864 | Msa0868410:intron | 15.0% |
| !! | TATAACATTTGCAATATTAA+TGG | + | chr6_1:1909091-1909110 | Msa0868410:intron | 15.0% |
| !! | ATAACATTTGCAATATTAAT+GGG | + | chr6_1:1909092-1909111 | Msa0868410:intron | 15.0% |
| !!! | AAAGAGATTTTTTTTAATGT+TGG | - | chr6_1:1909765-1909784 | None:intergenic | 15.0% |
| !!! | TTTTTGTTTATCATAATGAT+CGG | - | chr6_1:1910115-1910134 | None:intergenic | 15.0% |
| !! | ACTAACTTCTTATAATAATT+TGG | + | chr6_1:1911212-1911231 | Msa0868410:intron | 15.0% |
| !! | AAAAAATTGTCATTAAAACA+TGG | + | chr6_1:1911810-1911829 | Msa0868410:intron | 15.0% |
| !!! | TGTATACCTTTAATTTAATT+AGG | + | chr6_1:1912108-1912127 | Msa0868410:intron | 15.0% |
| !! | CATATGTATCTTTATATTAT+AGG | + | chr6_1:1912163-1912182 | Msa0868410:intron | 15.0% |
| !! | TAAACTAAAAAAAACCAATA+TGG | - | chr6_1:1912228-1912247 | None:intergenic | 15.0% |
| !!! | TGGTTTTTTTTAGTTTAAAT+TGG | + | chr6_1:1912231-1912250 | Msa0868410:intron | 15.0% |
| !! | TAATTAAGTTTGATGAAAAA+AGG | - | chr6_1:1912319-1912338 | None:intergenic | 15.0% |
| !!! | ATTTGTTTTAAATTAAGACT+GGG | - | chr6_1:1912423-1912442 | None:intergenic | 15.0% |
| !!! | AATTTGTTTTAAATTAAGAC+TGG | - | chr6_1:1912424-1912443 | None:intergenic | 15.0% |
| !!! | AGTCTTAATTTAAAACAAAT+TGG | + | chr6_1:1912423-1912442 | Msa0868410:intron | 15.0% |
| !! | TCAACAATAAAAATTTAGTA+TGG | + | chr6_1:1913066-1913085 | Msa0868410:three_prime_UTR | 15.0% |
| !! | ATTACCATATTAATGTTCAT+AGG | + | chr6_1:1907757-1907776 | Msa0868410:CDS | 20.0% |
| !!! | TTTAATATTTGGCTTTGATA+AGG | - | chr6_1:1907947-1907966 | None:intergenic | 20.0% |
| !! | GATTCATGTGATTTAATATT+TGG | - | chr6_1:1907958-1907977 | None:intergenic | 20.0% |
| !! | GTATTTGTCTATGAAATATT+TGG | + | chr6_1:1908005-1908024 | Msa0868410:CDS | 20.0% |
| !! | TAAACAAGTACTAAAAAACA+AGG | + | chr6_1:1908113-1908132 | Msa0868410:CDS | 20.0% |
| !! | AAACAAGTACTAAAAAACAA+GGG | + | chr6_1:1908114-1908133 | Msa0868410:CDS | 20.0% |
| !! | TATAGTAAAAATTGAGAAAG+TGG | - | chr6_1:1908151-1908170 | None:intergenic | 20.0% |
| !!! | AAAAATGACTAGTTAAACTA+AGG | - | chr6_1:1908953-1908972 | None:intergenic | 20.0% |
| !!! | TAGTTTAACTAGTCATTTTT+AGG | + | chr6_1:1908953-1908972 | Msa0868410:intron | 20.0% |
| !! | ATGTGAAATATTGCATAAAT+TGG | - | chr6_1:1909012-1909031 | None:intergenic | 20.0% |
| !! | TCAAATGTAGAGAATTATAT+GGG | - | chr6_1:1908903-1908922 | None:intergenic | 20.0% |
| !!! | CAATATTAATGGGTTTATAT+AGG | + | chr6_1:1909102-1909121 | Msa0868410:intron | 20.0% |
| !! | TTACTTTATCTAGGTTTAAT+TGG | + | chr6_1:1909165-1909184 | Msa0868410:intron | 20.0% |
| !! | AGTATAGAAAAATCCAATAT+AGG | - | chr6_1:1909218-1909237 | None:intergenic | 20.0% |
| !!! | ATACTATTTAGGTTTTACTT+TGG | - | chr6_1:1909373-1909392 | None:intergenic | 20.0% |
| !!! | TACTAGGCTAAATTTTATTT+TGG | - | chr6_1:1909412-1909431 | None:intergenic | 20.0% |
| !! | AGTAAACAGTATTATATACT+AGG | - | chr6_1:1909428-1909447 | None:intergenic | 20.0% |
| !! | TGTGAATTAGTAGAAAAATA+TGG | + | chr6_1:1909973-1909992 | Msa0868410:intron | 20.0% |
| !!! | ATATTTTGTTATGGTGTAAA+TGG | - | chr6_1:1910357-1910376 | None:intergenic | 20.0% |
| !! | AAATATGATTAAAATCAGCA+TGG | + | chr6_1:1910371-1910390 | Msa0868410:intron | 20.0% |
| !!! | TGTTGTTTTTACTTTTTACA+CGG | + | chr6_1:1910589-1910608 | Msa0868410:intron | 20.0% |
| !! | TGGTAATTATCATAATTGAA+AGG | + | chr6_1:1910708-1910727 | Msa0868410:intron | 20.0% |
| !!! | AATAGAGCATTAAAAACAAA+AGG | + | chr6_1:1910873-1910892 | Msa0868410:intron | 20.0% |
| !! | AATATCATTCACTAATGATA+TGG | + | chr6_1:1911363-1911382 | Msa0868410:intron | 20.0% |
| !!! | CAGAATTATATGTCATTTTA+CGG | - | chr6_1:1911473-1911492 | None:intergenic | 20.0% |
| !! | AAAATACAAGAGAGAAAATA+TGG | - | chr6_1:1911606-1911625 | None:intergenic | 20.0% |
| !! | AATTATTATACCAGAGATAA+AGG | + | chr6_1:1911676-1911695 | Msa0868410:intron | 20.0% |
| !! | AAGTAACATTGATATTTCAT+TGG | + | chr6_1:1911900-1911919 | Msa0868410:intron | 20.0% |
| !! | TTGTAAAACGACTTATAATT+TGG | + | chr6_1:1911925-1911944 | Msa0868410:intron | 20.0% |
| !! | TGTAAAACGACTTATAATTT+GGG | + | chr6_1:1911926-1911945 | Msa0868410:intron | 20.0% |
| !!! | TTTTATTACACTAAATGAGT+CGG | - | chr6_1:1912060-1912079 | None:intergenic | 20.0% |
| !! | TGAACACCTAATTAAATTAA+AGG | - | chr6_1:1912117-1912136 | None:intergenic | 20.0% |
| !!! | TACATATGAGTTAGTTTTAA+GGG | - | chr6_1:1912151-1912170 | None:intergenic | 20.0% |
| !!! | ATACATATGAGTTAGTTTTA+AGG | - | chr6_1:1912152-1912171 | None:intergenic | 20.0% |
| !!! | CTACATACATTTTAACATTA+AGG | - | chr6_1:1912572-1912591 | None:intergenic | 20.0% |
| !! | CTTAATGTTAAAATGTATGT+AGG | + | chr6_1:1912570-1912589 | Msa0868410:intron | 20.0% |
| !!! | TTTTAAGACAATTTGTACAT+TGG | - | chr6_1:1912961-1912980 | None:intergenic | 20.0% |
| !! | TGGTAATGATGATTAATTGA+GGG | - | chr6_1:1907744-1907763 | None:intergenic | 25.0% |
| !! | ATGGTAATGATGATTAATTG+AGG | - | chr6_1:1907745-1907764 | None:intergenic | 25.0% |
| !! | AATGAAATAAAGCTCTAACA+TGG | - | chr6_1:1907800-1907819 | None:intergenic | 25.0% |
| ! | TGAATTTGATCAACAATGAT+GGG | - | chr6_1:1907880-1907899 | None:intergenic | 25.0% |
| ! | AATTCAGATTGAAGTTGAAA+TGG | + | chr6_1:1907894-1907913 | Msa0868410:CDS | 25.0% |
| !! | TATTTGGGTTATATAGTTCT+TGG | + | chr6_1:1908021-1908040 | Msa0868410:CDS | 25.0% |
| ! | TATTCCAACAAATGAAAACA+TGG | + | chr6_1:1908197-1908216 | Msa0868410:CDS | 25.0% |
| !!! | GTTGTTTTTAGAAAGAATTC+AGG | + | chr6_1:1908219-1908238 | Msa0868410:CDS | 25.0% |
| !! | ATGCTTGAGATTTTGTATAT+GGG | + | chr6_1:1908296-1908315 | Msa0868410:CDS | 25.0% |
| !! | AGATTTTGTATATGGGTATT+AGG | + | chr6_1:1908303-1908322 | Msa0868410:CDS | 25.0% |
| !! | GATTTTGTATATGGGTATTA+GGG | + | chr6_1:1908304-1908323 | Msa0868410:CDS | 25.0% |
| !! | TTTATAAGAAGAAAGAGTGT+AGG | + | chr6_1:1908331-1908350 | Msa0868410:CDS | 25.0% |
| !!! | AGTTACTTTGTTTTGTCTAA+TGG | + | chr6_1:1908455-1908474 | Msa0868410:CDS | 25.0% |
| ! | AATTATATCACAAGCAATCT+TGG | + | chr6_1:1908587-1908606 | Msa0868410:CDS | 25.0% |
| !!! | TATTATTAGGCCATTTTGAA+TGG | + | chr6_1:1908690-1908709 | Msa0868410:intron | 25.0% |
| !!! | ATTATTAGGCCATTTTGAAT+GGG | + | chr6_1:1908691-1908710 | Msa0868410:intron | 25.0% |
| !!! | TTATTAGAGTGTTGTACATT+TGG | - | chr6_1:1908756-1908775 | None:intergenic | 25.0% |
| !!! | CTACATTTGAGTATTTTAGT+GGG | - | chr6_1:1908893-1908912 | None:intergenic | 25.0% |
| !!! | TCTACATTTGAGTATTTTAG+TGG | - | chr6_1:1908894-1908913 | None:intergenic | 25.0% |
| ! | CAAATGTAGAGAATTATATG+TGG | + | chr6_1:1908904-1908923 | Msa0868410:intron | 25.0% |
| ! | CTCAAATGTAGAGAATTATA+TGG | - | chr6_1:1908902-1908921 | None:intergenic | 25.0% |
| ! | ATGGGTTTATATAGGTTTAA+TGG | + | chr6_1:1909110-1909129 | Msa0868410:intron | 25.0% |
| ! | TGGGTTTATATAGGTTTAAT+GGG | + | chr6_1:1909111-1909130 | Msa0868410:intron | 25.0% |
| ! | AACTTGAATGTGCAATATAT+GGG | - | chr6_1:1909147-1909166 | None:intergenic | 25.0% |
| ! | TAACTTGAATGTGCAATATA+TGG | - | chr6_1:1909148-1909167 | None:intergenic | 25.0% |
| !! | ACATTCAAGTTACTTTATCT+AGG | + | chr6_1:1909156-1909175 | Msa0868410:intron | 25.0% |
| ! | AATGTAAACCATACCTATAT+TGG | + | chr6_1:1909202-1909221 | Msa0868410:intron | 25.0% |
| ! | AGAAAAATCCAATATAGGTA+TGG | - | chr6_1:1909213-1909232 | None:intergenic | 25.0% |
| !!! | TATTTTTTGTGGATTCTCTT+AGG | + | chr6_1:1909318-1909337 | Msa0868410:intron | 25.0% |
| ! | ACTTGTACAAATTATCATGA+TGG | - | chr6_1:1909479-1909498 | None:intergenic | 25.0% |
| ! | TTTAATGTTGGAATTAGAGA+GGG | - | chr6_1:1909753-1909772 | None:intergenic | 25.0% |
| !! | TTTTAATGTTGGAATTAGAG+AGG | - | chr6_1:1909754-1909773 | None:intergenic | 25.0% |
| ! | CAGATATTCATAGGAATATA+CGG | + | chr6_1:1910176-1910195 | Msa0868410:intron | 25.0% |
| ! | ATTAACCTGAATTTAAACTC+AGG | - | chr6_1:1910258-1910277 | None:intergenic | 25.0% |
| !!! | ACTAATCATTCGAGTTTTAT+AGG | - | chr6_1:1910311-1910330 | None:intergenic | 25.0% |
| ! | TAAATGACAATACACAAAGT+GGG | - | chr6_1:1910504-1910523 | None:intergenic | 25.0% |
| ! | ATAAATGACAATACACAAAG+TGG | - | chr6_1:1910505-1910524 | None:intergenic | 25.0% |
| !! | TTATCCTTTTAAACAAAACC+AGG | - | chr6_1:1910556-1910575 | None:intergenic | 25.0% |
| !!! | ACACGGTAATTTTTTTATAG+TGG | + | chr6_1:1910606-1910625 | Msa0868410:intron | 25.0% |
| ! | AACAATGCATAAAATATGCA+AGG | - | chr6_1:1910651-1910670 | None:intergenic | 25.0% |
| !! | TGTATTTTACTGATATCCTT+TGG | + | chr6_1:1910800-1910819 | Msa0868410:intron | 25.0% |
| ! | AATACATCAACGAAAATTGA+TGG | + | chr6_1:1911116-1911135 | Msa0868410:intron | 25.0% |
| !!! | TATTAACGCTTTTTCTTGTA+AGG | + | chr6_1:1911182-1911201 | Msa0868410:intron | 25.0% |
| !! | ATATATAATTTAGAACTGCG+AGG | - | chr6_1:1911265-1911284 | None:intergenic | 25.0% |
| !! | AATGAAAAGTGTAGATTACA+TGG | + | chr6_1:1911648-1911667 | Msa0868410:intron | 25.0% |
| ! | GCATATATATTATGATCCAA+AGG | - | chr6_1:1912288-1912307 | None:intergenic | 25.0% |
| ! | GTTTGATGAAAAAAGGATAA+TGG | - | chr6_1:1912312-1912331 | None:intergenic | 25.0% |
| !!! | AAGCGTTGAAAAAATGTTTA+TGG | - | chr6_1:1912547-1912566 | None:intergenic | 25.0% |
| !! | ATGCGTTAGTGTTATATTTT+CGG | - | chr6_1:1912634-1912653 | None:intergenic | 25.0% |
| ! | AATTGTGAAAACAAATGGAT+TGG | + | chr6_1:1912732-1912751 | Msa0868410:CDS | 25.0% |
| ! | AATTGTCTTAAAATGACCAA+AGG | + | chr6_1:1912968-1912987 | Msa0868410:three_prime_UTR | 25.0% |
| ! | TCACACATTAAAATTTCCTT+TGG | - | chr6_1:1912987-1913006 | None:intergenic | 25.0% |
| AAAAATTTCCATTTCAACCG+TGG | - | chr6_1:1907716-1907735 | None:intergenic | 30.0% | |
| ACCATATTAATGTTCATAGG+TGG | + | chr6_1:1907760-1907779 | Msa0868410:CDS | 30.0% | |
| ACCACCTATGAACATTAATA+TGG | - | chr6_1:1907764-1907783 | None:intergenic | 30.0% | |
| GAATTTGATCAACAATGATG+GGG | - | chr6_1:1907879-1907898 | None:intergenic | 30.0% | |
| CTGAATTTGATCAACAATGA+TGG | - | chr6_1:1907881-1907900 | None:intergenic | 30.0% | |
| TTGATAAGGAAGTTATGTGA+AGG | - | chr6_1:1907933-1907952 | None:intergenic | 30.0% | |
| ! | CTCCATTTTATAGGTCTATT+TGG | + | chr6_1:1908057-1908076 | Msa0868410:CDS | 30.0% |
| CTCCAAATAGACCTATAAAA+TGG | - | chr6_1:1908062-1908081 | None:intergenic | 30.0% | |
| TTTAGTACTTGTTTAGCACT+AGG | - | chr6_1:1908108-1908127 | None:intergenic | 30.0% | |
| ! | ACAACCATGTTTTCATTTGT+TGG | - | chr6_1:1908204-1908223 | None:intergenic | 30.0% |
| CATATACAAAATCTCAAGCA+TGG | - | chr6_1:1908297-1908316 | None:intergenic | 30.0% | |
| ! | CATGCTTGAGATTTTGTATA+TGG | + | chr6_1:1908295-1908314 | Msa0868410:CDS | 30.0% |
| ! | GTATCTTTTGAACAATGTAG+AGG | + | chr6_1:1908353-1908372 | Msa0868410:CDS | 30.0% |
| ! | GTTACAAACACTTGTTACAT+GGG | + | chr6_1:1908382-1908401 | Msa0868410:CDS | 30.0% |
| GAAACACACTCTTTATCTTA+TGG | + | chr6_1:1908404-1908423 | Msa0868410:CDS | 30.0% | |
| ! | TATCTTATGGCTACTGTTTT+TGG | + | chr6_1:1908417-1908436 | Msa0868410:CDS | 30.0% |
| !! | ATCTTATGGCTACTGTTTTT+GGG | + | chr6_1:1908418-1908437 | Msa0868410:CDS | 30.0% |
| !!! | CTTTGTTTTGTCTAATGGAT+TGG | + | chr6_1:1908460-1908479 | Msa0868410:CDS | 30.0% |
| TTGCTTGTGATATAATTGAG+AGG | - | chr6_1:1908584-1908603 | None:intergenic | 30.0% | |
| TTAGGTATTCCCATTCAAAA+TGG | - | chr6_1:1908703-1908722 | None:intergenic | 30.0% | |
| TTCAACACACTTATTGTGTT+AGG | - | chr6_1:1908721-1908740 | None:intergenic | 30.0% | |
| ACACAATAAGTGTGTTGAAT+AGG | + | chr6_1:1908722-1908741 | Msa0868410:intron | 30.0% | |
| AATAAGTGTGTTGAATAGGT+AGG | + | chr6_1:1908726-1908745 | Msa0868410:intron | 30.0% | |
| !! | TTACTTTGGTTCTCTGTTTA+TGG | - | chr6_1:1909359-1909378 | None:intergenic | 30.0% |
| AAAGAGAGGAGAAAAAGTAA+CGG | + | chr6_1:1909575-1909594 | Msa0868410:CDS | 30.0% | |
| TTGAAGACATTGAAATTGAG+AGG | - | chr6_1:1909687-1909706 | None:intergenic | 30.0% | |
| TCCACATAACAGATATTCAT+AGG | + | chr6_1:1910167-1910186 | Msa0868410:intron | 30.0% | |
| TCCTATGAATATCTGTTATG+TGG | - | chr6_1:1910171-1910190 | None:intergenic | 30.0% | |
| TATACGGCTATTAAAAAGTG+CGG | + | chr6_1:1910192-1910211 | Msa0868410:intron | 30.0% | |
| CTTAACCTGAGTTTAAATTC+AGG | + | chr6_1:1910250-1910269 | Msa0868410:intron | 30.0% | |
| !!! | TAATTTTTTTATAGTGGCCG+AGG | + | chr6_1:1910612-1910631 | Msa0868410:intron | 30.0% |
| ! | ATTTTACTGATATCCTTTGG+TGG | + | chr6_1:1910803-1910822 | Msa0868410:intron | 30.0% |
| ! | AGAAAACTTTTATCCACCAA+AGG | - | chr6_1:1910819-1910838 | None:intergenic | 30.0% |
| AGATCTCATGAAGAATATGT+TGG | + | chr6_1:1910912-1910931 | Msa0868410:intron | 30.0% | |
| ! | TTTAGGTTTACCTTTATCTC+TGG | - | chr6_1:1911689-1911708 | None:intergenic | 30.0% |
| !!! | AACGAAGGAAGTACTTTTTT+AGG | - | chr6_1:1911706-1911725 | None:intergenic | 30.0% |
| ! | TTCCAAATTATACGACGTTT+TGG | + | chr6_1:1911724-1911743 | Msa0868410:intron | 30.0% |
| ! | TCCAAATTATACGACGTTTT+GGG | + | chr6_1:1911725-1911744 | Msa0868410:intron | 30.0% |
| !!! | GAGCAATTTTTAATTTGCGA+CGG | + | chr6_1:1911964-1911983 | Msa0868410:intron | 30.0% |
| AAAGAACCTCGAGATATATT+TGG | - | chr6_1:1912189-1912208 | None:intergenic | 30.0% | |
| GTTTAACGTTTGTACCATAT+TGG | + | chr6_1:1912211-1912230 | Msa0868410:intron | 30.0% | |
| ATATTATGATCCAAAGGACT+AGG | - | chr6_1:1912282-1912301 | None:intergenic | 30.0% | |
| ! | CTTAATTAAAAGCGTGTATG+TGG | + | chr6_1:1912331-1912350 | Msa0868410:intron | 30.0% |
| AGGCAAATTGTGAAAACAAA+TGG | + | chr6_1:1912727-1912746 | Msa0868410:CDS | 30.0% | |
| !! | AACAAATGGATTGGATTTGT+TGG | + | chr6_1:1912741-1912760 | Msa0868410:CDS | 30.0% |
| !! | CTTATACTTGTTATGTTGCT+TGG | + | chr6_1:1912792-1912811 | Msa0868410:CDS | 30.0% |
| ! | GAAATAAAGCTCTAACATGG+AGG | - | chr6_1:1907797-1907816 | None:intergenic | 35.0% |
| GTAGCACAAGTGAAAATTTG+AGG | + | chr6_1:1907983-1908002 | Msa0868410:CDS | 35.0% | |
| GTTTCAACATTTGCAAGTTG+TGG | + | chr6_1:1908171-1908190 | Msa0868410:CDS | 35.0% | |
| TCATTCCACAAGTACTTCTT+GGG | + | chr6_1:1908256-1908275 | Msa0868410:CDS | 35.0% | |
| TACAAAATCTCAAGCATGGA+GGG | - | chr6_1:1908293-1908312 | None:intergenic | 35.0% | |
| ATACAAAATCTCAAGCATGG+AGG | - | chr6_1:1908294-1908313 | None:intergenic | 35.0% | |
| ! | TCTTTTGAACAATGTAGAGG+AGG | + | chr6_1:1908356-1908375 | Msa0868410:CDS | 35.0% |
| ! | GGTTACAAACACTTGTTACA+TGG | + | chr6_1:1908381-1908400 | Msa0868410:CDS | 35.0% |
| !! | CTAATGGATTGGAATTCAGA+AGG | + | chr6_1:1908471-1908490 | Msa0868410:CDS | 35.0% |
| TGGAATTCAGAAGGTTTGAA+AGG | + | chr6_1:1908480-1908499 | Msa0868410:CDS | 35.0% | |
| GGAATTCAGAAGGTTTGAAA+GGG | + | chr6_1:1908481-1908500 | Msa0868410:CDS | 35.0% | |
| CGTGTCTTGAATTTATGCTT+TGG | - | chr6_1:1908542-1908561 | None:intergenic | 35.0% | |
| TGAGAGAAACTAACATCATG+AGG | - | chr6_1:1908623-1908642 | None:intergenic | 35.0% | |
| ! | TACTAGTTTGCATAACTGAG+AGG | + | chr6_1:1909643-1909662 | Msa0868410:CDS | 35.0% |
| AACTGAGAGGAAACAATTGA+AGG | + | chr6_1:1909656-1909675 | Msa0868410:CDS | 35.0% | |
| ! | ATATTGCTGTTGAAGTTGTC+AGG | + | chr6_1:1909706-1909725 | Msa0868410:CDS | 35.0% |
| CTAGGTTATCTATTGAGGAA+CGG | - | chr6_1:1909807-1909826 | None:intergenic | 35.0% | |
| GTCAACTAGGTTATCTATTG+AGG | - | chr6_1:1909812-1909831 | None:intergenic | 35.0% | |
| ! | ATACGGCTATTAAAAAGTGC+GGG | + | chr6_1:1910193-1910212 | Msa0868410:intron | 35.0% |
| !!! | TAATCCTAGCTGTCTTGTTT+TGG | - | chr6_1:1910466-1910485 | None:intergenic | 35.0% |
| !! | GCTACATGGATTAGAATGTA+TGG | - | chr6_1:1910534-1910553 | None:intergenic | 35.0% |
| TTAAACAAAACCAGGCTACA+TGG | - | chr6_1:1910548-1910567 | None:intergenic | 35.0% | |
| !!! | GTAGCCTGGTTTTGTTTAAA+AGG | + | chr6_1:1910549-1910568 | Msa0868410:intron | 35.0% |
| TGCATAAAATATGCAAGGTC+CGG | - | chr6_1:1910646-1910665 | None:intergenic | 35.0% | |
| GATCATTGAGATTACTCTCT+TGG | - | chr6_1:1910779-1910798 | None:intergenic | 35.0% | |
| AAGATTATCTTGCTAGCTAC+TGG | + | chr6_1:1911037-1911056 | Msa0868410:intron | 35.0% | |
| CATCAACGAAAATTGATGGA+TGG | + | chr6_1:1911120-1911139 | Msa0868410:intron | 35.0% | |
| !!! | CGCTTTTTCTTGTAAGGAAA+CGG | + | chr6_1:1911188-1911207 | Msa0868410:intron | 35.0% |
| GACGGAGATAGATTAAAAGT+TGG | + | chr6_1:1911982-1912001 | Msa0868410:intron | 35.0% | |
| TATAGGCCAAATATATCTCG+AGG | + | chr6_1:1912180-1912199 | Msa0868410:intron | 35.0% | |
| GTGGATGTCTATTTCAAAGT+TGG | + | chr6_1:1912350-1912369 | Msa0868410:intron | 35.0% | |
| ATTCATCGCTCTTGAAACTA+AGG | + | chr6_1:1912382-1912401 | Msa0868410:intron | 35.0% | |
| TCAGAACGTAGGATTTACTA+TGG | + | chr6_1:1912674-1912693 | Msa0868410:CDS | 35.0% | |
| CAGAACGTAGGATTTACTAT+GGG | + | chr6_1:1912675-1912694 | Msa0868410:CDS | 35.0% | |
| ! | TTGTTTTCACAATTTGCCTC+TGG | - | chr6_1:1912726-1912745 | None:intergenic | 35.0% |
| !! | GGATTGGATTTGTTGGAAAA+TGG | + | chr6_1:1912748-1912767 | Msa0868410:CDS | 35.0% |
| ATGAATCAGAGAAGTTTCCA+TGG | - | chr6_1:1912852-1912871 | None:intergenic | 35.0% | |
| CGAGTGCTATATGCTAATAA+AGG | + | chr6_1:1913041-1913060 | Msa0868410:three_prime_UTR | 35.0% | |
| TAGCACTAGGAATCATTGCA+AGG | - | chr6_1:1908095-1908114 | None:intergenic | 40.0% | |
| CTCATTCCACAAGTACTTCT+TGG | + | chr6_1:1908255-1908274 | Msa0868410:CDS | 40.0% | |
| TTGAACAATGTAGAGGAGGT+TGG | + | chr6_1:1908360-1908379 | Msa0868410:CDS | 40.0% | |
| AGCATAAATTCAAGACACGC+TGG | + | chr6_1:1908543-1908562 | Msa0868410:CDS | 40.0% | |
| !! | CTTTGGTTCTCTGTTTATGG+AGG | - | chr6_1:1909356-1909375 | None:intergenic | 40.0% |
| TACATGTGTCAGAGTCAACT+AGG | - | chr6_1:1909825-1909844 | None:intergenic | 40.0% | |
| CTAGGTCATCTATTGAGTGA+CGG | + | chr6_1:1910031-1910050 | Msa0868410:intron | 40.0% | |
| TGCGTGTACGATATTCATCT+TGG | + | chr6_1:1910421-1910440 | Msa0868410:intron | 40.0% | |
| TCAACCAAAACAAGACAGCT+AGG | + | chr6_1:1910459-1910478 | Msa0868410:intron | 40.0% | |
| ACATTCTAATCCATGTAGCC+TGG | + | chr6_1:1910535-1910554 | Msa0868410:intron | 40.0% | |
| CATAAAATATGCAAGGTCCG+GGG | - | chr6_1:1910644-1910663 | None:intergenic | 40.0% | |
| GCATAAAATATGCAAGGTCC+GGG | - | chr6_1:1910645-1910664 | None:intergenic | 40.0% | |
| GTGAGTTTAACTCAACTGGT+TGG | - | chr6_1:1910674-1910693 | None:intergenic | 40.0% | |
| ! | ACTCACGAGGACTTTTTACA+TGG | + | chr6_1:1910688-1910707 | Msa0868410:intron | 40.0% |
| ! | CGTCGTATAATTTGGAACGA+AGG | - | chr6_1:1911721-1911740 | None:intergenic | 40.0% |
| GCCCAAAACGTCGTATAATT+TGG | - | chr6_1:1911729-1911748 | None:intergenic | 40.0% | |
| TGACGTAAATCGAACGATGT+AGG | + | chr6_1:1912034-1912053 | Msa0868410:intron | 40.0% | |
| TGTTGGAAAATGGAGTGATG+AGG | + | chr6_1:1912758-1912777 | Msa0868410:CDS | 40.0% | |
| GTTGGAAAATGGAGTGATGA+GGG | + | chr6_1:1912759-1912778 | Msa0868410:CDS | 40.0% | |
| ACAGAGATGCAGATAATCCA+TGG | + | chr6_1:1912832-1912851 | Msa0868410:CDS | 40.0% | |
| TGTGAAATCGAAGCTGATGT+TGG | - | chr6_1:1912890-1912909 | None:intergenic | 40.0% | |
| ATTGCTACATTGCATGGAAG+TGG | - | chr6_1:1913020-1913039 | None:intergenic | 40.0% | |
| ACTCGAATTGCTACATTGCA+TGG | - | chr6_1:1913026-1913045 | None:intergenic | 40.0% | |
| !! | GTGTTCCCAAGAAGTACTTG+TGG | - | chr6_1:1908264-1908283 | None:intergenic | 45.0% |
| ACACGCTGGAGAAACTATTG+TGG | + | chr6_1:1908557-1908576 | Msa0868410:CDS | 45.0% | |
| CTCACACAAGTGCATATCCT+TGG | - | chr6_1:1908865-1908884 | None:intergenic | 45.0% | |
| !! | GATTCTCTTAGGAGCGTCAA+TGG | + | chr6_1:1909329-1909348 | Msa0868410:intron | 45.0% |
| TCATTCCTCCCTTGGAAAGA+CGG | + | chr6_1:1909516-1909535 | Msa0868410:CDS | 45.0% | |
| CTCACTGCTTTCTGACAATC+CGG | - | chr6_1:1909544-1909563 | None:intergenic | 45.0% | |
| GATTGTCAGAAAGCAGTGAG+AGG | + | chr6_1:1909544-1909563 | Msa0868410:CDS | 45.0% | |
| GAGAGGATGCAGAAAAAGAG+AGG | + | chr6_1:1909561-1909580 | Msa0868410:CDS | 45.0% | |
| GGTTATCTATTGAGGAACGG+AGG | - | chr6_1:1909804-1909823 | None:intergenic | 45.0% | |
| ! | GTCATCTATTGAGTGACGGA+GGG | + | chr6_1:1910035-1910054 | Msa0868410:intron | 45.0% |
| CCTCGTGAGTTTAACTCAAC+TGG | - | chr6_1:1910678-1910697 | None:intergenic | 45.0% | |
| CCAGTTGAGTTAAACTCACG+AGG | + | chr6_1:1910675-1910694 | Msa0868410:intron | 45.0% | |
| GACAGTGCATATCAGAACGT+AGG | + | chr6_1:1912663-1912682 | Msa0868410:intron | 45.0% | |
| !! | ATAATAATAATAATAATTAG+TGG | - | chr6_1:1908664-1908683 | None:intergenic | 5.0% |
| !!! | TTTTTTATTTTTATTTTTTG+TGG | + | chr6_1:1909307-1909326 | Msa0868410:intron | 5.0% |
| !! | AAAAAAAATTATGAAAAATA+TGG | + | chr6_1:1909887-1909906 | Msa0868410:intron | 5.0% |
| !! | TAAATAATTAATTGTATAAT+AGG | + | chr6_1:1911875-1911894 | Msa0868410:intron | 5.0% |
| GGAATGAGGTGTAAGGTGGA+AGG | - | chr6_1:1909503-1909522 | None:intergenic | 50.0% | |
| CAAGGGAGGAATGAGGTGTA+AGG | - | chr6_1:1909510-1909529 | None:intergenic | 50.0% | |
| CTTACACCTCATTCCTCCCT+TGG | + | chr6_1:1909508-1909527 | Msa0868410:CDS | 50.0% | |
| GTCTTTCCAAGGGAGGAATG+AGG | - | chr6_1:1909517-1909536 | None:intergenic | 50.0% | |
| ATCCGGATCCGTCTTTCCAA+GGG | - | chr6_1:1909527-1909546 | None:intergenic | 50.0% | |
| AATCCGGATCCGTCTTTCCA+AGG | - | chr6_1:1909528-1909547 | None:intergenic | 50.0% | |
| GGTCATCTATTGAGTGACGG+AGG | + | chr6_1:1910034-1910053 | Msa0868410:intron | 50.0% | |
| CAAGTGTGCACCTAGTCCTT+TGG | + | chr6_1:1912269-1912288 | Msa0868410:intron | 50.0% | |
| TGAACGACAGTTGCATCCAG+AGG | + | chr6_1:1912707-1912726 | Msa0868410:CDS | 50.0% | |
| GGGAGGAATGAGGTGTAAGG+TGG | - | chr6_1:1909507-1909526 | None:intergenic | 55.0% | |
| CTCCCTTGGAAAGACGGATC+CGG | + | chr6_1:1909522-1909541 | Msa0868410:CDS | 55.0% | |
| AAGGTCCGGGGTTCAAACCT+CGG | - | chr6_1:1910632-1910651 | None:intergenic | 55.0% | |
| CGGATCCGTCTTTCCAAGGG+AGG | - | chr6_1:1909524-1909543 | None:intergenic | 60.0% | |
| AGTGGCCGAGGTTTGAACCC+CGG | + | chr6_1:1910624-1910643 | Msa0868410:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_1 | gene | 1907709 | 1913123 | 1907709 | ID=Msa0868410;Name=Msa0868410 |
| chr6_1 | mRNA | 1907709 | 1913123 | 1907709 | ID=Msa0868410-mRNA-1;Parent=Msa0868410;Name=Msa0868410-mRNA-1;_AED=0.30;_eAED=0.30;_QI=0|0.5|0.33|1|1|1|3|257|442 |
| chr6_1 | exon | 1907709 | 1908608 | 1907709 | ID=Msa0868410-mRNA-1:exon:578;Parent=Msa0868410-mRNA-1 |
| chr6_1 | exon | 1909498 | 1909727 | 1909498 | ID=Msa0868410-mRNA-1:exon:579;Parent=Msa0868410-mRNA-1 |
| chr6_1 | exon | 1912668 | 1913123 | 1912668 | ID=Msa0868410-mRNA-1:exon:580;Parent=Msa0868410-mRNA-1 |
| chr6_1 | CDS | 1907709 | 1908608 | 1907709 | ID=Msa0868410-mRNA-1:cds;Parent=Msa0868410-mRNA-1 |
| chr6_1 | CDS | 1909498 | 1909727 | 1909498 | ID=Msa0868410-mRNA-1:cds;Parent=Msa0868410-mRNA-1 |
| chr6_1 | CDS | 1912668 | 1912866 | 1912668 | ID=Msa0868410-mRNA-1:cds;Parent=Msa0868410-mRNA-1 |
| chr6_1 | three_prime_UTR | 1912867 | 1913123 | 1912867 | ID=Msa0868410-mRNA-1:three_prime_utr;Parent=Msa0868410-mRNA-1 |
| Gene Sequence |
| Protein sequence |
