AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0871440

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0871440 MtrunA17_Chr6g0452721 90.192 938 13 3 305 1163 19 956 0.0 1712
Msa0871440 MtrunA17_Chr6g0452721 73.077 364 33 5 6 304 592 955 5.33e-156 490
Msa0871440 MtrunA17_Chr4g0059961 81.983 938 90 3 305 1163 21 958 0.0 1561
Msa0871440 MtrunA17_Chr4g0059961 67.033 364 55 6 6 304 594 957 9.67e-134 431
Msa0871440 MtrunA17_Chr4g0072131 72.098 939 176 5 305 1163 20 952 0.0 1397
Msa0871440 MtrunA17_Chr4g0072131 59.890 364 76 6 6 304 593 951 3.53e-122 400
Msa0871440 MtrunA17_Chr1g0148031 71.518 955 186 6 291 1163 1 951 0.0 1377
Msa0871440 MtrunA17_Chr1g0148031 61.813 364 71 5 6 304 590 950 9.44e-129 417
Msa0871440 MtrunA17_Chr3g0138931 70.366 955 197 6 291 1163 1 951 0.0 1368
Msa0871440 MtrunA17_Chr3g0138931 60.714 364 75 5 6 304 590 950 1.37e-125 409
Msa0871440 MtrunA17_Chr2g0333721 71.459 939 184 5 305 1163 15 949 0.0 1367
Msa0871440 MtrunA17_Chr2g0333721 61.264 364 73 6 6 304 588 948 9.34e-123 401
Msa0871440 MtrunA17_Chr2g0298031 71.626 941 181 6 305 1163 22 958 0.0 1357
Msa0871440 MtrunA17_Chr2g0298031 54.247 365 98 6 6 304 596 957 4.00e-99 337
Msa0871440 MtrunA17_Chr1g0147981 70.256 938 196 4 305 1163 34 967 0.0 1332
Msa0871440 MtrunA17_Chr1g0147981 58.402 363 84 4 6 304 607 966 1.06e-118 391
Msa0871440 MtrunA17_Chr4g0065481 69.936 938 196 5 305 1163 18 948 0.0 1327
Msa0871440 MtrunA17_Chr4g0065481 58.127 363 82 8 6 304 591 947 4.97e-109 364
Msa0871440 MtrunA17_Chr8g0365021 68.070 974 198 7 298 1163 75 1043 0.0 1316
Msa0871440 MtrunA17_Chr8g0365021 76.168 214 45 2 6 216 660 870 1.55e-91 317
Msa0871440 MtrunA17_Chr8g0365021 57.303 89 37 1 216 304 955 1042 9.54e-25 112
Msa0871440 MtrunA17_Chr8g0335291 69.442 949 199 6 305 1163 19 966 0.0 1305
Msa0871440 MtrunA17_Chr8g0335291 53.659 369 101 6 6 304 597 965 2.62e-93 321
Msa0871440 MtrunA17_Chr2g0304941 69.317 893 188 5 305 1118 18 903 0.0 1253
Msa0871440 MtrunA17_Chr2g0304941 77.982 218 34 4 6 216 591 801 2.75e-94 322
Msa0871440 MtrunA17_Chr7g0276551 69.693 716 181 6 475 1163 6 712 0.0 1028
Msa0871440 MtrunA17_Chr7g0276551 55.556 360 96 5 6 304 355 711 1.27e-108 356
Msa0871440 MtrunA17_Chr7g0276541 54.918 244 43 3 305 483 24 265 5.62e-73 244
Msa0871440 MtrunA17_Chr3g0134951 25.248 705 377 23 388 943 145 848 6.58e-40 160
Msa0871440 MtrunA17_Chr3g0134951 32.692 156 96 3 6 152 693 848 9.71e-15 79.3
Msa0871440 MtrunA17_Chr7g0263361 25.780 737 363 26 384 945 167 894 1.36e-34 144
Msa0871440 MtrunA17_Chr7g0263361 32.212 208 129 5 6 201 736 943 2.51e-12 71.6
Msa0871440 MtrunA17_Chr8g0381711 23.797 748 450 27 382 1022 142 876 6.32e-34 141
Msa0871440 MtrunA17_Chr4g0054021 24.518 571 338 17 388 869 183 749 9.10e-33 137
Msa0871440 MtrunA17_Chr7g0260401 25.000 612 339 26 386 883 263 868 1.60e-32 137
Msa0871440 MtrunA17_Chr5g0401211 25.835 569 327 19 388 865 258 822 1.30e-31 134
Msa0871440 MtrunA17_Chr4g0020551 23.590 585 327 20 387 865 187 757 2.18e-29 126
Msa0871440 MtrunA17_Chr8g0382071 24.352 579 328 21 387 865 254 822 4.28e-29 126
Msa0871440 MtrunA17_Chr1g0173111 23.776 572 338 18 387 865 253 819 8.65e-28 122
Msa0871440 MtrunA17_Chr6g0456201 21.417 607 340 20 387 872 236 826 9.11e-27 118
Msa0871440 MtrunA17_Chr2g0298871 23.355 608 344 21 387 883 295 891 1.05e-26 118
Msa0871440 MtrunA17_Chr3g0134771 23.570 577 331 20 388 865 259 824 8.26e-26 115
Msa0871440 MtrunA17_Chr4g0002331 23.471 605 347 20 387 883 308 904 6.10e-25 112
Msa0871440 MtrunA17_Chr5g0413881 63.636 77 27 1 613 688 6 82 1.20e-24 101
Msa0871440 MtrunA17_Chr8g0355421 22.971 579 349 20 387 872 247 821 1.36e-24 111
Msa0871440 MtrunA17_Chr5g0423831 50.000 92 39 1 613 704 55 139 2.35e-21 94.4
Msa0871440 MtrunA17_Chr8g0346461 31.071 280 150 7 704 948 619 890 1.29e-20 98.6
Msa0871440 MtrunA17_Chr8g0346461 27.232 224 117 5 388 565 157 380 4.63e-14 77.4
Msa0871440 MtrunA17_Chr8g0346461 31.707 164 102 3 6 159 731 894 3.83e-12 71.2
Msa0871440 MtrunA17_Chr6g0474841 47.826 92 41 1 613 704 55 139 4.61e-20 90.5
Msa0871440 MtrunA17_Chr3g0136331 24.627 536 321 18 387 882 362 854 2.37e-18 91.3
Msa0871440 MtrunA17_Chr1g0181471 67.925 53 17 0 677 729 29 81 1.60e-17 79.0
Msa0871440 MtrunA17_Chr2g0297051 23.596 534 291 18 388 865 494 966 2.24e-16 84.7
Msa0871440 MtrunA17_Chr8g0340261 23.973 292 172 10 625 872 93 378 7.26e-16 82.4
Msa0871440 MtrunA17_Chr8g0374391 29.947 187 110 4 703 886 34 202 7.06e-14 72.8
Msa0871440 MtrunA17_Chr8g0374331 29.947 187 110 4 703 886 41 209 8.01e-14 72.8
Msa0871440 MtrunA17_Chr4g0071991 23.221 534 328 18 387 894 216 693 3.37e-12 71.2
Msa0871440 MtrunA17_Chr5g0397621 34.375 128 73 3 762 886 741 860 3.69e-12 70.9
Msa0871440 MtrunA17_Chr8g0339181 37.815 119 67 3 772 886 811 926 1.00e-11 69.7
Msa0871440 MtrunA17_Chr4g0052521 32.479 117 74 2 773 886 842 956 4.90e-11 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0871440 AT5G62670.1 81.023 938 99 3 305 1163 19 956 0.0 1553
Msa0871440 AT5G62670.1 63.462 364 68 5 6 304 592 955 1.85e-127 414
Msa0871440 AT3G47950.1 80.917 938 100 3 305 1163 23 960 0.0 1549
Msa0871440 AT3G47950.1 64.286 364 65 6 6 304 596 959 5.39e-129 419
Msa0871440 AT3G47950.2 80.917 938 100 3 305 1163 23 960 0.0 1549
Msa0871440 AT3G47950.2 64.286 364 65 6 6 304 596 959 5.39e-129 419
Msa0871440 AT3G42640.1 71.535 938 181 6 305 1163 18 948 0.0 1367
Msa0871440 AT3G42640.1 58.402 363 81 9 6 304 591 947 1.36e-109 366
Msa0871440 AT2G24520.2 69.706 954 203 6 292 1163 45 994 0.0 1363
Msa0871440 AT2G24520.2 54.945 364 96 8 6 304 633 993 3.72e-100 341
Msa0871440 AT2G07560.1 70.789 938 189 6 305 1163 18 949 0.0 1363
Msa0871440 AT2G07560.1 60.055 363 77 9 6 304 590 948 8.87e-116 383
Msa0871440 AT2G24520.3 70.588 935 191 5 309 1163 1 931 0.0 1356
Msa0871440 AT2G24520.3 54.945 364 96 8 6 304 570 930 1.06e-100 341
Msa0871440 AT2G24520.1 70.588 935 191 5 309 1163 1 931 0.0 1356
Msa0871440 AT2G24520.1 54.945 364 96 8 6 304 570 930 1.06e-100 341
Msa0871440 AT4G30190.1 72.204 939 176 6 305 1163 15 948 0.0 1353
Msa0871440 AT4G30190.1 54.190 358 96 5 6 298 588 942 1.80e-94 324
Msa0871440 AT2G18960.1 70.934 953 193 5 291 1163 1 949 0.0 1353
Msa0871440 AT2G18960.1 56.557 366 87 7 6 304 588 948 2.58e-103 348
Msa0871440 AT5G57350.4 71.246 939 185 6 305 1163 16 949 0.0 1350
Msa0871440 AT5G57350.4 55.462 357 93 7 6 298 589 943 4.90e-99 337
Msa0871440 AT5G57350.2 71.246 939 185 6 305 1163 16 949 0.0 1350
Msa0871440 AT5G57350.2 55.462 357 93 7 6 298 589 943 4.90e-99 337
Msa0871440 AT5G57350.1 71.246 939 185 6 305 1163 16 949 0.0 1350
Msa0871440 AT5G57350.1 55.462 357 93 7 6 298 589 943 4.90e-99 337
Msa0871440 AT1G80660.1 70.288 939 195 5 305 1163 20 954 0.0 1338
Msa0871440 AT1G80660.1 55.220 364 95 8 6 304 593 953 8.61e-101 342
Msa0871440 AT4G30190.2 69.753 972 176 7 305 1163 15 981 0.0 1335
Msa0871440 AT4G30190.2 54.469 358 95 5 6 298 621 975 4.46e-95 327
Msa0871440 AT3G60330.4 68.249 948 208 8 305 1163 18 961 0.0 1316
Msa0871440 AT3G60330.4 53.699 365 96 7 6 297 588 952 3.36e-95 327
Msa0871440 AT3G60330.3 68.249 948 208 8 305 1163 18 961 0.0 1316
Msa0871440 AT3G60330.3 53.699 365 96 7 6 297 588 952 3.36e-95 327
Msa0871440 AT3G60330.2 68.038 948 210 8 305 1163 18 961 0.0 1314
Msa0871440 AT3G60330.2 53.699 365 96 7 6 297 588 952 3.36e-95 327
Msa0871440 AT3G60330.1 68.038 948 210 8 305 1163 18 961 0.0 1314
Msa0871440 AT3G60330.1 53.699 365 96 7 6 297 588 952 3.36e-95 327
Msa0871440 AT1G80660.3 70.110 910 188 5 305 1134 20 925 0.0 1292
Msa0871440 AT1G80660.3 54.464 336 85 7 6 276 593 925 1.74e-92 318
Msa0871440 AT1G80660.4 70.110 910 188 5 305 1134 20 925 0.0 1292
Msa0871440 AT1G80660.4 54.464 336 85 7 6 276 593 925 1.61e-92 318
Msa0871440 AT2G18960.3 71.991 889 165 5 355 1163 1 885 0.0 1278
Msa0871440 AT2G18960.3 56.557 366 87 7 6 304 524 884 7.84e-104 348
Msa0871440 AT2G18960.2 71.991 889 165 5 355 1163 1 885 0.0 1278
Msa0871440 AT2G18960.2 56.557 366 87 7 6 304 524 884 7.84e-104 348
Msa0871440 AT1G80660.2 74.720 803 172 4 388 1163 27 825 0.0 1249
Msa0871440 AT1G80660.2 55.220 364 95 8 6 304 464 824 6.65e-102 342
Msa0871440 AT1G17260.1 64.530 936 240 7 307 1163 25 947 0.0 1191
Msa0871440 AT1G17260.1 51.831 355 112 7 6 304 595 946 1.02e-93 322
Msa0871440 AT2G24520.4 73.555 692 152 4 499 1163 1 688 0.0 1049
Msa0871440 AT2G24520.4 54.945 364 96 8 6 304 327 687 8.28e-103 340
Msa0871440 AT5G57350.3 73.121 692 154 5 499 1163 1 687 0.0 1046
Msa0871440 AT5G57350.3 55.462 357 93 7 6 298 327 681 2.28e-101 336
Msa0871440 AT4G11730.1 46.098 833 293 19 305 1067 19 765 0.0 621
Msa0871440 AT4G11730.1 59.259 216 83 3 6 218 500 713 7.99e-62 227
Msa0871440 AT4G00900.2 25.906 745 355 29 388 948 155 886 6.21e-35 145
Msa0871440 AT4G00900.2 33.533 167 93 5 6 158 727 889 2.92e-12 72.0
Msa0871440 AT4G00900.1 25.906 745 355 29 388 948 155 886 6.21e-35 145
Msa0871440 AT4G00900.1 33.533 167 93 5 6 158 727 889 2.92e-12 72.0
Msa0871440 AT1G10130.1 26.716 539 306 22 618 1089 482 998 3.27e-32 136
Msa0871440 AT1G10130.1 33.750 160 89 5 6 152 692 847 1.07e-13 76.6
Msa0871440 AT1G10130.1 28.440 218 118 8 388 568 145 361 2.31e-11 68.9
Msa0871440 AT2G22950.1 24.000 575 331 18 388 865 258 823 6.32e-32 135
Msa0871440 AT3G22910.1 23.689 591 335 21 387 872 243 822 1.09e-31 135
Msa0871440 AT1G27770.4 24.315 584 342 20 388 876 259 837 1.89e-31 134
Msa0871440 AT1G27770.1 24.315 584 342 20 388 876 259 837 1.89e-31 134
Msa0871440 AT1G27770.3 24.476 572 333 19 388 865 196 762 3.40e-31 133
Msa0871440 AT4G37640.1 23.130 575 336 18 388 865 257 822 4.42e-31 132
Msa0871440 AT5G57110.1 24.426 610 332 22 387 883 276 869 1.26e-30 131
Msa0871440 AT5G57110.3 24.426 610 332 22 387 883 276 869 1.26e-30 131
Msa0871440 AT5G57110.2 24.426 610 332 22 387 883 276 869 1.26e-30 131
Msa0871440 AT4G29900.1 24.535 591 324 21 387 865 276 856 2.34e-29 127
Msa0871440 AT4G29900.2 24.535 591 324 21 387 865 276 856 2.34e-29 127
Msa0871440 AT3G57330.1 23.726 569 336 21 387 865 253 813 1.53e-26 118
Msa0871440 AT3G57330.2 23.726 569 336 21 387 865 198 758 1.83e-26 117
Msa0871440 AT3G63380.1 24.007 579 335 21 393 872 254 826 2.68e-26 117
Msa0871440 AT2G41560.1 23.427 572 337 21 387 865 253 816 2.59e-25 114
Msa0871440 AT2G41560.2 23.735 573 334 22 387 865 151 714 3.99e-25 113
Msa0871440 AT2G41560.3 23.735 573 334 22 387 865 151 714 3.99e-25 113
Msa0871440 AT2G41560.4 23.735 573 334 22 387 865 151 714 3.99e-25 113
Msa0871440 AT3G21180.1 22.613 597 327 21 387 865 290 869 2.26e-22 104
Msa0871440 AT1G07810.1 27.907 387 223 12 618 948 504 890 4.33e-22 103
Msa0871440 AT1G07810.1 30.769 208 132 5 6 201 731 938 3.88e-13 74.7
Msa0871440 AT1G07810.1 25.957 235 111 8 388 568 172 397 6.74e-13 73.9
Msa0871440 AT1G07670.2 28.571 392 214 13 618 948 504 890 5.78e-22 103
Msa0871440 AT1G07670.2 30.769 208 132 5 6 201 731 938 1.95e-13 75.9
Msa0871440 AT1G07670.2 25.957 235 111 8 388 568 172 397 6.24e-13 73.9
Msa0871440 AT1G07670.1 28.571 392 214 13 618 948 504 890 5.78e-22 103
Msa0871440 AT1G07670.1 30.769 208 132 5 6 201 731 938 1.95e-13 75.9
Msa0871440 AT1G07670.1 25.957 235 111 8 388 568 172 397 6.24e-13 73.9
Msa0871440 AT5G21930.2 23.507 536 328 16 387 882 353 846 2.72e-20 97.8
Msa0871440 AT5G21930.1 23.507 536 328 16 387 882 353 846 2.72e-20 97.8
Msa0871440 AT5G21930.3 23.664 524 319 17 387 882 353 823 7.63e-17 86.7
Msa0871440 AT1G27770.2 24.416 385 215 13 388 697 259 642 4.51e-16 84.3
Msa0871440 AT5G44790.1 23.540 548 319 20 388 885 467 964 6.83e-16 83.6
Msa0871440 AT1G63440.1 31.937 191 101 6 703 886 786 954 4.06e-15 81.3

Find 278 sgRNAs with CRISPR-Local

Find 833 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTACAAGGAAGAAAGATTT+TGG 0.160060 6_1:+6322847 Msa0871440:CDS
TTTACAAGGAAGAAAGATTT+TGG 0.160060 6_1:+6335139 Msa0871440:CDS
AATTATTCTTGGTGGTTATT+TGG 0.182909 6_1:+6321353 Msa0871440:CDS
GCTATAGATGCTGCTATTAT+AGG 0.211642 6_1:+6330838 Msa0871440:CDS
AGATAAAAGTATACCTCTTT+TGG 0.221054 6_1:-6330874 None:intergenic
AGGAAGAACGCGAACTTAAA+TGG 0.226632 6_1:+6322872 Msa0871440:CDS
AGGAAGAACGCGAACTTAAA+TGG 0.226632 6_1:+6335164 Msa0871440:CDS
CTGTGTAATTCTTCATTCTT+TGG 0.231219 6_1:-6320442 None:intergenic
CTGTGTAATTCTTCATTCTT+TGG 0.231219 6_1:-6332731 None:intergenic
AATTATTCTTGGTGGCTATT+TGG 0.240831 6_1:+6333639 Msa0871440:CDS
CAATTCCTTCATCCTTGTTC+TGG 0.245244 6_1:-6319860 None:intergenic
CAATTCCTTCATCCTTGTTC+TGG 0.245244 6_1:-6332148 None:intergenic
ACCGGAGTTCATACCTTCTT+TGG 0.270815 6_1:+6329912 Msa0871440:CDS
TTCACCACTGGAATTATTCT+TGG 0.278503 6_1:+6321342 Msa0871440:CDS
TTCACCACTGGAATTATTCT+TGG 0.278503 6_1:+6333628 Msa0871440:CDS
GAGGAGAGGTTGGCTATCTT+TGG 0.289972 6_1:+6328471 Msa0871440:CDS
AAACAGGTCCTAACTTCAAT+TGG 0.308835 6_1:+6330121 Msa0871440:intron
CCCAGTGACAGTGTTTATTC+AGG 0.322417 6_1:+6329846 Msa0871440:CDS
GCTCTTAAGAAAGCAGATAT+TGG 0.323411 6_1:+6320308 Msa0871440:CDS
GCTCTTAAGAAAGCAGATAT+TGG 0.323411 6_1:+6332597 Msa0871440:CDS
TCTGCCAGCTTCCAGCTATC+TGG 0.324706 6_1:-6321315 None:intergenic
TCTGCCAGCTTCCAGCTATC+TGG 0.324706 6_1:-6333601 None:intergenic
GTGACCGCGTTACAAATATA+AGG 0.333271 6_1:-6321783 None:intergenic
GTGACCGCGTTACAAATATA+AGG 0.333271 6_1:-6334070 None:intergenic
ACAGCTTGGTTTCATGTTAC+TGG 0.335735 6_1:+6320669 Msa0871440:intron
ACAGCTTGGTTTCATGTTAC+TGG 0.335735 6_1:+6332956 Msa0871440:intron
CGGTTGTAGTCTGCACTTAC+AGG 0.336796 6_1:+6329798 Msa0871440:intron
GTTTGAAACACTTCCTCAAT+TGG 0.340289 6_1:-6328408 None:intergenic
TACAATTATGACAATATCTA+AGG 0.346291 6_1:+6321269 Msa0871440:CDS
TACAATTATGACAATATCTA+AGG 0.346291 6_1:+6333555 Msa0871440:CDS
GTAAATGTTAAAATGATAAC+AGG 0.346451 6_1:+6319610 Msa0871440:five_prime_UTR
AAAAGTTCCCAATTGAAGTT+AGG 0.347133 6_1:-6330129 None:intergenic
ATGTATTGAGTGGCCGGGCT+TGG 0.365634 6_1:+6334827 Msa0871440:CDS
TAGAGAGTTGCACACACTTA+AGG 0.366581 6_1:+6335474 Msa0871440:CDS
AGCTTCCAGCTATCTGGATA+TGG 0.370436 6_1:-6321309 None:intergenic
AGCTTCCAGCTATCTGGATA+TGG 0.370436 6_1:-6333595 None:intergenic
TGGCTTTCTTTCTTTCCATC+AGG 0.370843 6_1:-6319493 None:intergenic
TGGCTTTCTTTCTTTCCATC+AGG 0.370843 6_1:-6331781 None:intergenic
TTCAGGCTCTACATGCAAAC+AGG 0.371019 6_1:+6329863 Msa0871440:CDS
GGGATTGGATGGGGTTGGGC+TGG 0.372644 6_1:+6334739 Msa0871440:CDS
GGAAGACCTTGGCAGTTTAT+CGG 0.380792 6_1:+6319517 Msa0871440:five_prime_UTR
GGAAGACCTTGGCAGTTTAT+CGG 0.380792 6_1:+6331805 Msa0871440:CDS
AATCTACTTGTGCTTCTCAT+TGG 0.384442 6_1:+6330238 Msa0871440:CDS
TCATGTTACTGGCACTCATA+TGG 0.386168 6_1:+6320680 Msa0871440:CDS
TCATGTTACTGGCACTCATA+TGG 0.386168 6_1:+6332967 Msa0871440:CDS
TACCCTTCATCAGCTTTATT+AGG 0.388189 6_1:+6319837 Msa0871440:five_prime_UTR
TACCCTTCATCAGCTTTATT+AGG 0.388189 6_1:+6332125 Msa0871440:CDS
AGCAATCATGGCTATTGCTT+TGG 0.388777 6_1:+6328956 Msa0871440:CDS
AAAACTCCAGTTTGCATAAA+CGG 0.394312 6_1:-6334704 None:intergenic
TGTATTGAGTGGCCGGGCTT+GGG 0.395791 6_1:+6334828 Msa0871440:CDS
TGAAGGGATTGGATGGGGTT+GGG 0.398444 6_1:+6334735 Msa0871440:CDS
GCGGATGCTCGTTTACTTGA+AGG 0.400028 6_1:+6329665 Msa0871440:CDS
CCGTTGTTCTCATGGCTGCT+CGG 0.401363 6_1:+6330791 Msa0871440:CDS
GGGGTTGGGCTGGTATTGTT+TGG 0.402084 6_1:+6334749 Msa0871440:CDS
TGATTGCCGTTTATGCAAAC+TGG 0.403293 6_1:+6334698 Msa0871440:CDS
GAAGCAGTTGTTATTGCAAC+CGG 0.405843 6_1:+6329894 Msa0871440:CDS
CTATAGATGCTGCTATTATA+GGG 0.408529 6_1:+6330839 Msa0871440:CDS
TGTCTAGGTGGGTCGAATAA+AGG 0.409705 6_1:-6319547 None:intergenic
TGTCTAGGTGGGTCGAATAA+AGG 0.409705 6_1:-6331835 None:intergenic
CGCAGATACCGTTGTTCTCA+TGG 0.409745 6_1:+6330783 Msa0871440:CDS
AGAGAGTTGCACACACTTAA+GGG 0.414696 6_1:+6335475 Msa0871440:CDS
GGAAGAACGCGAACTTAAAT+GGG 0.418448 6_1:+6322873 Msa0871440:CDS
GGAAGAACGCGAACTTAAAT+GGG 0.418448 6_1:+6335165 Msa0871440:CDS
GAAGACCTTGGCAGTTTATC+GGG 0.419371 6_1:+6319518 Msa0871440:five_prime_UTR
GAAGACCTTGGCAGTTTATC+GGG 0.419371 6_1:+6331806 Msa0871440:CDS
GACTAATTGTACTAACTTGT+AGG 0.425640 6_1:-6321756 None:intergenic
GACTAATTGTACTAACTTGT+AGG 0.425640 6_1:-6334043 None:intergenic
CAGAACAAGGATGAAGGAAT+TGG 0.430435 6_1:+6319861 Msa0871440:five_prime_UTR
CAGAACAAGGATGAAGGAAT+TGG 0.430435 6_1:+6332149 Msa0871440:CDS
ATTATTGCTATTCTTAATGA+TGG 0.431040 6_1:+6320733 Msa0871440:CDS
ATTATTGCTATTCTTAATGA+TGG 0.431040 6_1:+6333020 Msa0871440:CDS
TCGTGAAACGTTTGCAAGCT+AGG 0.431221 6_1:+6320241 Msa0871440:five_prime_UTR
TCGTGAAACGTTTGCAAGCT+AGG 0.431221 6_1:+6332529 Msa0871440:CDS
CTGCAATTGAAGGGATTGGA+TGG 0.435038 6_1:+6334728 Msa0871440:CDS
CAGCAAAGGTGCACCGGAGC+AGG 0.439813 6_1:+6331462 Msa0871440:CDS
GCCTGAATAAACACTGTCAC+TGG 0.440032 6_1:-6329847 None:intergenic
CCGCTTGTCAGTAGGATTGA+AGG 0.441619 6_1:-6331395 None:intergenic
TCGCTGAACATCTTGGTCTC+TGG 0.452631 6_1:-6322931 None:intergenic
TCGCTGAACATCTTGGTCTC+TGG 0.452631 6_1:-6335223 None:intergenic
TTCGATATGTATTGAGTGGC+CGG 0.452893 6_1:+6334821 Msa0871440:CDS
CCGACGAAGTCTTGCCAATC+GGG 0.455072 6_1:-6329316 None:intergenic
CGTTGTTCTCATGGCTGCTC+GGG 0.455110 6_1:+6330792 Msa0871440:CDS
TCTTTGGAATATTGCTCGAC+TGG 0.456373 6_1:-6320426 None:intergenic
TCTTTGGAATATTGCTCGAC+TGG 0.456373 6_1:-6332715 None:intergenic
AAAATGCCCGACTTGATTTG+TGG 0.456751 6_1:-6329958 None:intergenic
ACCACTGGAATTATTCTTGG+TGG 0.459114 6_1:+6321345 Msa0871440:CDS
ACCACTGGAATTATTCTTGG+TGG 0.459142 6_1:+6333631 Msa0871440:CDS
TTTGCTGCAATTGAAGGGAT+TGG 0.460251 6_1:+6334724 Msa0871440:CDS
AACAGGTCCTAACTTCAATT+GGG 0.464044 6_1:+6330122 Msa0871440:intron
CTATCAATAGCGAAAGAAAC+AGG 0.465607 6_1:+6319786 Msa0871440:five_prime_UTR
CTATCAATAGCGAAAGAAAC+AGG 0.465607 6_1:+6332074 Msa0871440:CDS
ATCACACCGCTTAGCTCAGC+AGG 0.468037 6_1:+6330312 Msa0871440:CDS
CTACTTGTGCTTCTCATTGG+AGG 0.470393 6_1:+6330241 Msa0871440:CDS
TTGTAACGCGGTCACGGAGC+TGG 0.472572 6_1:+6321791 Msa0871440:CDS
TTGTAACGCGGTCACGGAGC+TGG 0.472572 6_1:+6334078 Msa0871440:CDS
ATGGCTATTGCTTTGGCCAA+TGG 0.472871 6_1:+6328963 Msa0871440:CDS
TGTGCGTTCGCTGAACATCT+TGG 0.474953 6_1:-6322938 None:intergenic
TGTGCGTTCGCTGAACATCT+TGG 0.474953 6_1:-6335230 None:intergenic
AGGAAGTGTTTCAAACTTTG+AGG 0.475521 6_1:+6328415 Msa0871440:CDS
GATGGAAGCTGCAGCAATCA+TGG 0.476351 6_1:+6328944 Msa0871440:CDS
TCAAATCATCAACTGGTAAG+AGG 0.477216 6_1:-6319884 None:intergenic
TCAAATCATCAACTGGTAAG+AGG 0.477216 6_1:-6332172 None:intergenic
TTATGTGGAATCCTCTCTCA+TGG 0.477803 6_1:+6328919 Msa0871440:CDS
TAGCAGCATCTATAGCATCT+TGG 0.482236 6_1:-6330831 None:intergenic
TTGAAGGGATTGGATGGGGT+TGG 0.483582 6_1:+6334734 Msa0871440:CDS
ATCGATAAATTTGCCGAGCG+AGG 0.483664 6_1:+6331623 Msa0871440:CDS
CATGCGCAAAGAACACTTCA+TGG 0.485207 6_1:+6322898 Msa0871440:CDS
CATGCGCAAAGAACACTTCA+TGG 0.485207 6_1:+6335190 Msa0871440:CDS
TAAACTGCCAAGGTCTTCCT+TGG 0.485975 6_1:-6319513 None:intergenic
TAAACTGCCAAGGTCTTCCT+TGG 0.485975 6_1:-6331801 None:intergenic
ATATCTGCTTTCTTAAGAGC+AGG 0.486559 6_1:-6320305 None:intergenic
ATATCTGCTTTCTTAAGAGC+AGG 0.486559 6_1:-6332594 None:intergenic
AGAACTGTAGGCATGGCAAT+AGG 0.487318 6_1:-6330268 None:intergenic
ACCGACGAAGTCTTGCCAAT+CGG 0.487944 6_1:-6329317 None:intergenic
AATAGAAGAGATGGCGGGTA+TGG 0.488349 6_1:+6330580 Msa0871440:intron
TGACCGCGTTACAAATATAA+GGG 0.488531 6_1:-6321782 None:intergenic
TGACCGCGTTACAAATATAA+GGG 0.488531 6_1:-6334069 None:intergenic
TGAGTCAGTTGTTAGAATGA+AGG 0.489867 6_1:+6323209 Msa0871440:CDS
TGAGTCAGTTGTTAGAATGA+AGG 0.489867 6_1:+6335504 Msa0871440:CDS
ATAAGTAGGGCATTAAATCT+TGG 0.491483 6_1:+6319586 Msa0871440:five_prime_UTR
GCAATAATCAGTACCATGAA+TGG 0.491716 6_1:-6320718 None:intergenic
GCAATAATCAGTACCATGAA+TGG 0.491716 6_1:-6333005 None:intergenic
ACAAGTTAGTACAATTAGTC+AGG 0.493434 6_1:+6321759 Msa0871440:CDS
ACAAGTTAGTACAATTAGTC+AGG 0.493434 6_1:+6334046 Msa0871440:CDS
GTCTCTTGCTGTAGCCTACC+AGG 0.493769 6_1:+6319364 None:intergenic
GTCTCTTGCTGTAGCCTACC+AGG 0.493769 6_1:+6331652 Msa0871440:CDS
AAAGAAACAGGACGCCGTCT+AGG 0.493787 6_1:+6319798 Msa0871440:five_prime_UTR
AAAGAAACAGGACGCCGTCT+AGG 0.493787 6_1:+6332086 Msa0871440:CDS
TTATATTTGTAACGCGGTCA+CGG 0.495775 6_1:+6321785 Msa0871440:CDS
TTATATTTGTAACGCGGTCA+CGG 0.495775 6_1:+6334072 Msa0871440:CDS
AACAGGACGCCGTCTAGGAA+TGG 0.496195 6_1:+6319803 Msa0871440:five_prime_UTR
AACAGGACGCCGTCTAGGAA+TGG 0.496195 6_1:+6332091 Msa0871440:CDS
ACAGGACGCCGTCTAGGAAT+GGG 0.500151 6_1:+6319804 Msa0871440:five_prime_UTR
ACAGGACGCCGTCTAGGAAT+GGG 0.500151 6_1:+6332092 Msa0871440:CDS
GTATTGTGCAGTGACAAAAC+TGG 0.500312 6_1:+6330605 Msa0871440:CDS
TCAGGAAAATGTGCCAATTG+AGG 0.501745 6_1:+6328395 Msa0871440:intron
TCAAGTCTTCAGAAGAGGAT+AGG 0.503976 6_1:+6321701 Msa0871440:CDS
CTGAACATCTTGGTCTCTGG+CGG 0.504462 6_1:-6322928 None:intergenic
CTGAACATCTTGGTCTCTGG+CGG 0.504462 6_1:-6335220 None:intergenic
TCCGAAAATTAGGCAAGGGC+TGG 0.508108 6_1:+6331349 Msa0871440:intron
TCGGAAGCTTACTCCTCCAT+TGG 0.510345 6_1:-6328979 None:intergenic
TGTTGACAAGAATCTTATTG+AGG 0.510437 6_1:+6330652 Msa0871440:CDS
AAAAGCTGCTGAGGAGAGGT+TGG 0.514396 6_1:+6328461 Msa0871440:CDS
TCGATAAATTTGCCGAGCGA+GGG 0.514954 6_1:+6331624 Msa0871440:CDS
TGGCCTAATAAAGCTGATGA+AGG 0.520382 6_1:-6319840 None:intergenic
TGGCCTAATAAAGCTGATGA+AGG 0.520382 6_1:-6332128 None:intergenic
CTGTCAGTTACAATGGCAAT+CGG 0.520728 6_1:+6330289 Msa0871440:CDS
CAAGTCTTCAGAAGAGGATA+GGG 0.522538 6_1:+6321702 Msa0871440:CDS
CAAGTCTTCAGAAAGAGGAT+AGG 0.527365 6_1:+6333988 Msa0871440:CDS
TGCAATTGAAGGGATTGGAT+GGG 0.527417 6_1:+6334729 Msa0871440:CDS
TCAAGTAAACGAGCATCCGC+AGG 0.533069 6_1:-6329662 None:intergenic
ACTTTGAGGTGTGATTCAAA+TGG 0.534258 6_1:+6328429 Msa0871440:CDS
CATCTCCATATCCAGATAGC+TGG 0.535373 6_1:+6321304 Msa0871440:CDS
CATCTCCATATCCAGATAGC+TGG 0.535373 6_1:+6333590 Msa0871440:CDS
TCGTGTCAGCAAAGGTGCAC+CGG 0.535676 6_1:+6331456 Msa0871440:CDS
AAGTCTTCAGAAAGAGGATA+GGG 0.535901 6_1:+6333989 Msa0871440:CDS
TGATCCGTTGAAGATTGATC+AGG 0.537179 6_1:+6329688 Msa0871440:CDS
AAGAGACCGCAACCCTCGCT+CGG 0.537570 6_1:-6331636 None:intergenic
TGTATATGTTCAATTGCTGT+GGG 0.538145 6_1:+6330151 Msa0871440:CDS
CAGCTATCTGGATATGGAGA+TGG 0.538271 6_1:-6321303 None:intergenic
CAGCTATCTGGATATGGAGA+TGG 0.538271 6_1:-6333589 None:intergenic
CGCTTGTCAGTAGGATTGAA+GGG 0.540375 6_1:-6331394 None:intergenic
TTAGGCCAGAACAAGGATGA+AGG 0.541544 6_1:+6319855 Msa0871440:five_prime_UTR
TTAGGCCAGAACAAGGATGA+AGG 0.541544 6_1:+6332143 Msa0871440:CDS
AGTTCATACCTTCTTTGGCA+AGG 0.542004 6_1:+6329917 Msa0871440:CDS
GAATCCTCTCTCATGGGTGA+TGG 0.543395 6_1:+6328926 Msa0871440:CDS
TTGTATATGTTCAATTGCTG+TGG 0.544457 6_1:+6330150 Msa0871440:CDS
TTTAGAATAAACCACCCGAT+TGG 0.545064 6_1:+6329302 Msa0871440:intron
CAACACCGAAAATATCGTCC+AGG 0.545951 6_1:+6330208 Msa0871440:CDS
ATGAGCAGCCTTGCCAAAGA+AGG 0.546678 6_1:-6329925 None:intergenic
CTGGCAGAGATCTTCACCAC+TGG 0.546867 6_1:+6321330 Msa0871440:CDS
CTGGCAGAGATCTTCACCAC+TGG 0.546867 6_1:+6333616 Msa0871440:CDS
ACTTACAGGTGAGTCTCTTC+CGG 0.546957 6_1:+6329812 Msa0871440:CDS
GAGTCAGTTGTTAGAATGAA+GGG 0.547589 6_1:+6323210 Msa0871440:CDS
GAGTCAGTTGTTAGAATGAA+GGG 0.547589 6_1:+6335505 Msa0871440:CDS
TGAACATCTTGGTCTCTGGC+GGG 0.548033 6_1:-6322927 None:intergenic
TGAACATCTTGGTCTCTGGC+GGG 0.548033 6_1:-6335219 None:intergenic
GCAATTGAAGGGATTGGATG+GGG 0.549639 6_1:+6334730 Msa0871440:CDS
TCGACTCCACAAATCAAGTC+GGG 0.549673 6_1:+6329952 Msa0871440:CDS
TTATATAACTTACTACAATA+CGG 0.549937 6_1:-6320576 None:intergenic
TTATATAACTTACTACAATA+CGG 0.549937 6_1:-6332865 None:intergenic
CAACAAACTTGAGGAGAAGC+AGG 0.550958 6_1:+6328497 Msa0871440:CDS
TAGAGAGTTGCACACACTCA+AGG 0.554758 6_1:+6323179 Msa0871440:CDS
GCTGCTATTATAGGGATGCT+AGG 0.555095 6_1:+6330847 Msa0871440:CDS
ATATCCAGATAGCTGGAAGC+TGG 0.555818 6_1:+6321311 Msa0871440:CDS
ATATCCAGATAGCTGGAAGC+TGG 0.555818 6_1:+6333597 Msa0871440:CDS
ATAGTGCAGAGACGATAAGT+AGG 0.559205 6_1:+6319572 Msa0871440:five_prime_UTR
ATTTCTCAGGAAGTTCCTGA+TGG 0.561899 6_1:+6319478 Msa0871440:intron
ATTTCTCAGGAAGTTCCTGA+TGG 0.561899 6_1:+6331766 Msa0871440:intron
TCGATATGTATTGAGTGGCC+GGG 0.565768 6_1:+6334822 Msa0871440:CDS
GGTCTCAAGTCTTCAGAAAG+AGG 0.568054 6_1:+6333983 Msa0871440:CDS
AAGAAAGCCAAGGAAGACCT+TGG 0.569690 6_1:+6319506 Msa0871440:five_prime_UTR
AAGAAAGCCAAGGAAGACCT+TGG 0.569690 6_1:+6331794 Msa0871440:CDS
GTCTCTGCACTATCATGTCT+AGG 0.570571 6_1:-6319562 None:intergenic
GTCTCTGCACTATCATGTCT+AGG 0.570571 6_1:-6331850 None:intergenic
GCTATTGCTTTGGCCAATGG+AGG 0.574253 6_1:+6328966 Msa0871440:CDS
GATATAATTAGTGTTAAGCT+AGG 0.575911 6_1:+6329629 Msa0871440:CDS
TACAGTTCTGTCAGTTACAA+TGG 0.576813 6_1:+6330282 Msa0871440:CDS
CTGCACTATCATGTCTAGGT+GGG 0.578575 6_1:-6319558 None:intergenic
CTGCACTATCATGTCTAGGT+GGG 0.578575 6_1:-6331846 None:intergenic
CAAGCTAGGAAACACATATG+TGG 0.579952 6_1:+6320255 Msa0871440:exon
CAAGCTAGGAAACACATATG+TGG 0.579952 6_1:+6332543 Msa0871440:CDS
GATAAGAAAGATACCTGCTC+CGG 0.581935 6_1:-6331475 None:intergenic
TTATACAGAGCTTAATCAGA+TGG 0.582493 6_1:+6322963 Msa0871440:CDS
TTATACAGAGCTTAATCAGA+TGG 0.582493 6_1:+6335255 Msa0871440:CDS
GGGTATCAAGTCTTCAGAAG+AGG 0.583176 6_1:+6321696 Msa0871440:CDS
AGCATCATTAACACCATCAC+CGG 0.586529 6_1:-6332571 None:intergenic
CCTGAATAAACACTGTCACT+GGG 0.587779 6_1:-6329846 None:intergenic
TCTGCACTATCATGTCTAGG+TGG 0.589479 6_1:-6319559 None:intergenic
TCTGCACTATCATGTCTAGG+TGG 0.589479 6_1:-6331847 None:intergenic
AGAGCTGTCCGCTTGTCAGT+AGG 0.589819 6_1:-6331403 None:intergenic
GACATTGTTCTAACAGAACC+AGG 0.590210 6_1:+6320374 Msa0871440:CDS
GACATTGTTCTAACAGAACC+AGG 0.590210 6_1:+6332663 Msa0871440:CDS
CTTTGGTCACAACAAACTTG+AGG 0.591192 6_1:+6328488 Msa0871440:CDS
CAACAAAAGCTGCTGAGGAG+AGG 0.592632 6_1:+6328457 Msa0871440:CDS
GGCTGCTCGGGCTTCCAGAG+TGG 0.595254 6_1:+6330804 Msa0871440:CDS
GAGTCTCTTCCGGTCACGAA+AGG 0.597950 6_1:+6329822 Msa0871440:CDS
GCCAAAGAAGGTATGAACTC+CGG 0.600679 6_1:-6329913 None:intergenic
AAACACATATGTGGAATGAC+CGG 0.600729 6_1:+6332552 Msa0871440:CDS
AGCTTTATTAGGCCAGAACA+AGG 0.601027 6_1:+6319848 Msa0871440:five_prime_UTR
AGCTTTATTAGGCCAGAACA+AGG 0.601027 6_1:+6332136 Msa0871440:CDS
AGAGAGTTGCACACACTCAA+GGG 0.602510 6_1:+6323180 Msa0871440:CDS
GGCAAGGGCTGGTATTCAAG+AGG 0.604638 6_1:+6331360 Msa0871440:intron
ATTGTAACTGACAGAACTGT+AGG 0.607606 6_1:-6330280 None:intergenic
ATGACCTTGATAAAATCAAG+TGG 0.609010 6_1:-6334796 None:intergenic
ACTCTCAACAAAAGCTGCTG+AGG 0.609053 6_1:+6328452 Msa0871440:CDS
AACTGACAGAACTGTAGGCA+TGG 0.609587 6_1:-6330275 None:intergenic
ACAAGTAGATTATCAATCCC+TGG 0.610553 6_1:-6330226 None:intergenic
GATGCTAGGTGATCCAAAAG+AGG 0.610581 6_1:+6330861 Msa0871440:CDS
GTCGACTCCACAAATCAAGT+CGG 0.610771 6_1:+6329951 Msa0871440:CDS
GGCCTAATAAAGCTGATGAA+GGG 0.611297 6_1:-6319839 None:intergenic
GGCCTAATAAAGCTGATGAA+GGG 0.611297 6_1:-6332127 None:intergenic
ATAATCAGTACCATGAATGG+TGG 0.613663 6_1:-6320715 None:intergenic
ATAATCAGTACCATGAATGG+TGG 0.613663 6_1:-6333002 None:intergenic
TATGTGGAATCCTCTCTCAT+GGG 0.616529 6_1:+6328920 Msa0871440:CDS
AAAATGCATCGTGTCAGCAA+AGG 0.617045 6_1:+6331448 Msa0871440:CDS
TTCTAACAACTGACTCAACA+TGG 0.622284 6_1:-6323203 None:intergenic
TTCTAACAACTGACTCAACA+TGG 0.622284 6_1:-6335498 None:intergenic
TGCACCTGATCAATCTTCAA+CGG 0.622286 6_1:-6329692 None:intergenic
AACTTGTAGGTATATTGCTG+AGG 0.623813 6_1:-6321743 None:intergenic
AACTTGTAGGTATATTGCTG+AGG 0.623813 6_1:-6334030 None:intergenic
TGTTAGTTCCCATTCCTAGA+CGG 0.624630 6_1:-6319812 None:intergenic
TGTTAGTTCCCATTCCTAGA+CGG 0.624630 6_1:-6332100 None:intergenic
TATTGCTCGACTGGTCAGCA+CGG 0.628408 6_1:-6320417 None:intergenic
TATTGCTCGACTGGTCAGCA+CGG 0.628408 6_1:-6332706 None:intergenic
GCTTCCATCACCCATGAGAG+AGG 0.629828 6_1:-6328930 None:intergenic
ATAATTCGATATGTATTGAG+TGG 0.631653 6_1:+6334817 Msa0871440:CDS
AATTTGCCGAGCGAGGGTTG+CGG 0.634870 6_1:+6331630 Msa0871440:CDS
CCTTCAATCCTACTGACAAG+CGG 0.635026 6_1:+6331395 Msa0871440:CDS
TAGTGCAGAGACGATAAGTA+GGG 0.635142 6_1:+6319573 Msa0871440:five_prime_UTR
TGGTTCTGTTAGAACAATGT+CGG 0.638365 6_1:-6320372 None:intergenic
TGGTTCTGTTAGAACAATGT+CGG 0.638365 6_1:-6332661 None:intergenic
CTAATGATAACACTGAGACC+TGG 0.638435 6_1:-6320392 None:intergenic
CTAATGATAACACTGAGACC+TGG 0.638435 6_1:-6332681 None:intergenic
ATATGAAACATATACCTGGT+AGG 0.642335 6_1:-6319378 None:intergenic
ATATGAAACATATACCTGGT+AGG 0.642335 6_1:-6331666 None:intergenic
ATATGTGGAATGACCGGTGA+TGG 0.646343 6_1:+6332558 Msa0871440:CDS
AACACCGAAAATATCGTCCA+GGG 0.647523 6_1:+6330209 Msa0871440:CDS
ACGAAGTCTTGCCAATCGGG+TGG 0.655034 6_1:-6329313 None:intergenic
TGTCTACCTGCTGAGCTAAG+CGG 0.655328 6_1:-6330318 None:intergenic
ACAGCAATAGAAGAGATGGC+GGG 0.657057 6_1:+6330575 Msa0871440:intron
ATGAGCCCGATAAACTGCCA+AGG 0.659711 6_1:-6319523 None:intergenic
ATGAGCCCGATAAACTGCCA+AGG 0.659711 6_1:-6331811 None:intergenic
CAAGTAAACGAGCATCCGCA+GGG 0.659972 6_1:-6329661 None:intergenic
TCAGGCTCTACATGCAAACA+GGG 0.668111 6_1:+6329864 Msa0871440:CDS
CCCGATTGGCAAGACTTCGT+CGG 0.669725 6_1:+6329316 Msa0871440:CDS
GATGGAAAGAAAGAAAGCCA+AGG 0.670475 6_1:+6319496 Msa0871440:five_prime_UTR
GATGGAAAGAAAGAAAGCCA+AGG 0.670475 6_1:+6331784 Msa0871440:CDS
GCCACCAAGAATAATTCCAG+TGG 0.672710 6_1:-6333632 None:intergenic
ACCACCAAGAATAATTCCAG+TGG 0.684497 6_1:-6321346 None:intergenic
GAGCATCATTAACACCATCA+CGG 0.700918 6_1:-6320283 None:intergenic
AGGCCCTTATATTTGTAACG+CGG 0.707964 6_1:+6321779 Msa0871440:CDS
AGGCCCTTATATTTGTAACG+CGG 0.707964 6_1:+6334066 Msa0871440:CDS
GCTGCTACAAGTAACAAACC+CGG 0.711018 6_1:-6321829 None:intergenic
GCTGCTACAAGTAACAAACC+CGG 0.711018 6_1:-6334116 None:intergenic
CCGAGCAGCCATGAGAACAA+CGG 0.711310 6_1:-6330791 None:intergenic
GCTAGGTGATATTATCCCTG+CGG 0.716733 6_1:+6329646 Msa0871440:CDS
CATATGTGGAATGACCGTGA+TGG 0.786950 6_1:+6320269 Msa0871440:exon

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTAATTTTTTTTTTAAAATT+TGG + chr6_1:6328149-6328168 Msa0871440:intron 0.0%
!!! TTTTCTATGTTTATTTATTT+GGG - chr6_1:6323933-6323952 None:intergenic 10.0%
!! GAAAAAAAAAAAAAAAACTT+TGG + chr6_1:6324847-6324866 Msa0871440:intron 10.0%
!! TATAGTCATATATATTTATA+TGG + chr6_1:6326796-6326815 Msa0871440:intron 10.0%
!! ATAGTCATATATATTTATAT+GGG + chr6_1:6326797-6326816 Msa0871440:intron 10.0%
!!! TTTTTTTTTAATGAATTATG+TGG + chr6_1:6328224-6328243 Msa0871440:intron 10.0%
!! TAATACTCTTAATTATATTT+AGG + chr6_1:6329553-6329572 Msa0871440:intron 10.0%
!! TTAAATATGTAATAACATAT+TGG + chr6_1:6331191-6331210 Msa0871440:intron 10.0%
!!! AAAGAAAATAATTGATTTAA+AGG + chr6_1:6335347-6335366 Msa0871440:intron 10.0%
!!! AAGAAAATAATTGATTTAAA+GGG + chr6_1:6335348-6335367 Msa0871440:intron 10.0%
!! TTATATAACTTACTACAATA+CGG - chr6_1:6320579-6320598 None:intergenic 15.0%
!! ATATTAAGTGAATAATATCA+AGG - chr6_1:6320959-6320978 None:intergenic 15.0%
!! AAAAAATTGATTAAAAAGAC+AGG - chr6_1:6321207-6321226 None:intergenic 15.0%
!! TTATAACATTGTTATATTCA+TGG - chr6_1:6322360-6322379 None:intergenic 15.0%
!!! AGAGAAAAATATTGATTTAA+AGG + chr6_1:6323053-6323072 Msa0871440:intron 15.0%
!!! GTTTTCTATGTTTATTTATT+TGG - chr6_1:6323934-6323953 None:intergenic 15.0%
!! TAACATTAAAATTGGAATAT+GGG - chr6_1:6324062-6324081 None:intergenic 15.0%
!!! ATTTCTTTTAAATTTCATGT+AGG - chr6_1:6324797-6324816 None:intergenic 15.0%
!!! AGAAATTAAGTTTTTAACTT+TGG + chr6_1:6324811-6324830 Msa0871440:intron 15.0%
!! GAAAAAAATTAAAGTTGTAT+TGG - chr6_1:6325165-6325184 None:intergenic 15.0%
!!! TCTTAAACCATTTTAAAAAA+TGG + chr6_1:6325606-6325625 Msa0871440:intron 15.0%
!!! AATTCTTCCATTTTTTAAAA+TGG - chr6_1:6325616-6325635 None:intergenic 15.0%
!!! TTAGGTTTGATTTTAATAAT+TGG - chr6_1:6326365-6326384 None:intergenic 15.0%
!!! TTAGTCCATTTATTTATTTT+GGG - chr6_1:6327452-6327471 None:intergenic 15.0%
!! ACATTAATAATATCATAAAG+TGG - chr6_1:6327521-6327540 None:intergenic 15.0%
!! AATGTACTATCTATTAATTA+AGG + chr6_1:6327553-6327572 Msa0871440:intron 15.0%
!! ATGTACTATCTATTAATTAA+GGG + chr6_1:6327554-6327573 Msa0871440:intron 15.0%
!!! TTCAAGACATAATTTTTTTA+TGG - chr6_1:6327619-6327638 None:intergenic 15.0%
!!! CTTTGTATATCTATATATTT+TGG + chr6_1:6327918-6327937 Msa0871440:intron 15.0%
!!! GAGTTTATTTTTGATATTTT+TGG + chr6_1:6328262-6328281 Msa0871440:intron 15.0%
!!! AATAAATAAGTAAAAGTGTT+CGG - chr6_1:6329001-6329020 None:intergenic 15.0%
!!! TTTTTATAGATTTTTGCTAA+AGG + chr6_1:6330754-6330773 Msa0871440:intron 15.0%
!!! TGTTTTTTCACAATAATTTA+TGG - chr6_1:6332309-6332328 None:intergenic 15.0%
!!! TTTGAAATATTAATAATGTG+AGG - chr6_1:6333157-6333176 None:intergenic 15.0%
!! ATATTAAGTGAATAATATCA+AGG - chr6_1:6320959-6320978 None:intergenic 15.0%
!! AAAAAATTGATTAAAAAGAC+AGG - chr6_1:6321207-6321226 None:intergenic 15.0%
!! TTATAACATTGTTATATTCA+TGG - chr6_1:6322360-6322379 None:intergenic 15.0%
!! TTTCTTTATATAGATAATGT+GGG - chr6_1:6335330-6335349 None:intergenic 15.0%
!! GTAAATGTTAAAATGATAAC+AGG + chr6_1:6319610-6319629 Msa0871440:five_prime_UTR 20.0%
!! AATGTACTTAAATTTCTTCT+AGG + chr6_1:6319756-6319775 Msa0871440:intron 20.0%
!!! CTGTTTTTCACAATAATTTA+TGG - chr6_1:6320021-6320040 None:intergenic 20.0%
!!! ATTATTGCTATTCTTAATGA+TGG + chr6_1:6320733-6320752 Msa0871440:CDS 20.0%
!! TATAGTCTCTACAAATAATA+AGG + chr6_1:6321016-6321035 Msa0871440:intron 20.0%
!! ATAGTCTCTACAAATAATAA+GGG + chr6_1:6321017-6321036 Msa0871440:intron 20.0%
!! TACAATTATGACAATATCTA+AGG + chr6_1:6321269-6321288 Msa0871440:CDS 20.0%
!! AAATGAAAATGTTTCTTACA+GGG - chr6_1:6321429-6321448 None:intergenic 20.0%
!! AAAATGAAAATGTTTCTTAC+AGG - chr6_1:6321430-6321449 None:intergenic 20.0%
!! ATTAGTTCATTGAAATTGAT+CGG - chr6_1:6322078-6322097 None:intergenic 20.0%
!!! TTGAATGTTAAGTTATTTTG+TGG + chr6_1:6322176-6322195 Msa0871440:intron 20.0%
!! CAATGTTATAATATCTTCTT+TGG + chr6_1:6322369-6322388 Msa0871440:intron 20.0%
!!! TTAAGTTGTTTATTCAAACA+TGG + chr6_1:6322757-6322776 Msa0871440:intron 20.0%
!! TCTCTTTATATAGATAATGT+GGG - chr6_1:6323038-6323057 None:intergenic 20.0%
!! TTCTCTTTATATAGATAATG+TGG - chr6_1:6323039-6323058 None:intergenic 20.0%
!!! AATATTGATTTAAAGGCTTA+TGG + chr6_1:6323060-6323079 Msa0871440:intron 20.0%
!! CTCTCATATTAAAACTTTAA+GGG - chr6_1:6323766-6323785 None:intergenic 20.0%
!! TCTCTCATATTAAAACTTTA+AGG - chr6_1:6323767-6323786 None:intergenic 20.0%
!! AATGAATATGAATCATTGTT+AGG - chr6_1:6323836-6323855 None:intergenic 20.0%
!!! ATTTTGGGATTATGATTTTA+GGG - chr6_1:6323966-6323985 None:intergenic 20.0%
!! GTAACATTAAAATTGGAATA+TGG - chr6_1:6324063-6324082 None:intergenic 20.0%
!!! TTTGTCATTTTTGTTTACTT+TGG - chr6_1:6324160-6324179 None:intergenic 20.0%
!! AAAATGACAAACATTATCAT+AGG + chr6_1:6324169-6324188 Msa0871440:intron 20.0%
!! TCGAATATTTGTATGTAAAT+TGG + chr6_1:6324357-6324376 Msa0871440:intron 20.0%
!!! AAGGACTTTGTTTTTTAAAA+GGG - chr6_1:6324988-6325007 None:intergenic 20.0%
!!! AAAGGACTTTGTTTTTTAAA+AGG - chr6_1:6324989-6325008 None:intergenic 20.0%
!!! ATTTTGCTTGTATGTATATA+CGG + chr6_1:6325024-6325043 Msa0871440:intron 20.0%
!!! CATTTTGAAACAAATGTTTT+TGG - chr6_1:6325124-6325143 None:intergenic 20.0%
!!! GTTTGTCTTTTCTAATAATA+AGG + chr6_1:6325240-6325259 Msa0871440:intron 20.0%
!!! AAATTCAGGTTTATTTGAAA+TGG - chr6_1:6325535-6325554 None:intergenic 20.0%
!! ATTATGTAAACAACAAATTC+AGG - chr6_1:6325549-6325568 None:intergenic 20.0%
!! ATTTCTTAAAATACCAACTA+AGG - chr6_1:6325734-6325753 None:intergenic 20.0%
!! ATATTTGTTTCAAAAGAAAG+AGG - chr6_1:6326245-6326264 None:intergenic 20.0%
!! ATTAGTATTATAGCAAAGTT+AGG - chr6_1:6326383-6326402 None:intergenic 20.0%
!!! TCGCTTTTATTATTTCTTTA+TGG + chr6_1:6326837-6326856 Msa0871440:intron 20.0%
!! AAATAGTAAGTTAATGATCT+TGG + chr6_1:6326895-6326914 Msa0871440:intron 20.0%
!!! TGTTGTAATTTAAAATGTGT+GGG - chr6_1:6327135-6327154 None:intergenic 20.0%
!!! TTCAACACAACTTTTTTAAA+TGG + chr6_1:6327236-6327255 Msa0871440:intron 20.0%
!!! CATTTATTTATTTTGGGTAT+GGG - chr6_1:6327446-6327465 None:intergenic 20.0%
!!! GTTAGTCCATTTATTTATTT+TGG - chr6_1:6327453-6327472 None:intergenic 20.0%
!! TATAAGAGATATTCACATAA+AGG + chr6_1:6327994-6328013 Msa0871440:intron 20.0%
!!! TTTTTAATGAATTATGTGGT+TGG + chr6_1:6328228-6328247 Msa0871440:intron 20.0%
!!! TTCTAGTTTTTGTTTGATTA+TGG + chr6_1:6328316-6328335 Msa0871440:intron 20.0%
!!! GAAAAAAAAGATCTTTTAAG+AGG - chr6_1:6328574-6328593 None:intergenic 20.0%
!! CATATCATACATTAACATAA+GGG - chr6_1:6328596-6328615 None:intergenic 20.0%
!! TCATATCATACATTAACATA+AGG - chr6_1:6328597-6328616 None:intergenic 20.0%
!!! GAGAATATTTATTTTGATCA+TGG + chr6_1:6329027-6329046 Msa0871440:intron 20.0%
!! CTTAGTTATCAACAAATTAA+TGG - chr6_1:6329763-6329782 None:intergenic 20.0%
!!! ACAAAAAGCATAAATGATAT+AGG - chr6_1:6330523-6330542 None:intergenic 20.0%
!!! AATAGTAAGTTTTTGTAATG+CGG + chr6_1:6330680-6330699 Msa0871440:intron 20.0%
!! TATTAACACAAACAATTACT+TGG - chr6_1:6331503-6331522 None:intergenic 20.0%
!! GTAAATGTTAAAATGATAAC+AGG + chr6_1:6319610-6319629 Msa0871440:five_prime_UTR 20.0%
!! AATGTACTTAAATTTCTTCT+AGG + chr6_1:6319756-6319775 Msa0871440:intron 20.0%
!!! ATTATTGCTATTCTTAATGA+TGG + chr6_1:6320733-6320752 Msa0871440:CDS 20.0%
!! TATAGTCTCTACAAATAATA+AGG + chr6_1:6321016-6321035 Msa0871440:intron 20.0%
!! ATAGTCTCTACAAATAATAA+GGG + chr6_1:6321017-6321036 Msa0871440:intron 20.0%
!! TACAATTATGACAATATCTA+AGG + chr6_1:6321269-6321288 Msa0871440:CDS 20.0%
!! AAATGAAAATGTTTCTTACA+GGG - chr6_1:6321429-6321448 None:intergenic 20.0%
!! AAAATGAAAATGTTTCTTAC+AGG - chr6_1:6321430-6321449 None:intergenic 20.0%
!! ATTAGTTCATTGAAATTGAT+CGG - chr6_1:6322078-6322097 None:intergenic 20.0%
!!! TTGAATGTTAAGTTATTTTG+TGG + chr6_1:6322176-6322195 Msa0871440:intron 20.0%
!! CAATGTTATAATATCTTCTT+TGG + chr6_1:6322369-6322388 Msa0871440:intron 20.0%
!! TATCAGTTAAATTACAGTAA+GGG + chr6_1:6334888-6334907 Msa0871440:intron 20.0%
!!! TTAAGTTGTTTATTCAAACA+TGG + chr6_1:6322757-6322776 Msa0871440:intron 20.0%
!! CTTTCTTTATATAGATAATG+TGG - chr6_1:6335331-6335350 None:intergenic 20.0%
!! ATCATTATATCCTATTTCTC+AGG + chr6_1:6319465-6319484 Msa0871440:intron 25.0%
!! TTTTCAATCAAATCATCAAC+TGG - chr6_1:6319894-6319913 None:intergenic 25.0%
! GAAAGGAAAAATATTATACC+AGG - chr6_1:6319942-6319961 None:intergenic 25.0%
! TACTAAGAATTTACAGAGAA+AGG - chr6_1:6319959-6319978 None:intergenic 25.0%
!!! TTTGAAATATTGATAATGCG+AGG - chr6_1:6320870-6320889 None:intergenic 25.0%
!! TACAACATTTTGTAATTCCA+GGG - chr6_1:6320898-6320917 None:intergenic 25.0%
!! TTACAACATTTTGTAATTCC+AGG - chr6_1:6320899-6320918 None:intergenic 25.0%
! GAAATTGCAAAATATTGATC+AGG - chr6_1:6321052-6321071 None:intergenic 25.0%
!!! TAGAATATTGATAATGCTTG+AGG + chr6_1:6321083-6321102 Msa0871440:intron 25.0%
!!! AATTTAGTTCTTGCTATTGT+AGG - chr6_1:6321124-6321143 None:intergenic 25.0%
! TACAATAGCAAGAACTAAAT+TGG + chr6_1:6321123-6321142 Msa0871440:intron 25.0%
! ACAATAGCAAGAACTAAATT+GGG + chr6_1:6321124-6321143 Msa0871440:intron 25.0%
!! TGACATTAATTAGTCTGTAA+CGG - chr6_1:6321181-6321200 None:intergenic 25.0%
! TATGATTTCTTGAATATGTC+AGG + chr6_1:6321246-6321265 Msa0871440:intron 25.0%
!! AATTATTCTTGGTGGTTATT+TGG + chr6_1:6321353-6321372 Msa0871440:CDS 25.0%
!!! ATGACAGTCATTTTCTTTTT+GGG + chr6_1:6321381-6321400 Msa0871440:intron 25.0%
!! GTTTAATTTCTATACACAGT+CGG - chr6_1:6321554-6321573 None:intergenic 25.0%
! GTGAATATAACCATGTTTAT+CGG + chr6_1:6321916-6321935 Msa0871440:intron 25.0%
!! TATTCCACTTGATTTTATCA+AGG + chr6_1:6322503-6322522 Msa0871440:intron 25.0%
! ATAATTCGATATGTATTGAG+TGG + chr6_1:6322528-6322547 Msa0871440:intron 25.0%
! TCTATCAGTAAATTACAGTA+AGG + chr6_1:6322597-6322616 Msa0871440:intron 25.0%
! CTATCAGTAAATTACAGTAA+GGG + chr6_1:6322598-6322617 Msa0871440:intron 25.0%
! GTTATAAGTTGTTAGAGAAA+TGG + chr6_1:6322689-6322708 Msa0871440:intron 25.0%
!!! ATTTTCAGATTGCTTTTACA+AGG + chr6_1:6322833-6322852 Msa0871440:intron 25.0%
!! TTTACAAGGAAGAAAGATTT+TGG + chr6_1:6322847-6322866 Msa0871440:CDS 25.0%
! CCATTAATAATTTGAGAGAA+TGG - chr6_1:6323401-6323420 None:intergenic 25.0%
! CCATTCTCTCAAATTATTAA+TGG + chr6_1:6323398-6323417 Msa0871440:intron 25.0%
!!! AAACTTTAAGGGTTTGTTAA+CGG - chr6_1:6323755-6323774 None:intergenic 25.0%
!!! AGAGAAACTAGTACTTTTTT+TGG + chr6_1:6323782-6323801 Msa0871440:intron 25.0%
! AATGCTACAACTATAATGAA+CGG + chr6_1:6323874-6323893 Msa0871440:intron 25.0%
! CTATGTTTATTTATTTGGGA+GGG - chr6_1:6323929-6323948 None:intergenic 25.0%
! TCTATGTTTATTTATTTGGG+AGG - chr6_1:6323930-6323949 None:intergenic 25.0%
!!! CATTTTGGGATTATGATTTT+AGG - chr6_1:6323967-6323986 None:intergenic 25.0%
!! AATGAATCTTTGTGCATTTT+GGG - chr6_1:6323981-6324000 None:intergenic 25.0%
!!! TTACTTTGGTTCCATTTTAT+TGG - chr6_1:6324146-6324165 None:intergenic 25.0%
!!! AAGTTGATGGAACATAAAAA+TGG + chr6_1:6324244-6324263 Msa0871440:intron 25.0%
!! ATACTTTGAACCATTTTGTT+GGG + chr6_1:6324270-6324289 Msa0871440:intron 25.0%
!! CAACATTCACAATTTCATTT+TGG - chr6_1:6324475-6324494 None:intergenic 25.0%
! AATTGAAGATAGATAGAAGA+TGG + chr6_1:6324496-6324515 Msa0871440:intron 25.0%
! CATCATGAAAATGAAATCAA+AGG - chr6_1:6324639-6324658 None:intergenic 25.0%
! AAAGGGAATGAAATAATCAT+TGG - chr6_1:6325290-6325309 None:intergenic 25.0%
! TGAATTATCACCCATAAATA+TGG + chr6_1:6325574-6325593 Msa0871440:intron 25.0%
! GAATTATCACCCATAAATAT+GGG + chr6_1:6325575-6325594 Msa0871440:intron 25.0%
! ACGATTAATCCCATATTTAT+GGG - chr6_1:6325587-6325606 None:intergenic 25.0%
! TGAGATGAAAAAATAGTCAT+AGG - chr6_1:6325777-6325796 None:intergenic 25.0%
!! GTGTTTAAGATTTAAGGTTA+TGG - chr6_1:6326131-6326150 None:intergenic 25.0%
!!! TTGAGAGTGTTTAAGATTTA+AGG - chr6_1:6326137-6326156 None:intergenic 25.0%
! AGGGAGAAAAAGATAATATA+AGG - chr6_1:6326207-6326226 None:intergenic 25.0%
!!! CTTGTTATGAGACTAATTTT+TGG - chr6_1:6326303-6326322 None:intergenic 25.0%
! ACTATTTATTGAATCTGCAA+CGG - chr6_1:6326724-6326743 None:intergenic 25.0%
! GCAAGGTTTATATTTAATCT+TGG - chr6_1:6326933-6326952 None:intergenic 25.0%
!! AGTCAGTAACATAGTTTTTA+GGG - chr6_1:6327022-6327041 None:intergenic 25.0%
!! AAGTCAGTAACATAGTTTTT+AGG - chr6_1:6327023-6327042 None:intergenic 25.0%
!! CTGTTGTAATTTAAAATGTG+TGG - chr6_1:6327136-6327155 None:intergenic 25.0%
!! CACACATTTTAAATTACAAC+AGG + chr6_1:6327134-6327153 Msa0871440:intron 25.0%
! ATGGGACACTAAATTTATAT+GGG - chr6_1:6327297-6327316 None:intergenic 25.0%
!!! GATTGGTTTAAAATTCACAT+GGG - chr6_1:6327320-6327339 None:intergenic 25.0%
!!! TGATTGGTTTAAAATTCACA+TGG - chr6_1:6327321-6327340 None:intergenic 25.0%
!!! CCATTTATTTATTTTGGGTA+TGG - chr6_1:6327447-6327466 None:intergenic 25.0%
! CCATACCCAAAATAAATAAA+TGG + chr6_1:6327444-6327463 Msa0871440:intron 25.0%
! TTATGTGAAACATGTGATAT+AGG - chr6_1:6327475-6327494 None:intergenic 25.0%
!! CACTCAATTGCTATTATTAA+TGG - chr6_1:6327713-6327732 None:intergenic 25.0%
! CATTAATAATAGCAATTGAG+TGG + chr6_1:6327711-6327730 Msa0871440:intron 25.0%
!!! AGAAATGAGTGTTTTTTTCT+TGG - chr6_1:6328118-6328137 None:intergenic 25.0%
! ATGAAGTGTATATACTACAT+AGG - chr6_1:6328622-6328641 None:intergenic 25.0%
! ACACTAGTAATTTGAGAAAA+TGG - chr6_1:6328707-6328726 None:intergenic 25.0%
!!! TTCACCTTTTTAGTATTTTG+TGG + chr6_1:6328839-6328858 Msa0871440:intron 25.0%
! AAAGCCACAAAATACTAAAA+AGG - chr6_1:6328846-6328865 None:intergenic 25.0%
!!! AAGCAAGTTTTTGAAGTTTT+TGG + chr6_1:6328893-6328912 Msa0871440:CDS 25.0%
!!! AGCAAGTTTTTGAAGTTTTT+GGG + chr6_1:6328894-6328913 Msa0871440:CDS 25.0%
!!! TTGATCATGGTTTTAAATTG+CGG + chr6_1:6329040-6329059 Msa0871440:intron 25.0%
!!! CTTTTAGAAATAGTTGTAGA+AGG + chr6_1:6329227-6329246 Msa0871440:intron 25.0%
! GATATAATTAGTGTTAAGCT+AGG + chr6_1:6329629-6329648 Msa0871440:CDS 25.0%
!!! TTTCTCTCGTTTTTCTATAT+CGG + chr6_1:6329727-6329746 Msa0871440:intron 25.0%
!!! TTTGTTGATAACTAAGATTC+TGG + chr6_1:6329767-6329786 Msa0871440:intron 25.0%
!!! ATAACTAAGATTCTGGTTTT+CGG + chr6_1:6329774-6329793 Msa0871440:intron 25.0%
! ATTGATACTTAGCATTACTT+TGG + chr6_1:6330091-6330110 Msa0871440:intron 25.0%
! TTGATACTTAGCATTACTTT+GGG + chr6_1:6330092-6330111 Msa0871440:intron 25.0%
! CTATTGATATAAGTACTTGT+GGG - chr6_1:6330470-6330489 None:intergenic 25.0%
! TCTATTGATATAAGTACTTG+TGG - chr6_1:6330471-6330490 None:intergenic 25.0%
! AACATTAAAACACTTTCTGT+AGG - chr6_1:6330731-6330750 None:intergenic 25.0%
!!! AGATAAAAGTATACCTCTTT+TGG - chr6_1:6330877-6330896 None:intergenic 25.0%
!!! CTATAGTTTTTTGTGTCAAT+AGG + chr6_1:6330950-6330969 Msa0871440:intron 25.0%
!! ATCATTATATCCTATTTCTC+AGG + chr6_1:6319465-6319484 Msa0871440:intron 25.0%
!! TTTTCAATCAAATCATCAAC+TGG - chr6_1:6319894-6319913 None:intergenic 25.0%
! GAAAGGAAAAATATTATACC+AGG - chr6_1:6319942-6319961 None:intergenic 25.0%
! TACTAAGAATTTACAGAGAA+AGG - chr6_1:6319959-6319978 None:intergenic 25.0%
! ATATTAATAATGTGAGGACT+AGG - chr6_1:6333151-6333170 None:intergenic 25.0%
! TAATATTTCAAAATGATCCC+TGG + chr6_1:6333165-6333184 Msa0871440:intron 25.0%
!! TACAACATTTTGTAATTCCA+GGG - chr6_1:6320898-6320917 None:intergenic 25.0%
!! TTACAACATTTTGTAATTCC+AGG - chr6_1:6320899-6320918 None:intergenic 25.0%
! GAAATTGCAAAATATTGATC+AGG - chr6_1:6321052-6321071 None:intergenic 25.0%
!!! TAGAATATTGATAATGCTTG+AGG + chr6_1:6321083-6321102 Msa0871440:intron 25.0%
!!! AATTTAGTTCTTGCTATTGT+AGG - chr6_1:6321124-6321143 None:intergenic 25.0%
! TACAATAGCAAGAACTAAAT+TGG + chr6_1:6321123-6321142 Msa0871440:intron 25.0%
! ACAATAGCAAGAACTAAATT+GGG + chr6_1:6321124-6321143 Msa0871440:intron 25.0%
!! TGACATTAATTAGTCTGTAA+CGG - chr6_1:6321181-6321200 None:intergenic 25.0%
! TATGATTTCTTGAATATGTC+AGG + chr6_1:6321246-6321265 Msa0871440:intron 25.0%
!! GTTTAATTTCTATACACAGT+CGG - chr6_1:6321554-6321573 None:intergenic 25.0%
! GTGAATATAACCATGTTTAT+CGG + chr6_1:6321916-6321935 Msa0871440:intron 25.0%
!! TATTCCACTTGATTTTATCA+AGG + chr6_1:6322503-6322522 Msa0871440:intron 25.0%
! ATAATTCGATATGTATTGAG+TGG + chr6_1:6322528-6322547 Msa0871440:intron 25.0%
! CTATCAGTTAAATTACAGTA+AGG + chr6_1:6334887-6334906 Msa0871440:intron 25.0%
!!! ATTTTCAGATTGCTTTTACA+AGG + chr6_1:6322833-6322852 Msa0871440:intron 25.0%
!! TTTACAAGGAAGAAAGATTT+TGG + chr6_1:6322847-6322866 Msa0871440:CDS 25.0%
!! TAATTGATTTAAAGGGCATA+TGG + chr6_1:6335355-6335374 Msa0871440:intron 25.0%
ATATGAAACATATACCTGGT+AGG - chr6_1:6319381-6319400 None:intergenic 30.0%
! TGAGCAAATTCAAGTTACAT+TGG + chr6_1:6319421-6319440 Msa0871440:intron 30.0%
! ATAAGTAGGGCATTAAATCT+TGG + chr6_1:6319586-6319605 Msa0871440:five_prime_UTR 30.0%
TTAATATGTTTCGCACTACT+CGG + chr6_1:6319709-6319728 Msa0871440:intron 30.0%
GATTTGATTGAAAAAGCTGA+TGG + chr6_1:6319900-6319919 Msa0871440:five_prime_UTR 30.0%
TATTATACCAGGAAAAACAC+CGG - chr6_1:6319931-6319950 None:intergenic 30.0%
TCCACACATCAATATAATAG+CGG + chr6_1:6319981-6320000 Msa0871440:intron 30.0%
AAGTACACTTTACGTTTACA+AGG + chr6_1:6320102-6320121 Msa0871440:intron 30.0%
CTGTGTAATTCTTCATTCTT+TGG - chr6_1:6320445-6320464 None:intergenic 30.0%
TTGATGTTAGAACTGAAAGT+AGG - chr6_1:6320472-6320491 None:intergenic 30.0%
! CTTTCAGTTCTAACATCAAA+TGG + chr6_1:6320473-6320492 Msa0871440:intron 30.0%
! AGAAATTTTATGTGACAGCT+TGG + chr6_1:6320655-6320674 Msa0871440:intron 30.0%
!! ATTTGATTTTCCACCATTCA+TGG + chr6_1:6320705-6320724 Msa0871440:CDS 30.0%
ATGACTTCACTAGTAAAAAG+GGG - chr6_1:6320794-6320813 None:intergenic 30.0%
CATGACTTCACTAGTAAAAA+GGG - chr6_1:6320795-6320814 None:intergenic 30.0%
CAATATTTCAAAATGATCCC+TGG + chr6_1:6320878-6320897 Msa0871440:intron 30.0%
ATGACATAAGTTTGTGATGT+CGG - chr6_1:6320993-6321012 None:intergenic 30.0%
!! GATGACAGTCATTTTCTTTT+TGG + chr6_1:6321380-6321399 Msa0871440:intron 30.0%
AGTATAAAAACATGACAGTG+AGG - chr6_1:6321478-6321497 None:intergenic 30.0%
! TGTAATTTTCAGAGCACATT+TGG + chr6_1:6321675-6321694 Msa0871440:CDS 30.0%
! GTAATTTTCAGAGCACATTT+GGG + chr6_1:6321676-6321695 Msa0871440:CDS 30.0%
! GACTAATTGTACTAACTTGT+AGG - chr6_1:6321759-6321778 None:intergenic 30.0%
ACAAGTTAGTACAATTAGTC+AGG + chr6_1:6321759-6321778 Msa0871440:CDS 30.0%
ATCGAAATTCACTTAACAAG+TGG - chr6_1:6322040-6322059 None:intergenic 30.0%
TGACTGAATACACTAAGTTT+AGG - chr6_1:6322102-6322121 None:intergenic 30.0%
GTATTCTACGATTCATGATA+AGG + chr6_1:6322277-6322296 Msa0871440:intron 30.0%
TTCATGATAAGGTTCGATTA+TGG + chr6_1:6322288-6322307 Msa0871440:intron 30.0%
AAAACTCCAGTTTGCATAAA+CGG - chr6_1:6322418-6322437 None:intergenic 30.0%
ATGACCTTGATAAAATCAAG+TGG - chr6_1:6322510-6322529 None:intergenic 30.0%
!!! GGATCTTGTTTTTGAACAAA+GGG + chr6_1:6322560-6322579 Msa0871440:intron 30.0%
AACTTAACATCTGAACTTGT+TGG + chr6_1:6322783-6322802 Msa0871440:intron 30.0%
!! AAGGAAGAAAGATTTTGGAA+AGG + chr6_1:6322852-6322871 Msa0871440:CDS 30.0%
TTATACAGAGCTTAATCAGA+TGG + chr6_1:6322963-6322982 Msa0871440:CDS 30.0%
TACTACCAAAGAGTGAATAA+TGG + chr6_1:6323115-6323134 Msa0871440:intron 30.0%
TGGTGTGATGAGTATATATA+GGG + chr6_1:6323297-6323316 Msa0871440:intron 30.0%
! ACCGACATTTTAGATTTTGA+AGG + chr6_1:6323331-6323350 Msa0871440:intron 30.0%
! GCCTTCAAAATCTAAAATGT+CGG - chr6_1:6323335-6323354 None:intergenic 30.0%
AAAGTAGAGTTCAATAGACA+TGG + chr6_1:6323600-6323619 Msa0871440:intron 30.0%
ATTGTTAGGAGTTAAGAGTT+TGG - chr6_1:6323822-6323841 None:intergenic 30.0%
GTTCATTATAGTTGTAGCAT+TGG - chr6_1:6323875-6323894 None:intergenic 30.0%
! CAATGAATCTTTGTGCATTT+TGG - chr6_1:6323982-6324001 None:intergenic 30.0%
TTGTTGAGTAGTATCATGTT+GGG - chr6_1:6324037-6324056 None:intergenic 30.0%
TTTGTTGAGTAGTATCATGT+TGG - chr6_1:6324038-6324057 None:intergenic 30.0%
AAGGGACGTAACATTAAAAT+TGG - chr6_1:6324070-6324089 None:intergenic 30.0%
!! AATTTTAATGTTACGTCCCT+TGG + chr6_1:6324069-6324088 Msa0871440:intron 30.0%
AGACCAATAGTCCAATAAAA+TGG + chr6_1:6324132-6324151 Msa0871440:intron 30.0%
! GTTCCATTTTATTGGACTAT+TGG - chr6_1:6324138-6324157 None:intergenic 30.0%
!!! TGTCATTTTTGTTGTATGCA+CGG + chr6_1:6324194-6324213 Msa0871440:intron 30.0%
ATCAACTTGACAATAAGTTG+TGG - chr6_1:6324232-6324251 None:intergenic 30.0%
!! ACAACTTATTGTCAAGTTGA+TGG + chr6_1:6324231-6324250 Msa0871440:intron 30.0%
! CATACTTTGAACCATTTTGT+TGG + chr6_1:6324269-6324288 Msa0871440:intron 30.0%
ATATGCATAACCCAACAAAA+TGG - chr6_1:6324283-6324302 None:intergenic 30.0%
AGATTGTGATGAGAAGATTA+AGG + chr6_1:6324535-6324554 Msa0871440:intron 30.0%
!! CAAATCTTTGATGTTTCTAG+GGG - chr6_1:6324666-6324685 None:intergenic 30.0%
! GCAAATCTTTGATGTTTCTA+GGG - chr6_1:6324667-6324686 None:intergenic 30.0%
AGCAAATCTTTGATGTTTCT+AGG - chr6_1:6324668-6324687 None:intergenic 30.0%
!! ACATCAAAGATTTGCTATGT+TGG + chr6_1:6324672-6324691 Msa0871440:intron 30.0%
ATGAGTGCTTATATACTATG+TGG + chr6_1:6324725-6324744 Msa0871440:intron 30.0%
TGAGTGCTTATATACTATGT+GGG + chr6_1:6324726-6324745 Msa0871440:intron 30.0%
ATATACTATGTGGGATTTCT+AGG + chr6_1:6324735-6324754 Msa0871440:intron 30.0%
TCATAAATCATCCTTGTGTT+TGG - chr6_1:6324931-6324950 None:intergenic 30.0%
TTGGCACACATATTAAGAAA+GGG - chr6_1:6325307-6325326 None:intergenic 30.0%
TTTGGCACACATATTAAGAA+AGG - chr6_1:6325308-6325327 None:intergenic 30.0%
GACGATTAATCCCATATTTA+TGG - chr6_1:6325588-6325607 None:intergenic 30.0%
AGATAATATAAGGACGAAGA+AGG - chr6_1:6326197-6326216 None:intergenic 30.0%
! ATGATTGATGATTGATCCAA+TGG + chr6_1:6326412-6326431 Msa0871440:intron 30.0%
! AAACTTTCCACTGCTTATTT+TGG - chr6_1:6326520-6326539 None:intergenic 30.0%
! AGATCTAGAGATTTAAAGCA+TGG + chr6_1:6327107-6327126 Msa0871440:intron 30.0%
! GATCTAGAGATTTAAAGCAT+GGG + chr6_1:6327108-6327127 Msa0871440:intron 30.0%
GATGGGACACTAAATTTATA+TGG - chr6_1:6327298-6327317 None:intergenic 30.0%
! GTTTAAAATTCACATGGGAT+GGG - chr6_1:6327315-6327334 None:intergenic 30.0%
! TTTTCAACGCAATCTTTGAT+TGG - chr6_1:6327337-6327356 None:intergenic 30.0%
GTCATAAGTTGCATTGTTTA+AGG + chr6_1:6327590-6327609 Msa0871440:intron 30.0%
! GGAAGATTTTATGTACTTGA+AGG - chr6_1:6327761-6327780 None:intergenic 30.0%
! TTTTGTCTTGACTCTTAAAG+TGG - chr6_1:6327818-6327837 None:intergenic 30.0%
AGACAAAAATACAAAAGCAG+TGG + chr6_1:6327830-6327849 Msa0871440:intron 30.0%
AAATACAAAAGCAGTGGAAA+AGG + chr6_1:6327836-6327855 Msa0871440:intron 30.0%
TGGAACAAGAAATAAAACAG+AGG + chr6_1:6327938-6327957 Msa0871440:intron 30.0%
ACTTTGCAGCATTAAAATCT+TGG + chr6_1:6328022-6328041 Msa0871440:intron 30.0%
CTTTGCAGCATTAAAATCTT+GGG + chr6_1:6328023-6328042 Msa0871440:intron 30.0%
! AGCATTAAAATCTTGGGTTT+TGG + chr6_1:6328029-6328048 Msa0871440:intron 30.0%
! GGTTACTTGAATTTCTTTTC+AGG + chr6_1:6328377-6328396 Msa0871440:intron 30.0%
ATGTGTTAGTGTCAAAAAGT+CGG - chr6_1:6328665-6328684 None:intergenic 30.0%
!!! TGAAGTTTTTGGGATTTATG+TGG + chr6_1:6328904-6328923 Msa0871440:CDS 30.0%
! TAGCAATATAAAGCATTTCG+AGG - chr6_1:6329132-6329151 None:intergenic 30.0%
AAATTTCACAACCACAATTG+CGG - chr6_1:6329155-6329174 None:intergenic 30.0%
!!! GATTTTGATTTTGAAGTGTG+TGG + chr6_1:6329183-6329202 Msa0871440:intron 30.0%
!!! AGTTGTAGAAGGTTCTTTTT+TGG + chr6_1:6329238-6329257 Msa0871440:intron 30.0%
! TATATTTAGGTTCTTCGAGA+TGG + chr6_1:6329566-6329585 Msa0871440:intron 30.0%
! ATATTTAGGTTCTTCGAGAT+GGG + chr6_1:6329567-6329586 Msa0871440:intron 30.0%
TTAACACTAATTATATCGCC+TGG - chr6_1:6329626-6329645 None:intergenic 30.0%
!! TTTGAAACTAAGCGTGTTTT+TGG + chr6_1:6330007-6330026 Msa0871440:intron 30.0%
AAAAGTTCCCAATTGAAGTT+AGG - chr6_1:6330132-6330151 None:intergenic 30.0%
TTGTATATGTTCAATTGCTG+TGG + chr6_1:6330150-6330169 Msa0871440:CDS 30.0%
TGTATATGTTCAATTGCTGT+GGG + chr6_1:6330151-6330170 Msa0871440:CDS 30.0%
!!! GATATTTTCGGTGTTGAATT+GGG - chr6_1:6330204-6330223 None:intergenic 30.0%
!! ATGCTTTTTGTGATTATTGC+AGG + chr6_1:6330532-6330551 Msa0871440:intron 30.0%
!! TGCTTTTTGTGATTATTGCA+GGG + chr6_1:6330533-6330552 Msa0871440:intron 30.0%
TGTTGACAAGAATCTTATTG+AGG + chr6_1:6330652-6330671 Msa0871440:CDS 30.0%
CTATAGATGCTGCTATTATA+GGG + chr6_1:6330839-6330858 Msa0871440:CDS 30.0%
!! GCAAGTTTTATGTGATGATT+TGG - chr6_1:6330912-6330931 None:intergenic 30.0%
ACACCTTAAATATGAAGTGT+CGG - chr6_1:6331070-6331089 None:intergenic 30.0%
CTTGTATTTGTCCGAAAATT+AGG + chr6_1:6331339-6331358 Msa0871440:intron 30.0%
ATATGAAACATATACCTGGT+AGG - chr6_1:6319381-6319400 None:intergenic 30.0%
! TGAGCAAATTCAAGTTACAT+TGG + chr6_1:6319421-6319440 Msa0871440:intron 30.0%
! ATAAGTAGGGCATTAAATCT+TGG + chr6_1:6319586-6319605 Msa0871440:five_prime_UTR 30.0%
TTAATATGTTTCGCACTACT+CGG + chr6_1:6319709-6319728 Msa0871440:intron 30.0%
GATTTGATTGAAAAAGCTGA+TGG + chr6_1:6319900-6319919 Msa0871440:five_prime_UTR 30.0%
TATTATACCAGGAAAAACAC+CGG - chr6_1:6319931-6319950 None:intergenic 30.0%
TCCACACATCAATATAATAG+CGG + chr6_1:6319981-6320000 Msa0871440:intron 30.0%
AAGTACACTTTACGTTTACA+AGG + chr6_1:6320102-6320121 Msa0871440:intron 30.0%
CTGTGTAATTCTTCATTCTT+TGG - chr6_1:6320445-6320464 None:intergenic 30.0%
TTGATGTTAGAACTGAAAGT+AGG - chr6_1:6320472-6320491 None:intergenic 30.0%
! CTTTCAGTTCTAACATCAAA+TGG + chr6_1:6320473-6320492 Msa0871440:intron 30.0%
! AGAAATTTTATGTGACAGCT+TGG + chr6_1:6320655-6320674 Msa0871440:intron 30.0%
!! ATTTGATTTTCCACCATTCA+TGG + chr6_1:6320705-6320724 Msa0871440:CDS 30.0%
ATGACTTCACTAGTAAAAAG+GGG - chr6_1:6320794-6320813 None:intergenic 30.0%
CATGACTTCACTAGTAAAAA+GGG - chr6_1:6320795-6320814 None:intergenic 30.0%
ATGACATAAGTTTGTGATGT+CGG - chr6_1:6320993-6321012 None:intergenic 30.0%
! AATTATTCTTGGTGGCTATT+TGG + chr6_1:6333639-6333658 Msa0871440:CDS 30.0%
!! TGATGACAGTCATTTTCTTT+TGG + chr6_1:6321379-6321398 Msa0871440:intron 30.0%
!! GATGACAGTCATTTTCTTTT+GGG + chr6_1:6321380-6321399 Msa0871440:intron 30.0%
AGTATAAAAACATGACAGTG+AGG - chr6_1:6321478-6321497 None:intergenic 30.0%
! TGTAATTTTCAGAGCACATT+TGG + chr6_1:6321675-6321694 Msa0871440:CDS 30.0%
! GTAATTTTCAGAGCACATTT+GGG + chr6_1:6321676-6321695 Msa0871440:CDS 30.0%
! TAATTTTCAGAGCACATTTG+GGG + chr6_1:6321677-6321696 Msa0871440:CDS 30.0%
! GACTAATTGTACTAACTTGT+AGG - chr6_1:6321759-6321778 None:intergenic 30.0%
ACAAGTTAGTACAATTAGTC+AGG + chr6_1:6321759-6321778 Msa0871440:CDS 30.0%
TCGAAATTCAACTTAACAAG+TGG - chr6_1:6334328-6334347 None:intergenic 30.0%
TGACTGAATACACTAAGTTT+AGG - chr6_1:6322102-6322121 None:intergenic 30.0%
GTATTCTACGATTCATGATA+AGG + chr6_1:6322277-6322296 Msa0871440:intron 30.0%
TTCATGATAAGGTTCGATTA+TGG + chr6_1:6322288-6322307 Msa0871440:intron 30.0%
AAAACTCCAGTTTGCATAAA+CGG - chr6_1:6322418-6322437 None:intergenic 30.0%
ATGACCTTGATAAAATCAAG+TGG - chr6_1:6322510-6322529 None:intergenic 30.0%
!!! GGATCTTGTTTTTGAACAAA+GGG + chr6_1:6322560-6322579 Msa0871440:intron 30.0%
AACTTAACATCTGAACTTGT+TGG + chr6_1:6322783-6322802 Msa0871440:intron 30.0%
!! AAGGAAGAAAGATTTTGGAA+AGG + chr6_1:6322852-6322871 Msa0871440:CDS 30.0%
TTATACAGAGCTTAATCAGA+TGG + chr6_1:6322963-6322982 Msa0871440:CDS 30.0%
TACTACCAAAGAGTGAATAA+TGG + chr6_1:6323115-6323134 Msa0871440:intron 30.0%
GAGCATATGAAACATATACC+TGG - chr6_1:6319385-6319404 None:intergenic 35.0%
TTGTGTCCTTTGCATGTTAT+TGG + chr6_1:6319634-6319653 Msa0871440:intron 35.0%
TGTGTCCTTTGCATGTTATT+GGG + chr6_1:6319635-6319654 Msa0871440:intron 35.0%
GCGCTTATAGAATAAGCATT+TGG + chr6_1:6319684-6319703 Msa0871440:intron 35.0%
CTATCAATAGCGAAAGAAAC+AGG + chr6_1:6319786-6319805 Msa0871440:five_prime_UTR 35.0%
!! TACCCTTCATCAGCTTTATT+AGG + chr6_1:6319837-6319856 Msa0871440:five_prime_UTR 35.0%
TCAAATCATCAACTGGTAAG+AGG - chr6_1:6319887-6319906 None:intergenic 35.0%
AACTCATCATGTCAAACAAG+CGG - chr6_1:6320194-6320213 None:intergenic 35.0%
ACGATCTCATATTTGTGTTC+TGG - chr6_1:6320225-6320244 None:intergenic 35.0%
ATATCTGCTTTCTTAAGAGC+AGG - chr6_1:6320308-6320327 None:intergenic 35.0%
GCTCTTAAGAAAGCAGATAT+TGG + chr6_1:6320308-6320327 Msa0871440:CDS 35.0%
! TGGTTCTGTTAGAACAATGT+CGG - chr6_1:6320375-6320394 None:intergenic 35.0%
ATAATCAGTACCATGAATGG+TGG - chr6_1:6320718-6320737 None:intergenic 35.0%
GCAATAATCAGTACCATGAA+TGG - chr6_1:6320721-6320740 None:intergenic 35.0%
CCATGACTTCACTAGTAAAA+AGG - chr6_1:6320796-6320815 None:intergenic 35.0%
! CCTTTTTACTAGTGAAGTCA+TGG + chr6_1:6320793-6320812 Msa0871440:intron 35.0%
ATGGCTGTATATATCGTAGT+TGG + chr6_1:6320812-6320831 Msa0871440:intron 35.0%
TAGTTGGTCCTTGAAATTGT+AGG + chr6_1:6320828-6320847 Msa0871440:intron 35.0%
!! ATATTGATAATGCGAGGACT+AGG - chr6_1:6320864-6320883 None:intergenic 35.0%
GTAAAGTTTGTCTCTCAATC+TGG + chr6_1:6320915-6320934 Msa0871440:intron 35.0%
ACTCGAAGTCATGGATATTT+AGG + chr6_1:6321152-6321171 Msa0871440:intron 35.0%
TTCACCACTGGAATTATTCT+TGG + chr6_1:6321342-6321361 Msa0871440:CDS 35.0%
AACTTGTAGGTATATTGCTG+AGG - chr6_1:6321746-6321765 None:intergenic 35.0%
TGACCGCGTTACAAATATAA+GGG - chr6_1:6321785-6321804 None:intergenic 35.0%
TTATATTTGTAACGCGGTCA+CGG + chr6_1:6321785-6321804 Msa0871440:CDS 35.0%
!!! GGGATCTTGTTTTTGAACAA+AGG + chr6_1:6322559-6322578 Msa0871440:intron 35.0%
!! TAACATCTGAACTTGTTGGT+TGG + chr6_1:6322787-6322806 Msa0871440:intron 35.0%
TGAAGAAGCTAAAAAACGAG+CGG + chr6_1:6322987-6323006 Msa0871440:CDS 35.0%
AGAAGCCATTATTCACTCTT+TGG - chr6_1:6323123-6323142 None:intergenic 35.0%
! TTCTAACAACTGACTCAACA+TGG - chr6_1:6323206-6323225 None:intergenic 35.0%
TGAGTCAGTTGTTAGAATGA+AGG + chr6_1:6323209-6323228 Msa0871440:CDS 35.0%
GAGTCAGTTGTTAGAATGAA+GGG + chr6_1:6323210-6323229 Msa0871440:CDS 35.0%
GTGGTGTGATGAGTATATAT+AGG + chr6_1:6323296-6323315 Msa0871440:intron 35.0%
GAACAAGCATATAGATTGCA+AGG - chr6_1:6323476-6323495 None:intergenic 35.0%
! ATGCTTGTTCCTTGCAATTT+TGG + chr6_1:6323486-6323505 Msa0871440:intron 35.0%
TGCAAGAGTTGTTGTAGTAA+AGG - chr6_1:6323905-6323924 None:intergenic 35.0%
!! CAAAGATTTGCTATGTTGGA+AGG + chr6_1:6324676-6324695 Msa0871440:intron 35.0%
! ACTCATAGTCTTTTTCTCAC+AGG - chr6_1:6324711-6324730 None:intergenic 35.0%
!! GAAGGTTCATTTTTAGACTC+TGG + chr6_1:6324757-6324776 Msa0871440:intron 35.0%
TAACTTTGGATTCTCTTGCT+AGG + chr6_1:6324825-6324844 Msa0871440:intron 35.0%
AAATCATCCTTGTGTTTGGA+AGG - chr6_1:6324927-6324946 None:intergenic 35.0%
!! AAGCGACACTCATTTTGAAA+CGG - chr6_1:6325098-6325117 None:intergenic 35.0%
AAAGTTTGAGAGGGTAAAGT+TGG - chr6_1:6325190-6325209 None:intergenic 35.0%
TGTGAGAGAAAAGTTTGAGA+GGG - chr6_1:6325199-6325218 None:intergenic 35.0%
! CCACATGTGTTTTGCTTAAA+AGG - chr6_1:6325482-6325501 None:intergenic 35.0%
! CCTTTTAAGCAAAACACATG+TGG + chr6_1:6325479-6325498 Msa0871440:intron 35.0%
! CAAAACACATGTGGTTTTTG+AGG + chr6_1:6325488-6325507 Msa0871440:intron 35.0%
AGGTGGTGAATATTTGAATG+TGG + chr6_1:6325508-6325527 Msa0871440:intron 35.0%
ATAGTCAAGTTTCCACTTTG+TGG + chr6_1:6325702-6325721 Msa0871440:intron 35.0%
ACACGTTATCACAAAATGAC+TGG + chr6_1:6325819-6325838 Msa0871440:intron 35.0%
!!! GATTTTTTTGGCATGTAGTG+AGG + chr6_1:6325867-6325886 Msa0871440:intron 35.0%
! AACCAATCTTTGAGTCTTGT+AGG + chr6_1:6325980-6325999 Msa0871440:intron 35.0%
ATCCTACAAGACTCAAAGAT+TGG - chr6_1:6325985-6326004 None:intergenic 35.0%
TTGTGTCATCTCAATGTTCT+TGG + chr6_1:6326098-6326117 Msa0871440:intron 35.0%
TACGAAACTTGTAGAGCTAA+AGG + chr6_1:6326339-6326358 Msa0871440:intron 35.0%
GTGTGTGATAATATGACCAT+TGG - chr6_1:6326431-6326450 None:intergenic 35.0%
TGTATCACCAAAATAAGCAG+TGG + chr6_1:6326510-6326529 Msa0871440:intron 35.0%
!! GAGATGGTGGATATTTCAAA+GGG - chr6_1:6326558-6326577 None:intergenic 35.0%
!! AGAGATGGTGGATATTTCAA+AGG - chr6_1:6326559-6326578 None:intergenic 35.0%
AAAGAGATGGAAGATAGAGA+TGG - chr6_1:6326574-6326593 None:intergenic 35.0%
TCTCTATCTTCCATCTCTTT+AGG + chr6_1:6326574-6326593 Msa0871440:intron 35.0%
TATAGCAGTACCTAAAGAGA+TGG - chr6_1:6326587-6326606 None:intergenic 35.0%
! CAGCTCTATAATGCTTTGAA+AGG + chr6_1:6326612-6326631 Msa0871440:intron 35.0%
ACCTTTATATAGTGCCCTTA+GGG - chr6_1:6326872-6326891 None:intergenic 35.0%
!! TTAGTTTGTAGGCGAGTTAA+AGG + chr6_1:6326957-6326976 Msa0871440:intron 35.0%
TTATATGGGACCACATGATT+TGG - chr6_1:6327283-6327302 None:intergenic 35.0%
! GGTTTAAAATTCACATGGGA+TGG - chr6_1:6327316-6327335 None:intergenic 35.0%
TAGTGCTTAAACAATGCCTT+AGG + chr6_1:6327670-6327689 Msa0871440:intron 35.0%
AGTGCTTAAACAATGCCTTA+GGG + chr6_1:6327671-6327690 Msa0871440:intron 35.0%
ACAACATGGTAAGCATTTCT+AGG - chr6_1:6327782-6327801 None:intergenic 35.0%
!!! ATCTTGGGTTTTGGCTATTA+TGG + chr6_1:6328038-6328057 Msa0871440:intron 35.0%
! TTTGACAGAAGCTGTTGATT+TGG + chr6_1:6328090-6328109 Msa0871440:intron 35.0%
! GTTTGAAACACTTCCTCAAT+TGG - chr6_1:6328411-6328430 None:intergenic 35.0%
!! AGGAAGTGTTTCAAACTTTG+AGG + chr6_1:6328415-6328434 Msa0871440:CDS 35.0%
!! ACTTTGAGGTGTGATTCAAA+TGG + chr6_1:6328429-6328448 Msa0871440:CDS 35.0%
! CTTCATATTGAAAGTGTGTC+TGG + chr6_1:6328636-6328655 Msa0871440:intron 35.0%
ACACATGCGATTACATTCAA+CGG + chr6_1:6328679-6328698 Msa0871440:intron 35.0%
CTAAACATTGACACAACTAC+CGG - chr6_1:6328777-6328796 None:intergenic 35.0%
!!! ATGGTTTTAAATTGCGGTTG+TGG + chr6_1:6329046-6329065 Msa0871440:intron 35.0%
CTTTACATTGCAGTGAAATG+CGG + chr6_1:6329077-6329096 Msa0871440:intron 35.0%
TTATATTGCTACCGCAATTG+TGG + chr6_1:6329141-6329160 Msa0871440:intron 35.0%
! TTTAGAATAAACCACCCGAT+TGG + chr6_1:6329302-6329321 Msa0871440:intron 35.0%
TTCCACAATAAGTTTCATCG+AGG + chr6_1:6329363-6329382 Msa0871440:intron 35.0%
TTCCTCGATGAAACTTATTG+TGG - chr6_1:6329368-6329387 None:intergenic 35.0%
!! GAGATTAACACCTTAGCTTT+TGG - chr6_1:6329436-6329455 None:intergenic 35.0%
! TTACTTTGGGTTCCTTAAAC+AGG + chr6_1:6330105-6330124 Msa0871440:intron 35.0%
TTGAAGTTAGGACCTGTTTA+AGG - chr6_1:6330120-6330139 None:intergenic 35.0%
AAACAGGTCCTAACTTCAAT+TGG + chr6_1:6330121-6330140 Msa0871440:intron 35.0%
AACAGGTCCTAACTTCAATT+GGG + chr6_1:6330122-6330141 Msa0871440:intron 35.0%
!!! CGATATTTTCGGTGTTGAAT+TGG - chr6_1:6330205-6330224 None:intergenic 35.0%
ACAAGTAGATTATCAATCCC+TGG - chr6_1:6330229-6330248 None:intergenic 35.0%
AATCTACTTGTGCTTCTCAT+TGG + chr6_1:6330238-6330257 Msa0871440:CDS 35.0%
ATTGTAACTGACAGAACTGT+AGG - chr6_1:6330283-6330302 None:intergenic 35.0%
TACAGTTCTGTCAGTTACAA+TGG + chr6_1:6330282-6330301 Msa0871440:CDS 35.0%
AATGACAGCAATAGAAGAGA+TGG + chr6_1:6330571-6330590 Msa0871440:intron 35.0%
! AGTAAGTTTTTGTAATGCGG+TGG + chr6_1:6330683-6330702 Msa0871440:intron 35.0%
GCTATAGATGCTGCTATTAT+AGG + chr6_1:6330838-6330857 Msa0871440:CDS 35.0%
CAACAAACCAAATGAGGAAA+GGG - chr6_1:6331037-6331056 None:intergenic 35.0%
ACAACAAACCAAATGAGGAA+AGG - chr6_1:6331038-6331057 None:intergenic 35.0%
GCTTTACAACAAACCAAATG+AGG - chr6_1:6331043-6331062 None:intergenic 35.0%
ATTTGTCCGAAAATTAGGCA+AGG + chr6_1:6331344-6331363 Msa0871440:intron 35.0%
TTTGTCCGAAAATTAGGCAA+GGG + chr6_1:6331345-6331364 Msa0871440:intron 35.0%
GAATCACTTTCATTGTCAAG+TGG - chr6_1:6331529-6331548 None:intergenic 35.0%
GAGCATATGAAACATATACC+TGG - chr6_1:6319385-6319404 None:intergenic 35.0%
TTGTGTCCTTTGCATGTTAT+TGG + chr6_1:6319634-6319653 Msa0871440:intron 35.0%
TGTGTCCTTTGCATGTTATT+GGG + chr6_1:6319635-6319654 Msa0871440:intron 35.0%
GCGCTTATAGAATAAGCATT+TGG + chr6_1:6319684-6319703 Msa0871440:intron 35.0%
CTATCAATAGCGAAAGAAAC+AGG + chr6_1:6319786-6319805 Msa0871440:five_prime_UTR 35.0%
!! TACCCTTCATCAGCTTTATT+AGG + chr6_1:6319837-6319856 Msa0871440:five_prime_UTR 35.0%
TCAAATCATCAACTGGTAAG+AGG - chr6_1:6319887-6319906 None:intergenic 35.0%
AACTCATCATGTCAAACAAG+CGG - chr6_1:6320194-6320213 None:intergenic 35.0%
ACGATCTCATATTTGTGTTC+TGG - chr6_1:6320225-6320244 None:intergenic 35.0%
AAACACATATGTGGAATGAC+CGG + chr6_1:6320264-6320283 Msa0871440:exon 35.0%
ATATCTGCTTTCTTAAGAGC+AGG - chr6_1:6320308-6320327 None:intergenic 35.0%
GCTCTTAAGAAAGCAGATAT+TGG + chr6_1:6320308-6320327 Msa0871440:CDS 35.0%
! TGGTTCTGTTAGAACAATGT+CGG - chr6_1:6320375-6320394 None:intergenic 35.0%
ATAATCAGTACCATGAATGG+TGG - chr6_1:6320718-6320737 None:intergenic 35.0%
GCAATAATCAGTACCATGAA+TGG - chr6_1:6320721-6320740 None:intergenic 35.0%
CCATGACTTCACTAGTAAAA+AGG - chr6_1:6320796-6320815 None:intergenic 35.0%
! CCTTTTTACTAGTGAAGTCA+TGG + chr6_1:6320793-6320812 Msa0871440:intron 35.0%
ATGGCTGTATATATCGTAGT+TGG + chr6_1:6320812-6320831 Msa0871440:intron 35.0%
TAGTTGGTCCTTGAAATTGT+AGG + chr6_1:6320828-6320847 Msa0871440:intron 35.0%
GTAAAGTTTGTCTCTCAATC+TGG + chr6_1:6320915-6320934 Msa0871440:intron 35.0%
ACTCGAAGTCATGGATATTT+AGG + chr6_1:6321152-6321171 Msa0871440:intron 35.0%
TTCACCACTGGAATTATTCT+TGG + chr6_1:6321342-6321361 Msa0871440:CDS 35.0%
AAGTCTTCAGAAAGAGGATA+GGG + chr6_1:6333989-6334008 Msa0871440:CDS 35.0%
AACTTGTAGGTATATTGCTG+AGG - chr6_1:6321746-6321765 None:intergenic 35.0%
TGACCGCGTTACAAATATAA+GGG - chr6_1:6321785-6321804 None:intergenic 35.0%
TTATATTTGTAACGCGGTCA+CGG + chr6_1:6321785-6321804 Msa0871440:CDS 35.0%
!!! GGGATCTTGTTTTTGAACAA+AGG + chr6_1:6322559-6322578 Msa0871440:intron 35.0%
!! TAACATCTGAACTTGTTGGT+TGG + chr6_1:6322787-6322806 Msa0871440:intron 35.0%
TGAAGAAGCTAAAAAACGAG+CGG + chr6_1:6322987-6323006 Msa0871440:CDS 35.0%
AGAAGCCATTATTCACTCTT+TGG - chr6_1:6323123-6323142 None:intergenic 35.0%
! TTCTAACAACTGACTCAACA+TGG - chr6_1:6323206-6323225 None:intergenic 35.0%
TGAGTCAGTTGTTAGAATGA+AGG + chr6_1:6323209-6323228 Msa0871440:CDS 35.0%
GAGTCAGTTGTTAGAATGAA+GGG + chr6_1:6323210-6323229 Msa0871440:CDS 35.0%
TCAGGAACTTCCTGAGAAAT+AGG - chr6_1:6319478-6319497 None:intergenic 40.0%
ATTTCTCAGGAAGTTCCTGA+TGG + chr6_1:6319478-6319497 Msa0871440:intron 40.0%
TGGCTTTCTTTCTTTCCATC+AGG - chr6_1:6319496-6319515 None:intergenic 40.0%
GATGGAAAGAAAGAAAGCCA+AGG + chr6_1:6319496-6319515 Msa0871440:five_prime_UTR 40.0%
ATAGTGCAGAGACGATAAGT+AGG + chr6_1:6319572-6319591 Msa0871440:five_prime_UTR 40.0%
TAGTGCAGAGACGATAAGTA+GGG + chr6_1:6319573-6319592 Msa0871440:five_prime_UTR 40.0%
ACATGCCCAATAACATGCAA+AGG - chr6_1:6319643-6319662 None:intergenic 40.0%
TGCATGTTATTGGGCATGTT+TGG + chr6_1:6319644-6319663 Msa0871440:intron 40.0%
TGTTAGTTCCCATTCCTAGA+CGG - chr6_1:6319815-6319834 None:intergenic 40.0%
GGCCTAATAAAGCTGATGAA+GGG - chr6_1:6319842-6319861 None:intergenic 40.0%
TGGCCTAATAAAGCTGATGA+AGG - chr6_1:6319843-6319862 None:intergenic 40.0%
!! AGCTTTATTAGGCCAGAACA+AGG + chr6_1:6319848-6319867 Msa0871440:five_prime_UTR 40.0%
CAATTCCTTCATCCTTGTTC+TGG - chr6_1:6319863-6319882 None:intergenic 40.0%
CAGAACAAGGATGAAGGAAT+TGG + chr6_1:6319861-6319880 Msa0871440:five_prime_UTR 40.0%
!! GAAAAAGCTGATGGATTTGC+CGG + chr6_1:6319909-6319928 Msa0871440:five_prime_UTR 40.0%
GCCGCTATTATATTGATGTG+TGG - chr6_1:6319985-6320004 None:intergenic 40.0%
CAAGCTAGGAAACACATATG+TGG + chr6_1:6320255-6320274 Msa0871440:exon 40.0%
GAGCATCATTAACACCATCA+CGG - chr6_1:6320286-6320305 None:intergenic 40.0%
GACATTGTTCTAACAGAACC+AGG + chr6_1:6320374-6320393 Msa0871440:CDS 40.0%
CTAATGATAACACTGAGACC+TGG - chr6_1:6320395-6320414 None:intergenic 40.0%
!! TCTTTGGAATATTGCTCGAC+TGG - chr6_1:6320429-6320448 None:intergenic 40.0%
ACAGCTTGGTTTCATGTTAC+TGG + chr6_1:6320669-6320688 Msa0871440:intron 40.0%
TCATGTTACTGGCACTCATA+TGG + chr6_1:6320680-6320699 Msa0871440:CDS 40.0%
GATACGGTCCTACAATTTCA+AGG - chr6_1:6320839-6320858 None:intergenic 40.0%
TGGGAATTTACTCGAAGTCA+TGG + chr6_1:6321143-6321162 Msa0871440:intron 40.0%
ACCACTGGAATTATTCTTGG+TGG + chr6_1:6321345-6321364 Msa0871440:CDS 40.0%
ACCACCAAGAATAATTCCAG+TGG - chr6_1:6321349-6321368 None:intergenic 40.0%
TCAAGTCTTCAGAAGAGGAT+AGG + chr6_1:6321701-6321720 Msa0871440:CDS 40.0%
CAAGTCTTCAGAAGAGGATA+GGG + chr6_1:6321702-6321721 Msa0871440:CDS 40.0%
AGGCCCTTATATTTGTAACG+CGG + chr6_1:6321779-6321798 Msa0871440:CDS 40.0%
GTGACCGCGTTACAAATATA+AGG - chr6_1:6321786-6321805 None:intergenic 40.0%
! AGCTTTTGTCATTGCTCAAC+TGG + chr6_1:6321849-6321868 Msa0871440:CDS 40.0%
TCGCAAGATACCGATAAACA+TGG - chr6_1:6321929-6321948 None:intergenic 40.0%
! TGATTGCCGTTTATGCAAAC+TGG + chr6_1:6322409-6322428 Msa0871440:intron 40.0%
! TGGAGTTTTGCTGCAATTGA+AGG + chr6_1:6322429-6322448 Msa0871440:intron 40.0%
! GGAGTTTTGCTGCAATTGAA+GGG + chr6_1:6322430-6322449 Msa0871440:intron 40.0%
TTTGCTGCAATTGAAGGGAT+TGG + chr6_1:6322435-6322454 Msa0871440:intron 40.0%
TGCAATTGAAGGGATTGGAT+GGG + chr6_1:6322440-6322459 Msa0871440:intron 40.0%
TTCGATATGTATTGAGTGGC+CGG + chr6_1:6322532-6322551 Msa0871440:intron 40.0%
!! CAGTAAGGGCTTGTTGAATT+AGG + chr6_1:6322612-6322631 Msa0871440:intron 40.0%
AGGAAGAACGCGAACTTAAA+TGG + chr6_1:6322872-6322891 Msa0871440:CDS 40.0%
GGAAGAACGCGAACTTAAAT+GGG + chr6_1:6322873-6322892 Msa0871440:CDS 40.0%
AAAAACGAGCGGAAATTGCA+AGG + chr6_1:6322998-6323017 Msa0871440:CDS 40.0%
TATCCCTATGCTTCTGTTAG+TGG + chr6_1:6323277-6323296 Msa0871440:intron 40.0%
! ACACCACTAACAGAAGCATA+GGG - chr6_1:6323283-6323302 None:intergenic 40.0%
!! TTAGATTTTGAAGGCGTGTC+TGG + chr6_1:6323340-6323359 Msa0871440:intron 40.0%
GACACTACACGCAATAACTT+CGG + chr6_1:6323369-6323388 Msa0871440:intron 40.0%
CGTCTATGCTAATGCTTCAT+GGG + chr6_1:6323436-6323455 Msa0871440:intron 40.0%
! CTTGTTCCTTGCAATTTTGG+AGG + chr6_1:6323489-6323508 Msa0871440:intron 40.0%
CACAATCCTCCAAAATTGCA+AGG - chr6_1:6323498-6323517 None:intergenic 40.0%
TACGTCCCTTGGAAGAATAT+CGG + chr6_1:6324080-6324099 Msa0871440:intron 40.0%
! GGTGTTGAGTTGCTTAAATG+TGG + chr6_1:6324556-6324575 Msa0871440:intron 40.0%
! TGAACACGCATGTTACTTCT+TGG + chr6_1:6324596-6324615 Msa0871440:intron 40.0%
! ACTATGTGGGATTTCTAGGA+AGG + chr6_1:6324739-6324758 Msa0871440:intron 40.0%
TCTTCTTCCTTCCAAACACA+AGG + chr6_1:6324917-6324936 Msa0871440:intron 40.0%
TTAGTACTTCGCATATGCAG+AGG - chr6_1:6325050-6325069 None:intergenic 40.0%
!!! GACACTCATTTTGAAACGGA+GGG - chr6_1:6325094-6325113 None:intergenic 40.0%
GTGTGAGAGAAAAGTTTGAG+AGG - chr6_1:6325200-6325219 None:intergenic 40.0%
!! AACACATGTGGTTTTTGAGG+TGG + chr6_1:6325491-6325510 Msa0871440:intron 40.0%
TAAGAGTCACATCACTTGAG+AGG - chr6_1:6325666-6325685 None:intergenic 40.0%
TTTGTGGTCACTACCTTAGT+TGG + chr6_1:6325718-6325737 Msa0871440:intron 40.0%
GAGGCAGCAAAGAAAGTAAA+GGG - chr6_1:6326226-6326245 None:intergenic 40.0%
AGAGGCAGCAAAGAAAGTAA+AGG - chr6_1:6326227-6326246 None:intergenic 40.0%
GACCTTTATATAGTGCCCTT+AGG - chr6_1:6326873-6326892 None:intergenic 40.0%
!! ACCTTGCGTAGTTAGTTTGT+AGG + chr6_1:6326946-6326965 Msa0871440:intron 40.0%
TGTCTTGACTCTTAAAGTGG+CGG - chr6_1:6327815-6327834 None:intergenic 40.0%
TCTGTCAAAAACAGCATGCA+TGG - chr6_1:6328079-6328098 None:intergenic 40.0%
TCAGGAAAATGTGCCAATTG+AGG + chr6_1:6328395-6328414 Msa0871440:intron 40.0%
CTTTGGTCACAACAAACTTG+AGG + chr6_1:6328488-6328507 Msa0871440:CDS 40.0%
!! TGGCTTTATGTCTTCTGTTG+TGG + chr6_1:6328859-6328878 Msa0871440:intron 40.0%
TTATGTGGAATCCTCTCTCA+TGG + chr6_1:6328919-6328938 Msa0871440:CDS 40.0%
TATGTGGAATCCTCTCTCAT+GGG + chr6_1:6328920-6328939 Msa0871440:CDS 40.0%
AGCAATCATGGCTATTGCTT+TGG + chr6_1:6328956-6328975 Msa0871440:CDS 40.0%
AGTGTGTGGATGCACATTAT+AGG + chr6_1:6329197-6329216 Msa0871440:intron 40.0%
TTCATCGAGGAAAACAATGC+TGG + chr6_1:6329376-6329395 Msa0871440:intron 40.0%
TGATCCGTTGAAGATTGATC+AGG + chr6_1:6329688-6329707 Msa0871440:CDS 40.0%
TGCACCTGATCAATCTTCAA+CGG - chr6_1:6329695-6329714 None:intergenic 40.0%
!!! CTAAGATTCTGGTTTTCGGA+CGG + chr6_1:6329778-6329797 Msa0871440:intron 40.0%
CCTGAATAAACACTGTCACT+GGG - chr6_1:6329849-6329868 None:intergenic 40.0%
! GAAGCAGTTGTTATTGCAAC+CGG + chr6_1:6329894-6329913 Msa0871440:CDS 40.0%
AGTTCATACCTTCTTTGGCA+AGG + chr6_1:6329917-6329936 Msa0871440:CDS 40.0%
! AAAATGCCCGACTTGATTTG+TGG - chr6_1:6329961-6329980 None:intergenic 40.0%
AACACCGAAAATATCGTCCA+GGG + chr6_1:6330209-6330228 Msa0871440:CDS 40.0%
! CAATCCCTGGACGATATTTT+CGG - chr6_1:6330216-6330235 None:intergenic 40.0%
CTGTCAGTTACAATGGCAAT+CGG + chr6_1:6330289-6330308 Msa0871440:CDS 40.0%
TAAGTACTTGTGGGACTCTT+CGG - chr6_1:6330461-6330480 None:intergenic 40.0%
GTATTGTGCAGTGACAAAAC+TGG + chr6_1:6330605-6330624 Msa0871440:CDS 40.0%
TAGCAGCATCTATAGCATCT+TGG - chr6_1:6330834-6330853 None:intergenic 40.0%
AAACCAAATGAGGAAAGGGA+AGG - chr6_1:6331033-6331052 None:intergenic 40.0%
!! CCTTAAATATGAAGTGTCGG+TGG - chr6_1:6331067-6331086 None:intergenic 40.0%
CCACCGACACTTCATATTTA+AGG + chr6_1:6331064-6331083 Msa0871440:intron 40.0%
AAAATGCATCGTGTCAGCAA+AGG + chr6_1:6331448-6331467 Msa0871440:CDS 40.0%
GATAAGAAAGATACCTGCTC+CGG - chr6_1:6331478-6331497 None:intergenic 40.0%
TCAGGAACTTCCTGAGAAAT+AGG - chr6_1:6319478-6319497 None:intergenic 40.0%
ATTTCTCAGGAAGTTCCTGA+TGG + chr6_1:6319478-6319497 Msa0871440:intron 40.0%
TGGCTTTCTTTCTTTCCATC+AGG - chr6_1:6319496-6319515 None:intergenic 40.0%
GATGGAAAGAAAGAAAGCCA+AGG + chr6_1:6319496-6319515 Msa0871440:five_prime_UTR 40.0%
ATAGTGCAGAGACGATAAGT+AGG + chr6_1:6319572-6319591 Msa0871440:five_prime_UTR 40.0%
TAGTGCAGAGACGATAAGTA+GGG + chr6_1:6319573-6319592 Msa0871440:five_prime_UTR 40.0%
ACATGCCCAATAACATGCAA+AGG - chr6_1:6319643-6319662 None:intergenic 40.0%
TGCATGTTATTGGGCATGTT+TGG + chr6_1:6319644-6319663 Msa0871440:intron 40.0%
TGTTAGTTCCCATTCCTAGA+CGG - chr6_1:6319815-6319834 None:intergenic 40.0%
GGCCTAATAAAGCTGATGAA+GGG - chr6_1:6319842-6319861 None:intergenic 40.0%
TGGCCTAATAAAGCTGATGA+AGG - chr6_1:6319843-6319862 None:intergenic 40.0%
!! AGCTTTATTAGGCCAGAACA+AGG + chr6_1:6319848-6319867 Msa0871440:five_prime_UTR 40.0%
CAATTCCTTCATCCTTGTTC+TGG - chr6_1:6319863-6319882 None:intergenic 40.0%
CAGAACAAGGATGAAGGAAT+TGG + chr6_1:6319861-6319880 Msa0871440:five_prime_UTR 40.0%
!! GAAAAAGCTGATGGATTTGC+CGG + chr6_1:6319909-6319928 Msa0871440:five_prime_UTR 40.0%
GCCGCTATTATATTGATGTG+TGG - chr6_1:6319985-6320004 None:intergenic 40.0%
CAAGCTAGGAAACACATATG+TGG + chr6_1:6320255-6320274 Msa0871440:exon 40.0%
AGCATCATTAACACCATCAC+CGG - chr6_1:6320285-6320304 None:intergenic 40.0%
GACATTGTTCTAACAGAACC+AGG + chr6_1:6320374-6320393 Msa0871440:CDS 40.0%
CTAATGATAACACTGAGACC+TGG - chr6_1:6320395-6320414 None:intergenic 40.0%
!! TCTTTGGAATATTGCTCGAC+TGG - chr6_1:6320429-6320448 None:intergenic 40.0%
ACAGCTTGGTTTCATGTTAC+TGG + chr6_1:6320669-6320688 Msa0871440:intron 40.0%
TCATGTTACTGGCACTCATA+TGG + chr6_1:6320680-6320699 Msa0871440:CDS 40.0%
GATACGGTCCTACAATTTCA+AGG - chr6_1:6320839-6320858 None:intergenic 40.0%
!! ATGTGAGGACTAGGTTGATA+CGG - chr6_1:6333142-6333161 None:intergenic 40.0%
TGGGAATTTACTCGAAGTCA+TGG + chr6_1:6321143-6321162 Msa0871440:intron 40.0%
ACCACTGGAATTATTCTTGG+TGG + chr6_1:6321345-6321364 Msa0871440:CDS 40.0%
CAAGTCTTCAGAAAGAGGAT+AGG + chr6_1:6333988-6334007 Msa0871440:CDS 40.0%
AGGCCCTTATATTTGTAACG+CGG + chr6_1:6321779-6321798 Msa0871440:CDS 40.0%
GTGACCGCGTTACAAATATA+AGG - chr6_1:6321786-6321805 None:intergenic 40.0%
! AGCTTTTGTCATTGCTCAAC+TGG + chr6_1:6321849-6321868 Msa0871440:CDS 40.0%
TCGCAAGATACCGATAAACA+TGG - chr6_1:6321929-6321948 None:intergenic 40.0%
! TGATTGCCGTTTATGCAAAC+TGG + chr6_1:6322409-6322428 Msa0871440:intron 40.0%
! TGGAGTTTTGCTGCAATTGA+AGG + chr6_1:6322429-6322448 Msa0871440:intron 40.0%
! GGAGTTTTGCTGCAATTGAA+GGG + chr6_1:6322430-6322449 Msa0871440:intron 40.0%
TTTGCTGCAATTGAAGGGAT+TGG + chr6_1:6322435-6322454 Msa0871440:intron 40.0%
TGCAATTGAAGGGATTGGAT+GGG + chr6_1:6322440-6322459 Msa0871440:intron 40.0%
TTCGATATGTATTGAGTGGC+CGG + chr6_1:6322532-6322551 Msa0871440:intron 40.0%
!! CAGTAAGGGCTTGTTGAATT+AGG + chr6_1:6322612-6322631 Msa0871440:intron 40.0%
AGGAAGAACGCGAACTTAAA+TGG + chr6_1:6322872-6322891 Msa0871440:CDS 40.0%
GGAAGAACGCGAACTTAAAT+GGG + chr6_1:6322873-6322892 Msa0871440:CDS 40.0%
AAAAACGAGCGGAAATTGCA+AGG + chr6_1:6322998-6323017 Msa0871440:CDS 40.0%
TAGAGAGTTGCACACACTTA+AGG + chr6_1:6335474-6335493 Msa0871440:CDS 40.0%
AGAGAGTTGCACACACTTAA+GGG + chr6_1:6335475-6335494 Msa0871440:CDS 40.0%
AAGAAAGCCAAGGAAGACCT+TGG + chr6_1:6319506-6319525 Msa0871440:five_prime_UTR 45.0%
TAAACTGCCAAGGTCTTCCT+TGG - chr6_1:6319516-6319535 None:intergenic 45.0%
GGAAGACCTTGGCAGTTTAT+CGG + chr6_1:6319517-6319536 Msa0871440:five_prime_UTR 45.0%
GAAGACCTTGGCAGTTTATC+GGG + chr6_1:6319518-6319537 Msa0871440:five_prime_UTR 45.0%
TGTCTAGGTGGGTCGAATAA+AGG - chr6_1:6319550-6319569 None:intergenic 45.0%
CTGCACTATCATGTCTAGGT+GGG - chr6_1:6319561-6319580 None:intergenic 45.0%
TCTGCACTATCATGTCTAGG+TGG - chr6_1:6319562-6319581 None:intergenic 45.0%
GTCTCTGCACTATCATGTCT+AGG - chr6_1:6319565-6319584 None:intergenic 45.0%
TTAGGCCAGAACAAGGATGA+AGG + chr6_1:6319855-6319874 Msa0871440:five_prime_UTR 45.0%
TCGTGAAACGTTTGCAAGCT+AGG + chr6_1:6320241-6320260 Msa0871440:five_prime_UTR 45.0%
CATATGTGGAATGACCGTGA+TGG + chr6_1:6320269-6320288 Msa0871440:exon 45.0%
!! ATGCGAGGACTAGGTTGATA+CGG - chr6_1:6320855-6320874 None:intergenic 45.0%
CAGCTATCTGGATATGGAGA+TGG - chr6_1:6321306-6321325 None:intergenic 45.0%
CATCTCCATATCCAGATAGC+TGG + chr6_1:6321304-6321323 Msa0871440:CDS 45.0%
AGCTTCCAGCTATCTGGATA+TGG - chr6_1:6321312-6321331 None:intergenic 45.0%
ATATCCAGATAGCTGGAAGC+TGG + chr6_1:6321311-6321330 Msa0871440:CDS 45.0%
GGGTATCAAGTCTTCAGAAG+AGG + chr6_1:6321696-6321715 Msa0871440:CDS 45.0%
GCTGCTACAAGTAACAAACC+CGG - chr6_1:6321832-6321851 None:intergenic 45.0%
ATTGCTCAACTGGTGAGTAC+AGG + chr6_1:6321859-6321878 Msa0871440:intron 45.0%
CTGCAATTGAAGGGATTGGA+TGG + chr6_1:6322439-6322458 Msa0871440:intron 45.0%
GCAATTGAAGGGATTGGATG+GGG + chr6_1:6322441-6322460 Msa0871440:intron 45.0%
TCGATATGTATTGAGTGGCC+GGG + chr6_1:6322533-6322552 Msa0871440:intron 45.0%
CAAAAACAAGATCCCAAGCC+CGG - chr6_1:6322554-6322573 None:intergenic 45.0%
CATGCGCAAAGAACACTTCA+TGG + chr6_1:6322898-6322917 Msa0871440:CDS 45.0%
TAGAGAGTTGCACACACTCA+AGG + chr6_1:6323179-6323198 Msa0871440:CDS 45.0%
AGAGAGTTGCACACACTCAA+GGG + chr6_1:6323180-6323199 Msa0871440:CDS 45.0%
! CACACCACTAACAGAAGCAT+AGG - chr6_1:6323284-6323303 None:intergenic 45.0%
GCGTCTATGCTAATGCTTCA+TGG + chr6_1:6323435-6323454 Msa0871440:intron 45.0%
! ATGGCCTTGAGACAGCTTAT+GGG - chr6_1:6323720-6323739 None:intergenic 45.0%
CCTGACCGATATTCTTCCAA+GGG - chr6_1:6324088-6324107 None:intergenic 45.0%
ACCTGACCGATATTCTTCCA+AGG - chr6_1:6324089-6324108 None:intergenic 45.0%
CCAGATAGAACCAGATTGTG+CGG + chr6_1:6324419-6324438 Msa0871440:intron 45.0%
AACCAGATTGTGCGGCTAAA+TGG + chr6_1:6324427-6324446 Msa0871440:intron 45.0%
TTCCATTTAGCCGCACAATC+TGG - chr6_1:6324432-6324451 None:intergenic 45.0%
!!! CGACACTCATTTTGAAACGG+AGG - chr6_1:6325095-6325114 None:intergenic 45.0%
TCACATCACTTGAGAGGCAA+GGG - chr6_1:6325660-6325679 None:intergenic 45.0%
CTAAGGTAGTGACCACAAAG+TGG - chr6_1:6325717-6325736 None:intergenic 45.0%
! TTTTACAGTTGCACGTCGAG+AGG - chr6_1:6325961-6325980 None:intergenic 45.0%
GAGATGGAAGATAGAGATGG+TGG - chr6_1:6326571-6326590 None:intergenic 45.0%
TTATGGAAACGAGTGCCCTA+AGG + chr6_1:6326854-6326873 Msa0871440:intron 45.0%
TATGGAAACGAGTGCCCTAA+GGG + chr6_1:6326855-6326874 Msa0871440:intron 45.0%
!! GCCCTAAGGGCACTATATAA+AGG + chr6_1:6326868-6326887 Msa0871440:intron 45.0%
GCCTACAAACTAACTACGCA+AGG - chr6_1:6326950-6326969 None:intergenic 45.0%
ATGAGTCCCACCAAATCATG+TGG + chr6_1:6327270-6327289 Msa0871440:intron 45.0%
!! ATGGGACCACATGATTTGGT+GGG - chr6_1:6327279-6327298 None:intergenic 45.0%
! TATGGGACCACATGATTTGG+TGG - chr6_1:6327280-6327299 None:intergenic 45.0%
! CTTAAAGTGGCGGCTTTTGA+AGG - chr6_1:6327805-6327824 None:intergenic 45.0%
ACTCTCAACAAAAGCTGCTG+AGG + chr6_1:6328452-6328471 Msa0871440:CDS 45.0%
CAACAAACTTGAGGAGAAGC+AGG + chr6_1:6328497-6328516 Msa0871440:CDS 45.0%
! TCTTCTGTTGTGGCTTTTGC+AGG + chr6_1:6328869-6328888 Msa0871440:intron 45.0%
ATGGCTATTGCTTTGGCCAA+TGG + chr6_1:6328963-6328982 Msa0871440:CDS 45.0%
TAATGCTGCTGCAGCTCTTA+TGG + chr6_1:6329399-6329418 Msa0871440:intron 45.0%
GATGCTAGCATTCTTGTTCC+AGG + chr6_1:6329605-6329624 Msa0871440:intron 45.0%
GCTAGGTGATATTATCCCTG+CGG + chr6_1:6329646-6329665 Msa0871440:CDS 45.0%
ACTTACAGGTGAGTCTCTTC+CGG + chr6_1:6329812-6329831 Msa0871440:CDS 45.0%
CCCAGTGACAGTGTTTATTC+AGG + chr6_1:6329846-6329865 Msa0871440:CDS 45.0%
GCCTGAATAAACACTGTCAC+TGG - chr6_1:6329850-6329869 None:intergenic 45.0%
TTCAGGCTCTACATGCAAAC+AGG + chr6_1:6329863-6329882 Msa0871440:CDS 45.0%
TCAGGCTCTACATGCAAACA+GGG + chr6_1:6329864-6329883 Msa0871440:CDS 45.0%
ACCGGAGTTCATACCTTCTT+TGG + chr6_1:6329912-6329931 Msa0871440:CDS 45.0%
! GCCAAAGAAGGTATGAACTC+CGG - chr6_1:6329916-6329935 None:intergenic 45.0%
! GTCGACTCCACAAATCAAGT+CGG + chr6_1:6329951-6329970 Msa0871440:CDS 45.0%
TCGACTCCACAAATCAAGTC+GGG + chr6_1:6329952-6329971 Msa0871440:CDS 45.0%
!!! GCGTGTTTTTGGTTCTGCAA+CGG + chr6_1:6330018-6330037 Msa0871440:intron 45.0%
CAACACCGAAAATATCGTCC+AGG + chr6_1:6330208-6330227 Msa0871440:CDS 45.0%
CTACTTGTGCTTCTCATTGG+AGG + chr6_1:6330241-6330260 Msa0871440:CDS 45.0%
AGAACTGTAGGCATGGCAAT+AGG - chr6_1:6330271-6330290 None:intergenic 45.0%
AACTGACAGAACTGTAGGCA+TGG - chr6_1:6330278-6330297 None:intergenic 45.0%
GGACTCTTCGGGAAAACTTA+TGG - chr6_1:6330449-6330468 None:intergenic 45.0%
AAGTACTTGTGGGACTCTTC+GGG - chr6_1:6330460-6330479 None:intergenic 45.0%
GACAGCAATAGAAGAGATGG+CGG + chr6_1:6330574-6330593 Msa0871440:intron 45.0%
ACAGCAATAGAAGAGATGGC+GGG + chr6_1:6330575-6330594 Msa0871440:intron 45.0%
!! AATAGAAGAGATGGCGGGTA+TGG + chr6_1:6330580-6330599 Msa0871440:intron 45.0%
!! AGCATCTTGGTTTTCCACTC+TGG - chr6_1:6330821-6330840 None:intergenic 45.0%
GCTGCTATTATAGGGATGCT+AGG + chr6_1:6330847-6330866 Msa0871440:CDS 45.0%
GATGCTAGGTGATCCAAAAG+AGG + chr6_1:6330861-6330880 Msa0871440:CDS 45.0%
TAGCCTTCCCTTTCCTCATT+TGG + chr6_1:6331027-6331046 Msa0871440:intron 45.0%
! ACCAGCCCTTGCCTAATTTT+CGG - chr6_1:6331353-6331372 None:intergenic 45.0%
CGCTTGTCAGTAGGATTGAA+GGG - chr6_1:6331397-6331416 None:intergenic 45.0%
CCTTCAATCCTACTGACAAG+CGG + chr6_1:6331395-6331414 Msa0871440:CDS 45.0%
ATCGATAAATTTGCCGAGCG+AGG + chr6_1:6331623-6331642 Msa0871440:CDS 45.0%
TCGATAAATTTGCCGAGCGA+GGG + chr6_1:6331624-6331643 Msa0871440:CDS 45.0%
AAGAAAGCCAAGGAAGACCT+TGG + chr6_1:6319506-6319525 Msa0871440:five_prime_UTR 45.0%
TAAACTGCCAAGGTCTTCCT+TGG - chr6_1:6319516-6319535 None:intergenic 45.0%
GGAAGACCTTGGCAGTTTAT+CGG + chr6_1:6319517-6319536 Msa0871440:five_prime_UTR 45.0%
GAAGACCTTGGCAGTTTATC+GGG + chr6_1:6319518-6319537 Msa0871440:five_prime_UTR 45.0%
TGTCTAGGTGGGTCGAATAA+AGG - chr6_1:6319550-6319569 None:intergenic 45.0%
CTGCACTATCATGTCTAGGT+GGG - chr6_1:6319561-6319580 None:intergenic 45.0%
TCTGCACTATCATGTCTAGG+TGG - chr6_1:6319562-6319581 None:intergenic 45.0%
GTCTCTGCACTATCATGTCT+AGG - chr6_1:6319565-6319584 None:intergenic 45.0%
TTAGGCCAGAACAAGGATGA+AGG + chr6_1:6319855-6319874 Msa0871440:five_prime_UTR 45.0%
TCGTGAAACGTTTGCAAGCT+AGG + chr6_1:6320241-6320260 Msa0871440:five_prime_UTR 45.0%
ATATGTGGAATGACCGGTGA+TGG + chr6_1:6332558-6332577 Msa0871440:CDS 45.0%
CAGCTATCTGGATATGGAGA+TGG - chr6_1:6321306-6321325 None:intergenic 45.0%
CATCTCCATATCCAGATAGC+TGG + chr6_1:6321304-6321323 Msa0871440:CDS 45.0%
AGCTTCCAGCTATCTGGATA+TGG - chr6_1:6321312-6321331 None:intergenic 45.0%
ATATCCAGATAGCTGGAAGC+TGG + chr6_1:6321311-6321330 Msa0871440:CDS 45.0%
GCCACCAAGAATAATTCCAG+TGG - chr6_1:6333635-6333654 None:intergenic 45.0%
GGTCTCAAGTCTTCAGAAAG+AGG + chr6_1:6333983-6334002 Msa0871440:CDS 45.0%
GCTGCTACAAGTAACAAACC+CGG - chr6_1:6321832-6321851 None:intergenic 45.0%
ATTGCTCAACTGGTGAGTAC+AGG + chr6_1:6321859-6321878 Msa0871440:intron 45.0%
CTGCAATTGAAGGGATTGGA+TGG + chr6_1:6322439-6322458 Msa0871440:intron 45.0%
GCAATTGAAGGGATTGGATG+GGG + chr6_1:6322441-6322460 Msa0871440:intron 45.0%
TCGATATGTATTGAGTGGCC+GGG + chr6_1:6322533-6322552 Msa0871440:intron 45.0%
CAAAAACAAGATCCCAAGCC+CGG - chr6_1:6322554-6322573 None:intergenic 45.0%
CATGCGCAAAGAACACTTCA+TGG + chr6_1:6322898-6322917 Msa0871440:CDS 45.0%
!!! AATAATTTTTTTAAAGATAA+AGG - chr6_1:6325007-6325026 None:intergenic 5.0%
!! NNNATATAATAATCAATTAA+AGG + chr6_1:6325431-6325450 Msa0871440:intron 5.0%
!! NNATATAATAATCAATTAAA+GGG + chr6_1:6325432-6325451 Msa0871440:intron 5.0%
!!! TTATAATTTATTGATTTTTT+TGG + chr6_1:6325855-6325874 Msa0871440:intron 5.0%
!!! GATTTTTTTTTTTTAAAAAA+AGG - chr6_1:6325932-6325951 None:intergenic 5.0%
!!! ATTATTTATTTAATTTTGTT+AGG - chr6_1:6327408-6327427 None:intergenic 5.0%
ATGAGCCCGATAAACTGCCA+AGG - chr6_1:6319526-6319545 None:intergenic 50.0%
AAAGAAACAGGACGCCGTCT+AGG + chr6_1:6319798-6319817 Msa0871440:five_prime_UTR 50.0%
! GGATTTGCCGGTGTTTTTCC+TGG + chr6_1:6319921-6319940 Msa0871440:five_prime_UTR 50.0%
! TATTGCTCGACTGGTCAGCA+CGG - chr6_1:6320420-6320439 None:intergenic 50.0%
!! CTGGTCTTTTGTTGAGCGAC+CGG + chr6_1:6321810-6321829 Msa0871440:CDS 50.0%
! TGGTCTTTTGTTGAGCGACC+GGG + chr6_1:6321811-6321830 Msa0871440:CDS 50.0%
TTGAAGGGATTGGATGGGGT+TGG + chr6_1:6322445-6322464 Msa0871440:intron 50.0%
TGAAGGGATTGGATGGGGTT+GGG + chr6_1:6322446-6322465 Msa0871440:intron 50.0%
TGAACATCTTGGTCTCTGGC+GGG - chr6_1:6322930-6322949 None:intergenic 50.0%
CTGAACATCTTGGTCTCTGG+CGG - chr6_1:6322931-6322950 None:intergenic 50.0%
TCGCTGAACATCTTGGTCTC+TGG - chr6_1:6322934-6322953 None:intergenic 50.0%
TGTGCGTTCGCTGAACATCT+TGG - chr6_1:6322941-6322960 None:intergenic 50.0%
! TGGCCTTGAGACAGCTTATG+GGG - chr6_1:6323719-6323738 None:intergenic 50.0%
! GATGGCCTTGAGACAGCTTA+TGG - chr6_1:6323721-6323740 None:intergenic 50.0%
CCCTTGGAAGAATATCGGTC+AGG + chr6_1:6324085-6324104 Msa0871440:intron 50.0%
!! CCGCACAATCTGGTTCTATC+TGG - chr6_1:6324422-6324441 None:intergenic 50.0%
GTCACATCACTTGAGAGGCA+AGG - chr6_1:6325661-6325680 None:intergenic 50.0%
AACTGCTGACAAGTGCCCTA+AGG - chr6_1:6327689-6327708 None:intergenic 50.0%
!! GCGGCTTTTGAAGGACAACA+TGG - chr6_1:6327796-6327815 None:intergenic 50.0%
CAACAAAAGCTGCTGAGGAG+AGG + chr6_1:6328457-6328476 Msa0871440:CDS 50.0%
AAAAGCTGCTGAGGAGAGGT+TGG + chr6_1:6328461-6328480 Msa0871440:CDS 50.0%
! GAGGAGAGGTTGGCTATCTT+TGG + chr6_1:6328471-6328490 Msa0871440:CDS 50.0%
GTCAGTGTCAGTGTCATGTC+CGG + chr6_1:6328755-6328774 Msa0871440:intron 50.0%
GAATCCTCTCTCATGGGTGA+TGG + chr6_1:6328926-6328945 Msa0871440:CDS 50.0%
GATGGAAGCTGCAGCAATCA+TGG + chr6_1:6328944-6328963 Msa0871440:CDS 50.0%
GCTATTGCTTTGGCCAATGG+AGG + chr6_1:6328966-6328985 Msa0871440:CDS 50.0%
TCGGAAGCTTACTCCTCCAT+TGG - chr6_1:6328982-6329001 None:intergenic 50.0%
ACCGACGAAGTCTTGCCAAT+CGG - chr6_1:6329320-6329339 None:intergenic 50.0%
TCGCTTAGCGCCAAAAGCTA+AGG + chr6_1:6329423-6329442 Msa0871440:intron 50.0%
AGGTTCTTCGAGATGGGAGA+TGG + chr6_1:6329573-6329592 Msa0871440:intron 50.0%
GGTTCTTCGAGATGGGAGAT+GGG + chr6_1:6329574-6329593 Msa0871440:intron 50.0%
CAAGTAAACGAGCATCCGCA+GGG - chr6_1:6329664-6329683 None:intergenic 50.0%
TCAAGTAAACGAGCATCCGC+AGG - chr6_1:6329665-6329684 None:intergenic 50.0%
GCGGATGCTCGTTTACTTGA+AGG + chr6_1:6329665-6329684 Msa0871440:CDS 50.0%
CGGTTGTAGTCTGCACTTAC+AGG + chr6_1:6329798-6329817 Msa0871440:intron 50.0%
ATGAGCAGCCTTGCCAAAGA+AGG - chr6_1:6329928-6329947 None:intergenic 50.0%
! TCAAGTCGGGCATTTTCAGC+AGG + chr6_1:6329965-6329984 Msa0871440:CDS 50.0%
TGTCTACCTGCTGAGCTAAG+CGG - chr6_1:6330321-6330340 None:intergenic 50.0%
CGCAGATACCGTTGTTCTCA+TGG + chr6_1:6330783-6330802 Msa0871440:CDS 50.0%
AGGAAAGGGAAGGCTAGAGT+AGG - chr6_1:6331023-6331042 None:intergenic 50.0%
TCCGAAAATTAGGCAAGGGC+TGG + chr6_1:6331349-6331368 Msa0871440:intron 50.0%
CCGCTTGTCAGTAGGATTGA+AGG - chr6_1:6331398-6331417 None:intergenic 50.0%
ATGAGCCCGATAAACTGCCA+AGG - chr6_1:6319526-6319545 None:intergenic 50.0%
AAAGAAACAGGACGCCGTCT+AGG + chr6_1:6319798-6319817 Msa0871440:five_prime_UTR 50.0%
! GGATTTGCCGGTGTTTTTCC+TGG + chr6_1:6319921-6319940 Msa0871440:five_prime_UTR 50.0%
! TATTGCTCGACTGGTCAGCA+CGG - chr6_1:6320420-6320439 None:intergenic 50.0%
!! CTGGTCTTTTGTTGAGCGAC+CGG + chr6_1:6321810-6321829 Msa0871440:CDS 50.0%
! TGGTCTTTTGTTGAGCGACC+GGG + chr6_1:6321811-6321830 Msa0871440:CDS 50.0%
TTGAAGGGATTGGATGGGGT+TGG + chr6_1:6322445-6322464 Msa0871440:intron 50.0%
TGAAGGGATTGGATGGGGTT+GGG + chr6_1:6322446-6322465 Msa0871440:intron 50.0%
TGAACATCTTGGTCTCTGGC+GGG - chr6_1:6322930-6322949 None:intergenic 50.0%
CTGAACATCTTGGTCTCTGG+CGG - chr6_1:6322931-6322950 None:intergenic 50.0%
TCGCTGAACATCTTGGTCTC+TGG - chr6_1:6322934-6322953 None:intergenic 50.0%
TGTGCGTTCGCTGAACATCT+TGG - chr6_1:6322941-6322960 None:intergenic 50.0%
AACAGGACGCCGTCTAGGAA+TGG + chr6_1:6319803-6319822 Msa0871440:five_prime_UTR 55.0%
ACAGGACGCCGTCTAGGAAT+GGG + chr6_1:6319804-6319823 Msa0871440:five_prime_UTR 55.0%
TCTGCCAGCTTCCAGCTATC+TGG - chr6_1:6321318-6321337 None:intergenic 55.0%
CTGGCAGAGATCTTCACCAC+TGG + chr6_1:6321330-6321349 Msa0871440:CDS 55.0%
!! GGGGTTGGGCTGGTATTGTT+TGG + chr6_1:6322460-6322479 Msa0871440:intron 55.0%
ATGTATTGAGTGGCCGGGCT+TGG + chr6_1:6322538-6322557 Msa0871440:intron 55.0%
TGTATTGAGTGGCCGGGCTT+GGG + chr6_1:6322539-6322558 Msa0871440:intron 55.0%
CACCCCCATAAGCTGTCTCA+AGG + chr6_1:6323713-6323732 Msa0871440:intron 55.0%
GGCCTTGAGACAGCTTATGG+GGG - chr6_1:6323718-6323737 None:intergenic 55.0%
!! GGTTTGTTAACGGTGCCCTG+GGG - chr6_1:6323745-6323764 None:intergenic 55.0%
!! GGGTTTGTTAACGGTGCCCT+GGG - chr6_1:6323746-6323765 None:intergenic 55.0%
!! AGGGTTTGTTAACGGTGCCC+TGG - chr6_1:6323747-6323766 None:intergenic 55.0%
GCTTCCATCACCCATGAGAG+AGG - chr6_1:6328933-6328952 None:intergenic 55.0%
ACGAAGTCTTGCCAATCGGG+TGG - chr6_1:6329316-6329335 None:intergenic 55.0%
CCGACGAAGTCTTGCCAATC+GGG - chr6_1:6329319-6329338 None:intergenic 55.0%
CCCGATTGGCAAGACTTCGT+CGG + chr6_1:6329316-6329335 Msa0871440:CDS 55.0%
TCTTCGAGATGGGAGATGGG+TGG + chr6_1:6329577-6329596 Msa0871440:intron 55.0%
GAGTCTCTTCCGGTCACGAA+AGG + chr6_1:6329822-6329841 Msa0871440:CDS 55.0%
TCACTGGGACCTTTCGTGAC+CGG - chr6_1:6329834-6329853 None:intergenic 55.0%
ATCACACCGCTTAGCTCAGC+AGG + chr6_1:6330312-6330331 Msa0871440:CDS 55.0%
CCGAGCAGCCATGAGAACAA+CGG - chr6_1:6330794-6330813 None:intergenic 55.0%
CCGTTGTTCTCATGGCTGCT+CGG + chr6_1:6330791-6330810 Msa0871440:CDS 55.0%
CGTTGTTCTCATGGCTGCTC+GGG + chr6_1:6330792-6330811 Msa0871440:CDS 55.0%
! GGCAAGGGCTGGTATTCAAG+AGG + chr6_1:6331360-6331379 Msa0871440:intron 55.0%
AGAGCTGTCCGCTTGTCAGT+AGG - chr6_1:6331406-6331425 None:intergenic 55.0%
! TCGTGTCAGCAAAGGTGCAC+CGG + chr6_1:6331456-6331475 Msa0871440:CDS 55.0%
AATTTGCCGAGCGAGGGTTG+CGG + chr6_1:6331630-6331649 Msa0871440:CDS 55.0%
! GTCTCTTGCTGTAGCCTACC+AGG + chr6_1:6331652-6331671 Msa0871440:CDS 55.0%
AACAGGACGCCGTCTAGGAA+TGG + chr6_1:6319803-6319822 Msa0871440:five_prime_UTR 55.0%
ACAGGACGCCGTCTAGGAAT+GGG + chr6_1:6319804-6319823 Msa0871440:five_prime_UTR 55.0%
TCTGCCAGCTTCCAGCTATC+TGG - chr6_1:6321318-6321337 None:intergenic 55.0%
CTGGCAGAGATCTTCACCAC+TGG + chr6_1:6321330-6321349 Msa0871440:CDS 55.0%
!! GGGGTTGGGCTGGTATTGTT+TGG + chr6_1:6322460-6322479 Msa0871440:intron 55.0%
ATGTATTGAGTGGCCGGGCT+TGG + chr6_1:6322538-6322557 Msa0871440:intron 55.0%
TGTATTGAGTGGCCGGGCTT+GGG + chr6_1:6322539-6322558 Msa0871440:intron 55.0%
TTGTAACGCGGTCACGGAGC+TGG + chr6_1:6321791-6321810 Msa0871440:CDS 60.0%
TCGAGATGGGAGATGGGTGG+AGG + chr6_1:6329580-6329599 Msa0871440:intron 60.0%
AAGAGACCGCAACCCTCGCT+CGG - chr6_1:6331639-6331658 None:intergenic 60.0%
TTGTAACGCGGTCACGGAGC+TGG + chr6_1:6321791-6321810 Msa0871440:CDS 60.0%
GGGATTGGATGGGGTTGGGC+TGG + chr6_1:6322450-6322469 Msa0871440:intron 65.0%
TGTCTCAAGGCCATCGCCCC+AGG + chr6_1:6323726-6323745 Msa0871440:intron 65.0%
GTCTCAAGGCCATCGCCCCA+GGG + chr6_1:6323727-6323746 Msa0871440:intron 65.0%
TTAACGGTGCCCTGGGGCGA+TGG - chr6_1:6323739-6323758 None:intergenic 65.0%
! CAGCAAAGGTGCACCGGAGC+AGG + chr6_1:6331462-6331481 Msa0871440:CDS 65.0%
GGGATTGGATGGGGTTGGGC+TGG + chr6_1:6322450-6322469 Msa0871440:intron 65.0%
GGCTGCTCGGGCTTCCAGAG+TGG + chr6_1:6330804-6330823 Msa0871440:CDS 70.0%
Chromosome Type Strat End Strand Name
chr6_1 gene 6319371 6335567 6319371 ID=Msa0871440;Name=Msa0871440
chr6_1 mRNA 6319371 6335567 6319371 ID=Msa0871440-mRNA-1;Parent=Msa0871440;Name=Msa0871440-mRNA-1;_AED=0.24;_eAED=0.24;_QI=371|0.51|0.4|1|0.96|0.9|30|0|1163
chr6_1 exon 6319371 6319385 6319371 ID=Msa0871440-mRNA-1:exon:1966;Parent=Msa0871440-mRNA-1
chr6_1 exon 6319487 6319631 6319487 ID=Msa0871440-mRNA-1:exon:1967;Parent=Msa0871440-mRNA-1
chr6_1 exon 6319778 6319942 6319778 ID=Msa0871440-mRNA-1:exon:1968;Parent=Msa0871440-mRNA-1
chr6_1 exon 6320226 6320463 6320226 ID=Msa0871440-mRNA-1:exon:1969;Parent=Msa0871440-mRNA-1
chr6_1 exon 6320553 6320585 6320553 ID=Msa0871440-mRNA-1:exon:1970;Parent=Msa0871440-mRNA-1
chr6_1 exon 6320673 6320754 6320673 ID=Msa0871440-mRNA-1:exon:1971;Parent=Msa0871440-mRNA-1
chr6_1 exon 6321268 6321386 6321268 ID=Msa0871440-mRNA-1:exon:1972;Parent=Msa0871440-mRNA-1
chr6_1 exon 6321655 6321870 6321655 ID=Msa0871440-mRNA-1:exon:1973;Parent=Msa0871440-mRNA-1
chr6_1 exon 6322841 6323019 6322841 ID=Msa0871440-mRNA-1:exon:1974;Parent=Msa0871440-mRNA-1
chr6_1 exon 6323176 6323266 6323176 ID=Msa0871440-mRNA-1:exon:1975;Parent=Msa0871440-mRNA-1
chr6_1 exon 6328399 6328518 6328399 ID=Msa0871440-mRNA-1:exon:1976;Parent=Msa0871440-mRNA-1
chr6_1 exon 6328891 6328989 6328891 ID=Msa0871440-mRNA-1:exon:1977;Parent=Msa0871440-mRNA-1
chr6_1 exon 6329307 6329337 6329307 ID=Msa0871440-mRNA-1:exon:1978;Parent=Msa0871440-mRNA-1
chr6_1 exon 6329627 6329709 6329627 ID=Msa0871440-mRNA-1:exon:1979;Parent=Msa0871440-mRNA-1
chr6_1 exon 6329807 6329986 6329807 ID=Msa0871440-mRNA-1:exon:1980;Parent=Msa0871440-mRNA-1
chr6_1 exon 6330127 6330333 6330127 ID=Msa0871440-mRNA-1:exon:1981;Parent=Msa0871440-mRNA-1
chr6_1 exon 6330590 6330673 6330590 ID=Msa0871440-mRNA-1:exon:1982;Parent=Msa0871440-mRNA-1
chr6_1 exon 6330763 6330882 6330763 ID=Msa0871440-mRNA-1:exon:1983;Parent=Msa0871440-mRNA-1
chr6_1 exon 6331361 6331483 6331361 ID=Msa0871440-mRNA-1:exon:1984;Parent=Msa0871440-mRNA-1
chr6_1 exon 6331569 6331673 6331569 ID=Msa0871440-mRNA-1:exon:1985;Parent=Msa0871440-mRNA-1
chr6_1 exon 6331775 6331877 6331775 ID=Msa0871440-mRNA-1:exon:1986;Parent=Msa0871440-mRNA-1
chr6_1 exon 6332066 6332230 6332066 ID=Msa0871440-mRNA-1:exon:1987;Parent=Msa0871440-mRNA-1
chr6_1 exon 6332514 6332752 6332514 ID=Msa0871440-mRNA-1:exon:1988;Parent=Msa0871440-mRNA-1
chr6_1 exon 6332842 6332874 6332842 ID=Msa0871440-mRNA-1:exon:1989;Parent=Msa0871440-mRNA-1
chr6_1 exon 6332960 6333041 6332960 ID=Msa0871440-mRNA-1:exon:1990;Parent=Msa0871440-mRNA-1
chr6_1 exon 6333554 6333714 6333554 ID=Msa0871440-mRNA-1:exon:1991;Parent=Msa0871440-mRNA-1
chr6_1 exon 6333972 6334157 6333972 ID=Msa0871440-mRNA-1:exon:1992;Parent=Msa0871440-mRNA-1
chr6_1 exon 6334688 6334870 6334688 ID=Msa0871440-mRNA-1:exon:1993;Parent=Msa0871440-mRNA-1
chr6_1 exon 6335133 6335311 6335133 ID=Msa0871440-mRNA-1:exon:1994;Parent=Msa0871440-mRNA-1
chr6_1 exon 6335471 6335567 6335471 ID=Msa0871440-mRNA-1:exon:1995;Parent=Msa0871440-mRNA-1
chr6_1 five_prime_UTR 6319371 6319385 6319371 ID=Msa0871440-mRNA-1:five_prime_utr;Parent=Msa0871440-mRNA-1
chr6_1 five_prime_UTR 6319487 6319631 6319487 ID=Msa0871440-mRNA-1:five_prime_utr;Parent=Msa0871440-mRNA-1
chr6_1 five_prime_UTR 6319778 6319942 6319778 ID=Msa0871440-mRNA-1:five_prime_utr;Parent=Msa0871440-mRNA-1
chr6_1 five_prime_UTR 6320226 6320271 6320226 ID=Msa0871440-mRNA-1:five_prime_utr;Parent=Msa0871440-mRNA-1
chr6_1 CDS 6320272 6320463 6320272 ID=Msa0871440-mRNA-1:cds;Parent=Msa0871440-mRNA-1
chr6_1 CDS 6320553 6320585 6320553 ID=Msa0871440-mRNA-1:cds;Parent=Msa0871440-mRNA-1
chr6_1 CDS 6320673 6320754 6320673 ID=Msa0871440-mRNA-1:cds;Parent=Msa0871440-mRNA-1
chr6_1 CDS 6321268 6321386 6321268 ID=Msa0871440-mRNA-1:cds;Parent=Msa0871440-mRNA-1
chr6_1 CDS 6321655 6321870 6321655 ID=Msa0871440-mRNA-1:cds;Parent=Msa0871440-mRNA-1
chr6_1 CDS 6322841 6323019 6322841 ID=Msa0871440-mRNA-1:cds;Parent=Msa0871440-mRNA-1
chr6_1 CDS 6323176 6323266 6323176 ID=Msa0871440-mRNA-1:cds;Parent=Msa0871440-mRNA-1
chr6_1 CDS 6328399 6328518 6328399 ID=Msa0871440-mRNA-1:cds;Parent=Msa0871440-mRNA-1
chr6_1 CDS 6328891 6328989 6328891 ID=Msa0871440-mRNA-1:cds;Parent=Msa0871440-mRNA-1
chr6_1 CDS 6329307 6329337 6329307 ID=Msa0871440-mRNA-1:cds;Parent=Msa0871440-mRNA-1
chr6_1 CDS 6329627 6329709 6329627 ID=Msa0871440-mRNA-1:cds;Parent=Msa0871440-mRNA-1
chr6_1 CDS 6329807 6329986 6329807 ID=Msa0871440-mRNA-1:cds;Parent=Msa0871440-mRNA-1
chr6_1 CDS 6330127 6330333 6330127 ID=Msa0871440-mRNA-1:cds;Parent=Msa0871440-mRNA-1
chr6_1 CDS 6330590 6330673 6330590 ID=Msa0871440-mRNA-1:cds;Parent=Msa0871440-mRNA-1
chr6_1 CDS 6330763 6330882 6330763 ID=Msa0871440-mRNA-1:cds;Parent=Msa0871440-mRNA-1
chr6_1 CDS 6331361 6331483 6331361 ID=Msa0871440-mRNA-1:cds;Parent=Msa0871440-mRNA-1
chr6_1 CDS 6331569 6331673 6331569 ID=Msa0871440-mRNA-1:cds;Parent=Msa0871440-mRNA-1
chr6_1 CDS 6331775 6331877 6331775 ID=Msa0871440-mRNA-1:cds;Parent=Msa0871440-mRNA-1
chr6_1 CDS 6332066 6332230 6332066 ID=Msa0871440-mRNA-1:cds;Parent=Msa0871440-mRNA-1
chr6_1 CDS 6332514 6332752 6332514 ID=Msa0871440-mRNA-1:cds;Parent=Msa0871440-mRNA-1
chr6_1 CDS 6332842 6332874 6332842 ID=Msa0871440-mRNA-1:cds;Parent=Msa0871440-mRNA-1
chr6_1 CDS 6332960 6333041 6332960 ID=Msa0871440-mRNA-1:cds;Parent=Msa0871440-mRNA-1
chr6_1 CDS 6333554 6333714 6333554 ID=Msa0871440-mRNA-1:cds;Parent=Msa0871440-mRNA-1
chr6_1 CDS 6333972 6334157 6333972 ID=Msa0871440-mRNA-1:cds;Parent=Msa0871440-mRNA-1
chr6_1 CDS 6334688 6334870 6334688 ID=Msa0871440-mRNA-1:cds;Parent=Msa0871440-mRNA-1
chr6_1 CDS 6335133 6335311 6335133 ID=Msa0871440-mRNA-1:cds;Parent=Msa0871440-mRNA-1
chr6_1 CDS 6335471 6335567 6335471 ID=Msa0871440-mRNA-1:cds;Parent=Msa0871440-mRNA-1
Gene Sequence

>Msa0871440

ATGTGGAATGACCGTGATGGTGTTAATGATGCTCCTGCTCTTAAGAAAGCAGATATTGGAATAGCTGTTGACGATGCAACTGATGCAGCTCGTAGTGCTTCCGACATTGTTCTAACAGAACCAGGTCTCAGTGTTATCATTAGCGCCGTGCTGACCAGTCGAGCAATATTCCAAAGAATGAAGAATTACACAATTTATGCAGTTTCGATCACGATCCGTATTGTACTTGGTTTCATGTTACTGGCACTCATATGGCAATTTGATTTTCCACCATTCATGGTACTGATTATTGCTATTCTTAATGATGGTACAATTATGACAATATCTAAGGATAGAGTAAAGCCATCTCCATATCCAGATAGCTGGAAGCTGGCAGAGATCTTCACCACTGGAATTATTCTTGGTGGTTATTTGGCTATGATGACATTTAATAGTTATACTCATTATGTAATTTTCAGAGCACATTTGGGTATCAAGTCTTCAGAAGAGGATAGGGATGATATTAGAAAGCTTGCCTCAGCAATATACCTACAAGTTAGTACAATTAGTCAGGCCCTTATATTTGTAACGCGGTCACGGAGCTGGTCTTTTGTTGAGCGACCGGGTTTGTTACTTGTAGCAGCTTTTGTCATTGCTCAACTGATTGCTTTTACAAGGAAGAAAGATTTTGGAAAGGAAGAACGCGAACTTAAATGGGCGCATGCGCAAAGAACACTTCATGGTCTTCACCCGCCAGAGACCAAGATGTTCAGCGAACGCACAAATTATACAGAGCTTAATCAGATGGCTGAAGAAGCTAAAAAACGAGCGGAAATTGCAAGAATTAGAGAGTTGCACACACTCAAGGGCCATGTTGAGTCAGTTGTTAGAATGAAGGGTCTTGACATTGACACAATACAGCAAGCATACACTGAAAATGTGCCAATTGAGGAAGTGTTTCAAACTTTGAGGTGTGATTCAAATGGACTCTCAACAAAAGCTGCTGAGGAGAGGTTGGCTATCTTTGGTCACAACAAACTTGAGGAGAAGCAGGAAAGCAAGTTTTTGAAGTTTTTGGGATTTATGTGGAATCCTCTCTCATGGGTGATGGAAGCTGCAGCAATCATGGCTATTGCTTTGGCCAATGGAGGAAATAAACCACCCGATTGGCAAGACTTCGTCGGCGATATAATTAGTGTTAAGCTAGGTGATATTATCCCTGCGGATGCTCGTTTACTTGAAGGTGATCCGTTGAAGATTGATCAGTCTGCACTTACAGGTGAGTCTCTTCCGGTCACGAAAGGTCCCAGTGACAGTGTTTATTCAGGCTCTACATGCAAACAGGGAGAGATAGAAGCAGTTGTTATTGCAACCGGAGTTCATACCTTCTTTGGCAAGGCTGCTCATCTAGTCGACTCCACAAATCAAGTCGGGCATTTTCAGCAGGTCCTAACTTCAATTGGGAACTTTTGTATATGTTCAATTGCTGTGGGAATGATAGTTGAGATCATTGTCATGTACCCAATTCAACACCGAAAATATCGTCCAGGGATTGATAATCTACTTGTGCTTCTCATTGGAGGAATTCCTATTGCCATGCCTACAGTTCTGTCAGTTACAATGGCAATCGGATCACACCGCTTAGCTCAGCAGATGGCGGGTATGGACGTATTGTGCAGTGACAAAACTGGAACTTTGACTTTGAATAAACTATCTGTTGACAAGAATCTTATTGAGATTTTTGCTAAAGGAGTTGACGCAGATACCGTTGTTCTCATGGCTGCTCGGGCTTCCAGAGTGGAAAACCAAGATGCTATAGATGCTGCTATTATAGGGATGCTAGGTGATCCAAAAGAGGCAAGGGCTGGTATTCAAGAGGTTCACTTTCTTCCCTTCAATCCTACTGACAAGCGGACAGCTCTAACTTATATAGACAGTGAACGTAAAATGCATCGTGTCAGCAAAGGTGCACCGGAGCAGATTTTGAATCTTGCACATAATAAGTCAGAGATAGAACGCAGAGTTCATGCAGTCATCGATAAATTTGCCGAGCGAGGGTTGCGGTCTCTTGCTGTAGCCTACCAGGAAGTTCCTGATGGAAAGAAAGAAAGCCAAGGAAGACCTTGGCAGTTTATCGGGCTCATGCCTTTATTCGACCCACCTAGACATGATAGTGCAGAGACGATAAGTGATCAACTATCAATAGCGAAAGAAACAGGACGCCGTCTAGGAATGGGAACTAACATGTACCCTTCATCAGCTTTATTAGGCCAGAACAAGGATGAAGGAATTGGCCTCTTACCAGTTGATGATTTGATTGAAAAAGCTGATGGATTTGCCGGTGTTTTTCCTGAACACAAATATGAGATCGTGAAACGTTTGCAAGCTAGGAAACACATATGTGGAATGACCGGTGATGGTGTTAATGATGCTCCTGCTCTTAAGAAAGCAGATATTGGAATAGCTGTTGACGATGCAACTGATGCAGCTCGTAGTGCTTCCGACATTGTTCTAACAGAACCAGGTCTCAGTGTTATCATTAGCGCCGTGCTGACCAGTCGAGCAATATTCCAAAGAATGAAGAATTACACAATTTATGCAGTTTCGATCACGATCCGTATTGTACTTGGTTTCATGTTACTGGCACTCATATGGCAATTTGATTTTCCACCATTCATGGTACTGATTATTGCTATTCTTAATGATGGTACAATTATGACAATATCTAAGGATAGAGTAAAGCCATCTCCATATCCAGATAGCTGGAAGCTGGCAGAGATCTTCACCACTGGAATTATTCTTGGTGGCTATTTGGCTATGATGACAGTCATTTTCTTTTGGGCAGCATATAAAACAGATTTTTTCCCTAGCACATTTGGGGTCTCAAGTCTTCAGAAAGAGGATAGGGATGATATTAGAAAGCTTGCCTCAGCAATATACCTACAAGTTAGTACAATTAGTCAGGCCCTTATATTTGTAACGCGGTCACGGAGCTGGTCTTTTGTTGAGCGACCGGGTTTGTTACTTGTAGCAGCTTTTGTCATTGCTCAACTGATAGCTACGTTGATTGCCGTTTATGCAAACTGGAGTTTTGCTGCAATTGAAGGGATTGGATGGGGTTGGGCTGGTATTGTTTGGCTTTACAATCTCATCTTTTATATTCCACTTGATTTTATCAAGGTCATAATTCGATATGTATTGAGTGGCCGGGCTTGGGATCTTGTTTTTGAACAAAGGATTGCTTTTACAAGGAAGAAAGATTTTGGAAAGGAAGAACGCGAACTTAAATGGGCGCATGCGCAAAGAACACTTCATGGTCTTCACCCGCCAGAGACCAAGATGTTCAGCGAACGCACAAATTATACAGAGCTTAATCAGATGGCTGAAGAAGCTAAAAAACGAGCGGAAATTGCAAGAATTAGAGAGTTGCACACACTTAAGGGCCATGTTGAGTCAGTTGTTAGAATGAAGGGTCTTGACATTGACACAATACAGCAAGCATACACTGTATAA
Protein sequence

>Msa0871440

MWNDRDGVNDAPALKKADIGIAVDDATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLALIWQFDFPPFMVLIIAILNDGTIMTISKDRVKPSPYPDSWKLAEIFTTGIILGGYLAMMTFNSYTHYVIFRAHLGIKSSEEDRDDIRKLASAIYLQVSTISQALIFVTRSRSWSFVERPGLLLVAAFVIAQLIAFTRKKDFGKEERELKWAHAQRTLHGLHPPETKMFSERTNYTELNQMAEEAKKRAEIARIRELHTLKGHVESVVRMKGLDIDTIQQAYTENVPIEEVFQTLRCDSNGLSTKAAEERLAIFGHNKLEEKQESKFLKFLGFMWNPLSWVMEAAAIMAIALANGGNKPPDWQDFVGDIISVKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPSDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQQVLTSIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLAQQMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDADTVVLMAARASRVENQDAIDAAIIGMLGDPKEARAGIQEVHFLPFNPTDKRTALTYIDSERKMHRVSKGAPEQILNLAHNKSEIERRVHAVIDKFAERGLRSLAVAYQEVPDGKKESQGRPWQFIGLMPLFDPPRHDSAETISDQLSIAKETGRRLGMGTNMYPSSALLGQNKDEGIGLLPVDDLIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVDDATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLALIWQFDFPPFMVLIIAILNDGTIMTISKDRVKPSPYPDSWKLAEIFTTGIILGGYLAMMTVIFFWAAYKTDFFPSTFGVSSLQKEDRDDIRKLASAIYLQVSTISQALIFVTRSRSWSFVERPGLLLVAAFVIAQLIATLIAVYANWSFAAIEGIGWGWAGIVWLYNLIFYIPLDFIKVIIRYVLSGRAWDLVFEQRIAFTRKKDFGKEERELKWAHAQRTLHGLHPPETKMFSERTNYTELNQMAEEAKKRAEIARIRELHTLKGHVESVVRMKGLDIDTIQQAYTV*