Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0875150 | XP_024641605.1 | 79.183 | 759 | 86 | 6 | 1 | 694 | 1 | 752 | 0.0 | 1182 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0875150 | A0A396HG96 | 72.619 | 756 | 138 | 7 | 1 | 694 | 1 | 749 | 0.0 | 1062 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0380340 | Msa0875150 | 0.822080 | 2.868294e-53 | -8.615850e-47 |
Msa0875150 | Msa0875160 | 0.839380 | 1.639982e-57 | -8.615850e-47 |
Msa0875150 | Msa0894480 | 0.811516 | 6.732980e-51 | -8.615850e-47 |
Msa0875150 | Msa1076460 | 0.812533 | 4.042453e-51 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0875150 | MtrunA17_Chr6g0456101 | 72.619 | 756 | 138 | 7 | 1 | 694 | 1 | 749 | 0.0 | 1062 |
Msa0875150 | MtrunA17_Chr6g0457101 | 76.143 | 700 | 157 | 4 | 1 | 694 | 1 | 696 | 0.0 | 1038 |
Msa0875150 | MtrunA17_Chr6g0456141 | 89.595 | 346 | 35 | 1 | 349 | 694 | 48 | 392 | 0.0 | 633 |
Msa0875150 | MtrunA17_Chr5g0410341 | 45.910 | 758 | 326 | 16 | 1 | 686 | 1 | 746 | 0.0 | 596 |
Msa0875150 | MtrunA17_Chr5g0410171 | 45.442 | 735 | 333 | 15 | 2 | 679 | 4 | 727 | 0.0 | 583 |
Msa0875150 | MtrunA17_Chr6g0456151 | 84.965 | 286 | 28 | 1 | 1 | 271 | 1 | 286 | 9.39e-174 | 497 |
Msa0875150 | MtrunA17_Chr5g0410201 | 58.788 | 330 | 129 | 3 | 364 | 691 | 5 | 329 | 3.04e-129 | 385 |
Msa0875150 | MtrunA17_Chr5g0410271 | 57.547 | 318 | 132 | 2 | 364 | 679 | 4 | 320 | 3.45e-126 | 377 |
Msa0875150 | MtrunA17_Chr5g0410461 | 54.655 | 333 | 145 | 4 | 352 | 679 | 127 | 458 | 1.05e-107 | 335 |
Msa0875150 | MtrunA17_Chr5g0410371 | 57.525 | 299 | 123 | 2 | 394 | 688 | 1 | 299 | 2.10e-105 | 323 |
Msa0875150 | MtrunA17_Chr5g0410581 | 45.198 | 354 | 178 | 6 | 347 | 688 | 450 | 799 | 2.19e-88 | 293 |
Msa0875150 | MtrunA17_Chr5g0410581 | 34.483 | 319 | 155 | 8 | 7 | 279 | 8 | 318 | 2.88e-38 | 152 |
Msa0875150 | MtrunA17_Chr2g0297701 | 31.986 | 569 | 335 | 12 | 118 | 682 | 48 | 568 | 4.69e-76 | 255 |
Msa0875150 | MtrunA17_Chr5g0410191 | 58.378 | 185 | 77 | 0 | 495 | 679 | 2 | 186 | 2.94e-68 | 222 |
Msa0875150 | MtrunA17_Chr5g0443001 | 32.072 | 608 | 369 | 17 | 102 | 686 | 18 | 604 | 2.82e-66 | 229 |
Msa0875150 | MtrunA17_Chr2g0297691 | 29.193 | 644 | 374 | 18 | 73 | 682 | 95 | 690 | 3.79e-61 | 218 |
Msa0875150 | MtrunA17_Chr2g0297681 | 29.721 | 646 | 366 | 20 | 66 | 672 | 85 | 681 | 1.10e-60 | 216 |
Msa0875150 | MtrunA17_Chr3g0100741 | 28.819 | 576 | 349 | 16 | 119 | 666 | 37 | 579 | 5.16e-59 | 209 |
Msa0875150 | MtrunA17_Chr2g0297651 | 28.169 | 639 | 377 | 16 | 73 | 683 | 96 | 680 | 6.37e-58 | 208 |
Msa0875150 | MtrunA17_Chr2g0297491 | 38.621 | 290 | 176 | 2 | 394 | 682 | 88 | 376 | 2.80e-56 | 196 |
Msa0875150 | MtrunA17_Chr2g0297481 | 36.897 | 290 | 177 | 4 | 394 | 682 | 186 | 470 | 2.47e-52 | 188 |
Msa0875150 | MtrunA17_Chr3g0100301 | 48.663 | 187 | 95 | 1 | 483 | 668 | 208 | 394 | 5.51e-51 | 182 |
Msa0875150 | MtrunA17_Chr5g0410541 | 45.226 | 199 | 103 | 3 | 495 | 688 | 23 | 220 | 1.01e-49 | 173 |
Msa0875150 | MtrunA17_Chr2g0297711 | 34.839 | 310 | 190 | 6 | 367 | 668 | 206 | 511 | 3.28e-49 | 181 |
Msa0875150 | MtrunA17_Chr5g0410451 | 44.554 | 202 | 107 | 2 | 490 | 686 | 36 | 237 | 1.91e-48 | 170 |
Msa0875150 | MtrunA17_Chr3g0096941 | 25.391 | 575 | 351 | 9 | 118 | 655 | 36 | 569 | 8.19e-46 | 172 |
Msa0875150 | MtrunA17_Chr2g0286601 | 30.503 | 318 | 208 | 4 | 376 | 685 | 369 | 681 | 2.95e-41 | 160 |
Msa0875150 | MtrunA17_Chr3g0098481 | 33.716 | 261 | 164 | 4 | 393 | 647 | 35 | 292 | 1.99e-40 | 151 |
Msa0875150 | MtrunA17_Chr5g0410181 | 52.756 | 127 | 60 | 0 | 553 | 679 | 1 | 127 | 6.55e-38 | 137 |
Msa0875150 | MtrunA17_Chr5g0410511 | 39.801 | 201 | 106 | 5 | 495 | 685 | 2 | 197 | 8.77e-37 | 137 |
Msa0875150 | MtrunA17_Chr3g0102001 | 31.908 | 304 | 188 | 5 | 393 | 684 | 440 | 736 | 6.99e-36 | 144 |
Msa0875150 | MtrunA17_Chr2g0286551 | 33.123 | 317 | 186 | 6 | 374 | 677 | 347 | 650 | 3.82e-34 | 139 |
Msa0875150 | MtrunA17_Chr5g0410291 | 45.238 | 168 | 78 | 5 | 135 | 295 | 3 | 163 | 7.78e-34 | 129 |
Msa0875150 | MtrunA17_Chr5g0410411 | 35.938 | 320 | 141 | 13 | 1 | 271 | 1 | 305 | 2.01e-32 | 128 |
Msa0875150 | MtrunA17_Chr5g0439061 | 31.849 | 292 | 189 | 5 | 395 | 679 | 438 | 726 | 2.05e-32 | 134 |
Msa0875150 | MtrunA17_Chr2g0284501 | 33.096 | 281 | 180 | 4 | 390 | 668 | 365 | 639 | 4.20e-31 | 129 |
Msa0875150 | MtrunA17_Chr2g0284541 | 32.781 | 302 | 194 | 4 | 370 | 668 | 326 | 621 | 1.16e-30 | 128 |
Msa0875150 | MtrunA17_Chr5g0410501 | 42.135 | 178 | 96 | 4 | 326 | 500 | 121 | 294 | 3.36e-30 | 121 |
Msa0875150 | MtrunA17_Chr5g0410211 | 46.541 | 159 | 72 | 6 | 146 | 296 | 12 | 165 | 5.04e-30 | 117 |
Msa0875150 | MtrunA17_Chr1g0211541 | 28.788 | 330 | 214 | 8 | 366 | 688 | 190 | 505 | 1.15e-29 | 124 |
Msa0875150 | MtrunA17_Chr3g0098301 | 29.730 | 259 | 177 | 3 | 393 | 647 | 101 | 358 | 1.25e-28 | 119 |
Msa0875150 | MtrunA17_Chr2g0286561 | 28.571 | 196 | 139 | 1 | 485 | 679 | 5 | 200 | 4.29e-26 | 107 |
Msa0875150 | MtrunA17_Chr5g0410551 | 50.476 | 105 | 51 | 1 | 394 | 497 | 1 | 105 | 1.51e-25 | 102 |
Msa0875150 | MtrunA17_Chr6g0458041 | 39.873 | 158 | 88 | 5 | 117 | 268 | 1 | 157 | 3.13e-25 | 102 |
Msa0875150 | MtrunA17_Chr3g0098531 | 26.071 | 280 | 184 | 6 | 415 | 680 | 10 | 280 | 1.89e-24 | 104 |
Msa0875150 | MtrunA17_Chr5g0410561 | 35.909 | 220 | 129 | 6 | 56 | 271 | 2 | 213 | 7.44e-24 | 100 |
Msa0875150 | MtrunA17_Chr5g0410251 | 46.429 | 112 | 50 | 3 | 4 | 109 | 2 | 109 | 2.90e-23 | 95.1 |
Msa0875150 | MtrunA17_Chr5g0410441 | 55.682 | 88 | 38 | 1 | 409 | 495 | 1 | 88 | 3.59e-23 | 95.1 |
Msa0875150 | MtrunA17_Chr5g0410471 | 39.216 | 204 | 100 | 8 | 52 | 245 | 123 | 312 | 4.22e-23 | 100 |
Msa0875150 | MtrunA17_Chr5g0410471 | 39.823 | 113 | 55 | 6 | 1 | 109 | 2 | 105 | 1.43e-11 | 66.2 |
Msa0875150 | MtrunA17_Chr5g0439081 | 29.480 | 173 | 119 | 2 | 497 | 668 | 18 | 188 | 2.68e-22 | 95.9 |
Msa0875150 | MtrunA17_Chr5g0410381 | 43.382 | 136 | 74 | 2 | 146 | 279 | 39 | 173 | 4.04e-22 | 96.3 |
Msa0875150 | MtrunA17_Chr1g0211531 | 25.795 | 283 | 204 | 5 | 393 | 670 | 239 | 520 | 2.44e-21 | 98.6 |
Msa0875150 | MtrunA17_Chr1g0211511 | 29.218 | 243 | 168 | 4 | 392 | 632 | 15 | 255 | 2.91e-20 | 92.8 |
Msa0875150 | MtrunA17_Chr3g0100921 | 39.024 | 123 | 74 | 1 | 544 | 665 | 2 | 124 | 7.17e-20 | 86.7 |
Msa0875150 | MtrunA17_Chr5g0439051 | 32.065 | 184 | 123 | 2 | 497 | 679 | 22 | 204 | 7.68e-20 | 89.0 |
Msa0875150 | MtrunA17_Chr2g0297521 | 41.176 | 85 | 49 | 1 | 487 | 571 | 1 | 84 | 3.53e-13 | 65.5 |
Msa0875150 | MtrunA17_Chr2g0297611 | 34.831 | 89 | 57 | 1 | 503 | 591 | 3 | 90 | 4.41e-13 | 65.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0875150 | AT3G18670.1 | 33.453 | 559 | 313 | 13 | 133 | 679 | 68 | 579 | 2.10e-89 | 291 |
Msa0875150 | AT3G18670.2 | 32.821 | 585 | 337 | 14 | 133 | 679 | 68 | 634 | 1.45e-87 | 288 |
Msa0875150 | AT5G04700.1 | 31.588 | 554 | 342 | 14 | 151 | 682 | 116 | 654 | 4.66e-71 | 244 |
Msa0875150 | AT5G04690.1 | 33.333 | 462 | 275 | 8 | 222 | 682 | 181 | 610 | 1.35e-68 | 236 |
Msa0875150 | AT5G04690.2 | 32.143 | 476 | 296 | 9 | 222 | 682 | 181 | 644 | 3.84e-67 | 233 |
Msa0875150 | AT5G04690.3 | 31.915 | 470 | 291 | 8 | 222 | 682 | 181 | 630 | 3.54e-65 | 228 |
Msa0875150 | AT5G04730.1 | 32.035 | 462 | 290 | 8 | 224 | 669 | 121 | 574 | 5.22e-65 | 226 |
Msa0875150 | AT5G04680.2 | 30.453 | 486 | 304 | 8 | 222 | 682 | 50 | 526 | 1.00e-62 | 218 |
Msa0875150 | AT5G04680.4 | 30.453 | 486 | 304 | 8 | 222 | 682 | 173 | 649 | 5.08e-62 | 219 |
Msa0875150 | AT5G35810.1 | 42.857 | 259 | 142 | 2 | 394 | 646 | 35 | 293 | 6.47e-62 | 211 |
Msa0875150 | AT5G04680.3 | 30.480 | 479 | 299 | 9 | 222 | 682 | 173 | 635 | 3.73e-60 | 214 |
Msa0875150 | AT5G04680.1 | 30.000 | 510 | 304 | 9 | 222 | 682 | 173 | 678 | 6.37e-60 | 214 |
Msa0875150 | AT3G54065.1 | 46.243 | 173 | 87 | 1 | 480 | 646 | 7 | 179 | 1.15e-43 | 157 |
Msa0875150 | AT5G04700.2 | 25.410 | 366 | 238 | 12 | 151 | 496 | 116 | 466 | 1.95e-19 | 92.4 |
Find 117 sgRNAs with CRISPR-Local
Find 778 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GCAGGGAAATTTCAACTTAT+TGG | 0.132566 | 6_1:+11335443 | Msa0875150:CDS |
CTGTCTCACAATTTCTAATT+TGG | 0.166001 | 6_1:-11329985 | None:intergenic |
GATTTCCAATTAGGCTTTCT+AGG | 0.191437 | 6_1:-11329905 | None:intergenic |
CACGAAGGAGTTGGTTAAAA+TGG | 0.194880 | 6_1:+11330255 | Msa0875150:CDS |
CTAGACAACGATTATTATTA+TGG | 0.217561 | 6_1:+11330514 | Msa0875150:CDS |
TTGCCGACGAAATTATTATT+TGG | 0.219238 | 6_1:+11341883 | Msa0875150:CDS |
TGCATCCATGCAGAAATATT+TGG | 0.241282 | 6_1:+11330556 | Msa0875150:CDS |
AAGAGAACTTCAATGGTTTA+AGG | 0.248534 | 6_1:+11335967 | Msa0875150:CDS |
AGAAGATATATGAGATAAAA+AGG | 0.265602 | 6_1:+11335561 | Msa0875150:CDS |
TATGAGATAAAAGGCCAAAA+AGG | 0.279014 | 6_1:+11335833 | Msa0875150:CDS |
TATTTACTGTATTTATTAAT+CGG | 0.284990 | 6_1:+11342177 | Msa0875150:three_prime_UTR |
TCGATCCTAGAAAGCCTAAT+TGG | 0.305654 | 6_1:+11329900 | Msa0875150:CDS |
GCAGCAGCTTTCACTGTTCC+AGG | 0.307371 | 6_1:+11341697 | Msa0875150:CDS |
CTGCACCTAGCAGCTGAATT+AGG | 0.313835 | 6_1:+11335896 | Msa0875150:CDS |
CTGATCCTAGTTAGTATTCC+AGG | 0.342595 | 6_1:+11329270 | Msa0875150:five_prime_UTR |
ATGTTACAAGCAGCCAAGTA+TGG | 0.351421 | 6_1:+11335683 | Msa0875150:CDS |
AAACTCATATATGAGATAAA+AGG | 0.356394 | 6_1:+11335824 | Msa0875150:CDS |
CAGGTGGCGAAATCTCTTGC+AGG | 0.374108 | 6_1:+11335291 | Msa0875150:intron |
CGAAATCTCTTGCAGGTTGT+TGG | 0.382751 | 6_1:+11335298 | Msa0875150:CDS |
GAGAACATAAACACTAATAT+TGG | 0.386217 | 6_1:-11342024 | None:intergenic |
TAATTTGGCGAAGAGTATAA+TGG | 0.394639 | 6_1:-11329970 | None:intergenic |
CAAGAGATAATTACTTGGAT+TGG | 0.400027 | 6_1:+11329813 | Msa0875150:CDS |
GAAATCTAGTCACTTCTTTG+TGG | 0.406651 | 6_1:-11330462 | None:intergenic |
TCTTTGATCTGCCGACCATT+TGG | 0.415794 | 6_1:+11329229 | Msa0875150:five_prime_UTR |
GCACTTGCTCTCATGCTAAA+GGG | 0.417916 | 6_1:+11341958 | Msa0875150:CDS |
AAGTACATAATGTCATGTTT+TGG | 0.418856 | 6_1:+11335413 | Msa0875150:CDS |
TTTGCTTGATCGTTTCCTCC+TGG | 0.419859 | 6_1:-11341715 | None:intergenic |
AGCAAGTTCTTTCACAATTG+TGG | 0.421401 | 6_1:+11341648 | Msa0875150:CDS |
ACGAAGGAGTTGGTTAAAAT+GGG | 0.422263 | 6_1:+11330256 | Msa0875150:CDS |
AAGAGAAGTCCGACCATTAG+AGG | 0.427062 | 6_1:-11330200 | None:intergenic |
TCGCAAAAGTCATCCTCTAA+TGG | 0.429786 | 6_1:+11330187 | Msa0875150:CDS |
AGGTTGGCGAAATCTCTTGC+AGG | 0.430975 | 6_1:+11335344 | Msa0875150:CDS |
GTTAAGTGGATGCTTGATAA+GGG | 0.433835 | 6_1:+11330358 | Msa0875150:CDS |
GGTTAAGTGGATGCTTGATA+AGG | 0.437785 | 6_1:+11330357 | Msa0875150:CDS |
TGCACTTGCTCTCATGCTAA+AGG | 0.438613 | 6_1:+11341957 | Msa0875150:CDS |
AAATGCAAAGAGAACTTCAA+TGG | 0.443040 | 6_1:+11335960 | Msa0875150:CDS |
TCCATAGCCCATAAAAGGTC+AGG | 0.443669 | 6_1:-11335743 | None:intergenic |
GCAAGTTCTTTCACAATTGT+GGG | 0.445223 | 6_1:+11341649 | Msa0875150:CDS |
TTGCATTTGAAGAGCGGCAT+TGG | 0.450029 | 6_1:-11335945 | None:intergenic |
CACACTCATTGACTCATGTC+TGG | 0.452979 | 6_1:+11329194 | Msa0875150:five_prime_UTR |
TTTATCCTTGTTTCTTCTCA+AGG | 0.454450 | 6_1:-11342101 | None:intergenic |
AATTTAGCAGCAAGAGCAAA+AGG | 0.455248 | 6_1:-11330316 | None:intergenic |
ATTAACTGATGATACAGAAA+TGG | 0.460150 | 6_1:+11330336 | Msa0875150:CDS |
CTCTGGGACAATATTGTTGT+GGG | 0.461847 | 6_1:+11329872 | Msa0875150:CDS |
AAACTCTATAATTCCATACT+TGG | 0.462647 | 6_1:-11335696 | None:intergenic |
CATTATTGACAGAGAAAGAC+TGG | 0.463697 | 6_1:+11330281 | Msa0875150:CDS |
TAAAGTGAACCAACGAGTCT+TGG | 0.467921 | 6_1:-11330491 | None:intergenic |
GTACTTCTTGCCGCAGCAAA+GGG | 0.468424 | 6_1:+11330439 | Msa0875150:CDS |
TTTGCTGCGGCAAGAAGTAC+TGG | 0.470041 | 6_1:-11330436 | None:intergenic |
TGATAGTTGAATAGCATGTA+AGG | 0.473270 | 6_1:-11329942 | None:intergenic |
GCTTCAAATATTGCATCAAC+CGG | 0.488718 | 6_1:+11329770 | Msa0875150:CDS |
ACCTAGTAAGAGAGATTATG+AGG | 0.496333 | 6_1:+11335591 | Msa0875150:CDS |
CCTCAGCATAACGAGAAGTA+AGG | 0.496554 | 6_1:-11341843 | None:intergenic |
CTTCACGTCGCAGTTGATGC+AGG | 0.504019 | 6_1:+11330220 | Msa0875150:CDS |
CTTGTGAAGAATTATCTGAT+TGG | 0.504835 | 6_1:+11329842 | Msa0875150:CDS |
ACCTCATAATCTCTCTTACT+AGG | 0.508802 | 6_1:-11335592 | None:intergenic |
TCAGTACACAGTTTGCCAAA+TGG | 0.513102 | 6_1:-11329244 | None:intergenic |
GTGAGACAGCACAAGAGGCT+TGG | 0.519093 | 6_1:+11329999 | Msa0875150:CDS |
CCTTCCTCCTACCGTGGTCA+TGG | 0.519536 | 6_1:+11335920 | Msa0875150:CDS |
TGTGAATGAAGGTCGACAAT+GGG | 0.519719 | 6_1:+11341615 | Msa0875150:CDS |
TCTTACAAGAGATAATTACT+TGG | 0.523523 | 6_1:+11329808 | Msa0875150:CDS |
TTTCATGTGGCAGTGAAGAA+AGG | 0.529357 | 6_1:+11330115 | Msa0875150:CDS |
CATGAGCAGCTTGTGAATGA+AGG | 0.529449 | 6_1:+11341604 | Msa0875150:CDS |
AGTACTTCTTGCCGCAGCAA+AGG | 0.532571 | 6_1:+11330438 | Msa0875150:CDS |
TCATGCTAAAGGGGTACCGC+TGG | 0.533485 | 6_1:+11341968 | Msa0875150:CDS |
CAGACAAGAAAATTGTGAAA+AGG | 0.535849 | 6_1:-11341906 | None:intergenic |
AAGAACTTCAAGAACTATAC+CGG | 0.539627 | 6_1:-11329789 | None:intergenic |
ATGAAAATAAAAGCTGATGA+TGG | 0.543038 | 6_1:+11330400 | Msa0875150:CDS |
TTCTCTTTGCATTTGAAGAG+CGG | 0.543808 | 6_1:-11335951 | None:intergenic |
AGATAAAATCACGAAGGAGT+TGG | 0.549659 | 6_1:+11330246 | Msa0875150:CDS |
ATAAAAGCTGATGATGGTAA+AGG | 0.550133 | 6_1:+11330406 | Msa0875150:CDS |
ACTCTGGGACAATATTGTTG+TGG | 0.550330 | 6_1:+11329871 | Msa0875150:CDS |
TGATCAGATTCATAACTAAG+AGG | 0.550663 | 6_1:-11330925 | None:intergenic |
GGAGGAAACGATCAAGCAAA+GGG | 0.554355 | 6_1:+11341718 | Msa0875150:CDS |
CCATGACCACGGTAGGAGGA+AGG | 0.558568 | 6_1:-11335920 | None:intergenic |
ACTAACCTGGAATACTAACT+AGG | 0.563239 | 6_1:-11329275 | None:intergenic |
TTAGCATCCTTGCACATAGG+AGG | 0.564073 | 6_1:-11341538 | None:intergenic |
TTCTTTGTGGCCCTTTGCTG+CGG | 0.566741 | 6_1:-11330449 | None:intergenic |
TTGTGAATGAAGGTCGACAA+TGG | 0.567094 | 6_1:+11341614 | Msa0875150:CDS |
GGATCCATGACCACGGTAGG+AGG | 0.572680 | 6_1:-11335924 | None:intergenic |
TCAAACAATGATATTGAGCA+AGG | 0.572974 | 6_1:+11330067 | Msa0875150:CDS |
GTGTGGTGAGTGGTGGTGAG+TGG | 0.574244 | 6_1:-11329174 | None:intergenic |
AAATTGTGAGACAGCACAAG+AGG | 0.575067 | 6_1:+11329994 | Msa0875150:CDS |
CACTTGCTCTCATGCTAAAG+GGG | 0.577835 | 6_1:+11341959 | Msa0875150:CDS |
TAGAGTTTATAAATTCAATG+AGG | 0.586814 | 6_1:+11335711 | Msa0875150:CDS |
AGGCCAAATAATAATTTCGT+CGG | 0.588167 | 6_1:-11341886 | None:intergenic |
ATGATACAGAAATGGTTAAG+TGG | 0.591086 | 6_1:+11330344 | Msa0875150:CDS |
ACTTACCAAATATTTCTGCA+TGG | 0.591862 | 6_1:-11330561 | None:intergenic |
AAGTGGATGCTTGATAAGGG+AGG | 0.595247 | 6_1:+11330361 | Msa0875150:CDS |
AGGAGGAAACGATCAAGCAA+AGG | 0.598759 | 6_1:+11341717 | Msa0875150:CDS |
AAGGGCCTAATTCAGCTGCT+AGG | 0.601949 | 6_1:-11335901 | None:intergenic |
CCTTACTTCTCGTTATGCTG+AGG | 0.605518 | 6_1:+11341843 | Msa0875150:CDS |
CATGACCACGGTAGGAGGAA+GGG | 0.606438 | 6_1:-11335919 | None:intergenic |
AAAAGTCATCCTCTAATGGT+CGG | 0.609201 | 6_1:+11330191 | Msa0875150:CDS |
ATTGGATCCATGACCACGGT+AGG | 0.617993 | 6_1:-11335927 | None:intergenic |
AATGAGTGTGTGGTGAGTGG+TGG | 0.618119 | 6_1:-11329181 | None:intergenic |
TGCTGTAACAAGAGTTACAA+AGG | 0.618166 | 6_1:+11335367 | Msa0875150:CDS |
CGAAGGAGTTGGTTAAAATG+GGG | 0.621899 | 6_1:+11330257 | Msa0875150:CDS |
ATCCTTGTTTCTTCTCAAGG+AGG | 0.624613 | 6_1:-11342098 | None:intergenic |
TACACAGTTTGCCAAATGGT+CGG | 0.627126 | 6_1:-11329240 | None:intergenic |
GTCAATGAGTGTGTGGTGAG+TGG | 0.632103 | 6_1:-11329184 | None:intergenic |
GTCCTCCTTGAGAAGAAACA+AGG | 0.635770 | 6_1:+11342096 | Msa0875150:CDS |
TTGACAGAGAAAGACTGGGA+GGG | 0.651637 | 6_1:+11330286 | Msa0875150:CDS |
CATGCTATTCAACTATCATG+TGG | 0.655863 | 6_1:+11329947 | Msa0875150:CDS |
GAAGGAGTTGGTTAAAATGG+GGG | 0.670276 | 6_1:+11330258 | Msa0875150:CDS |
CATTGTGCCTCCTATGTGCA+AGG | 0.670979 | 6_1:+11341531 | Msa0875150:CDS |
TGATATTGACATGTTTCATG+TGG | 0.682509 | 6_1:+11330102 | Msa0875150:CDS |
GCAGCTTTCACTGTTCCAGG+AGG | 0.688478 | 6_1:+11341700 | Msa0875150:CDS |
TGGCAGTGAAGAAAGGCATG+TGG | 0.690650 | 6_1:+11330122 | Msa0875150:CDS |
GACATGAGTCAATGAGTGTG+TGG | 0.693304 | 6_1:-11329191 | None:intergenic |
ATTATTGACAGAGAAAGACT+GGG | 0.695061 | 6_1:+11330282 | Msa0875150:CDS |
AACAATGATATTGAGCAAGG+AGG | 0.697551 | 6_1:+11330070 | Msa0875150:CDS |
ATTGACAGAGAAAGACTGGG+AGG | 0.702293 | 6_1:+11330285 | Msa0875150:CDS |
TTGCTGCTATTATGATCCAG+CGG | 0.712669 | 6_1:-11341984 | None:intergenic |
CGGCATTGGATCCATGACCA+CGG | 0.722541 | 6_1:-11335931 | None:intergenic |
AGGACAAGATAAAATCACGA+AGG | 0.725327 | 6_1:+11330240 | Msa0875150:CDS |
GCAGCATTAATTCAACACGA+TGG | 0.748368 | 6_1:+11330892 | Msa0875150:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTAATTAATTTAACATTTTC+TGG | - | chr6_1:11331391-11331410 | None:intergenic | 10.0% |
!! | AATTTCATTAAAAAATATGA+AGG | - | chr6_1:11333719-11333738 | None:intergenic | 10.0% |
!! | TAAAAAAATGTTAAAACTAA+CGG | + | chr6_1:11332649-11332668 | Msa0875150:intron | 10.0% |
!! | ATTAGAAATAAAAAGTTAAA+AGG | - | chr6_1:11333257-11333276 | None:intergenic | 10.0% |
!! | AAAAAAAATGTTAAAACTAA+CGG | - | chr6_1:11333387-11333406 | None:intergenic | 10.0% |
!!! | AGAAAATACTAATTATTTTT+TGG | + | chr6_1:11333661-11333680 | Msa0875150:intron | 10.0% |
!! | AATTTCATTAAAAAATATGA+AGG | + | chr6_1:11333719-11333738 | Msa0875150:intron | 10.0% |
!!! | TAAAATATTATTTAGGTTTT+TGG | - | chr6_1:11333804-11333823 | None:intergenic | 10.0% |
!!! | AAACCTAAATAATATTTTAA+AGG | + | chr6_1:11333805-11333824 | Msa0875150:intron | 10.0% |
!!! | AACCTAAATAATATTTTAAA+GGG | + | chr6_1:11333806-11333825 | Msa0875150:intron | 10.0% |
!!! | TAAATTTTATCAATTTAATC+TGG | - | chr6_1:11333985-11334004 | None:intergenic | 10.0% |
!! | TAATCTGTAAAATAAATAAA+AGG | + | chr6_1:11337559-11337578 | Msa0875150:intron | 10.0% |
!! | TATAAATTATTAGAACAAAT+TGG | - | chr6_1:11339030-11339049 | None:intergenic | 10.0% |
!!! | AAAATTATGCATTTTTTTAA+AGG | + | chr6_1:11341043-11341062 | Msa0875150:intron | 10.0% |
!!! | AAATTATGCATTTTTTTAAA+GGG | + | chr6_1:11341044-11341063 | Msa0875150:intron | 10.0% |
!! | AGATTAAAACTAAATAAAAT+TGG | - | chr6_1:11341459-11341478 | None:intergenic | 10.0% |
!! | TATTTACTGTATTTATTAAT+CGG | + | chr6_1:11342177-11342196 | Msa0875150:three_prime_UTR | 10.0% |
!! | AAAAAAAACTTCAAATTACA+GGG | - | chr6_1:11329557-11329576 | None:intergenic | 15.0% |
!! | AAAAAAAAACTTCAAATTAC+AGG | - | chr6_1:11329558-11329577 | None:intergenic | 15.0% |
!!! | TTTGAAGTTTTTTTTTGTTT+TGG | + | chr6_1:11329562-11329581 | Msa0875150:intron | 15.0% |
!!! | CTTTTGTTTAAATAATTTTC+TGG | + | chr6_1:11330611-11330630 | Msa0875150:intron | 15.0% |
!! | CCAATATTAAATGAAAATAA+TGG | - | chr6_1:11330859-11330878 | None:intergenic | 15.0% |
!!! | CCATTATTTTCATTTAATAT+TGG | + | chr6_1:11330856-11330875 | Msa0875150:intron | 15.0% |
!! | GTATATAAATAAAAAATTGG+CGG | + | chr6_1:11331438-11331457 | Msa0875150:intron | 15.0% |
!!! | TAAATACTTTAGTTTATCTT+CGG | + | chr6_1:11331768-11331787 | Msa0875150:intron | 15.0% |
!!! | CATATATGAAATTTTTTGAA+AGG | - | chr6_1:11332434-11332453 | None:intergenic | 15.0% |
!!! | TTAAGCCAATTTTTTAAAAA+TGG | + | chr6_1:11333532-11333551 | Msa0875150:intron | 15.0% |
!!! | TAAGCCAATTTTTTAAAAAT+GGG | + | chr6_1:11333533-11333552 | Msa0875150:intron | 15.0% |
!! | AAAACATAAAAATTCATGTT+TGG | - | chr6_1:11333604-11333623 | None:intergenic | 15.0% |
!! | TAATGAAATTCTTCAAAAAT+TGG | - | chr6_1:11333709-11333728 | None:intergenic | 15.0% |
!! | ATTGAATTAAAATCAAGATT+TGG | - | chr6_1:11334870-11334889 | None:intergenic | 15.0% |
!!! | AATCTTGATTTTAATTCAAT+TGG | + | chr6_1:11334870-11334889 | Msa0875150:intron | 15.0% |
!! | TTAACATTAAGTAAATTCAA+AGG | + | chr6_1:11334931-11334950 | Msa0875150:intron | 15.0% |
!! | ACAATACATTATTATATGTA+GGG | + | chr6_1:11334987-11335006 | Msa0875150:intron | 15.0% |
!!! | TTTTTATTTTTTTTTTGGTC+AGG | - | chr6_1:11335079-11335098 | None:intergenic | 15.0% |
!!! | TTTTTAAATTTTTTTGTACC+TGG | + | chr6_1:11335237-11335256 | Msa0875150:intron | 15.0% |
!! | ATAATAATGTATGCAAAAAA+TGG | - | chr6_1:11335491-11335510 | None:intergenic | 15.0% |
!! | TAAGCATTAGAAATTATATA+AGG | - | chr6_1:11335532-11335551 | None:intergenic | 15.0% |
!! | TTATTCAAATAAGAACTATA+TGG | + | chr6_1:11336017-11336036 | Msa0875150:intron | 15.0% |
!! | AATGAAATTAATATGTCAAA+AGG | - | chr6_1:11336060-11336079 | None:intergenic | 15.0% |
!!! | TATCTTATTATGTGTTTTTT+TGG | + | chr6_1:11336198-11336217 | Msa0875150:intron | 15.0% |
!!! | ATCTTATTATGTGTTTTTTT+GGG | + | chr6_1:11336199-11336218 | Msa0875150:intron | 15.0% |
!! | TGAGTTTCAATAATTAATTA+AGG | + | chr6_1:11336434-11336453 | Msa0875150:intron | 15.0% |
!! | TATTGATGTATATATTCATT+TGG | - | chr6_1:11337415-11337434 | None:intergenic | 15.0% |
!! | TGTAAAATAAATAAAAGGAT+TGG | + | chr6_1:11337564-11337583 | Msa0875150:intron | 15.0% |
!! | GTAAAATAAATAAAAGGATT+GGG | + | chr6_1:11337565-11337584 | Msa0875150:intron | 15.0% |
!! | TAAAATAAATAAAAGGATTG+GGG | + | chr6_1:11337566-11337585 | Msa0875150:intron | 15.0% |
!!! | TATTATTTGAGTTGATTTTA+CGG | + | chr6_1:11337847-11337866 | Msa0875150:intron | 15.0% |
!! | ATTTAAACATGTTTAAATTG+TGG | - | chr6_1:11338055-11338074 | None:intergenic | 15.0% |
!! | ATATAAACACACATATAATT+TGG | - | chr6_1:11338896-11338915 | None:intergenic | 15.0% |
!! | AAAATCAATTATACATGTTT+GGG | - | chr6_1:11339934-11339953 | None:intergenic | 15.0% |
!! | TAAAATCAATTATACATGTT+TGG | - | chr6_1:11339935-11339954 | None:intergenic | 15.0% |
!!! | TCTTTTTAAAATATCTTGTA+AGG | + | chr6_1:11340359-11340378 | Msa0875150:intron | 15.0% |
!!! | TTTATTTTTCTTTTTTGAGT+GGG | - | chr6_1:11340879-11340898 | None:intergenic | 15.0% |
!!! | ATTTATTTTTCTTTTTTGAG+TGG | - | chr6_1:11340880-11340899 | None:intergenic | 15.0% |
!!! | AATTATGCATTTTTTTAAAG+GGG | + | chr6_1:11341045-11341064 | Msa0875150:intron | 15.0% |
!! | GAAGTGAAAATAAATTACAA+TGG | + | chr6_1:11329405-11329424 | Msa0875150:intron | 20.0% |
!!! | ATCTAAACAATTTTTGTACA+GGG | - | chr6_1:11329529-11329548 | None:intergenic | 20.0% |
!!! | AATCTAAACAATTTTTGTAC+AGG | - | chr6_1:11329530-11329549 | None:intergenic | 20.0% |
!! | CAAAGTAAAATGAAGAAATA+AGG | - | chr6_1:11329716-11329735 | None:intergenic | 20.0% |
!!! | TTTGTAAACTCTGATATTTT+GGG | + | chr6_1:11329732-11329751 | Msa0875150:intron | 20.0% |
!! | TGAGAATATATATATGACTT+TGG | - | chr6_1:11330669-11330688 | None:intergenic | 20.0% |
!! | CATATATATATTCTCATGAA+TGG | + | chr6_1:11330673-11330692 | Msa0875150:intron | 20.0% |
!! | AAAATTCATTACTAACCAAT+TGG | + | chr6_1:11330734-11330753 | Msa0875150:intron | 20.0% |
!!! | TGTGAACAATTTTTTTACAA+TGG | + | chr6_1:11331018-11331037 | Msa0875150:intron | 20.0% |
!! | AACATAGTGTTTATATAAGA+GGG | + | chr6_1:11331237-11331256 | Msa0875150:intron | 20.0% |
!!! | GAGAACTATTTTATTCAAAT+TGG | + | chr6_1:11331651-11331670 | Msa0875150:intron | 20.0% |
!!! | AATGTTTAAAGCTAAGTAAA+TGG | + | chr6_1:11332129-11332148 | Msa0875150:intron | 20.0% |
!! | TAAAATATTTCTTAGACTTG+TGG | + | chr6_1:11332407-11332426 | Msa0875150:intron | 20.0% |
!!! | CATAAGTTGATTAAAATGTA+TGG | - | chr6_1:11332465-11332484 | None:intergenic | 20.0% |
!!! | TTTAGGTTTAAATATGTCAT+TGG | + | chr6_1:11332514-11332533 | Msa0875150:intron | 20.0% |
!!! | CAAAATTTTTACAAAGTGTA+GGG | - | chr6_1:11332602-11332621 | None:intergenic | 20.0% |
!! | CTTTGTAAAAAATTTGTCAT+TGG | - | chr6_1:11333432-11333451 | None:intergenic | 20.0% |
!!! | TCTACCCATTTTTAAAAAAT+TGG | - | chr6_1:11333540-11333559 | None:intergenic | 20.0% |
!!! | GTCCCTTTAAAATATTATTT+AGG | - | chr6_1:11333811-11333830 | None:intergenic | 20.0% |
!! | AATACTAATCTTTCTTTCTT+TGG | + | chr6_1:11333914-11333933 | Msa0875150:intron | 20.0% |
!! | TTGATATTAATGATACTCTA+GGG | - | chr6_1:11334042-11334061 | None:intergenic | 20.0% |
!! | ATAAATCACCTCTTATATAT+GGG | - | chr6_1:11334410-11334429 | None:intergenic | 20.0% |
!! | TATAAATCACCTCTTATATA+TGG | - | chr6_1:11334411-11334430 | None:intergenic | 20.0% |
!! | GACAATACATTATTATATGT+AGG | + | chr6_1:11334986-11335005 | Msa0875150:intron | 20.0% |
!! | CAATACATTATTATATGTAG+GGG | + | chr6_1:11334988-11335007 | Msa0875150:intron | 20.0% |
!! | TTGAAATATTTAGGTAATTC+TGG | - | chr6_1:11335162-11335181 | None:intergenic | 20.0% |
!! | AAAAATGGAACAAATTGATT+AGG | - | chr6_1:11335476-11335495 | None:intergenic | 20.0% |
!! | AGAAGATATATGAGATAAAA+AGG | + | chr6_1:11335561-11335580 | Msa0875150:CDS | 20.0% |
!! | TAGAGTTTATAAATTCAATG+AGG | + | chr6_1:11335711-11335730 | Msa0875150:CDS | 20.0% |
!! | AAACTCATATATGAGATAAA+AGG | + | chr6_1:11335824-11335843 | Msa0875150:CDS | 20.0% |
!!! | GTTATTTTCAAATATGTCTA+AGG | - | chr6_1:11335873-11335892 | None:intergenic | 20.0% |
!!! | TCTTATTATGTGTTTTTTTG+GGG | + | chr6_1:11336200-11336219 | Msa0875150:intron | 20.0% |
!!! | TTCTAAAACATCAAAAGAAA+AGG | - | chr6_1:11336291-11336310 | None:intergenic | 20.0% |
!!! | TTCTAAAACATCAAAAGTTT+TGG | - | chr6_1:11336327-11336346 | None:intergenic | 20.0% |
!! | AATAATAAATGCAATTTGTG+TGG | + | chr6_1:11336411-11336430 | Msa0875150:intron | 20.0% |
!!! | ATTTTGAGGAAAAAAAATCA+AGG | + | chr6_1:11336465-11336484 | Msa0875150:intron | 20.0% |
!!! | GTTTTAGTCACTTATATTTT+AGG | - | chr6_1:11337052-11337071 | None:intergenic | 20.0% |
!!! | TTAAGAGTATATAAATTACG+TGG | - | chr6_1:11337210-11337229 | None:intergenic | 20.0% |
!! | ATTTAGACTATACTTCATAA+TGG | + | chr6_1:11337297-11337316 | Msa0875150:intron | 20.0% |
!! | ATTCTAGATAAGTTTAGTAT+GGG | - | chr6_1:11337334-11337353 | None:intergenic | 20.0% |
!! | TATTCTAGATAAGTTTAGTA+TGG | - | chr6_1:11337335-11337354 | None:intergenic | 20.0% |
!!! | TTATTTATAACCTTTAGGAA+TGG | - | chr6_1:11338317-11338336 | None:intergenic | 20.0% |
!! | GGAAATTATTTATAACCTTT+AGG | - | chr6_1:11338322-11338341 | None:intergenic | 20.0% |
!! | AATGTGCAATAATTATGTAA+TGG | + | chr6_1:11338474-11338493 | Msa0875150:intron | 20.0% |
!!! | TTTTATTCAAATATGTAACC+AGG | - | chr6_1:11338611-11338630 | None:intergenic | 20.0% |
!!! | ATTTTTGGATAAATTGAAGT+GGG | - | chr6_1:11340182-11340201 | None:intergenic | 20.0% |
!! | AATTTATCCAAAAATCATGA+AGG | + | chr6_1:11340187-11340206 | Msa0875150:intron | 20.0% |
!! | TATTAGTAAGTGAGAATATT+AGG | - | chr6_1:11340592-11340611 | None:intergenic | 20.0% |
!! | TTAATTAGATGATTAATCAG+AGG | - | chr6_1:11340668-11340687 | None:intergenic | 20.0% |
!!! | TTATTTTTCTTTTTTGAGTG+GGG | - | chr6_1:11340878-11340897 | None:intergenic | 20.0% |
!! | TTAACTTAGAAATAGAAACA+TGG | - | chr6_1:11340941-11340960 | None:intergenic | 20.0% |
!!! | AATTTTCTCAAAAATAAGCA+GGG | - | chr6_1:11341162-11341181 | None:intergenic | 20.0% |
!!! | AAATTTTCTCAAAAATAAGC+AGG | - | chr6_1:11341163-11341182 | None:intergenic | 20.0% |
!!! | GCTTATTTTTGAGAAAATTT+AGG | + | chr6_1:11341163-11341182 | Msa0875150:intron | 20.0% |
!! | TATATTCCAAATTTGTACAA+AGG | - | chr6_1:11341482-11341501 | None:intergenic | 20.0% |
!! | TATAAATTGTTAATCCATAC+AGG | + | chr6_1:11341498-11341517 | Msa0875150:intron | 20.0% |
!!! | TCATCAGTTTTAATGTTTAT+TGG | + | chr6_1:11341817-11341836 | Msa0875150:CDS | 20.0% |
!!! | CATCAGTTTTAATGTTTATT+GGG | + | chr6_1:11341818-11341837 | Msa0875150:CDS | 20.0% |
! | ATAGACTAACTAATCAAAGA+GGG | - | chr6_1:11329315-11329334 | None:intergenic | 25.0% |
! | TGTACAATGAAAATTCATGA+AGG | - | chr6_1:11329589-11329608 | None:intergenic | 25.0% |
! | TACAAAATCGATGATATGAT+AGG | + | chr6_1:11329605-11329624 | Msa0875150:intron | 25.0% |
! | ACAAAATCGATGATATGATA+GGG | + | chr6_1:11329606-11329625 | Msa0875150:intron | 25.0% |
! | CCTGTAATTTAAGAGAATTT+CGG | - | chr6_1:11329638-11329657 | None:intergenic | 25.0% |
! | TAAGTGTGTGAGAAAATTTA+AGG | - | chr6_1:11329672-11329691 | None:intergenic | 25.0% |
!! | CTTTGTAAACTCTGATATTT+TGG | + | chr6_1:11329731-11329750 | Msa0875150:intron | 25.0% |
! | TCTTACAAGAGATAATTACT+TGG | + | chr6_1:11329808-11329827 | Msa0875150:CDS | 25.0% |
!!! | CCATTTTTTGATTTCCAATT+AGG | - | chr6_1:11329917-11329936 | None:intergenic | 25.0% |
! | CCTAATTGGAAATCAAAAAA+TGG | + | chr6_1:11329914-11329933 | Msa0875150:CDS | 25.0% |
!!! | ATTTTGTTTATCAGGAATGA+CGG | + | chr6_1:11330154-11330173 | Msa0875150:CDS | 25.0% |
! | ATTAACTGATGATACAGAAA+TGG | + | chr6_1:11330336-11330355 | Msa0875150:CDS | 25.0% |
! | ATGAAAATAAAAGCTGATGA+TGG | + | chr6_1:11330400-11330419 | Msa0875150:CDS | 25.0% |
! | CTAGACAACGATTATTATTA+TGG | + | chr6_1:11330514-11330533 | Msa0875150:CDS | 25.0% |
!! | TATATATATGACTTTGGTTC+TGG | - | chr6_1:11330663-11330682 | None:intergenic | 25.0% |
! | GATTAATAATGAGTGGTAAT+GGG | - | chr6_1:11330772-11330791 | None:intergenic | 25.0% |
! | TGATTAATAATGAGTGGTAA+TGG | - | chr6_1:11330773-11330792 | None:intergenic | 25.0% |
! | TCTAGTTGATTAATAATGAG+TGG | - | chr6_1:11330779-11330798 | None:intergenic | 25.0% |
! | ATATGAGCTAATCCATATAT+AGG | - | chr6_1:11330961-11330980 | None:intergenic | 25.0% |
! | GAACATAGTGTTTATATAAG+AGG | + | chr6_1:11331236-11331255 | Msa0875150:intron | 25.0% |
!!! | AGTCTTTTTTATGTGTTTCT+AGG | + | chr6_1:11331485-11331504 | Msa0875150:intron | 25.0% |
!! | TTTTCAGCTAATATAGAAAC+AGG | - | chr6_1:11331857-11331876 | None:intergenic | 25.0% |
! | GTTTCTATATTAGCTGAAAA+AGG | + | chr6_1:11331857-11331876 | Msa0875150:intron | 25.0% |
! | TATATTAGCTGAAAAAGGAT+TGG | + | chr6_1:11331862-11331881 | Msa0875150:intron | 25.0% |
! | CCTTAACGAATTTCAATTTA+TGG | - | chr6_1:11332013-11332032 | None:intergenic | 25.0% |
! | CCATAAATTGAAATTCGTTA+AGG | + | chr6_1:11332010-11332029 | Msa0875150:intron | 25.0% |
! | GTTAGGGTTAAATAAGTAAA+TGG | + | chr6_1:11332348-11332367 | Msa0875150:intron | 25.0% |
! | GAAGAACTAAAATTGAATGT+TGG | - | chr6_1:11332387-11332406 | None:intergenic | 25.0% |
!! | GCAAAATTTTTACAAAGTGT+AGG | - | chr6_1:11332603-11332622 | None:intergenic | 25.0% |
!! | CTTTGTAAAAATTTTGCCAT+TGG | + | chr6_1:11332606-11332625 | Msa0875150:intron | 25.0% |
!!! | TTTAACTTGAAGTTAACAGA+AGG | - | chr6_1:11333405-11333424 | None:intergenic | 25.0% |
! | ACTAAAACGAGAATGTAAAA+TGG | + | chr6_1:11333001-11333020 | Msa0875150:intron | 25.0% |
!!! | ACAAATTTTTTACAAAGTGC+AGG | + | chr6_1:11333435-11333454 | Msa0875150:intron | 25.0% |
!!! | CAAATTTTTTACAAAGTGCA+GGG | + | chr6_1:11333436-11333455 | Msa0875150:intron | 25.0% |
!! | AATTGGCTTAAATATGACAT+TGG | - | chr6_1:11333523-11333542 | None:intergenic | 25.0% |
! | CATGAGTTAACTAAAAAGAA+AGG | + | chr6_1:11333747-11333766 | Msa0875150:intron | 25.0% |
! | GAAAGGATTAATTTCAATGA+TGG | + | chr6_1:11333764-11333783 | Msa0875150:intron | 25.0% |
!! | GTAGATGTACACTATTTTAT+TGG | - | chr6_1:11334020-11334039 | None:intergenic | 25.0% |
! | CTTGATATTAATGATACTCT+AGG | - | chr6_1:11334043-11334062 | None:intergenic | 25.0% |
! | CACACACACATATATATATA+TGG | + | chr6_1:11334202-11334221 | Msa0875150:intron | 25.0% |
! | AAATAATGCTAAAATACCCT+TGG | + | chr6_1:11334453-11334472 | Msa0875150:intron | 25.0% |
! | AAAACAACATGTATCTATGA+GGG | + | chr6_1:11334557-11334576 | Msa0875150:intron | 25.0% |
!! | ATTTTCAAACTTCTAGTATG+TGG | - | chr6_1:11334660-11334679 | None:intergenic | 25.0% |
! | AATTAACTAACCAAGCAATT+TGG | + | chr6_1:11334777-11334796 | Msa0875150:intron | 25.0% |
!!! | TTTTTTGTCTATGTGAACAA+TGG | - | chr6_1:11334834-11334853 | None:intergenic | 25.0% |
! | ATGACTTCATGTTATTCAAA+TGG | + | chr6_1:11334905-11334924 | Msa0875150:intron | 25.0% |
!!! | ATTGTTTTAGTAATTTTGCC+AGG | - | chr6_1:11335258-11335277 | None:intergenic | 25.0% |
!! | CTTTTGTTGCTAAAATTTTG+AGG | + | chr6_1:11335324-11335343 | Msa0875150:CDS | 25.0% |
!!! | ACTTTGCAGCTTTTTTTTTA+GGG | - | chr6_1:11335397-11335416 | None:intergenic | 25.0% |
!!! | TACTTTGCAGCTTTTTTTTT+AGG | - | chr6_1:11335398-11335417 | None:intergenic | 25.0% |
!! | AAGTACATAATGTCATGTTT+TGG | + | chr6_1:11335413-11335432 | Msa0875150:CDS | 25.0% |
! | AAACTCTATAATTCCATACT+TGG | - | chr6_1:11335699-11335718 | None:intergenic | 25.0% |
! | AAATCTGTTAGAGATATGAA+AGG | + | chr6_1:11336097-11336116 | Msa0875150:intron | 25.0% |
!!! | AGACTTTTTTTTGTTGTTGA+AGG | + | chr6_1:11336164-11336183 | Msa0875150:intron | 25.0% |
!!! | CTTATTATGTGTTTTTTTGG+GGG | + | chr6_1:11336201-11336220 | Msa0875150:intron | 25.0% |
!!! | TTATTATGTGTTTTTTTGGG+GGG | + | chr6_1:11336202-11336221 | Msa0875150:intron | 25.0% |
! | AAACATCAAAAGAAAAGGAA+TGG | - | chr6_1:11336568-11336587 | None:intergenic | 25.0% |
!!! | TTTTTCAACAAGGGTAAAAT+TGG | - | chr6_1:11336367-11336386 | None:intergenic | 25.0% |
!! | GAAAAACACACTTTGAAAAT+TGG | + | chr6_1:11336381-11336400 | Msa0875150:intron | 25.0% |
!! | TTAAGGAGATTAGAATTTTG+AGG | + | chr6_1:11336451-11336470 | Msa0875150:intron | 25.0% |
! | AAAAAATCAAGGAGTAAGTA+AGG | + | chr6_1:11336476-11336495 | Msa0875150:intron | 25.0% |
! | AAAAATCAAGGAGTAAGTAA+GGG | + | chr6_1:11336477-11336496 | Msa0875150:intron | 25.0% |
! | ACCTAAAACATCAAAAGAAA+AGG | + | chr6_1:11336563-11336582 | Msa0875150:intron | 25.0% |
!! | TCCTTTTCTTTTGATGTTTT+AGG | - | chr6_1:11336287-11336306 | None:intergenic | 25.0% |
! | AAACATCAAAAGAAAAGGAA+TGG | + | chr6_1:11336568-11336587 | Msa0875150:intron | 25.0% |
! | TATGTGCAATTGTTAAACAA+AGG | - | chr6_1:11336674-11336693 | None:intergenic | 25.0% |
!!! | TATTTTAGGATGAAGTTTTC+AGG | - | chr6_1:11337038-11337057 | None:intergenic | 25.0% |
! | AATGTGAAATAAGAAAGTTC+AGG | - | chr6_1:11337175-11337194 | None:intergenic | 25.0% |
!! | TATAGTTGGTTTAAGTCATT+AGG | - | chr6_1:11337270-11337289 | None:intergenic | 25.0% |
!! | CAAATGAAGATATATGCTTT+TGG | - | chr6_1:11337469-11337488 | None:intergenic | 25.0% |
!! | CAAAAGCATATATCTTCATT+TGG | + | chr6_1:11337467-11337486 | Msa0875150:intron | 25.0% |
! | TGAATAGGTTAGTATGATTA+TGG | - | chr6_1:11338268-11338287 | None:intergenic | 25.0% |
! | ATAATCATACTAACCTATTC+AGG | + | chr6_1:11338267-11338286 | Msa0875150:intron | 25.0% |
! | ATGTAGTTTATCAGGATATT+GGG | - | chr6_1:11338343-11338362 | None:intergenic | 25.0% |
! | AATGTAGTTTATCAGGATAT+TGG | - | chr6_1:11338344-11338363 | None:intergenic | 25.0% |
! | GAAGTAAAGAATCTTAGTTA+TGG | - | chr6_1:11338387-11338406 | None:intergenic | 25.0% |
! | ATGTCATGTAAACAATTCAT+GGG | - | chr6_1:11338427-11338446 | None:intergenic | 25.0% |
! | TATGTCATGTAAACAATTCA+TGG | - | chr6_1:11338428-11338447 | None:intergenic | 25.0% |
! | CATAAAAAATAGCCATTGTT+CGG | - | chr6_1:11338653-11338672 | None:intergenic | 25.0% |
! | TGGATTAAATTTGTAAGACA+AGG | - | chr6_1:11338787-11338806 | None:intergenic | 25.0% |
!!! | AATTGATTTGTCACTTGTTT+TGG | - | chr6_1:11338871-11338890 | None:intergenic | 25.0% |
!!! | AGAAATTTTAGAGCAAACAA+TGG | + | chr6_1:11338980-11338999 | Msa0875150:intron | 25.0% |
!!! | GAAATTTTAGAGCAAACAAT+GGG | + | chr6_1:11338981-11339000 | Msa0875150:intron | 25.0% |
! | GACACAAATTTCGTATAATT+TGG | - | chr6_1:11339496-11339515 | None:intergenic | 25.0% |
! | AAATTTGTGTCTAAACTGTA+GGG | + | chr6_1:11339505-11339524 | Msa0875150:intron | 25.0% |
!! | TTGAGTGGTTGTTAAAATTT+TGG | - | chr6_1:11339546-11339565 | None:intergenic | 25.0% |
! | CATAATCAGTGTTAATATCA+TGG | + | chr6_1:11339824-11339843 | Msa0875150:intron | 25.0% |
! | AACAAAAGTTGTAAGAAGAA+TGG | - | chr6_1:11339989-11340008 | None:intergenic | 25.0% |
! | AAACACATACTTAGATGATT+TGG | + | chr6_1:11340012-11340031 | Msa0875150:intron | 25.0% |
!!! | GATTTTTGGATAAATTGAAG+TGG | - | chr6_1:11340183-11340202 | None:intergenic | 25.0% |
! | TTGGAGTTTATTGAATTTGA+TGG | + | chr6_1:11340232-11340251 | Msa0875150:intron | 25.0% |
! | ATCTTCAATCTTACCAAAAA+AGG | - | chr6_1:11340478-11340497 | None:intergenic | 25.0% |
!!! | TATTTTTCTTTTTTGAGTGG+GGG | - | chr6_1:11340877-11340896 | None:intergenic | 25.0% |
! | TTGACTCTCATAGTAAAAAT+AGG | - | chr6_1:11341071-11341090 | None:intergenic | 25.0% |
! | TAATCTCCTTTGTACAAATT+TGG | + | chr6_1:11341473-11341492 | Msa0875150:intron | 25.0% |
!!! | TTTTTGGTAAATAATTCACG+AGG | - | chr6_1:11341583-11341602 | None:intergenic | 25.0% |
! | GAGAACATAAACACTAATAT+TGG | - | chr6_1:11342027-11342046 | None:intergenic | 25.0% |
TAGACTAACTAATCAAAGAG+GGG | - | chr6_1:11329314-11329333 | None:intergenic | 30.0% | |
CATAGACTAACTAATCAAAG+AGG | - | chr6_1:11329316-11329335 | None:intergenic | 30.0% | |
GAAATCGCTAATATTACTGA+AGG | - | chr6_1:11329498-11329517 | None:intergenic | 30.0% | |
CAAAATCGATGATATGATAG+GGG | + | chr6_1:11329607-11329626 | Msa0875150:intron | 30.0% | |
CCGAAATTCTCTTAAATTAC+AGG | + | chr6_1:11329635-11329654 | Msa0875150:intron | 30.0% | |
AGGAGTAACATCATAAAGAT+AGG | - | chr6_1:11329696-11329715 | None:intergenic | 30.0% | |
!! | ATATTTTGGGCAGATCTTAA+TGG | + | chr6_1:11329745-11329764 | Msa0875150:intron | 30.0% |
AAGAACTTCAAGAACTATAC+CGG | - | chr6_1:11329792-11329811 | None:intergenic | 30.0% | |
CAAGAGATAATTACTTGGAT+TGG | + | chr6_1:11329813-11329832 | Msa0875150:CDS | 30.0% | |
CTTGTGAAGAATTATCTGAT+TGG | + | chr6_1:11329842-11329861 | Msa0875150:CDS | 30.0% | |
TGATAGTTGAATAGCATGTA+AGG | - | chr6_1:11329945-11329964 | None:intergenic | 30.0% | |
! | TAATTTGGCGAAGAGTATAA+TGG | - | chr6_1:11329973-11329992 | None:intergenic | 30.0% |
CTGTCTCACAATTTCTAATT+TGG | - | chr6_1:11329988-11330007 | None:intergenic | 30.0% | |
TCAAACAATGATATTGAGCA+AGG | + | chr6_1:11330067-11330086 | Msa0875150:CDS | 30.0% | |
TGATATTGACATGTTTCATG+TGG | + | chr6_1:11330102-11330121 | Msa0875150:CDS | 30.0% | |
ATTATTGACAGAGAAAGACT+GGG | + | chr6_1:11330282-11330301 | Msa0875150:CDS | 30.0% | |
ATGATACAGAAATGGTTAAG+TGG | + | chr6_1:11330344-11330363 | Msa0875150:CDS | 30.0% | |
!! | ATAAAAGCTGATGATGGTAA+AGG | + | chr6_1:11330406-11330425 | Msa0875150:CDS | 30.0% |
! | ACTTACCAAATATTTCTGCA+TGG | - | chr6_1:11330564-11330583 | None:intergenic | 30.0% |
TGATCAGATTCATAACTAAG+AGG | - | chr6_1:11330928-11330947 | None:intergenic | 30.0% | |
TTGTTCACACCAATTAAGTT+TGG | - | chr6_1:11331007-11331026 | None:intergenic | 30.0% | |
TTCCACTAAATGGATCAAAT+TGG | + | chr6_1:11331128-11331147 | Msa0875150:intron | 30.0% | |
ATCCAATTTGATCCATTTAG+TGG | - | chr6_1:11331133-11331152 | None:intergenic | 30.0% | |
! | AGCTAAGGAAAGATTTTAGA+CGG | + | chr6_1:11331587-11331606 | Msa0875150:intron | 30.0% |
TCGGTTTCAATCTAAGTTAA+TGG | + | chr6_1:11331787-11331806 | Msa0875150:intron | 30.0% | |
TATAGAAACAGGAAAGGTAA+CGG | - | chr6_1:11331846-11331865 | None:intergenic | 30.0% | |
AGCTAATATAGAAACAGGAA+AGG | - | chr6_1:11331852-11331871 | None:intergenic | 30.0% | |
!! | TAAAATTCCGAGCTCTAAAT+CGG | + | chr6_1:11331918-11331937 | Msa0875150:intron | 30.0% |
!!! | ATGTTTTAGTTGCAGTATTG+TGG | + | chr6_1:11332236-11332255 | Msa0875150:intron | 30.0% |
! | TGGTAATTCTTTTGCTTTCA+AGG | - | chr6_1:11332279-11332298 | None:intergenic | 30.0% |
! | TCATGTACATATACTTTTCC+AGG | + | chr6_1:11332319-11332338 | Msa0875150:intron | 30.0% |
! | ACTTTTCCAGGTATTTTGTT+AGG | + | chr6_1:11332331-11332350 | Msa0875150:intron | 30.0% |
! | CTTTTCCAGGTATTTTGTTA+GGG | + | chr6_1:11332332-11332351 | Msa0875150:intron | 30.0% |
TTTAACCCTAACAAAATACC+TGG | - | chr6_1:11332340-11332359 | None:intergenic | 30.0% | |
GAAAAAATAGTGAAACTGCA+AGG | - | chr6_1:11332541-11332560 | None:intergenic | 30.0% | |
!!! | GTTTCACTATTTTTTCGCTT+TGG | + | chr6_1:11332545-11332564 | Msa0875150:intron | 30.0% |
CCAAACAAAAAAAAACTGCA+GGG | - | chr6_1:11332572-11332591 | None:intergenic | 30.0% | |
!!! | GTTTTGAGAAAGTGGAAAAA+TGG | + | chr6_1:11332852-11332871 | Msa0875150:intron | 30.0% |
GTCGAAATCTAATTGATGTA+TGG | + | chr6_1:11333045-11333064 | Msa0875150:intron | 30.0% | |
GAAATCTAATTGATGTATGG+AGG | + | chr6_1:11333048-11333067 | Msa0875150:intron | 30.0% | |
GAAATCGAAATTGAAACGTA+AGG | + | chr6_1:11333073-11333092 | Msa0875150:intron | 30.0% | |
! | AAAATTTTGTCTATACCACG+TGG | + | chr6_1:11333334-11333353 | Msa0875150:intron | 30.0% |
GTATCATTAATATCAAGACG+TGG | + | chr6_1:11334046-11334065 | Msa0875150:intron | 30.0% | |
CTATAAATCACCCTTTATGA+AGG | + | chr6_1:11334230-11334249 | Msa0875150:intron | 30.0% | |
CTAAAAGACTCCTTCATAAA+GGG | - | chr6_1:11334243-11334262 | None:intergenic | 30.0% | |
! | GTCTTTTAGCAAATGCTTAT+AGG | - | chr6_1:11334274-11334293 | None:intergenic | 30.0% |
TAGCAAAACCCATATATAAG+AGG | + | chr6_1:11334399-11334418 | Msa0875150:intron | 30.0% | |
!! | GTTTTGTTGCTTATTGATGT+AGG | - | chr6_1:11334542-11334561 | None:intergenic | 30.0% |
CAAAACAACATGTATCTATG+AGG | + | chr6_1:11334556-11334575 | Msa0875150:intron | 30.0% | |
! | CGAAGGCATGATAATTAATT+AGG | + | chr6_1:11334629-11334648 | Msa0875150:intron | 30.0% |
ACCTTATAAGGTGAATAAGT+GGG | - | chr6_1:11335036-11335055 | None:intergenic | 30.0% | |
TGACTAGAATTCACCTTATA+AGG | - | chr6_1:11335048-11335067 | None:intergenic | 30.0% | |
!! | ATTTAGGTAATTCTGGAACA+AGG | - | chr6_1:11335155-11335174 | None:intergenic | 30.0% |
!!! | TGTTGCTAAAATTTTGAGGT+TGG | + | chr6_1:11335328-11335347 | Msa0875150:CDS | 30.0% |
TATGAGATAAAAGGCCAAAA+AGG | + | chr6_1:11335833-11335852 | Msa0875150:CDS | 30.0% | |
ATGAGATAAAAGGCCAAAAA+GGG | + | chr6_1:11335834-11335853 | Msa0875150:CDS | 30.0% | |
AAATGCAAAGAGAACTTCAA+TGG | + | chr6_1:11335960-11335979 | Msa0875150:CDS | 30.0% | |
AAGAGAACTTCAATGGTTTA+AGG | + | chr6_1:11335967-11335986 | Msa0875150:CDS | 30.0% | |
ATTTCATTTCACTCGTTTGA+TGG | + | chr6_1:11336072-11336091 | Msa0875150:intron | 30.0% | |
GATATGAAAGGATATAGAGT+TGG | + | chr6_1:11336109-11336128 | Msa0875150:intron | 30.0% | |
!!! | TTTTGTTGTTGAAGGAAGAT+AGG | + | chr6_1:11336172-11336191 | Msa0875150:intron | 30.0% |
!! | CAAAGTGTGTTTTTCAACAA+GGG | - | chr6_1:11336376-11336395 | None:intergenic | 30.0% |
!! | TCAAAGTGTGTTTTTCAACA+AGG | - | chr6_1:11336377-11336396 | None:intergenic | 30.0% |
ATCAAAAGAAAAGGAATGGA+GGG | + | chr6_1:11336572-11336591 | Msa0875150:intron | 30.0% | |
CAATGGAAAATCCTCTTAAA+AGG | + | chr6_1:11337140-11337159 | Msa0875150:intron | 30.0% | |
TCTAAATGACACTGTATAGT+TGG | - | chr6_1:11337284-11337303 | None:intergenic | 30.0% | |
ATGTGCGTTAAATTTAGTAC+TGG | + | chr6_1:11337361-11337380 | Msa0875150:intron | 30.0% | |
GATATTGCATAAACCCAAAA+GGG | - | chr6_1:11337680-11337699 | None:intergenic | 30.0% | |
AGATATTGCATAAACCCAAA+AGG | - | chr6_1:11337681-11337700 | None:intergenic | 30.0% | |
TTAGTCGAATGTAGTTTATC+AGG | - | chr6_1:11338351-11338370 | None:intergenic | 30.0% | |
GAATCTTAGTTATGGAAGTT+CGG | - | chr6_1:11338379-11338398 | None:intergenic | 30.0% | |
!!! | TGTTTTAAGATACTCCAACA+CGG | - | chr6_1:11338586-11338605 | None:intergenic | 30.0% |
!!! | GTAACCATTTTTAGTAACCA+AGG | + | chr6_1:11338707-11338726 | Msa0875150:intron | 30.0% |
!! | GTTTATGTTAGTGTTGATGT+TGG | - | chr6_1:11338807-11338826 | None:intergenic | 30.0% |
!! | ATCACACATTAGCTTTCTAA+TGG | + | chr6_1:11339050-11339069 | Msa0875150:intron | 30.0% |
TGTTATGAAGTTGCTAAAAG+TGG | - | chr6_1:11339127-11339146 | None:intergenic | 30.0% | |
!!! | ATTGTGAGTTGTTTTGATGT+TGG | - | chr6_1:11339216-11339235 | None:intergenic | 30.0% |
TCAAAACAACTCACAATACA+TGG | + | chr6_1:11339219-11339238 | Msa0875150:intron | 30.0% | |
! | AAAAGTTCTTACCGTTTTAG+TGG | + | chr6_1:11339391-11339410 | Msa0875150:intron | 30.0% |
! | TAAAGTTTGGTATTTTCTGC+TGG | - | chr6_1:11339446-11339465 | None:intergenic | 30.0% |
! | CGGAAAACATGTTTAAAGTT+TGG | - | chr6_1:11339459-11339478 | None:intergenic | 30.0% |
! | ATTTGGATTTGAAACGAGTT+CGG | - | chr6_1:11339479-11339498 | None:intergenic | 30.0% |
GAAATTTGTGTCTAAACTGT+AGG | + | chr6_1:11339504-11339523 | Msa0875150:intron | 30.0% | |
! | TTTTAAGCTCAAACTGATGT+TGG | - | chr6_1:11339598-11339617 | None:intergenic | 30.0% |
!! | GATGATCATAAGCTGATTTT+TGG | - | chr6_1:11339621-11339640 | None:intergenic | 30.0% |
TCTTAAGGATTGATGAATTC+AGG | - | chr6_1:11339669-11339688 | None:intergenic | 30.0% | |
CTATACTTGGTAGAATCTTA+AGG | - | chr6_1:11339684-11339703 | None:intergenic | 30.0% | |
CTGTACTAAAGTGATTGTTT+GGG | - | chr6_1:11339754-11339773 | None:intergenic | 30.0% | |
TCTGTACTAAAGTGATTGTT+TGG | - | chr6_1:11339755-11339774 | None:intergenic | 30.0% | |
TCAAGGATAAAGAAGGATTA+AGG | - | chr6_1:11339782-11339801 | None:intergenic | 30.0% | |
TAAAGGATCAAGGATAAAGA+AGG | - | chr6_1:11339789-11339808 | None:intergenic | 30.0% | |
!! | AAGGTTTGAATTTTAGCACA+AGG | - | chr6_1:11339862-11339881 | None:intergenic | 30.0% |
ATCCAAAAATCATGAAGGAA+TGG | + | chr6_1:11340192-11340211 | Msa0875150:intron | 30.0% | |
! | AACCATTCCTTCATGATTTT+TGG | - | chr6_1:11340197-11340216 | None:intergenic | 30.0% |
GGTTACATGTTTCAAAGTAT+TGG | + | chr6_1:11340213-11340232 | Msa0875150:intron | 30.0% | |
TATTGAATTTGATGGAGATG+TGG | + | chr6_1:11340240-11340259 | Msa0875150:intron | 30.0% | |
ATTGAATTTGATGGAGATGT+GGG | + | chr6_1:11340241-11340260 | Msa0875150:intron | 30.0% | |
! | TTCTAGAGAGATAAGGAAAT+GGG | + | chr6_1:11340316-11340335 | Msa0875150:intron | 30.0% |
ATAAGGAAATGGGAAAAATG+AGG | + | chr6_1:11340326-11340345 | Msa0875150:intron | 30.0% | |
GGGAAAAATGAGGAAAAAAA+TGG | + | chr6_1:11340336-11340355 | Msa0875150:intron | 30.0% | |
TATCCTTGAGACTTAAGTAA+GGG | - | chr6_1:11340401-11340420 | None:intergenic | 30.0% | |
TTATCCTTGAGACTTAAGTA+AGG | - | chr6_1:11340402-11340421 | None:intergenic | 30.0% | |
!! | AATTGACAGTGTTTTTAAGC+AGG | + | chr6_1:11340440-11340459 | Msa0875150:intron | 30.0% |
!! | ATTGACAGTGTTTTTAAGCA+GGG | + | chr6_1:11340441-11340460 | Msa0875150:intron | 30.0% |
!!! | GGTATTACAGTAACCTTTTT+TGG | + | chr6_1:11340462-11340481 | Msa0875150:intron | 30.0% |
TATTAGGATTCATCCTTGTA+AGG | - | chr6_1:11340576-11340595 | None:intergenic | 30.0% | |
CATATGTGAAGTGAAAACAT+AGG | + | chr6_1:11340688-11340707 | Msa0875150:intron | 30.0% | |
GGTATAAATATGCATCTGTA+TGG | - | chr6_1:11340743-11340762 | None:intergenic | 30.0% | |
CAGATGCATATTTATACCAA+TGG | + | chr6_1:11340745-11340764 | Msa0875150:intron | 30.0% | |
GTGACATATCAACTTTAACA+TGG | + | chr6_1:11341185-11341204 | Msa0875150:intron | 30.0% | |
AAATTGTTAATCCATACAGG+CGG | + | chr6_1:11341501-11341520 | Msa0875150:intron | 30.0% | |
GCATCATTACCTAAAAAGAT+AGG | - | chr6_1:11341748-11341767 | None:intergenic | 30.0% | |
TTGCCGACGAAATTATTATT+TGG | + | chr6_1:11341883-11341902 | Msa0875150:CDS | 30.0% | |
AGGCCAAATAATAATTTCGT+CGG | - | chr6_1:11341889-11341908 | None:intergenic | 30.0% | |
CAGACAAGAAAATTGTGAAA+AGG | - | chr6_1:11341909-11341928 | None:intergenic | 30.0% | |
! | TTTCACAATTTTCTTGTCTG+TGG | + | chr6_1:11341909-11341928 | Msa0875150:CDS | 30.0% |
! | TTTATCCTTGTTTCTTCTCA+AGG | - | chr6_1:11342104-11342123 | None:intergenic | 30.0% |
ACTAACCTGGAATACTAACT+AGG | - | chr6_1:11329278-11329297 | None:intergenic | 35.0% | |
!!! | ATCCTCTGGTTTTCTGAATT+GGG | + | chr6_1:11329458-11329477 | Msa0875150:intron | 35.0% |
GCTTCAAATATTGCATCAAC+CGG | + | chr6_1:11329770-11329789 | Msa0875150:CDS | 35.0% | |
ATCTGATTGGCAAAAAACTC+TGG | + | chr6_1:11329855-11329874 | Msa0875150:CDS | 35.0% | |
TCTGATTGGCAAAAAACTCT+GGG | + | chr6_1:11329856-11329875 | Msa0875150:CDS | 35.0% | |
GATTTCCAATTAGGCTTTCT+AGG | - | chr6_1:11329908-11329927 | None:intergenic | 35.0% | |
CATGCTATTCAACTATCATG+TGG | + | chr6_1:11329947-11329966 | Msa0875150:CDS | 35.0% | |
AACAATGATATTGAGCAAGG+AGG | + | chr6_1:11330070-11330089 | Msa0875150:CDS | 35.0% | |
!! | ATGACGCGATTTTGTTTATC+AGG | + | chr6_1:11330146-11330165 | Msa0875150:CDS | 35.0% |
AAAAGTCATCCTCTAATGGT+CGG | + | chr6_1:11330191-11330210 | Msa0875150:CDS | 35.0% | |
AGGACAAGATAAAATCACGA+AGG | + | chr6_1:11330240-11330259 | Msa0875150:CDS | 35.0% | |
AGATAAAATCACGAAGGAGT+TGG | + | chr6_1:11330246-11330265 | Msa0875150:CDS | 35.0% | |
! | ACGAAGGAGTTGGTTAAAAT+GGG | + | chr6_1:11330256-11330275 | Msa0875150:CDS | 35.0% |
CATTATTGACAGAGAAAGAC+TGG | + | chr6_1:11330281-11330300 | Msa0875150:CDS | 35.0% | |
AATTTAGCAGCAAGAGCAAA+AGG | - | chr6_1:11330319-11330338 | None:intergenic | 35.0% | |
GTTAAGTGGATGCTTGATAA+GGG | + | chr6_1:11330358-11330377 | Msa0875150:CDS | 35.0% | |
GAAATCTAGTCACTTCTTTG+TGG | - | chr6_1:11330465-11330484 | None:intergenic | 35.0% | |
!!! | TTCTTTTTTCCAAGACTCGT+TGG | + | chr6_1:11330482-11330501 | Msa0875150:CDS | 35.0% |
TGCATCCATGCAGAAATATT+TGG | + | chr6_1:11330556-11330575 | Msa0875150:CDS | 35.0% | |
ATGAATCTGATCAATGTACG+CGG | + | chr6_1:11330935-11330954 | Msa0875150:intron | 35.0% | |
TTCCACTGTGAAATACAGTA+GGG | - | chr6_1:11330984-11331003 | None:intergenic | 35.0% | |
ACAGTGGAACCAAACTTAAT+TGG | + | chr6_1:11330995-11331014 | Msa0875150:intron | 35.0% | |
!! | TCGAGCTTTATTCCACTAAA+TGG | + | chr6_1:11331118-11331137 | Msa0875150:intron | 35.0% |
TCGTAAGCTACTGATATTGT+TGG | + | chr6_1:11331175-11331194 | Msa0875150:intron | 35.0% | |
GGAACACTAGAGTGAATAAT+TGG | + | chr6_1:11331196-11331215 | Msa0875150:intron | 35.0% | |
AAAAAGACTAAAAAGCCCAG+CGG | - | chr6_1:11331474-11331493 | None:intergenic | 35.0% | |
! | GCTAAGGAAAGATTTTAGAC+GGG | + | chr6_1:11331588-11331607 | Msa0875150:intron | 35.0% |
AAGCATATGATTCAGTGTAG+TGG | + | chr6_1:11331683-11331702 | Msa0875150:intron | 35.0% | |
ACATGATATTACGCTTCATG+TGG | + | chr6_1:11331714-11331733 | Msa0875150:intron | 35.0% | |
CATGATATTACGCTTCATGT+GGG | + | chr6_1:11331715-11331734 | Msa0875150:intron | 35.0% | |
ATGATATTACGCTTCATGTG+GGG | + | chr6_1:11331716-11331735 | Msa0875150:intron | 35.0% | |
AATGGATACCCTAGAAAAAG+AGG | + | chr6_1:11331805-11331824 | Msa0875150:intron | 35.0% | |
ATGGATACCCTAGAAAAAGA+GGG | + | chr6_1:11331806-11331825 | Msa0875150:intron | 35.0% | |
! | GTCTAAACCCTCTTTTTCTA+GGG | - | chr6_1:11331816-11331835 | None:intergenic | 35.0% |
! | TGTCTAAACCCTCTTTTTCT+AGG | - | chr6_1:11331817-11331836 | None:intergenic | 35.0% |
AGAAAAAGAGGGTTTAGACA+AGG | + | chr6_1:11331817-11331836 | Msa0875150:intron | 35.0% | |
ATTAGCTGAAAAAGGATTGG+AGG | + | chr6_1:11331865-11331884 | Msa0875150:intron | 35.0% | |
! | TATACATCCGATTTAGAGCT+CGG | - | chr6_1:11331928-11331947 | None:intergenic | 35.0% |
TTGCTTTCAAGGTCTATGTA+GGG | - | chr6_1:11332268-11332287 | None:intergenic | 35.0% | |
TTTGCTTTCAAGGTCTATGT+AGG | - | chr6_1:11332269-11332288 | None:intergenic | 35.0% | |
!!! | CCCTGCAGTTTTTTTTTGTT+TGG | + | chr6_1:11332569-11332588 | Msa0875150:intron | 35.0% |
GCCAAACAAAAAAAAACTGC+AGG | - | chr6_1:11332573-11332592 | None:intergenic | 35.0% | |
! | TTGTCTTTTATTGTTCCACG+TGG | - | chr6_1:11332702-11332721 | None:intergenic | 35.0% |
!!! | ACGCAAAAGTTTTGAGAAAG+TGG | + | chr6_1:11332844-11332863 | Msa0875150:intron | 35.0% |
! | GTCTTCATTTTGTATGAAGC+AGG | + | chr6_1:11333126-11333145 | Msa0875150:intron | 35.0% |
AGCCAAACAAAAATAACTGC+AGG | + | chr6_1:11333464-11333483 | Msa0875150:intron | 35.0% | |
GCCAAACAAAAATAACTGCA+GGG | + | chr6_1:11333465-11333484 | Msa0875150:intron | 35.0% | |
!!! | TCCCTGCAGTTATTTTTGTT+TGG | - | chr6_1:11333469-11333488 | None:intergenic | 35.0% |
!!! | CTTGCAGTTTCACCATTTTT+TGG | - | chr6_1:11333498-11333517 | None:intergenic | 35.0% |
CAAAAAATGGTGAAACTGCA+AGG | + | chr6_1:11333496-11333515 | Msa0875150:intron | 35.0% | |
GCTAAAAGACTCCTTCATAA+AGG | - | chr6_1:11334244-11334263 | None:intergenic | 35.0% | |
!! | AAGTTGATAATCACACCTTG+AGG | + | chr6_1:11334340-11334359 | Msa0875150:intron | 35.0% |
! | TTTTAGCAATTCACACCTCA+AGG | - | chr6_1:11334358-11334377 | None:intergenic | 35.0% |
ATGCTAAAATACCCTTGGTA+AGG | + | chr6_1:11334458-11334477 | Msa0875150:intron | 35.0% | |
TGCTAAAATACCCTTGGTAA+GGG | + | chr6_1:11334459-11334478 | Msa0875150:intron | 35.0% | |
! | TAAGGGCAAAAGTAAGTTGA+AGG | + | chr6_1:11334476-11334495 | Msa0875150:intron | 35.0% |
!! | GAAAGTTCACTTTTACTCGA+AGG | + | chr6_1:11334612-11334631 | Msa0875150:intron | 35.0% |
! | ACCAAGCAATTTGGTTCAAT+TGG | + | chr6_1:11334786-11334805 | Msa0875150:intron | 35.0% |
ACCAATTGAACCAAATTGCT+TGG | - | chr6_1:11334790-11334809 | None:intergenic | 35.0% | |
ACATTATTATATGTAGGGGC+CGG | + | chr6_1:11334992-11335011 | Msa0875150:intron | 35.0% | |
CCTTATAAGGTGAATAAGTG+GGG | - | chr6_1:11335035-11335054 | None:intergenic | 35.0% | |
CACCTTATAAGGTGAATAAG+TGG | - | chr6_1:11335037-11335056 | None:intergenic | 35.0% | |
TAAGGTGAATTCTAGTCACT+AGG | + | chr6_1:11335050-11335069 | Msa0875150:intron | 35.0% | |
AACAATAGTACTTACCTTGC+AGG | + | chr6_1:11335272-11335291 | Msa0875150:intron | 35.0% | |
TGCTGTAACAAGAGTTACAA+AGG | + | chr6_1:11335367-11335386 | Msa0875150:CDS | 35.0% | |
GCAGGGAAATTTCAACTTAT+TGG | + | chr6_1:11335443-11335462 | Msa0875150:CDS | 35.0% | |
ACCTAGTAAGAGAGATTATG+AGG | + | chr6_1:11335591-11335610 | Msa0875150:CDS | 35.0% | |
ACCTCATAATCTCTCTTACT+AGG | - | chr6_1:11335595-11335614 | None:intergenic | 35.0% | |
! | AAGCAAATCCTGACCTTTTA+TGG | + | chr6_1:11335735-11335754 | Msa0875150:CDS | 35.0% |
! | AGCAAATCCTGACCTTTTAT+GGG | + | chr6_1:11335736-11335755 | Msa0875150:CDS | 35.0% |
! | TTTTGTCCATAGCCCATAAA+AGG | - | chr6_1:11335751-11335770 | None:intergenic | 35.0% |
GCTATGGACAAAAACAAAAG+AGG | + | chr6_1:11335758-11335777 | Msa0875150:CDS | 35.0% | |
!! | ACGACGTTTTAAACCCTTTT+TGG | - | chr6_1:11335850-11335869 | None:intergenic | 35.0% |
TTCTCTTTGCATTTGAAGAG+CGG | - | chr6_1:11335954-11335973 | None:intergenic | 35.0% | |
CATCAAAAGAAAAGGAATGG+AGG | - | chr6_1:11336571-11336590 | None:intergenic | 35.0% | |
CATCAAAAGAAAAGGAATGG+AGG | + | chr6_1:11336571-11336590 | Msa0875150:intron | 35.0% | |
!! | ATTTTAACCCTATCACGTCA+TGG | + | chr6_1:11336600-11336619 | Msa0875150:intron | 35.0% |
TGTTTGCTTAGTAGTGTCAA+TGG | - | chr6_1:11336804-11336823 | None:intergenic | 35.0% | |
TATAGCTCATGATCGATCAA+CGG | - | chr6_1:11336981-11337000 | None:intergenic | 35.0% | |
CAATTCACATTGAAGAACTG+AGG | - | chr6_1:11337010-11337029 | None:intergenic | 35.0% | |
TTAAACGTTTCCAACCATGT+CGG | + | chr6_1:11337108-11337127 | Msa0875150:intron | 35.0% | |
! | GGTGATGATTACCTTTTAAG+AGG | - | chr6_1:11337154-11337173 | None:intergenic | 35.0% |
! | TCTCTAAACTCAACCCTTTT+GGG | + | chr6_1:11337664-11337683 | Msa0875150:intron | 35.0% |
AAGCCTAACTAAGCAATCAT+GGG | + | chr6_1:11337703-11337722 | Msa0875150:intron | 35.0% | |
TATCCCATGATTGCTTAGTT+AGG | - | chr6_1:11337709-11337728 | None:intergenic | 35.0% | |
TAAGCAATCATGGGATAACT+AGG | + | chr6_1:11337712-11337731 | Msa0875150:intron | 35.0% | |
! | TGATTTTACGGAATAAACCC+AGG | + | chr6_1:11337859-11337878 | Msa0875150:intron | 35.0% |
GTTAGTATGATTATGGACAC+AGG | - | chr6_1:11338261-11338280 | None:intergenic | 35.0% | |
TTGTCATATGCCATTCCTAA+AGG | + | chr6_1:11338304-11338323 | Msa0875150:intron | 35.0% | |
GATTCTTTACTTCTGTTGAG+TGG | + | chr6_1:11338394-11338413 | Msa0875150:intron | 35.0% | |
TTATGTAATGGCACCTAAGT+TGG | + | chr6_1:11338486-11338505 | Msa0875150:intron | 35.0% | |
ATTTAGCAATCCTCCAACTT+AGG | - | chr6_1:11338502-11338521 | None:intergenic | 35.0% | |
GTTTATGTTACTATCCGTGT+TGG | + | chr6_1:11338569-11338588 | Msa0875150:intron | 35.0% | |
! | GGAGTATCTTAAAACATTCC+TGG | + | chr6_1:11338590-11338609 | Msa0875150:intron | 35.0% |
CTTGCCTTGGTTACTAAAAA+TGG | - | chr6_1:11338714-11338733 | None:intergenic | 35.0% | |
AAATCTTATCCTCCAACGAT+AGG | + | chr6_1:11338930-11338949 | Msa0875150:intron | 35.0% | |
TACCACTTAAATCCTATCGT+TGG | - | chr6_1:11338945-11338964 | None:intergenic | 35.0% | |
TGGTATAATTTACTACCCCA+AGG | + | chr6_1:11339070-11339089 | Msa0875150:intron | 35.0% | |
TATAATTTACTACCCCAAGG+TGG | + | chr6_1:11339073-11339092 | Msa0875150:intron | 35.0% | |
ATAATTTACTACCCCAAGGT+GGG | + | chr6_1:11339074-11339093 | Msa0875150:intron | 35.0% | |
TTAGTTAGAAAACCCACCTT+GGG | - | chr6_1:11339089-11339108 | None:intergenic | 35.0% | |
TTTAGTTAGAAAACCCACCT+TGG | - | chr6_1:11339090-11339109 | None:intergenic | 35.0% | |
!! | AAGGTGGGTTTTCTAACTAA+AGG | + | chr6_1:11339089-11339108 | Msa0875150:intron | 35.0% |
AAGCTTAGCAGTGGAATTAA+GGG | - | chr6_1:11339182-11339201 | None:intergenic | 35.0% | |
ACAACTCACAATACATGGTT+CGG | + | chr6_1:11339224-11339243 | Msa0875150:intron | 35.0% | |
! | ATGGTTAGCTAACGAAATTC+TGG | - | chr6_1:11339336-11339355 | None:intergenic | 35.0% |
! | TCAAGTGGTTGTTGTTGATA+TGG | - | chr6_1:11339355-11339374 | None:intergenic | 35.0% |
TCAACAACAACCACTTGATT+TGG | + | chr6_1:11339357-11339376 | Msa0875150:intron | 35.0% | |
TTTAACAACCACTCAATTCC+AGG | + | chr6_1:11339550-11339569 | Msa0875150:intron | 35.0% | |
! | TTGGGTTGTCATAAGATGTT+TGG | - | chr6_1:11339736-11339755 | None:intergenic | 35.0% |
TTGTGGTTACTAAAGGATCA+AGG | - | chr6_1:11339799-11339818 | None:intergenic | 35.0% | |
GCAAAAACAAGCTTAAGCAT+GGG | - | chr6_1:11340077-11340096 | None:intergenic | 35.0% | |
TGCAAAAACAAGCTTAAGCA+TGG | - | chr6_1:11340078-11340097 | None:intergenic | 35.0% | |
TTGCAAAGTCTTCACAAAAG+AGG | + | chr6_1:11340093-11340112 | Msa0875150:intron | 35.0% | |
AAAGTCTTCACAAAAGAGGA+AGG | + | chr6_1:11340097-11340116 | Msa0875150:intron | 35.0% | |
!! | GTTCTAGAGAGATAAGGAAA+TGG | + | chr6_1:11340315-11340334 | Msa0875150:intron | 35.0% |
AGACTTAAGTAAGGGCAAAA+TGG | - | chr6_1:11340393-11340412 | None:intergenic | 35.0% | |
TTCTCTCGTCTATATACAAC+GGG | - | chr6_1:11340549-11340568 | None:intergenic | 35.0% | |
GTTCTCTCGTCTATATACAA+CGG | - | chr6_1:11340550-11340569 | None:intergenic | 35.0% | |
TATGGAACATACGATATGCT+AGG | - | chr6_1:11340725-11340744 | None:intergenic | 35.0% | |
! | TCACTTTGAAAAACCCAACT+CGG | - | chr6_1:11340816-11340835 | None:intergenic | 35.0% |
!! | AGTTGGGTTTTTCAAAGTGA+TGG | + | chr6_1:11340816-11340835 | Msa0875150:intron | 35.0% |
!! | GTTGGGTTTTTCAAAGTGAT+GGG | + | chr6_1:11340817-11340836 | Msa0875150:intron | 35.0% |
GTTGTGATCTCTTTGACATA+TGG | + | chr6_1:11341306-11341325 | Msa0875150:intron | 35.0% | |
!! | TTTTTAGCATCCTTGCACAT+AGG | - | chr6_1:11341544-11341563 | None:intergenic | 35.0% |
AAGGATGCTAAAAATGCAGA+TGG | + | chr6_1:11341550-11341569 | Msa0875150:CDS | 35.0% | |
AGCAAGTTCTTTCACAATTG+TGG | + | chr6_1:11341648-11341667 | Msa0875150:CDS | 35.0% | |
GCAAGTTCTTTCACAATTGT+GGG | + | chr6_1:11341649-11341668 | Msa0875150:CDS | 35.0% | |
! | AAGGGAACACCTATCTTTTT+AGG | + | chr6_1:11341736-11341755 | Msa0875150:CDS | 35.0% |
TACACAGTTTGCCAAATGGT+CGG | - | chr6_1:11329243-11329262 | None:intergenic | 40.0% | |
TCAGTACACAGTTTGCCAAA+TGG | - | chr6_1:11329247-11329266 | None:intergenic | 40.0% | |
CTGATCCTAGTTAGTATTCC+AGG | + | chr6_1:11329270-11329289 | Msa0875150:five_prime_UTR | 40.0% | |
AAAAGAGTTGGAGACTAACC+TGG | - | chr6_1:11329291-11329310 | None:intergenic | 40.0% | |
ATCAAAGAGGGGAAAAGAGT+TGG | - | chr6_1:11329303-11329322 | None:intergenic | 40.0% | |
!!! | CATCCTCTGGTTTTCTGAAT+TGG | + | chr6_1:11329457-11329476 | Msa0875150:intron | 40.0% |
AACCCAATTCAGAAAACCAG+AGG | - | chr6_1:11329463-11329482 | None:intergenic | 40.0% | |
!! | ACTCTGGGACAATATTGTTG+TGG | + | chr6_1:11329871-11329890 | Msa0875150:CDS | 40.0% |
!! | CTCTGGGACAATATTGTTGT+GGG | + | chr6_1:11329872-11329891 | Msa0875150:CDS | 40.0% |
TCGATCCTAGAAAGCCTAAT+TGG | + | chr6_1:11329900-11329919 | Msa0875150:CDS | 40.0% | |
AAATTGTGAGACAGCACAAG+AGG | + | chr6_1:11329994-11330013 | Msa0875150:CDS | 40.0% | |
TTTCATGTGGCAGTGAAGAA+AGG | + | chr6_1:11330115-11330134 | Msa0875150:CDS | 40.0% | |
TCGCAAAAGTCATCCTCTAA+TGG | + | chr6_1:11330187-11330206 | Msa0875150:CDS | 40.0% | |
! | CACGAAGGAGTTGGTTAAAA+TGG | + | chr6_1:11330255-11330274 | Msa0875150:CDS | 40.0% |
! | CGAAGGAGTTGGTTAAAATG+GGG | + | chr6_1:11330257-11330276 | Msa0875150:CDS | 40.0% |
! | GAAGGAGTTGGTTAAAATGG+GGG | + | chr6_1:11330258-11330277 | Msa0875150:CDS | 40.0% |
GGTTAAGTGGATGCTTGATA+AGG | + | chr6_1:11330357-11330376 | Msa0875150:CDS | 40.0% | |
TAAAGTGAACCAACGAGTCT+TGG | - | chr6_1:11330494-11330513 | None:intergenic | 40.0% | |
!! | ATGAGTGGTAATGGGAAGAA+GGG | - | chr6_1:11330764-11330783 | None:intergenic | 40.0% |
!! | AATGAGTGGTAATGGGAAGA+AGG | - | chr6_1:11330765-11330784 | None:intergenic | 40.0% |
GCAGCATTAATTCAACACGA+TGG | + | chr6_1:11330892-11330911 | Msa0875150:CDS | 40.0% | |
ATCCCTACTGTATTTCACAG+TGG | + | chr6_1:11330979-11330998 | Msa0875150:intron | 40.0% | |
GTTCCACTGTGAAATACAGT+AGG | - | chr6_1:11330985-11331004 | None:intergenic | 40.0% | |
AATAATTGGAAGTCCCACGT+CGG | + | chr6_1:11331210-11331229 | Msa0875150:intron | 40.0% | |
AGATATCCCACTTTGGTGAA+CGG | + | chr6_1:11331272-11331291 | Msa0875150:intron | 40.0% | |
ACCATCTGCTTACAAAGTGT+TGG | + | chr6_1:11331531-11331550 | Msa0875150:intron | 40.0% | |
!! | CAAAGTGTTGGCGAAATTGT+TGG | + | chr6_1:11331543-11331562 | Msa0875150:intron | 40.0% |
AAATTGTTGGCAAACAGGCA+AGG | + | chr6_1:11331556-11331575 | Msa0875150:intron | 40.0% | |
AATTGTTGGCAAACAGGCAA+GGG | + | chr6_1:11331557-11331576 | Msa0875150:intron | 40.0% | |
GACGGGTCTTAATGCAAATA+AGG | + | chr6_1:11331605-11331624 | Msa0875150:intron | 40.0% | |
!! | ATGTGGGGTTTTGTCACAAA+TGG | + | chr6_1:11331731-11331750 | Msa0875150:intron | 40.0% |
AAAGGATTGGAGGCAATGAA+AGG | + | chr6_1:11331875-11331894 | Msa0875150:intron | 40.0% | |
AAGGATTGGAGGCAATGAAA+GGG | + | chr6_1:11331876-11331895 | Msa0875150:intron | 40.0% | |
GAAGTTAACAGAAGGACCAA+TGG | - | chr6_1:11332625-11332644 | None:intergenic | 40.0% | |
! | CTATGAGTTGCGTTTTTCGT+TGG | - | chr6_1:11332926-11332945 | None:intergenic | 40.0% |
GAACTGTTAAACGACGATGA+TGG | + | chr6_1:11333023-11333042 | Msa0875150:intron | 40.0% | |
CGAAATTGAAACGTAAGGCA+AGG | + | chr6_1:11333078-11333097 | Msa0875150:intron | 40.0% | |
! | TCCAACTGGTAGTGTTACAA+CGG | - | chr6_1:11333167-11333186 | None:intergenic | 40.0% |
!! | CAGAAGCTTTGGGTTGAAAA+TGG | - | chr6_1:11333201-11333220 | None:intergenic | 40.0% |
AAATGAAGCGCAGAAGCTTT+GGG | - | chr6_1:11333211-11333230 | None:intergenic | 40.0% | |
CAGGGAACAAAGCCAAAAAA+TGG | + | chr6_1:11333483-11333502 | Msa0875150:intron | 40.0% | |
!! | CTTACTTTTGCCCTTACCAA+GGG | - | chr6_1:11334472-11334491 | None:intergenic | 40.0% |
!! | ACTTACTTTTGCCCTTACCA+AGG | - | chr6_1:11334473-11334492 | None:intergenic | 40.0% |
GCATGACGTACTACAAATGA+AGG | + | chr6_1:11334590-11334609 | Msa0875150:intron | 40.0% | |
TCATGTGAGCATATCTCAGT+TGG | + | chr6_1:11334960-11334979 | Msa0875150:intron | 40.0% | |
CATTATTATATGTAGGGGCC+GGG | + | chr6_1:11334993-11335012 | Msa0875150:intron | 40.0% | |
ATTATTATATGTAGGGGCCG+GGG | + | chr6_1:11334994-11335013 | Msa0875150:intron | 40.0% | |
CCCCACTTATTCACCTTATA+AGG | + | chr6_1:11335032-11335051 | Msa0875150:intron | 40.0% | |
AATAGTACTTACCTTGCAGG+TGG | + | chr6_1:11335275-11335294 | Msa0875150:intron | 40.0% | |
ATGTTACAAGCAGCCAAGTA+TGG | + | chr6_1:11335683-11335702 | Msa0875150:CDS | 40.0% | |
TGTCAAAAGGCTGCTAAACA+TGG | - | chr6_1:11336047-11336066 | None:intergenic | 40.0% | |
GTCATGGATAGCACTTGATA+GGG | + | chr6_1:11336616-11336635 | Msa0875150:intron | 40.0% | |
TACGCTTAGTGACTTAGACA+AGG | - | chr6_1:11337242-11337261 | None:intergenic | 40.0% | |
AGTAAGTTGCACGTATCAAG+TGG | - | chr6_1:11337540-11337559 | None:intergenic | 40.0% | |
! | GTCTCTAAACTCAACCCTTT+TGG | + | chr6_1:11337663-11337682 | Msa0875150:intron | 40.0% |
GAAGCCTAACTAAGCAATCA+TGG | + | chr6_1:11337702-11337721 | Msa0875150:intron | 40.0% | |
! | TTTTACGGAATAAACCCAGG+TGG | + | chr6_1:11337862-11337881 | Msa0875150:intron | 40.0% |
TCAGAGTGGAATAAATTCCG+GGG | - | chr6_1:11337893-11337912 | None:intergenic | 40.0% | |
GTCAGAGTGGAATAAATTCC+GGG | - | chr6_1:11337894-11337913 | None:intergenic | 40.0% | |
GGTCAGAGTGGAATAAATTC+CGG | - | chr6_1:11337895-11337914 | None:intergenic | 40.0% | |
GGAATTTATTCCACTCTGAC+CGG | + | chr6_1:11337894-11337913 | Msa0875150:intron | 40.0% | |
GAAATTAATACCGGTCAGAG+TGG | - | chr6_1:11337907-11337926 | None:intergenic | 40.0% | |
GACCGGTATTAATTTCCAAC+TGG | + | chr6_1:11337911-11337930 | Msa0875150:intron | 40.0% | |
CGCCAGTTGGAAATTAATAC+CGG | - | chr6_1:11337916-11337935 | None:intergenic | 40.0% | |
CGGTATTAATTTCCAACTGG+CGG | + | chr6_1:11337914-11337933 | Msa0875150:intron | 40.0% | |
GGTATTAATTTCCAACTGGC+GGG | + | chr6_1:11337915-11337934 | Msa0875150:intron | 40.0% | |
GATATGCGTAGAACCTGAAT+AGG | - | chr6_1:11338283-11338302 | None:intergenic | 40.0% | |
!! | TTCGATTTCTAGCCGAACAA+TGG | + | chr6_1:11338638-11338657 | Msa0875150:intron | 40.0% |
TTAGAGCTTAACACTTGCCT+TGG | - | chr6_1:11338727-11338746 | None:intergenic | 40.0% | |
CACTTAAATCCTATCGTTGG+AGG | - | chr6_1:11338942-11338961 | None:intergenic | 40.0% | |
CTCCAACGATAGGATTTAAG+TGG | + | chr6_1:11338940-11338959 | Msa0875150:intron | 40.0% | |
TAGTTAGAAAACCCACCTTG+GGG | - | chr6_1:11339088-11339107 | None:intergenic | 40.0% | |
GAAGTTGCTAAAAGTGGTTG+TGG | - | chr6_1:11339121-11339140 | None:intergenic | 40.0% | |
GAAGCTTAGCAGTGGAATTA+AGG | - | chr6_1:11339183-11339202 | None:intergenic | 40.0% | |
!! | TAGAGGTGACTTTGAAGTTG+GGG | - | chr6_1:11339268-11339287 | None:intergenic | 40.0% |
!! | CTAGAGGTGACTTTGAAGTT+GGG | - | chr6_1:11339269-11339288 | None:intergenic | 40.0% |
!! | TCTAGAGGTGACTTTGAAGT+TGG | - | chr6_1:11339270-11339289 | None:intergenic | 40.0% |
TCACCTCTAGACTTCAATAC+TGG | + | chr6_1:11339279-11339298 | Msa0875150:intron | 40.0% | |
CAATACTGGACCAAAATCCA+TGG | + | chr6_1:11339293-11339312 | Msa0875150:intron | 40.0% | |
!! | ACCACTTGATTTGGAGTTAC+AGG | + | chr6_1:11339366-11339385 | Msa0875150:intron | 40.0% |
!! | CCACTTGATTTGGAGTTACA+GGG | + | chr6_1:11339367-11339386 | Msa0875150:intron | 40.0% |
! | TTTCTGCTGGATTCTGGTTA+CGG | - | chr6_1:11339433-11339452 | None:intergenic | 40.0% |
! | TGGTATTTTCTGCTGGATTC+TGG | - | chr6_1:11339439-11339458 | None:intergenic | 40.0% |
GCTGCATGTTGTTCTATACT+TGG | - | chr6_1:11339697-11339716 | None:intergenic | 40.0% | |
TGCATGCTTGTGGTTACTAA+AGG | - | chr6_1:11339806-11339825 | None:intergenic | 40.0% | |
! | ACACTGATTATGCATGCTTG+TGG | - | chr6_1:11339816-11339835 | None:intergenic | 40.0% |
TGTAGTAGAGATTGAGCTAG+AGG | - | chr6_1:11339892-11339911 | None:intergenic | 40.0% | |
TTAGTGGCTGTTGGTATTAC+AGG | - | chr6_1:11340053-11340072 | None:intergenic | 40.0% | |
AAGCTTAAGCATGGGATTAG+TGG | - | chr6_1:11340069-11340088 | None:intergenic | 40.0% | |
TCTTCACAAAAGAGGAAGGA+AGG | + | chr6_1:11340101-11340120 | Msa0875150:intron | 40.0% | |
ATTCCTCTTCCTTCTCTTAC+TGG | - | chr6_1:11340138-11340157 | None:intergenic | 40.0% | |
AGACGTGAGATTAAGAGAGA+GGG | + | chr6_1:11340277-11340296 | Msa0875150:intron | 40.0% | |
!! | GACAAGGTTCTAGAGAGATA+AGG | + | chr6_1:11340309-11340328 | Msa0875150:intron | 40.0% |
TTGCCCTTACTTAAGTCTCA+AGG | + | chr6_1:11340395-11340414 | Msa0875150:intron | 40.0% | |
TCTTTGCACTTCCCAAAGAA+CGG | - | chr6_1:11340787-11340806 | None:intergenic | 40.0% | |
!!! | TTTCTTTTTTGAGTGGGGGT+GGG | - | chr6_1:11340873-11340892 | None:intergenic | 40.0% |
!!! | TTTTCTTTTTTGAGTGGGGG+TGG | - | chr6_1:11340874-11340893 | None:intergenic | 40.0% |
! | AGTCAAGTCTCCGTTTTCAT+AGG | + | chr6_1:11341085-11341104 | Msa0875150:intron | 40.0% |
! | GTCAAGTCTCCGTTTTCATA+GGG | + | chr6_1:11341086-11341105 | Msa0875150:intron | 40.0% |
GCACTCAAAGTAGATCTACA+CGG | - | chr6_1:11341414-11341433 | None:intergenic | 40.0% | |
! | CACAAGCTGCTCATGATTTT+TGG | - | chr6_1:11341599-11341618 | None:intergenic | 40.0% |
TTGTGAATGAAGGTCGACAA+TGG | + | chr6_1:11341614-11341633 | Msa0875150:CDS | 40.0% | |
TGTGAATGAAGGTCGACAAT+GGG | + | chr6_1:11341615-11341634 | Msa0875150:CDS | 40.0% | |
TTGCTGCTATTATGATCCAG+CGG | - | chr6_1:11341987-11342006 | None:intergenic | 40.0% | |
! | GCTCATACGCATCTTTTTAG+AGG | + | chr6_1:11342047-11342066 | Msa0875150:CDS | 40.0% |
! | ATCCTTGTTTCTTCTCAAGG+AGG | - | chr6_1:11342101-11342120 | None:intergenic | 40.0% |
GACATGAGTCAATGAGTGTG+TGG | - | chr6_1:11329194-11329213 | None:intergenic | 45.0% | |
!! | CACACTCATTGACTCATGTC+TGG | + | chr6_1:11329194-11329213 | Msa0875150:five_prime_UTR | 45.0% |
TCTTTGATCTGCCGACCATT+TGG | + | chr6_1:11329229-11329248 | Msa0875150:five_prime_UTR | 45.0% | |
TTCAGAAAACCAGAGGATGC+AGG | - | chr6_1:11329456-11329475 | None:intergenic | 45.0% | |
AAGAGAAGTCCGACCATTAG+AGG | - | chr6_1:11330203-11330222 | None:intergenic | 45.0% | |
ATTGACAGAGAAAGACTGGG+AGG | + | chr6_1:11330285-11330304 | Msa0875150:CDS | 45.0% | |
TTGACAGAGAAAGACTGGGA+GGG | + | chr6_1:11330286-11330305 | Msa0875150:CDS | 45.0% | |
AAGTGGATGCTTGATAAGGG+AGG | + | chr6_1:11330361-11330380 | Msa0875150:CDS | 45.0% | |
!! | TGAGTGGTAATGGGAAGAAG+GGG | - | chr6_1:11330763-11330782 | None:intergenic | 45.0% |
CAATGTACGCGGCCTATATA+TGG | + | chr6_1:11330946-11330965 | Msa0875150:intron | 45.0% | |
CACTATGTTCTATCCGACGT+GGG | - | chr6_1:11331226-11331245 | None:intergenic | 45.0% | |
ACACTATGTTCTATCCGACG+TGG | - | chr6_1:11331227-11331246 | None:intergenic | 45.0% | |
GCTCTTGAGATATCCCACTT+TGG | + | chr6_1:11331265-11331284 | Msa0875150:intron | 45.0% | |
GCCAACACTTTGTAAGCAGA+TGG | - | chr6_1:11331535-11331554 | None:intergenic | 45.0% | |
TGGCGAAATTGTTGGCAAAC+AGG | + | chr6_1:11331551-11331570 | Msa0875150:intron | 45.0% | |
CTTTCAAGGTCTATGTAGGG+TGG | - | chr6_1:11332265-11332284 | None:intergenic | 45.0% | |
ACCATTGAATCACGAGACGA+AGG | + | chr6_1:11332295-11332314 | Msa0875150:intron | 45.0% | |
TCCTTCGTCTCGTGATTCAA+TGG | - | chr6_1:11332299-11332318 | None:intergenic | 45.0% | |
AAAACTAACGGTGTGTCACG+TGG | + | chr6_1:11332661-11332680 | Msa0875150:intron | 45.0% | |
TCCGTTGTAACACTACCAGT+TGG | + | chr6_1:11333163-11333182 | Msa0875150:intron | 45.0% | |
GAAATGAAGCGCAGAAGCTT+TGG | - | chr6_1:11333212-11333231 | None:intergenic | 45.0% | |
! | ATCAGTTATTTCACGCCACG+TGG | - | chr6_1:11333352-11333371 | None:intergenic | 45.0% |
CGTGAAATAACTGATCCACG+TGG | + | chr6_1:11333357-11333376 | Msa0875150:intron | 45.0% | |
GTGAGCATATCTCAGTTGGT+AGG | + | chr6_1:11334964-11334983 | Msa0875150:intron | 45.0% | |
CGAAATCTCTTGCAGGTTGT+TGG | + | chr6_1:11335298-11335317 | Msa0875150:CDS | 45.0% | |
!!! | TCATGTTTTGGTCGATCTGC+AGG | + | chr6_1:11335425-11335444 | Msa0875150:CDS | 45.0% |
!!! | CATGTTTTGGTCGATCTGCA+GGG | + | chr6_1:11335426-11335445 | Msa0875150:CDS | 45.0% |
!! | TCCTGACCTTTTATGGGCTA+TGG | + | chr6_1:11335742-11335761 | Msa0875150:CDS | 45.0% |
TCCATAGCCCATAAAAGGTC+AGG | - | chr6_1:11335746-11335765 | None:intergenic | 45.0% | |
TTGCATTTGAAGAGCGGCAT+TGG | - | chr6_1:11335948-11335967 | None:intergenic | 45.0% | |
GTGCTATCCATGACGTGATA+GGG | - | chr6_1:11336610-11336629 | None:intergenic | 45.0% | |
AGTGCTATCCATGACGTGAT+AGG | - | chr6_1:11336611-11336630 | None:intergenic | 45.0% | |
CGTCATGGATAGCACTTGAT+AGG | + | chr6_1:11336615-11336634 | Msa0875150:intron | 45.0% | |
TCTAGACTCTCGATGTGATC+CGG | + | chr6_1:11336944-11336963 | Msa0875150:intron | 45.0% | |
TGATCGATCAACGGTGTAGT+CGG | - | chr6_1:11336972-11336991 | None:intergenic | 45.0% | |
GCTTAGTGACTTAGACAAGG+AGG | - | chr6_1:11337239-11337258 | None:intergenic | 45.0% | |
GAGGTAGATATGCAGTCGAA+GGG | - | chr6_1:11337518-11337537 | None:intergenic | 45.0% | |
AAGTTGCACGTATCAAGTGG+AGG | - | chr6_1:11337537-11337556 | None:intergenic | 45.0% | |
TTCCACCTATCCTAGACTGT+AGG | + | chr6_1:11337611-11337630 | Msa0875150:intron | 45.0% | |
! | GATTGCCTACAGTCTAGGAT+AGG | - | chr6_1:11337619-11337638 | None:intergenic | 45.0% |
CTAGACTGTAGGCAATCTCA+GGG | + | chr6_1:11337622-11337641 | Msa0875150:intron | 45.0% | |
TAGAGACAGATGGTGATCCT+AGG | - | chr6_1:11337650-11337669 | None:intergenic | 45.0% | |
GGGTTGAGTTTAGAGACAGA+TGG | - | chr6_1:11337660-11337679 | None:intergenic | 45.0% | |
AACCTTTCGTATCCAACTGG+CGG | + | chr6_1:11338018-11338037 | Msa0875150:intron | 45.0% | |
ATCCTCATCTCCACTACTGA+CGG | + | chr6_1:11338110-11338129 | Msa0875150:intron | 45.0% | |
! | TGTAATGGCACCTAAGTTGG+AGG | + | chr6_1:11338489-11338508 | Msa0875150:intron | 45.0% |
GAAGAACAGAAGCTTAGCAG+TGG | - | chr6_1:11339191-11339210 | None:intergenic | 45.0% | |
!! | AGAGGTGACTTTGAAGTTGG+GGG | - | chr6_1:11339267-11339286 | None:intergenic | 45.0% |
! | GGTCCAGTATTGAAGTCTAG+AGG | - | chr6_1:11339285-11339304 | None:intergenic | 45.0% |
TGGACCAAAATCCATGGAAC+TGG | + | chr6_1:11339299-11339318 | Msa0875150:intron | 45.0% | |
! | GACACCAGTTCCATGGATTT+TGG | - | chr6_1:11339306-11339325 | None:intergenic | 45.0% |
!! | ACGTTTTGACACCAGTTCCA+TGG | - | chr6_1:11339313-11339332 | None:intergenic | 45.0% |
CCCTGTAACTCCAAATCAAG+TGG | - | chr6_1:11339370-11339389 | None:intergenic | 45.0% | |
!!! | TGGTTACGGGTTTTGGAACA+GGG | - | chr6_1:11339419-11339438 | None:intergenic | 45.0% |
!! | TGGATTCTGGTTACGGGTTT+TGG | - | chr6_1:11339426-11339445 | None:intergenic | 45.0% |
! | TTCTGCTGGATTCTGGTTAC+GGG | - | chr6_1:11339432-11339451 | None:intergenic | 45.0% |
CTGTGTAACCTGGAATTGAG+TGG | - | chr6_1:11339561-11339580 | None:intergenic | 45.0% | |
TTGAGCTAGAGGCAGTAAGA+AGG | - | chr6_1:11339881-11339900 | None:intergenic | 45.0% | |
CAAAAGAGGAAGGAAGGAAG+AGG | + | chr6_1:11340107-11340126 | Msa0875150:intron | 45.0% | |
CAGACGTGAGATTAAGAGAG+AGG | + | chr6_1:11340276-11340295 | Msa0875150:intron | 45.0% | |
!! | TACAACGGGTTGTGTAAGTG+AGG | - | chr6_1:11340535-11340554 | None:intergenic | 45.0% |
ACGAGAGAACTCACCTTACA+AGG | + | chr6_1:11340560-11340579 | Msa0875150:intron | 45.0% | |
CTCTGCATCTGTCTATCCAT+TGG | - | chr6_1:11340764-11340783 | None:intergenic | 45.0% | |
!!! | TTCTTTTTTGAGTGGGGGTG+GGG | - | chr6_1:11340872-11340891 | None:intergenic | 45.0% |
CAGGGTCATCCCTATGAAAA+CGG | - | chr6_1:11341098-11341117 | None:intergenic | 45.0% | |
GATGTAAGAGTGGGTCATGT+CGG | + | chr6_1:11341122-11341141 | Msa0875150:intron | 45.0% | |
GATGGGGAACGTACAATTAG+TGG | - | chr6_1:11341213-11341232 | None:intergenic | 45.0% | |
ATCTTCCCGTATAGCAAGCA+AGG | - | chr6_1:11341235-11341254 | None:intergenic | 45.0% | |
TTAGCATCCTTGCACATAGG+AGG | - | chr6_1:11341541-11341560 | None:intergenic | 45.0% | |
CATGAGCAGCTTGTGAATGA+AGG | + | chr6_1:11341604-11341623 | Msa0875150:CDS | 45.0% | |
TTTGCTTGATCGTTTCCTCC+TGG | - | chr6_1:11341718-11341737 | None:intergenic | 45.0% | |
AGGAGGAAACGATCAAGCAA+AGG | + | chr6_1:11341717-11341736 | Msa0875150:CDS | 45.0% | |
GGAGGAAACGATCAAGCAAA+GGG | + | chr6_1:11341718-11341737 | Msa0875150:CDS | 45.0% | |
CCTCAGCATAACGAGAAGTA+AGG | - | chr6_1:11341846-11341865 | None:intergenic | 45.0% | |
CCTTACTTCTCGTTATGCTG+AGG | + | chr6_1:11341843-11341862 | Msa0875150:CDS | 45.0% | |
TGCACTTGCTCTCATGCTAA+AGG | + | chr6_1:11341957-11341976 | Msa0875150:CDS | 45.0% | |
GCACTTGCTCTCATGCTAAA+GGG | + | chr6_1:11341958-11341977 | Msa0875150:CDS | 45.0% | |
CACTTGCTCTCATGCTAAAG+GGG | + | chr6_1:11341959-11341978 | Msa0875150:CDS | 45.0% | |
GTCCTCCTTGAGAAGAAACA+AGG | + | chr6_1:11342096-11342115 | Msa0875150:CDS | 45.0% | |
!! | TATGTATATAAATAAAAAAT+TGG | + | chr6_1:11331435-11331454 | Msa0875150:intron | 5.0% |
!!! | ATTTTTTTTTATAAAAATGT+TGG | + | chr6_1:11332196-11332215 | Msa0875150:intron | 5.0% |
!!! | ATTTTTTAATGAAATTTTTT+AGG | + | chr6_1:11332497-11332516 | Msa0875150:intron | 5.0% |
!!! | TAAAAAATTCTAATTTTTTT+GGG | - | chr6_1:11333580-11333599 | None:intergenic | 5.0% |
!!! | TTAAAAAATTCTAATTTTTT+TGG | - | chr6_1:11333581-11333600 | None:intergenic | 5.0% |
!!! | TTAGTATTTTTTTTTTTTTT+TGG | - | chr6_1:11333943-11333962 | None:intergenic | 5.0% |
!!! | TTTGATTTTTATTTTTTTTT+TGG | - | chr6_1:11335084-11335103 | None:intergenic | 5.0% |
!! | AAAAAAAAAATAAAAATCAA+AGG | + | chr6_1:11335083-11335102 | Msa0875150:intron | 5.0% |
!!! | TTTAATTTATTGAAATATTT+AGG | - | chr6_1:11335171-11335190 | None:intergenic | 5.0% |
!!! | TTATTTTTTTTATTTTTTTG+AGG | - | chr6_1:11335209-11335228 | None:intergenic | 5.0% |
!! | AAATTATATAAATAATTGTA+TGG | - | chr6_1:11336517-11336536 | None:intergenic | 5.0% |
!!! | AAAAATATTTTTTCTAAAAA+AGG | - | chr6_1:11336697-11336716 | None:intergenic | 5.0% |
AATGAGTGTGTGGTGAGTGG+TGG | - | chr6_1:11329184-11329203 | None:intergenic | 50.0% | |
GTCAATGAGTGTGTGGTGAG+TGG | - | chr6_1:11329187-11329206 | None:intergenic | 50.0% | |
!! | AATGGTGCCACGTTTGTGTG+AGG | + | chr6_1:11329423-11329442 | Msa0875150:intron | 50.0% |
!! | ATGGTGCCACGTTTGTGTGA+GGG | + | chr6_1:11329424-11329443 | Msa0875150:intron | 50.0% |
! | TGGCAGTGAAGAAAGGCATG+TGG | + | chr6_1:11330122-11330141 | Msa0875150:CDS | 50.0% |
! | TTTGCTGCGGCAAGAAGTAC+TGG | - | chr6_1:11330439-11330458 | None:intergenic | 50.0% |
AGTACTTCTTGCCGCAGCAA+AGG | + | chr6_1:11330438-11330457 | Msa0875150:CDS | 50.0% | |
GTACTTCTTGCCGCAGCAAA+GGG | + | chr6_1:11330439-11330458 | Msa0875150:CDS | 50.0% | |
TTCTTTGTGGCCCTTTGCTG+CGG | - | chr6_1:11330452-11330471 | None:intergenic | 50.0% | |
GGGAAGAAGGGGAAACCAAT+TGG | - | chr6_1:11330752-11330771 | None:intergenic | 50.0% | |
CTATACCCCTTGATCCTCGT+CGG | + | chr6_1:11330813-11330832 | Msa0875150:intron | 50.0% | |
TTGAACCGACGAGGATCAAG+GGG | - | chr6_1:11330821-11330840 | None:intergenic | 50.0% | |
GTTGAACCGACGAGGATCAA+GGG | - | chr6_1:11330822-11330841 | None:intergenic | 50.0% | |
AAGATCACGTTGAACCGACG+AGG | - | chr6_1:11330830-11330849 | None:intergenic | 50.0% | |
TCCCACTTTGGTGAACGGAT+AGG | + | chr6_1:11331277-11331296 | Msa0875150:intron | 50.0% | |
GCCTATCCGTTCACCAAAGT+GGG | - | chr6_1:11331281-11331300 | None:intergenic | 50.0% | |
ACAAGCTGAAGCTCACGCTA+AGG | - | chr6_1:11331315-11331334 | None:intergenic | 50.0% | |
GGCAAGGGTAGTGATAGCTA+AGG | + | chr6_1:11331572-11331591 | Msa0875150:intron | 50.0% | |
GGAGGCAATGAAAGGGTAGT+AGG | + | chr6_1:11331883-11331902 | Msa0875150:intron | 50.0% | |
! | ACCAGTTATTTCACGCCACG+TGG | + | chr6_1:11332684-11332703 | Msa0875150:intron | 50.0% |
TCCACGTGGCGTGAAATAAC+TGG | - | chr6_1:11332688-11332707 | None:intergenic | 50.0% | |
GGCAAGGCAACGAAACGAAT+TGG | + | chr6_1:11333094-11333113 | Msa0875150:intron | 50.0% | |
TGGCTCGTAGTGTTTCCAAC+TGG | - | chr6_1:11333181-11333200 | None:intergenic | 50.0% | |
AAAACTAACGGTGTGCCACG+TGG | - | chr6_1:11333375-11333394 | None:intergenic | 50.0% | |
! | AGGTGAATAAGTGGGGTGTC+CGG | - | chr6_1:11335028-11335047 | None:intergenic | 50.0% |
AAGAGATTTCGCCACCTGCA+AGG | - | chr6_1:11335289-11335308 | None:intergenic | 50.0% | |
AGGTTGGCGAAATCTCTTGC+AGG | + | chr6_1:11335344-11335363 | Msa0875150:CDS | 50.0% | |
CTGCACCTAGCAGCTGAATT+AGG | + | chr6_1:11335896-11335915 | Msa0875150:CDS | 50.0% | |
AAGGGCCTAATTCAGCTGCT+AGG | - | chr6_1:11335904-11335923 | None:intergenic | 50.0% | |
ATTGGATCCATGACCACGGT+AGG | - | chr6_1:11335930-11335949 | None:intergenic | 50.0% | |
GGAGGTAGATATGCAGTCGA+AGG | - | chr6_1:11337519-11337538 | None:intergenic | 50.0% | |
! | TGCCTACAGTCTAGGATAGG+TGG | - | chr6_1:11337616-11337635 | None:intergenic | 50.0% |
CCTGAGATTGCCTACAGTCT+AGG | - | chr6_1:11337624-11337643 | None:intergenic | 50.0% | |
CCTAGACTGTAGGCAATCTC+AGG | + | chr6_1:11337621-11337640 | Msa0875150:intron | 50.0% | |
TAGGCAATCTCAGGGAACCT+AGG | + | chr6_1:11337630-11337649 | Msa0875150:intron | 50.0% | |
CCACGATAATCAGAGGAGTC+CGG | - | chr6_1:11337960-11337979 | None:intergenic | 50.0% | |
CGGACTCCTCTGATTATCGT+GGG | + | chr6_1:11337958-11337977 | Msa0875150:intron | 50.0% | |
GGACTCCTCTGATTATCGTG+GGG | + | chr6_1:11337959-11337978 | Msa0875150:intron | 50.0% | |
GATGACCCCACGATAATCAG+AGG | - | chr6_1:11337967-11337986 | None:intergenic | 50.0% | |
TTATCGTGGGGTCATCCTCA+CGG | + | chr6_1:11337971-11337990 | Msa0875150:intron | 50.0% | |
GGGAACCTTTCGTATCCAAC+TGG | + | chr6_1:11338015-11338034 | Msa0875150:intron | 50.0% | |
ACCTTTCGTATCCAACTGGC+GGG | + | chr6_1:11338019-11338038 | Msa0875150:intron | 50.0% | |
TCCTCATCTCCACTACTGAC+GGG | + | chr6_1:11338111-11338130 | Msa0875150:intron | 50.0% | |
GGAACAGGGCTCCACTAAAA+CGG | - | chr6_1:11339405-11339424 | None:intergenic | 50.0% | |
!!! | CTGGTTACGGGTTTTGGAAC+AGG | - | chr6_1:11339420-11339439 | None:intergenic | 50.0% |
! | GCAACTCTTGCTGTGTAACC+TGG | - | chr6_1:11339571-11339590 | None:intergenic | 50.0% |
! | AGCATGGGATTAGTGGCTGT+TGG | - | chr6_1:11340062-11340081 | None:intergenic | 50.0% |
GAGGTACGACCAGTAAGAGA+AGG | + | chr6_1:11340126-11340145 | Msa0875150:intron | 50.0% | |
CGACCAGTAAGAGAAGGAAG+AGG | + | chr6_1:11340132-11340151 | Msa0875150:intron | 50.0% | |
CGTGAGATTAAGAGAGAGGG+AGG | + | chr6_1:11340280-11340299 | Msa0875150:intron | 50.0% | |
ACAGATGCAGAGCCGTTCTT+TGG | + | chr6_1:11340772-11340791 | Msa0875150:intron | 50.0% | |
CAGATGCAGAGCCGTTCTTT+GGG | + | chr6_1:11340773-11340792 | Msa0875150:intron | 50.0% | |
TGCAAAGAGCTCAACCGAGT+TGG | + | chr6_1:11340799-11340818 | Msa0875150:intron | 50.0% | |
GCAAAGAGCTCAACCGAGTT+GGG | + | chr6_1:11340800-11340819 | Msa0875150:intron | 50.0% | |
! | CGTTTTCATAGGGATGACCC+TGG | + | chr6_1:11341096-11341115 | Msa0875150:intron | 50.0% |
ACCCTGGACAGATGTAAGAG+TGG | + | chr6_1:11341112-11341131 | Msa0875150:intron | 50.0% | |
CCCACTCTTACATCTGTCCA+GGG | - | chr6_1:11341116-11341135 | None:intergenic | 50.0% | |
CCCTGGACAGATGTAAGAGT+GGG | + | chr6_1:11341113-11341132 | Msa0875150:intron | 50.0% | |
ACCCACTCTTACATCTGTCC+AGG | - | chr6_1:11341117-11341136 | None:intergenic | 50.0% | |
CCGTATAGCAAGCAAGGATG+GGG | - | chr6_1:11341229-11341248 | None:intergenic | 50.0% | |
!! | CCCCATCCTTGCTTGCTATA+CGG | + | chr6_1:11341226-11341245 | Msa0875150:intron | 50.0% |
CCCGTATAGCAAGCAAGGAT+GGG | - | chr6_1:11341230-11341249 | None:intergenic | 50.0% | |
!! | CCCATCCTTGCTTGCTATAC+GGG | + | chr6_1:11341227-11341246 | Msa0875150:intron | 50.0% |
TCCCGTATAGCAAGCAAGGA+TGG | - | chr6_1:11341231-11341250 | None:intergenic | 50.0% | |
AATGCTCTCTACCGCCTGTA+TGG | - | chr6_1:11341515-11341534 | None:intergenic | 50.0% | |
CATTGTGCCTCCTATGTGCA+AGG | + | chr6_1:11341531-11341550 | Msa0875150:CDS | 50.0% | |
!! | TGGTGCCACGTTTGTGTGAG+GGG | + | chr6_1:11329425-11329444 | Msa0875150:intron | 55.0% |
TGCATCCCCTCACACAAACG+TGG | - | chr6_1:11329433-11329452 | None:intergenic | 55.0% | |
GTGAGACAGCACAAGAGGCT+TGG | + | chr6_1:11329999-11330018 | Msa0875150:CDS | 55.0% | |
! | CTTCACGTCGCAGTTGATGC+AGG | + | chr6_1:11330220-11330239 | Msa0875150:CDS | 55.0% |
CGTTGAACCGACGAGGATCA+AGG | - | chr6_1:11330823-11330842 | None:intergenic | 55.0% | |
GGCCTATCCGTTCACCAAAG+TGG | - | chr6_1:11331282-11331301 | None:intergenic | 55.0% | |
! | GTGAATAAGTGGGGTGTCCG+GGG | - | chr6_1:11335026-11335045 | None:intergenic | 55.0% |
! | GGTGAATAAGTGGGGTGTCC+GGG | - | chr6_1:11335027-11335046 | None:intergenic | 55.0% |
CAGGTGGCGAAATCTCTTGC+AGG | + | chr6_1:11335291-11335310 | Msa0875150:intron | 55.0% | |
CATGACCACGGTAGGAGGAA+GGG | - | chr6_1:11335922-11335941 | None:intergenic | 55.0% | |
! | CGGCATTGGATCCATGACCA+CGG | - | chr6_1:11335934-11335953 | None:intergenic | 55.0% |
ATCAACGGTGTAGTCGGAGC+CGG | - | chr6_1:11336966-11336985 | None:intergenic | 55.0% | |
CATTGCACAACACGCCGACA+TGG | - | chr6_1:11337125-11337144 | None:intergenic | 55.0% | |
CATGTCGGCGTGTTGTGCAA+TGG | + | chr6_1:11337123-11337142 | Msa0875150:intron | 55.0% | |
AAACCCAGGTGGAGTAACCC+CGG | + | chr6_1:11337873-11337892 | Msa0875150:intron | 55.0% | |
ATTCCGGGGTTACTCCACCT+GGG | - | chr6_1:11337879-11337898 | None:intergenic | 55.0% | |
AATTCCGGGGTTACTCCACC+TGG | - | chr6_1:11337880-11337899 | None:intergenic | 55.0% | |
AACCCAACTGACGGGGATAC+CGG | + | chr6_1:11337938-11337957 | Msa0875150:intron | 55.0% | |
CCGGACTCCTCTGATTATCG+TGG | + | chr6_1:11337957-11337976 | Msa0875150:intron | 55.0% | |
ATAGTGCCCGTTCCAACTGG+CGG | + | chr6_1:11337994-11338013 | Msa0875150:intron | 55.0% | |
AAGGTTCCCGCCAGTTGGAA+CGG | - | chr6_1:11338004-11338023 | None:intergenic | 55.0% | |
TACGAAAGGTTCCCGCCAGT+TGG | - | chr6_1:11338009-11338028 | None:intergenic | 55.0% | |
TCCCGCCAGTTGGATACGAA+AGG | - | chr6_1:11338023-11338042 | None:intergenic | 55.0% | |
CCTCATCTCCACTACTGACG+GGG | + | chr6_1:11338112-11338131 | Msa0875150:intron | 55.0% | |
GAGAGGGAGGAGAGAAGACA+AGG | + | chr6_1:11340293-11340312 | Msa0875150:intron | 55.0% | |
GCAGCAGCTTTCACTGTTCC+AGG | + | chr6_1:11341697-11341716 | Msa0875150:CDS | 55.0% | |
GCAGCTTTCACTGTTCCAGG+AGG | + | chr6_1:11341700-11341719 | Msa0875150:CDS | 55.0% | |
!! | TCATGCTAAAGGGGTACCGC+TGG | + | chr6_1:11341968-11341987 | Msa0875150:CDS | 55.0% |
! | GTGTGGTGAGTGGTGGTGAG+TGG | - | chr6_1:11329177-11329196 | None:intergenic | 60.0% |
TTGGTGAACGGATAGGCCGC+CGG | + | chr6_1:11331284-11331303 | Msa0875150:intron | 60.0% | |
TGGCGGCAGTTAACTACCGC+TGG | + | chr6_1:11331455-11331474 | Msa0875150:intron | 60.0% | |
GGCGGCAGTTAACTACCGCT+GGG | + | chr6_1:11331456-11331475 | Msa0875150:intron | 60.0% | |
TTAGGCCCTTCCTCCTACCG+TGG | + | chr6_1:11335914-11335933 | Msa0875150:CDS | 60.0% | |
CCATGACCACGGTAGGAGGA+AGG | - | chr6_1:11335923-11335942 | None:intergenic | 60.0% | |
CCTTCCTCCTACCGTGGTCA+TGG | + | chr6_1:11335920-11335939 | Msa0875150:CDS | 60.0% | |
GGATCCATGACCACGGTAGG+AGG | - | chr6_1:11335927-11335946 | None:intergenic | 60.0% | |
GCACAACACGCCGACATGGT+TGG | - | chr6_1:11337121-11337140 | None:intergenic | 60.0% | |
TCAGTTGGGTTCCCGCCAGT+TGG | - | chr6_1:11337929-11337948 | None:intergenic | 60.0% | |
ACTGGCGGGAACCCAACTGA+CGG | + | chr6_1:11337929-11337948 | Msa0875150:intron | 60.0% | |
GTCCGGTATCCCCGTCAGTT+GGG | - | chr6_1:11337943-11337962 | None:intergenic | 60.0% | |
AGTCCGGTATCCCCGTCAGT+TGG | - | chr6_1:11337944-11337963 | None:intergenic | 60.0% | |
TGGAACGGGCACTATCCGTG+AGG | - | chr6_1:11337989-11338008 | None:intergenic | 60.0% | |
CGGATAGTGCCCGTTCCAAC+TGG | + | chr6_1:11337991-11338010 | Msa0875150:intron | 60.0% | |
TAGTGCCCGTTCCAACTGGC+GGG | + | chr6_1:11337995-11338014 | Msa0875150:intron | 60.0% | |
AGGTTCCCGCCAGTTGGAAC+GGG | - | chr6_1:11338003-11338022 | None:intergenic | 60.0% | |
GCTTTCGCTATCCCGCCAGT+TGG | - | chr6_1:11338033-11338052 | None:intergenic | 60.0% | |
! | CCCCGTCAGTAGTGGAGATG+AGG | - | chr6_1:11338115-11338134 | None:intergenic | 60.0% |
! | CTCTAGCTCCCCGTCAGTAG+TGG | - | chr6_1:11338123-11338142 | None:intergenic | 60.0% |
CTACTGACGGGGAGCTAGAG+AGG | + | chr6_1:11338123-11338142 | Msa0875150:intron | 60.0% | |
GGGGATGCACCTGCATCCTC+TGG | + | chr6_1:11329444-11329463 | Msa0875150:intron | 65.0% | |
TGAACGGATAGGCCGCCGGT+CGG | + | chr6_1:11331288-11331307 | Msa0875150:intron | 65.0% | |
AGCTCACGCTAAGGCCCGAC+CGG | - | chr6_1:11331306-11331325 | None:intergenic | 65.0% | |
CTGGCGGGAACCCAACTGAC+GGG | + | chr6_1:11337930-11337949 | Msa0875150:intron | 65.0% | |
TGGCGGGAACCCAACTGACG+GGG | + | chr6_1:11337931-11337950 | Msa0875150:intron | 65.0% | |
GAACGGATAGGCCGCCGGTC+GGG | + | chr6_1:11331289-11331308 | Msa0875150:intron | 70.0% | |
TCACGCTAAGGCCCGACCGG+CGG | - | chr6_1:11331303-11331322 | None:intergenic | 70.0% | |
GGTGTCCGGGGTTCGAACCC+CGG | - | chr6_1:11335014-11335033 | None:intergenic | 70.0% | |
AGGGGCCGGGGTTCGAACCC+CGG | + | chr6_1:11335006-11335025 | Msa0875150:intron | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6_1 | gene | 11329169 | 11342208 | 11329169 | ID=Msa0875150;Name=Msa0875150 |
chr6_1 | mRNA | 11329169 | 11342208 | 11329169 | ID=Msa0875150-mRNA-1;Parent=Msa0875150;Name=Msa0875150-mRNA-1;_AED=0.08;_eAED=0.08;_QI=129|0.8|0.83|1|0.8|0.83|6|86|695 |
chr6_1 | exon | 11329169 | 11329291 | 11329169 | ID=Msa0875150-mRNA-1:exon:3485;Parent=Msa0875150-mRNA-1 |
chr6_1 | exon | 11329758 | 11330577 | 11329758 | ID=Msa0875150-mRNA-1:exon:3486;Parent=Msa0875150-mRNA-1 |
chr6_1 | exon | 11330884 | 11330949 | 11330884 | ID=Msa0875150-mRNA-1:exon:3487;Parent=Msa0875150-mRNA-1 |
chr6_1 | exon | 11335294 | 11335464 | 11335294 | ID=Msa0875150-mRNA-1:exon:3488;Parent=Msa0875150-mRNA-1 |
chr6_1 | exon | 11335555 | 11335988 | 11335555 | ID=Msa0875150-mRNA-1:exon:3489;Parent=Msa0875150-mRNA-1 |
chr6_1 | exon | 11341520 | 11342208 | 11341520 | ID=Msa0875150-mRNA-1:exon:3490;Parent=Msa0875150-mRNA-1 |
chr6_1 | five_prime_UTR | 11329169 | 11329291 | 11329169 | ID=Msa0875150-mRNA-1:five_prime_utr;Parent=Msa0875150-mRNA-1 |
chr6_1 | five_prime_UTR | 11329758 | 11329763 | 11329758 | ID=Msa0875150-mRNA-1:five_prime_utr;Parent=Msa0875150-mRNA-1 |
chr6_1 | CDS | 11329764 | 11330577 | 11329764 | ID=Msa0875150-mRNA-1:cds;Parent=Msa0875150-mRNA-1 |
chr6_1 | CDS | 11330884 | 11330949 | 11330884 | ID=Msa0875150-mRNA-1:cds;Parent=Msa0875150-mRNA-1 |
chr6_1 | CDS | 11335294 | 11335464 | 11335294 | ID=Msa0875150-mRNA-1:cds;Parent=Msa0875150-mRNA-1 |
chr6_1 | CDS | 11335555 | 11335988 | 11335555 | ID=Msa0875150-mRNA-1:cds;Parent=Msa0875150-mRNA-1 |
chr6_1 | CDS | 11341520 | 11342122 | 11341520 | ID=Msa0875150-mRNA-1:cds;Parent=Msa0875150-mRNA-1 |
chr6_1 | three_prime_UTR | 11342123 | 11342208 | 11342123 | ID=Msa0875150-mRNA-1:three_prime_utr;Parent=Msa0875150-mRNA-1 |
Gene Sequence |
Protein sequence |