Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0877160 | XP_024641380.1 | 85.049 | 816 | 18 | 4 | 1 | 712 | 13 | 828 | 0.0 | 1402 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0877160 | sp|Q8VYF9|SRGT1_ARATH | 57.659 | 803 | 208 | 10 | 8 | 700 | 21 | 801 | 0.0 | 925 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0877160 | A0A396HDB0 | 85.049 | 816 | 18 | 4 | 1 | 712 | 13 | 828 | 0.0 | 1402 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0306400 | Msa0877160 | 0.947802 | 3.306656e-106 | -8.615850e-47 |
| Msa0877160 | Msa0942380 | 0.902672 | 7.632030e-79 | -8.615850e-47 |
| Msa0877160 | Msa0942390 | 0.928300 | 3.506803e-92 | -8.615850e-47 |
| Msa0877160 | Msa1043110 | 0.925295 | 2.225549e-90 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0877160 | MtrunA17_Chr6g0458451 | 85.049 | 816 | 18 | 4 | 1 | 712 | 13 | 828 | 0.0 | 1402 |
| Msa0877160 | MtrunA17_Chr7g0228921 | 62.500 | 800 | 181 | 8 | 1 | 695 | 13 | 798 | 0.0 | 1010 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0877160 | AT3G01720.1 | 57.659 | 803 | 208 | 10 | 8 | 700 | 21 | 801 | 0.0 | 925 |
Find 191 sgRNAs with CRISPR-Local
Find 594 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAAGGTTGTGACAATATTT+TGG | 0.175665 | 6_1:-15894871 | Msa0877160:CDS |
| ATCCGGTGGGTCTGGGAATT+TGG | 0.179408 | 6_1:+15890221 | None:intergenic |
| CCAAGTTCCCAAGGTAAAAT+TGG | 0.180353 | 6_1:+15895444 | None:intergenic |
| GTAGCAGGATTCACATATTT+TGG | 0.184669 | 6_1:+15893982 | None:intergenic |
| TACCAAGTTCTTTCAGGTTT+TGG | 0.193793 | 6_1:-15889903 | Msa0877160:CDS |
| GAATTTCAAGTGCTTCATTT+AGG | 0.208159 | 6_1:+15890127 | None:intergenic |
| AATTACCAATCTCCTGTTAA+TGG | 0.215038 | 6_1:+15893697 | None:intergenic |
| AGGCCTGTTGCAGCATATTA+TGG | 0.237439 | 6_1:-15895408 | Msa0877160:CDS |
| ATGAGATACCAAGTTCTTTC+AGG | 0.238205 | 6_1:-15889909 | Msa0877160:CDS |
| TTGCATGCCAGCTACCTTAT+TGG | 0.244694 | 6_1:-15892486 | Msa0877160:intron |
| GCTGCAATGACGAGGATTTA+AGG | 0.256840 | 6_1:-15893777 | Msa0877160:CDS |
| CTACCCCTGCAAACTCAAAT+TGG | 0.268189 | 6_1:-15889408 | Msa0877160:three_prime_UTR |
| CGACAAAGTTGGCGGGCTTT+TGG | 0.279044 | 6_1:-15894817 | Msa0877160:CDS |
| AACTCTTGATCAAGCTAATA+AGG | 0.288432 | 6_1:-15890193 | Msa0877160:CDS |
| ACTTGGCATACAAACCTCTT+TGG | 0.295551 | 6_1:+15894320 | None:intergenic |
| TTGGGTTGATGAATAGTTAT+AGG | 0.296552 | 6_1:-15897796 | Msa0877160:CDS |
| AACATAACTGGTGACATATA+CGG | 0.297840 | 6_1:-15894705 | Msa0877160:CDS |
| GAAGAGAAGAAGAATTATAA+AGG | 0.299151 | 6_1:-15897725 | Msa0877160:CDS |
| GCCATAGCATAGCAAATTTC+CGG | 0.300279 | 6_1:+15892373 | None:intergenic |
| AATGTCACAATTACTTTGAT+TGG | 0.302983 | 6_1:-15897826 | Msa0877160:CDS |
| GACCAGTTCCCTACACTAAA+TGG | 0.303871 | 6_1:+15894417 | None:intergenic |
| GTTGAGGGATCCGGTGGGTC+TGG | 0.314253 | 6_1:+15890213 | None:intergenic |
| AATTTCAAGTGCTTCATTTA+GGG | 0.316816 | 6_1:+15890128 | None:intergenic |
| AAAATCCAATTTGAGTTTGC+AGG | 0.326394 | 6_1:+15889403 | None:intergenic |
| AGTAACCTTGTAATATTTCC+AGG | 0.327180 | 6_1:+15893802 | None:intergenic |
| TCTTTGGGATAAGGAGGTTC+TGG | 0.330835 | 6_1:+15894336 | None:intergenic |
| TGAGATTCAGTGTTGGGAAT+TGG | 0.334660 | 6_1:-15890296 | Msa0877160:CDS |
| CTTGGCATACAAACCTCTTT+GGG | 0.352329 | 6_1:+15894321 | None:intergenic |
| GAGATGTATGGATACTCTTT+TGG | 0.352878 | 6_1:-15894666 | Msa0877160:CDS |
| GCAGCTGGTTTATTAATTGC+TGG | 0.357175 | 6_1:+15892997 | None:intergenic |
| CAACTAAGAAGCCTTGTAAT+AGG | 0.364190 | 6_1:+15897755 | None:intergenic |
| CTATATTTGACGTTCGGTTC+AGG | 0.370561 | 6_1:+15890336 | None:intergenic |
| AATTTGAACTCCTTCTCTTA+AGG | 0.373154 | 6_1:+15889315 | None:intergenic |
| GACAAACCATTCAGAGGAAT+TGG | 0.375531 | 6_1:-15889971 | Msa0877160:CDS |
| AACCAGCTGCAGTTCTTCAT+TGG | 0.391693 | 6_1:-15892984 | Msa0877160:CDS |
| CCAACTTTGTCGCACAGCTC+TGG | 0.400653 | 6_1:+15894828 | None:intergenic |
| AATGCACACCATACTTTGAT+TGG | 0.401211 | 6_1:-15893867 | Msa0877160:CDS |
| GTTCGTTGTCACAACCAATA+AGG | 0.401734 | 6_1:+15892472 | None:intergenic |
| AAGCATGCAATCAGGATTCA+TGG | 0.403064 | 6_1:-15889767 | Msa0877160:CDS |
| ATGAGTCGACATCCATTAAC+AGG | 0.404518 | 6_1:-15893709 | Msa0877160:CDS |
| CACTTGCCAATTCCTCTGAA+TGG | 0.410444 | 6_1:+15889965 | None:intergenic |
| ATGGATTGAGATTCAGTGTT+GGG | 0.410758 | 6_1:-15890302 | Msa0877160:CDS |
| TTGGGATGTCTACTCATAGA+AGG | 0.417089 | 6_1:+15897674 | None:intergenic |
| AGTCTGAGAGTTCTGAGGTT+TGG | 0.418076 | 6_1:-15889545 | Msa0877160:three_prime_UTR |
| TTGAGGGATCCGGTGGGTCT+GGG | 0.419177 | 6_1:+15890214 | None:intergenic |
| CACTGGGCGACAAACATAAC+TGG | 0.424302 | 6_1:-15894717 | Msa0877160:CDS |
| AAGAGAAGAAGAATTATAAA+GGG | 0.425177 | 6_1:-15897724 | Msa0877160:CDS |
| GGTCATATTGATATTACAAA+AGG | 0.428237 | 6_1:-15897893 | Msa0877160:CDS |
| ATTACTGAGAAATTTGTAAA+GGG | 0.437198 | 6_1:-15889520 | Msa0877160:three_prime_UTR |
| TACCCATAATATGCTGCAAC+AGG | 0.437503 | 6_1:+15895405 | None:intergenic |
| CCAACTTTGTCGCAAGCCTC+TGG | 0.438300 | 6_1:+15892426 | None:intergenic |
| TTGAATTCCCACGGTGTGAT+TGG | 0.438756 | 6_1:+15892895 | None:intergenic |
| ACAGTTTGCCAATCAAAGTA+TGG | 0.439045 | 6_1:+15893859 | None:intergenic |
| AAAACTCTATATTTGACGTT+CGG | 0.446196 | 6_1:+15890330 | None:intergenic |
| GAATTGTTTATGAATGCAAC+CGG | 0.448605 | 6_1:-15894365 | Msa0877160:CDS |
| TACTTTGATTGGCAAACTGT+TGG | 0.449037 | 6_1:-15897815 | Msa0877160:CDS |
| GAATTATAAAGGGATGCATT+TGG | 0.450756 | 6_1:-15897714 | Msa0877160:CDS |
| AGTGGAACTTCAAGGGAAAT+CGG | 0.451336 | 6_1:-15890036 | Msa0877160:CDS |
| CCCTCACGAGGGATATAACC+TGG | 0.452694 | 6_1:+15894471 | None:intergenic |
| GAGGATTTAAGGAAGTATAA+AGG | 0.453713 | 6_1:-15893766 | Msa0877160:CDS |
| CCCTCGTGAGGGAATTGAAC+CGG | 0.454874 | 6_1:-15894460 | Msa0877160:CDS |
| AACCGGTTCTTCTTCACTAC+GGG | 0.454993 | 6_1:-15894443 | Msa0877160:CDS |
| TTAGCTTGATCAAGAGTTGA+GGG | 0.463459 | 6_1:+15890198 | None:intergenic |
| AATGTGTAGGAGCCAGATCT+TGG | 0.463486 | 6_1:+15893743 | None:intergenic |
| GAAGTATAAAGGCCAAGATC+TGG | 0.467544 | 6_1:-15893755 | Msa0877160:CDS |
| CAGAAGAAAGTGGAACTTCA+AGG | 0.468519 | 6_1:-15890044 | Msa0877160:CDS |
| ATCTCATCTTTCTGAACACT+TGG | 0.468861 | 6_1:+15889925 | None:intergenic |
| GGCCTGTTGCAGCATATTAT+GGG | 0.468926 | 6_1:-15895407 | Msa0877160:intron |
| ATACAAACCTCTTTGGGATA+AGG | 0.469159 | 6_1:+15894327 | None:intergenic |
| CAAGTTCCCAAGGTAAAATT+GGG | 0.469455 | 6_1:+15895445 | None:intergenic |
| AGCCCGTAGTGAAGAAGAAC+CGG | 0.470509 | 6_1:+15894441 | None:intergenic |
| ACATAACTGGTGACATATAC+GGG | 0.471219 | 6_1:-15894704 | Msa0877160:CDS |
| GGATGAAACATCATAGTAGA+AGG | 0.471889 | 6_1:-15889795 | Msa0877160:CDS |
| TTTCTAAAACAGAAGAAGTA+CGG | 0.474428 | 6_1:-15894752 | Msa0877160:CDS |
| TTTATTGCAGGTATTACAGT+TGG | 0.474686 | 6_1:-15894169 | Msa0877160:intron |
| ATAGAAGGAACTTGAAAAGT+AGG | 0.474885 | 6_1:+15897689 | None:intergenic |
| GGATGGATCAGTGAGATGTA+TGG | 0.475233 | 6_1:-15894678 | Msa0877160:CDS |
| AGGAGAAGAAGCATGCAATC+AGG | 0.477396 | 6_1:-15889775 | Msa0877160:CDS |
| TACCATTTAGTGTAGGGAAC+TGG | 0.477535 | 6_1:-15894419 | Msa0877160:CDS |
| TGCATAAACATTATAAATGA+AGG | 0.478681 | 6_1:-15894102 | Msa0877160:CDS |
| GTCATATTGATATTACAAAA+GGG | 0.482231 | 6_1:-15897892 | Msa0877160:CDS |
| TTGATGTGGTTAACAAATGT+TGG | 0.485720 | 6_1:-15890245 | Msa0877160:CDS |
| TTCTCCGGGTCCGGGCGTAA+AGG | 0.486458 | 6_1:-15889679 | Msa0877160:three_prime_UTR |
| ACCCAAAACCTGAAAGAACT+TGG | 0.492062 | 6_1:+15889901 | None:intergenic |
| TTTCCATCATCACGATCAAC+GGG | 0.493381 | 6_1:+15893925 | None:intergenic |
| TGGGAACTTGGTGCAGAGAA+AGG | 0.495088 | 6_1:-15895432 | Msa0877160:CDS |
| AGCCAATGAAGAACTGCAGC+TGG | 0.495177 | 6_1:+15892982 | None:intergenic |
| GACATCCATTAACAGGAGAT+TGG | 0.499712 | 6_1:-15893702 | Msa0877160:intron |
| TATTACTGAGAAATTTGTAA+AGG | 0.503017 | 6_1:-15889521 | Msa0877160:three_prime_UTR |
| AGAAGAAGTACGGGAAGATA+AGG | 0.503586 | 6_1:-15894742 | Msa0877160:CDS |
| TTCCATATTGATATCAAAAG+AGG | 0.505001 | 6_1:-15890076 | Msa0877160:CDS |
| TTTCGTTTGAGTGGACAGCC+TGG | 0.507263 | 6_1:-15893820 | Msa0877160:CDS |
| AAACTCGCTCACCATGATGA+TGG | 0.507418 | 6_1:-15894387 | Msa0877160:CDS |
| GATGAGAAAACAGAAGAAAG+TGG | 0.515505 | 6_1:-15890054 | Msa0877160:CDS |
| TTCTAAAACAGAAGAAGTAC+GGG | 0.516719 | 6_1:-15894751 | Msa0877160:CDS |
| TATTACAAAAGGGGCAAAGA+AGG | 0.516819 | 6_1:-15897882 | Msa0877160:CDS |
| TTCGGTTCAGGAACATATCC+CGG | 0.517083 | 6_1:+15890348 | None:intergenic |
| CCAGAGCTGTGCGACAAAGT+TGG | 0.519233 | 6_1:-15894828 | Msa0877160:CDS |
| ACTTTGATTGGCAAACTGTT+GGG | 0.521798 | 6_1:-15897814 | Msa0877160:CDS |
| TCCGGAAATTTGCTATGCTA+TGG | 0.523585 | 6_1:-15892374 | Msa0877160:CDS |
| TGATCAAGAGTTGAGGGATC+CGG | 0.525509 | 6_1:+15890204 | None:intergenic |
| CTCACCTTTACGCCCGGACC+CGG | 0.525557 | 6_1:+15889675 | None:intergenic |
| AAGGGGCAAAGAAGGTATCA+TGG | 0.529389 | 6_1:-15897874 | Msa0877160:CDS |
| AAATCCAATTTGAGTTTGCA+GGG | 0.529688 | 6_1:+15889404 | None:intergenic |
| CTTTCCATCATCACGATCAA+CGG | 0.532984 | 6_1:+15893924 | None:intergenic |
| CCCGGACCCGGAGAATGAAA+AGG | 0.538056 | 6_1:+15889687 | None:intergenic |
| CAATGAGATACTGATATACC+CGG | 0.538068 | 6_1:-15890367 | Msa0877160:CDS |
| TAATAAATAGTCCTCGCCTT+CGG | 0.538311 | 6_1:+15894133 | None:intergenic |
| GATGAACTCACCTTTACGCC+CGG | 0.538724 | 6_1:+15889669 | None:intergenic |
| GGCCAAATTCCCAGACCCAC+CGG | 0.542009 | 6_1:-15890223 | Msa0877160:CDS |
| GGAATTGGCAAGTGTTCAGA+AGG | 0.542493 | 6_1:-15889956 | Msa0877160:CDS |
| TTCTCTGCACCAAGTTCCCA+AGG | 0.542674 | 6_1:+15895435 | None:intergenic |
| ATGGTTTGTCACGACACGAT+TGG | 0.543260 | 6_1:+15889984 | None:intergenic |
| AGCTGTGCGACAAAGTTGGC+GGG | 0.543694 | 6_1:-15894824 | Msa0877160:CDS |
| TGATGTGGTTAACAAATGTT+GGG | 0.543907 | 6_1:-15890244 | Msa0877160:CDS |
| CATAAACAATTCCATCATCA+TGG | 0.544004 | 6_1:+15894376 | None:intergenic |
| TACTGAATCAATACTTGCAT+CGG | 0.544833 | 6_1:+15890008 | None:intergenic |
| CCAGAGGCTTGCGACAAAGT+TGG | 0.545670 | 6_1:-15892426 | Msa0877160:CDS |
| GAGCTGTGCGACAAAGTTGG+CGG | 0.546257 | 6_1:-15894825 | Msa0877160:CDS |
| TCGGTTCAGGAACATATCCC+GGG | 0.548133 | 6_1:+15890349 | None:intergenic |
| AGAACCTCCTTATCCCAAAG+AGG | 0.550034 | 6_1:-15894334 | Msa0877160:intron |
| CAATTTGAGTTTGCAGGGGT+AGG | 0.556044 | 6_1:+15889409 | None:intergenic |
| AGAAGGAGTTCAAATTTCAT+CGG | 0.556967 | 6_1:-15889308 | Msa0877160:three_prime_UTR |
| TTTGACTTGACCTTAAGAGA+AGG | 0.557686 | 6_1:-15889325 | Msa0877160:three_prime_UTR |
| AACTTGGTGCAGAGAAAGGA+AGG | 0.557758 | 6_1:-15895428 | Msa0877160:CDS |
| AACAACCTGGTCCTATTACA+AGG | 0.558589 | 6_1:-15897766 | Msa0877160:CDS |
| AGCAATGGACGCGACCGGCA+CGG | 0.562849 | 6_1:-15889742 | Msa0877160:CDS |
| TTATGCATATAGATGATCTC+CGG | 0.563181 | 6_1:-15892392 | Msa0877160:CDS |
| GGAGCTTCGACAAAGCAGAC+TGG | 0.563412 | 6_1:-15890275 | Msa0877160:CDS |
| GTGACATATACGGGAAAGGA+TGG | 0.565093 | 6_1:-15894695 | Msa0877160:CDS |
| TGGAAAGCAATGGACGCGAC+CGG | 0.565743 | 6_1:-15889747 | Msa0877160:CDS |
| CTACTACAGCATGGAGCGAA+TGG | 0.567967 | 6_1:-15894075 | Msa0877160:CDS |
| GAACCGGTTCTTCTTCACTA+CGG | 0.568198 | 6_1:-15894444 | Msa0877160:CDS |
| AGAAGAAAGTGGAACTTCAA+GGG | 0.569929 | 6_1:-15890043 | Msa0877160:CDS |
| TACTTTGATTGGCAAACTGT+AGG | 0.571418 | 6_1:-15893856 | Msa0877160:CDS |
| CAAACCTCTTTGGGATAAGG+AGG | 0.571588 | 6_1:+15894330 | None:intergenic |
| ACGGGCTACCATTTAGTGTA+GGG | 0.573227 | 6_1:-15894425 | Msa0877160:CDS |
| ATTAGCTTGATCAAGAGTTG+AGG | 0.583296 | 6_1:+15890197 | None:intergenic |
| TATGGATTGAGATTCAGTGT+TGG | 0.586229 | 6_1:-15890303 | Msa0877160:CDS |
| TACGGGAAGATAAGGAACAC+TGG | 0.590462 | 6_1:-15894734 | Msa0877160:CDS |
| ATACAAGATTTAATTGTCGT+AGG | 0.590842 | 6_1:+15889380 | None:intergenic |
| CTTTGTCGCAAGCCTCTGGA+TGG | 0.593116 | 6_1:+15892430 | None:intergenic |
| GAGGCTTGCGACAAAGTTGG+TGG | 0.593292 | 6_1:-15892423 | Msa0877160:CDS |
| TGCTATGCAGGGATCGCACA+AGG | 0.593647 | 6_1:-15889633 | Msa0877160:three_prime_UTR |
| AAGGAGGTTCTGGAAAGAGC+CGG | 0.595528 | 6_1:+15894346 | None:intergenic |
| AGAAGCCTTGTAATAGGACC+AGG | 0.600804 | 6_1:+15897761 | None:intergenic |
| AATCAACATCACGGCCGTGC+CGG | 0.603120 | 6_1:+15889728 | None:intergenic |
| TCAGGATTCATGGAAAGCAA+TGG | 0.603546 | 6_1:-15889757 | Msa0877160:CDS |
| TCATATTGATATTACAAAAG+GGG | 0.604366 | 6_1:-15897891 | Msa0877160:CDS |
| GTCATAGAAGACGAGGAACA+AGG | 0.606626 | 6_1:-15889816 | Msa0877160:CDS |
| ATTGGCAAGTGTTCAGAAGG+AGG | 0.606869 | 6_1:-15889953 | Msa0877160:CDS |
| AAACCTCAGAACTCTCAGAC+TGG | 0.608730 | 6_1:+15889547 | None:intergenic |
| AAGCCAGTCTGAGAGTTCTG+AGG | 0.609637 | 6_1:-15889550 | Msa0877160:three_prime_UTR |
| CCCAGGTTATATCCCTCGTG+AGG | 0.611608 | 6_1:-15894472 | Msa0877160:CDS |
| TCGAAGGTCACTGATATGAA+AGG | 0.614152 | 6_1:+15894794 | None:intergenic |
| TCAAGAGTTGAGGGATCCGG+TGG | 0.615744 | 6_1:+15890207 | None:intergenic |
| CCCAAGGTAAAATTGGGCCA+CGG | 0.615795 | 6_1:+15895451 | None:intergenic |
| CTTGTTCACAGATAGGACTT+CGG | 0.617243 | 6_1:-15894524 | Msa0877160:intron |
| GAAGGTCTTCTACTACAGCA+TGG | 0.622146 | 6_1:-15894084 | Msa0877160:CDS |
| ATGGTTGCCCTAAGCCAGCA+TGG | 0.624220 | 6_1:-15894056 | Msa0877160:CDS |
| TACGGGCTACCATTTAGTGT+AGG | 0.626647 | 6_1:-15894426 | Msa0877160:CDS |
| ACTGGTGACATATACGGGAA+AGG | 0.631175 | 6_1:-15894699 | Msa0877160:CDS |
| TATAGGAAAGCTAAACAACC+TGG | 0.631459 | 6_1:-15897779 | Msa0877160:CDS |
| GACAGCCTGGAAATATTACA+AGG | 0.634109 | 6_1:-15893807 | Msa0877160:CDS |
| GATAACTTGATGCTCTACCC+AGG | 0.634601 | 6_1:-15894489 | Msa0877160:CDS |
| ATCAATATGGAATCAGCACT+AGG | 0.635467 | 6_1:+15890087 | None:intergenic |
| AATGGATGTCGACTCATCGA+GGG | 0.640382 | 6_1:+15893715 | None:intergenic |
| ACGGGAAGATAAGGAACACT+GGG | 0.640874 | 6_1:-15894733 | Msa0877160:CDS |
| GACATGCTTAGCATAGAATG+TGG | 0.641341 | 6_1:-15890156 | Msa0877160:CDS |
| ACCGGTTCAATTCCCTCACG+AGG | 0.646082 | 6_1:+15894459 | None:intergenic |
| TTGTTTACAAATCAACATCA+CGG | 0.647518 | 6_1:+15889719 | None:intergenic |
| CCAGGTTATATCCCTCGTGA+GGG | 0.652167 | 6_1:-15894471 | Msa0877160:CDS |
| TGGAACTTGACGCTAACCGA+AGG | 0.659239 | 6_1:-15894149 | Msa0877160:CDS |
| ATCGAGGGAACATAATGTGT+AGG | 0.661006 | 6_1:+15893730 | None:intergenic |
| GTTACTGAGCTGCAATGACG+AGG | 0.661450 | 6_1:-15893785 | Msa0877160:CDS |
| TAATGGATGTCGACTCATCG+AGG | 0.663562 | 6_1:+15893714 | None:intergenic |
| GACGCAGACATGATTATCCG+TGG | 0.665609 | 6_1:-15895468 | Msa0877160:CDS |
| CTTGACGCTAACCGAAGGCG+AGG | 0.669541 | 6_1:-15894144 | Msa0877160:CDS |
| TGTCGTGACAAACCATTCAG+AGG | 0.670388 | 6_1:-15889977 | Msa0877160:CDS |
| CGACAAAGCAGACTGGCGAG+AGG | 0.681943 | 6_1:-15890268 | Msa0877160:CDS |
| ATGGCTGCATAAAACAGAGG+AGG | 0.684775 | 6_1:-15892355 | Msa0877160:intron |
| CCTCACGAGGGATATAACCT+GGG | 0.688017 | 6_1:+15894472 | None:intergenic |
| AATGAGATACTGATATACCC+GGG | 0.688331 | 6_1:-15890366 | Msa0877160:CDS |
| GATGCTGATATGATCATGAG+AGG | 0.690513 | 6_1:-15892919 | Msa0877160:CDS |
| TGTTCGGGTCATAGAAGACG+AGG | 0.693244 | 6_1:-15889823 | Msa0877160:CDS |
| CAAGAGTTGAGGGATCCGGT+GGG | 0.697089 | 6_1:+15890208 | None:intergenic |
| GCTATGGCTGCATAAAACAG+AGG | 0.699820 | 6_1:-15892358 | Msa0877160:CDS |
| AGACTGGCGAGAGGTTGATG+TGG | 0.700331 | 6_1:-15890259 | Msa0877160:CDS |
| CCGGTTCAATTCCCTCACGA+GGG | 0.704114 | 6_1:+15894460 | None:intergenic |
| AATCCAATTTGAGTTTGCAG+GGG | 0.706048 | 6_1:+15889405 | None:intergenic |
| ATTACACACTAGCCATCCAG+AGG | 0.725347 | 6_1:-15892442 | Msa0877160:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTAGTTTTGATTTTTT+AGG | - | chr6_1:15889727-15889746 | Msa0877160:CDS | 10.0% |
| !! | ATTAAAAAAAAATGATTTAG+AGG | + | chr6_1:15893857-15893876 | None:intergenic | 10.0% |
| !!! | TATTTTTCTTTTCTAAATTA+AGG | + | chr6_1:15895505-15895524 | None:intergenic | 10.0% |
| !! | CTATTTAATGATAAAAAAAA+GGG | + | chr6_1:15896572-15896591 | None:intergenic | 10.0% |
| !! | ACTATTTAATGATAAAAAAA+AGG | + | chr6_1:15896573-15896592 | None:intergenic | 10.0% |
| !!! | CTTTTTTTGTTTGTTATTTT+TGG | - | chr6_1:15889989-15890008 | Msa0877160:CDS | 15.0% |
| !! | TCTATGTAATTACAATAAAT+AGG | - | chr6_1:15890489-15890508 | Msa0877160:intron | 15.0% |
| !! | CTATGTAATTACAATAAATA+GGG | - | chr6_1:15890490-15890509 | Msa0877160:intron | 15.0% |
| !!! | AATTTATATTTTGCTATCTT+AGG | - | chr6_1:15890660-15890679 | Msa0877160:intron | 15.0% |
| !! | TTCAATACTATAATGTAAAT+TGG | - | chr6_1:15890975-15890994 | Msa0877160:intron | 15.0% |
| !! | TCAATACTATAATGTAAATT+GGG | - | chr6_1:15890976-15890995 | Msa0877160:intron | 15.0% |
| !! | AAATCCTTGTAAATAAATTA+TGG | - | chr6_1:15891045-15891064 | Msa0877160:intron | 15.0% |
| !!! | TTTGACTTTATTTTATCTTT+TGG | + | chr6_1:15891908-15891927 | None:intergenic | 15.0% |
| !!! | GGTTTTGTTAAAATAAAAAA+TGG | - | chr6_1:15892115-15892134 | Msa0877160:intron | 15.0% |
| !!! | TTTAAAAAGTAAATCTTTTG+CGG | - | chr6_1:15893132-15893151 | Msa0877160:intron | 15.0% |
| !!! | AAAATCATTTTCTTAAGAAA+AGG | + | chr6_1:15893789-15893808 | None:intergenic | 15.0% |
| !!! | TAAGAAAATGATTTTCATTA+TGG | - | chr6_1:15893794-15893813 | Msa0877160:CDS | 15.0% |
| !! | AAATGATCATAATCATAAAT+TGG | - | chr6_1:15895745-15895764 | Msa0877160:intron | 15.0% |
| !!! | AAATATAGAGTTTTTCATTA+TGG | - | chr6_1:15896827-15896846 | Msa0877160:intron | 15.0% |
| !!! | TTTTGTATCTAAAAATCATA+AGG | - | chr6_1:15897687-15897706 | Msa0877160:CDS | 15.0% |
| !! | GTCATATTGATATTACAAAA+GGG | - | chr6_1:15889256-15889275 | Msa0877160:three_prime_UTR | 20.0% |
| !! | TCATATTGATATTACAAAAG+GGG | - | chr6_1:15889257-15889276 | Msa0877160:three_prime_UTR | 20.0% |
| !! | AAGAGAAGAAGAATTATAAA+GGG | - | chr6_1:15889424-15889443 | Msa0877160:three_prime_UTR | 20.0% |
| !! | TTCATTTATTATATGTGTCT+AGG | - | chr6_1:15889613-15889632 | Msa0877160:three_prime_UTR | 20.0% |
| !! | TATTTAAAGAGATGTTAATG+TGG | - | chr6_1:15889798-15889817 | Msa0877160:CDS | 20.0% |
| !! | CAAATCTAGTACAAAATTTA+AGG | + | chr6_1:15890421-15890440 | None:intergenic | 20.0% |
| !! | GGCTAAATATATTGTAAATT+GGG | - | chr6_1:15890451-15890470 | Msa0877160:intron | 20.0% |
| !! | ATAATTGAGAAAATAGAAGT+TGG | + | chr6_1:15890558-15890577 | None:intergenic | 20.0% |
| !! | TTAAAATGTATGTGCAAATA+TGG | - | chr6_1:15890884-15890903 | Msa0877160:intron | 20.0% |
| !! | AGAACCATAATTTATTTACA+AGG | + | chr6_1:15891052-15891071 | None:intergenic | 20.0% |
| !!! | TTTTTGTTTGTGTAGTATTT+TGG | - | chr6_1:15891261-15891280 | Msa0877160:intron | 20.0% |
| !!! | AGCTTTATATACAAACTTTT+TGG | + | chr6_1:15891518-15891537 | None:intergenic | 20.0% |
| !!! | ATGTTCAGTTTTTAATTTTC+TGG | - | chr6_1:15892207-15892226 | Msa0877160:intron | 20.0% |
| !! | ATAATGAACGTGTTAATTTA+AGG | + | chr6_1:15892530-15892549 | None:intergenic | 20.0% |
| !!! | AGAAAAATTTCTCCATTTTT+TGG | - | chr6_1:15892881-15892900 | Msa0877160:intron | 20.0% |
| !! | AGTATATATAGACCAAAAAA+TGG | + | chr6_1:15892896-15892915 | None:intergenic | 20.0% |
| !! | AATATATATGCACAGAAATA+TGG | - | chr6_1:15892917-15892936 | Msa0877160:CDS | 20.0% |
| !! | TGCATAAACATTATAAATGA+AGG | - | chr6_1:15893046-15893065 | Msa0877160:intron | 20.0% |
| !! | TAAGAAAAATTGTAACATAC+AGG | + | chr6_1:15893629-15893648 | None:intergenic | 20.0% |
| !! | TAATGATGCTACAAAATTTA+AGG | + | chr6_1:15893894-15893913 | None:intergenic | 20.0% |
| !!! | AGATATCTTTAAGCTAATTT+TGG | - | chr6_1:15893923-15893942 | Msa0877160:intron | 20.0% |
| !!! | TTTTTAGCATATAGTCAAAA+TGG | + | chr6_1:15894098-15894117 | None:intergenic | 20.0% |
| !! | TGGTTTAAATTAACATTAAC+AGG | + | chr6_1:15894349-15894368 | None:intergenic | 20.0% |
| !!! | TAAAATGTTTCTAAATCTCA+AGG | + | chr6_1:15895476-15895495 | None:intergenic | 20.0% |
| !! | TATTACTGAGAAATTTGTAA+AGG | - | chr6_1:15897627-15897646 | Msa0877160:intron | 20.0% |
| !! | ATTACTGAGAAATTTGTAAA+GGG | - | chr6_1:15897628-15897647 | Msa0877160:intron | 20.0% |
| ! | GGTCATATTGATATTACAAA+AGG | - | chr6_1:15889255-15889274 | Msa0877160:three_prime_UTR | 25.0% |
| ! | AATGTCACAATTACTTTGAT+TGG | - | chr6_1:15889322-15889341 | Msa0877160:three_prime_UTR | 25.0% |
| ! | GAAGAGAAGAAGAATTATAA+AGG | - | chr6_1:15889423-15889442 | Msa0877160:three_prime_UTR | 25.0% |
| ! | TTGAATTGTGAAATGTAGAT+TGG | - | chr6_1:15889763-15889782 | Msa0877160:CDS | 25.0% |
| !!! | AATTTTAACGTGGTTTACTT+AGG | - | chr6_1:15889867-15889886 | Msa0877160:CDS | 25.0% |
| ! | ATATGTGAAGTGATATTGTT+AGG | - | chr6_1:15889909-15889928 | Msa0877160:CDS | 25.0% |
| !!! | GATTTTAATGTGATTGACTT+TGG | - | chr6_1:15890095-15890114 | Msa0877160:CDS | 25.0% |
| !!! | TCAAGAATGTGACATTTTTT+TGG | + | chr6_1:15890291-15890310 | None:intergenic | 25.0% |
| !! | TACTAGATTTGTGTTTTCAA+CGG | - | chr6_1:15890430-15890449 | Msa0877160:intron | 25.0% |
| ! | CGGCTAAATATATTGTAAAT+TGG | - | chr6_1:15890450-15890469 | Msa0877160:intron | 25.0% |
| !!! | TTTTTGAGTGTTTTCAATGT+TGG | - | chr6_1:15890741-15890760 | Msa0877160:intron | 25.0% |
| ! | ATCGTAATTACATAGAATCA+GGG | + | chr6_1:15891010-15891029 | None:intergenic | 25.0% |
| ! | TCTATGTAATTACGATCATA+AGG | - | chr6_1:15891014-15891033 | Msa0877160:intron | 25.0% |
| ! | CTATGTAATTACGATCATAA+GGG | - | chr6_1:15891015-15891034 | Msa0877160:intron | 25.0% |
| ! | TTGTTTGTGTAGTATTTCAT+AGG | - | chr6_1:15891264-15891283 | Msa0877160:intron | 25.0% |
| !! | GAAGCATCATATTTGTTAAA+GGG | + | chr6_1:15891491-15891510 | None:intergenic | 25.0% |
| !! | TGAAGCATCATATTTGTTAA+AGG | + | chr6_1:15891492-15891511 | None:intergenic | 25.0% |
| ! | AATTTCTTACTCGTTTCTTA+CGG | - | chr6_1:15891772-15891791 | Msa0877160:intron | 25.0% |
| !! | TTTTACTGAATATCACTCTT+TGG | + | chr6_1:15891801-15891820 | None:intergenic | 25.0% |
| ! | GTAAGAACTAATAGCATAAA+CGG | - | chr6_1:15891845-15891864 | Msa0877160:intron | 25.0% |
| ! | ATAAACGGTTATCATATAAG+TGG | - | chr6_1:15891860-15891879 | Msa0877160:intron | 25.0% |
| !! | AAAAGGTTGTGACAATATTT+TGG | - | chr6_1:15892277-15892296 | Msa0877160:intron | 25.0% |
| !!! | TTTCTAAAACAGAAGAAGTA+CGG | - | chr6_1:15892396-15892415 | Msa0877160:CDS | 25.0% |
| ! | TTTCATGCTATAAGTATACT+TGG | + | chr6_1:15892848-15892867 | None:intergenic | 25.0% |
| ! | TAACAAACGAATGTAAAACT+CGG | + | chr6_1:15893661-15893680 | None:intergenic | 25.0% |
| ! | AACAAACACATAATAGTTTC+TGG | - | chr6_1:15893819-15893838 | Msa0877160:CDS | 25.0% |
| ! | AATTGTATAATAGTTTCGCT+TGG | - | chr6_1:15894038-15894057 | Msa0877160:CDS | 25.0% |
| !! | AGTTCTTCTGTTTTCATTTT+AGG | - | chr6_1:15894125-15894144 | Msa0877160:CDS | 25.0% |
| ! | CATTATGCAAGAAATATAAC+AGG | - | chr6_1:15894833-15894852 | Msa0877160:CDS | 25.0% |
| ! | AACAAAATAGAGAAAAACAG+AGG | + | chr6_1:15895108-15895127 | None:intergenic | 25.0% |
| !! | TTTTTCTCTATTTTGTTGCT+TGG | - | chr6_1:15895111-15895130 | Msa0877160:intron | 25.0% |
| ! | AGATAATTGAGGAAAAACAA+AGG | + | chr6_1:15895211-15895230 | None:intergenic | 25.0% |
| ! | AAATAGATAGAGAAAACAGA+GGG | + | chr6_1:15895262-15895281 | None:intergenic | 25.0% |
| ! | TAAACATATTAGGGTATGTT+TGG | + | chr6_1:15895563-15895582 | None:intergenic | 25.0% |
| ! | ACAGAGTGATAAACATATTA+GGG | + | chr6_1:15895572-15895591 | None:intergenic | 25.0% |
| ! | TACAGAGTGATAAACATATT+AGG | + | chr6_1:15895573-15895592 | None:intergenic | 25.0% |
| ! | TTCTATCTCCATATTAAGAA+CGG | - | chr6_1:15896004-15896023 | Msa0877160:intron | 25.0% |
| ! | ATTGTTGAATTCCTAATACT+AGG | + | chr6_1:15896544-15896563 | None:intergenic | 25.0% |
| ! | AAAACTCTATATTTGACGTT+CGG | + | chr6_1:15896821-15896840 | None:intergenic | 25.0% |
| !! | AATTTCAAGTGCTTCATTTA+GGG | + | chr6_1:15897023-15897042 | None:intergenic | 25.0% |
| ! | TTCCATATTGATATCAAAAG+AGG | - | chr6_1:15897072-15897091 | Msa0877160:intron | 25.0% |
| !! | ATCCTCTTTTGATATCAATA+TGG | + | chr6_1:15897077-15897096 | None:intergenic | 25.0% |
| ! | TTGTTTACAAATCAACATCA+CGG | + | chr6_1:15897432-15897451 | None:intergenic | 25.0% |
| ! | ATACAAGATTTAATTGTCGT+AGG | + | chr6_1:15897771-15897790 | None:intergenic | 25.0% |
| !! | TTGGGTTGATGAATAGTTAT+AGG | - | chr6_1:15889352-15889371 | Msa0877160:three_prime_UTR | 30.0% |
| GAATTATAAAGGGATGCATT+TGG | - | chr6_1:15889434-15889453 | Msa0877160:three_prime_UTR | 30.0% | |
| ATAGAAGGAACTTGAAAAGT+AGG | + | chr6_1:15889462-15889481 | None:intergenic | 30.0% | |
| ! | ATTTACATTGAAAGCGTGTT+CGG | - | chr6_1:15889550-15889569 | Msa0877160:three_prime_UTR | 30.0% |
| !! | TGACTTTAGTAGATTGGTTT+CGG | - | chr6_1:15889822-15889841 | Msa0877160:CDS | 30.0% |
| !! | AAGTGCTGTTAATTTTAACG+TGG | - | chr6_1:15889857-15889876 | Msa0877160:CDS | 30.0% |
| ATTGTTAGGTATAGACACTT+CGG | - | chr6_1:15889923-15889942 | Msa0877160:CDS | 30.0% | |
| TTTAACCATTGACAAGTACA+TGG | + | chr6_1:15890018-15890037 | None:intergenic | 30.0% | |
| AGATGTGAAGTGTATTAATG+TGG | - | chr6_1:15890142-15890161 | Msa0877160:CDS | 30.0% | |
| TTGGATAAGCAAATGTTAGT+GGG | + | chr6_1:15890272-15890291 | None:intergenic | 30.0% | |
| TTTGGATAAGCAAATGTTAG+TGG | + | chr6_1:15890273-15890292 | None:intergenic | 30.0% | |
| !!! | CTTAGGAATGTTTTTGAGTT+CGG | - | chr6_1:15890677-15890696 | Msa0877160:intron | 30.0% |
| ACTGTGAAATGATGTTAATG+AGG | - | chr6_1:15890700-15890719 | Msa0877160:intron | 30.0% | |
| !! | GTGTTTTCAATGTTGGTTAT+TGG | - | chr6_1:15890748-15890767 | Msa0877160:intron | 30.0% |
| GATCGTAATTACATAGAATC+AGG | + | chr6_1:15891011-15891030 | None:intergenic | 30.0% | |
| CTAAACTATCAGTGTTACAT+AGG | + | chr6_1:15891135-15891154 | None:intergenic | 30.0% | |
| CACTGATAGTTTAGATTTGA+TGG | - | chr6_1:15891141-15891160 | Msa0877160:intron | 30.0% | |
| !! | TTAAAGGGACATTTTAAGTG+GGG | + | chr6_1:15891476-15891495 | None:intergenic | 30.0% |
| !! | GTTAAAGGGACATTTTAAGT+GGG | + | chr6_1:15891477-15891496 | None:intergenic | 30.0% |
| ! | TGTTAAAGGGACATTTTAAG+TGG | + | chr6_1:15891478-15891497 | None:intergenic | 30.0% |
| ! | ATTTCTCATTTTGCTCTCTT+GGG | + | chr6_1:15891551-15891570 | None:intergenic | 30.0% |
| ! | TATTTCTCATTTTGCTCTCT+TGG | + | chr6_1:15891552-15891571 | None:intergenic | 30.0% |
| ! | TAAATTTTTGTCCTCTATGC+AGG | - | chr6_1:15891570-15891589 | Msa0877160:intron | 30.0% |
| AGGATGCAAAAAATGTTGAT+TGG | - | chr6_1:15891645-15891664 | Msa0877160:intron | 30.0% | |
| ! | GGATGCAAAAAATGTTGATT+GGG | - | chr6_1:15891646-15891665 | Msa0877160:intron | 30.0% |
| AGTCAAACTCTTCTCATATA+TGG | - | chr6_1:15891921-15891940 | Msa0877160:intron | 30.0% | |
| AGTAAGCTGAAAACAACTTA+TGG | - | chr6_1:15891984-15892003 | Msa0877160:intron | 30.0% | |
| !! | TTGCTTTGAAGTTATGAAAC+TGG | - | chr6_1:15892145-15892164 | Msa0877160:intron | 30.0% |
| !! | TGCTTTGAAGTTATGAAACT+GGG | - | chr6_1:15892146-15892165 | Msa0877160:intron | 30.0% |
| AAGTACCTGGACAAAAAAAT+TGG | + | chr6_1:15892257-15892276 | None:intergenic | 30.0% | |
| ! | TTTTTGTCCAGGTACTTAAA+AGG | - | chr6_1:15892260-15892279 | Msa0877160:intron | 30.0% |
| !! | TTCTAAAACAGAAGAAGTAC+GGG | - | chr6_1:15892397-15892416 | Msa0877160:CDS | 30.0% |
| AACATAACTGGTGACATATA+CGG | - | chr6_1:15892443-15892462 | Msa0877160:CDS | 30.0% | |
| GAACAAGAGAGAAAACAAAA+GGG | + | chr6_1:15892611-15892630 | None:intergenic | 30.0% | |
| TGAACAAGAGAGAAAACAAA+AGG | + | chr6_1:15892612-15892631 | None:intergenic | 30.0% | |
| CATAAACAATTCCATCATCA+TGG | + | chr6_1:15892775-15892794 | None:intergenic | 30.0% | |
| GAATTGTTTATGAATGCAAC+CGG | - | chr6_1:15892783-15892802 | Msa0877160:intron | 30.0% | |
| ! | TTTCTAAGTTTTGCTGATGT+TGG | - | chr6_1:15892949-15892968 | Msa0877160:CDS | 30.0% |
| ! | GTTGGAAATCATTTTATTGC+AGG | - | chr6_1:15892967-15892986 | Msa0877160:CDS | 30.0% |
| TTTATTGCAGGTATTACAGT+TGG | - | chr6_1:15892979-15892998 | Msa0877160:CDS | 30.0% | |
| !! | TCCTGCTACTTTAAAAATGA+TGG | - | chr6_1:15893180-15893199 | Msa0877160:intron | 30.0% |
| !!! | TCCATCATTTTTAAAGTAGC+AGG | + | chr6_1:15893184-15893203 | None:intergenic | 30.0% |
| ! | GAGAAAACTGTATGGATTTT+GGG | + | chr6_1:15893256-15893275 | None:intergenic | 30.0% |
| AGTAACCTTGTAATATTTCC+AGG | + | chr6_1:15893349-15893368 | None:intergenic | 30.0% | |
| ! | GAGGATTTAAGGAAGTATAA+AGG | - | chr6_1:15893382-15893401 | Msa0877160:intron | 30.0% |
| AATTACCAATCTCCTGTTAA+TGG | + | chr6_1:15893454-15893473 | None:intergenic | 30.0% | |
| AAAATCAATCATGGAAGGAA+AGG | - | chr6_1:15893595-15893614 | Msa0877160:intron | 30.0% | |
| ! | GATTTTTATCCTGTGAAAAG+TGG | + | chr6_1:15893684-15893703 | None:intergenic | 30.0% |
| TATTATACAATTTCCCACCT+CGG | + | chr6_1:15894030-15894049 | None:intergenic | 30.0% | |
| AAACCAGTGTTGTCAAATAA+TGG | - | chr6_1:15894363-15894382 | Msa0877160:CDS | 30.0% | |
| TCAAATTCCACCACATTATA+AGG | + | chr6_1:15894406-15894425 | None:intergenic | 30.0% | |
| !! | TTTGATGACTGCATTTTTCA+TGG | - | chr6_1:15894558-15894577 | Msa0877160:intron | 30.0% |
| TTATGCATATAGATGATCTC+CGG | - | chr6_1:15894756-15894775 | Msa0877160:CDS | 30.0% | |
| AGATGATAGAGGAAAAACAA+AGG | + | chr6_1:15895139-15895158 | None:intergenic | 30.0% | |
| CATCAAAACAGAGATAATTG+AGG | + | chr6_1:15895222-15895241 | None:intergenic | 30.0% | |
| !!! | ATTATCTCTGTTTTGATGCT+TGG | - | chr6_1:15895224-15895243 | Msa0877160:intron | 30.0% |
| GAAATAGATAGAGAAAACAG+AGG | + | chr6_1:15895263-15895282 | None:intergenic | 30.0% | |
| ! | TTTGGATTGAGGATTTTGAA+AGG | + | chr6_1:15895545-15895564 | None:intergenic | 30.0% |
| CTCTGTATAAAAAATTGTGC+TGG | - | chr6_1:15895622-15895641 | Msa0877160:intron | 30.0% | |
| AAACAAATGAACTGAACTCA+TGG | + | chr6_1:15895677-15895696 | None:intergenic | 30.0% | |
| AGATTACCTGAATGTTTCTT+TGG | - | chr6_1:15895947-15895966 | Msa0877160:intron | 30.0% | |
| GATTACCTGAATGTTTCTTT+GGG | - | chr6_1:15895948-15895967 | Msa0877160:intron | 30.0% | |
| TAATACCCAAAGAAACATTC+AGG | + | chr6_1:15895956-15895975 | None:intergenic | 30.0% | |
| CCATTAATCCGTTCTTAATA+TGG | + | chr6_1:15896015-15896034 | None:intergenic | 30.0% | |
| !! | CCATATTAAGAACGGATTAA+TGG | - | chr6_1:15896012-15896031 | Msa0877160:intron | 30.0% |
| GTTAGATAATGTGCAATCAA+CGG | + | chr6_1:15896097-15896116 | None:intergenic | 30.0% | |
| TTGATTGCACATTATCTAAC+TGG | - | chr6_1:15896097-15896116 | Msa0877160:intron | 30.0% | |
| !!! | CAAGGATAGTTTTGGTAAAA+TGG | + | chr6_1:15896243-15896262 | None:intergenic | 30.0% |
| GATCATCATAACCTAGTATT+AGG | - | chr6_1:15896530-15896549 | Msa0877160:intron | 30.0% | |
| ATCATGAAAGAGAAAAGCAA+AGG | + | chr6_1:15896660-15896679 | None:intergenic | 30.0% | |
| TAGTGTAGTGTAACAATTTG+TGG | + | chr6_1:15896689-15896708 | None:intergenic | 30.0% | |
| CATCAAATGAATAACATCAC+TGG | + | chr6_1:15896735-15896754 | None:intergenic | 30.0% | |
| TTGATGTGGTTAACAAATGT+TGG | - | chr6_1:15896903-15896922 | Msa0877160:intron | 30.0% | |
| TGATGTGGTTAACAAATGTT+GGG | - | chr6_1:15896904-15896923 | Msa0877160:intron | 30.0% | |
| AACTCTTGATCAAGCTAATA+AGG | - | chr6_1:15896955-15896974 | Msa0877160:intron | 30.0% | |
| ! | GAATTTCAAGTGCTTCATTT+AGG | + | chr6_1:15897024-15897043 | None:intergenic | 30.0% |
| TACTGAATCAATACTTGCAT+CGG | + | chr6_1:15897143-15897162 | None:intergenic | 30.0% | |
| !! | GTTTTGGGTGGTATTTTTAT+GGG | - | chr6_1:15897261-15897280 | Msa0877160:intron | 30.0% |
| !! | GTATTTTTATGGGCATTTTC+TGG | - | chr6_1:15897271-15897290 | Msa0877160:intron | 30.0% |
| !! | ATTTTCTGGATTCGGTTTTT+TGG | - | chr6_1:15897285-15897304 | Msa0877160:intron | 30.0% |
| !!! | AATTTTAAGACTGCTATGCA+GGG | - | chr6_1:15897504-15897523 | Msa0877160:intron | 30.0% |
| ! | AAATCCAATTTGAGTTTGCA+GGG | + | chr6_1:15897747-15897766 | None:intergenic | 30.0% |
| ! | AAAATCCAATTTGAGTTTGC+AGG | + | chr6_1:15897748-15897767 | None:intergenic | 30.0% |
| AATTTGAACTCCTTCTCTTA+AGG | + | chr6_1:15897836-15897855 | None:intergenic | 30.0% | |
| AGAAGGAGTTCAAATTTCAT+CGG | - | chr6_1:15897840-15897859 | Msa0877160:CDS | 30.0% | |
| TATTACAAAAGGGGCAAAGA+AGG | - | chr6_1:15889266-15889285 | Msa0877160:three_prime_UTR | 35.0% | |
| TACTTTGATTGGCAAACTGT+TGG | - | chr6_1:15889333-15889352 | Msa0877160:three_prime_UTR | 35.0% | |
| ACTTTGATTGGCAAACTGTT+GGG | - | chr6_1:15889334-15889353 | Msa0877160:three_prime_UTR | 35.0% | |
| TATAGGAAAGCTAAACAACC+TGG | - | chr6_1:15889369-15889388 | Msa0877160:three_prime_UTR | 35.0% | |
| ! | CAACTAAGAAGCCTTGTAAT+AGG | + | chr6_1:15889396-15889415 | None:intergenic | 35.0% |
| ! | TCTTACCAATCACCAGTTTT+GGG | + | chr6_1:15889495-15889514 | None:intergenic | 35.0% |
| ! | ATCTTACCAATCACCAGTTT+TGG | + | chr6_1:15889496-15889515 | None:intergenic | 35.0% |
| !! | GAAATGTAGATTGGTTTGTG+TGG | - | chr6_1:15889772-15889791 | Msa0877160:CDS | 35.0% |
| ! | TGTGGTTGACTTTAGTAGAT+TGG | - | chr6_1:15889816-15889835 | Msa0877160:CDS | 35.0% |
| CTTGTCAATGGTTAAATGTG+AGG | - | chr6_1:15890022-15890041 | Msa0877160:CDS | 35.0% | |
| TTAAAGCGACTTTGGTTGAT+TGG | - | chr6_1:15890050-15890069 | Msa0877160:CDS | 35.0% | |
| ! | TGTGATTGACTTTGGTAGAT+TGG | - | chr6_1:15890103-15890122 | Msa0877160:CDS | 35.0% |
| !! | AGTGGGTTATGTTAGTTTGA+AGG | + | chr6_1:15890255-15890274 | None:intergenic | 35.0% |
| !! | ATCTTTGAAACCAGCATATC+TGG | - | chr6_1:15890522-15890541 | Msa0877160:intron | 35.0% |
| TTGAATGAAACCAGATATGC+TGG | + | chr6_1:15890535-15890554 | None:intergenic | 35.0% | |
| ! | TGAGGTTGACTTTGATAGTT+TGG | - | chr6_1:15890718-15890737 | Msa0877160:intron | 35.0% |
| TGTTGTTCTTAAGCATGCTT+TGG | - | chr6_1:15890841-15890860 | Msa0877160:intron | 35.0% | |
| GTTGTTCTTAAGCATGCTTT+GGG | - | chr6_1:15890842-15890861 | Msa0877160:intron | 35.0% | |
| TTGTTCTTAAGCATGCTTTG+GGG | - | chr6_1:15890843-15890862 | Msa0877160:intron | 35.0% | |
| ! | CGGGTAATAATTTGCGAAAA+TGG | + | chr6_1:15891207-15891226 | None:intergenic | 35.0% |
| !! | TTTCTAAAATTCCAGCATGC+TGG | - | chr6_1:15891324-15891343 | Msa0877160:intron | 35.0% |
| !! | GACATTTTAAGTGGGGATAT+GGG | + | chr6_1:15891469-15891488 | None:intergenic | 35.0% |
| CAAGTTCCCAAGGTAAAATT+GGG | + | chr6_1:15891706-15891725 | None:intergenic | 35.0% | |
| !! | GGCAGTAAACAAATTTTAGC+AGG | - | chr6_1:15892078-15892097 | Msa0877160:intron | 35.0% |
| TGAAACTGGGTTAAATCTCA+TGG | - | chr6_1:15892159-15892178 | Msa0877160:intron | 35.0% | |
| !!! | ACATGCCAATTTTTTTGTCC+AGG | - | chr6_1:15892249-15892268 | Msa0877160:intron | 35.0% |
| !!! | TCTGTTTTAGAAAGCCACAA+GGG | + | chr6_1:15892389-15892408 | None:intergenic | 35.0% |
| !!! | TTCTGTTTTAGAAAGCCACA+AGG | + | chr6_1:15892390-15892409 | None:intergenic | 35.0% |
| ACATAACTGGTGACATATAC+GGG | - | chr6_1:15892444-15892463 | Msa0877160:CDS | 35.0% | |
| ! | GAGATGTATGGATACTCTTT+TGG | - | chr6_1:15892482-15892501 | Msa0877160:intron | 35.0% |
| AGAGAGAAAACAAAAGGGAA+GGG | + | chr6_1:15892606-15892625 | None:intergenic | 35.0% | |
| AAGAGAGAAAACAAAAGGGA+AGG | + | chr6_1:15892607-15892626 | None:intergenic | 35.0% | |
| TTTCTCTCTTGTTCACAGAT+AGG | - | chr6_1:15892617-15892636 | Msa0877160:intron | 35.0% | |
| !! | ATACAAACCTCTTTGGGATA+AGG | + | chr6_1:15892824-15892843 | None:intergenic | 35.0% |
| TAATAAATAGTCCTCGCCTT+CGG | + | chr6_1:15893018-15893037 | None:intergenic | 35.0% | |
| ! | GTAGCAGGATTCACATATTT+TGG | + | chr6_1:15893169-15893188 | None:intergenic | 35.0% |
| ! | GGAGAAAACTGTATGGATTT+TGG | + | chr6_1:15893257-15893276 | None:intergenic | 35.0% |
| ATTCTGTGGAGAAAACTGTA+TGG | + | chr6_1:15893264-15893283 | None:intergenic | 35.0% | |
| AATGCACACCATACTTTGAT+TGG | - | chr6_1:15893281-15893300 | Msa0877160:intron | 35.0% | |
| ACAGTTTGCCAATCAAAGTA+TGG | + | chr6_1:15889333-15889352 | None:intergenic | 35.0% | |
| TACTTTGATTGGCAAACTGT+AGG | - | chr6_1:15889333-15889352 | Msa0877160:three_prime_UTR | 35.0% | |
| CATGGATGTTTACTGTGATT+GGG | - | chr6_1:15893548-15893567 | Msa0877160:intron | 35.0% | |
| GTCACAAAATCAATCATGGA+AGG | - | chr6_1:15893590-15893609 | Msa0877160:intron | 35.0% | |
| ATTATACAATTTCCCACCTC+GGG | + | chr6_1:15894029-15894048 | None:intergenic | 35.0% | |
| GGTAAGTTCTTCTGTTTATG+TGG | - | chr6_1:15894059-15894078 | Msa0877160:CDS | 35.0% | |
| !! | TGACTTGGGTTGATGTTTAT+CGG | - | chr6_1:15894322-15894341 | Msa0877160:intron | 35.0% |
| ! | ATAAGGTTAAGGCACTACTA+AGG | + | chr6_1:15894389-15894408 | None:intergenic | 35.0% |
| AGTGCCTTAACCTTATAATG+TGG | - | chr6_1:15894393-15894412 | Msa0877160:CDS | 35.0% | |
| TCCACCACATTATAAGGTTA+AGG | + | chr6_1:15894400-15894419 | None:intergenic | 35.0% | |
| TTTCATGGTTGCAAACATAC+AGG | - | chr6_1:15894573-15894592 | Msa0877160:intron | 35.0% | |
| ACAGGAGACATATATGAATC+AGG | - | chr6_1:15894851-15894870 | Msa0877160:CDS | 35.0% | |
| CAGGAGACATATATGAATCA+GGG | - | chr6_1:15894852-15894871 | Msa0877160:CDS | 35.0% | |
| GAGATGTATGGTTACTCATT+TGG | - | chr6_1:15894884-15894903 | Msa0877160:intron | 35.0% | |
| GACAAATGGCAAAAAAACAG+AGG | + | chr6_1:15895065-15895084 | None:intergenic | 35.0% | |
| AGCAAAAAACAGAGGACAAA+TGG | + | chr6_1:15895079-15895098 | None:intergenic | 35.0% | |
| GGAAAAACAGCAAAAAACAG+AGG | + | chr6_1:15895087-15895106 | None:intergenic | 35.0% | |
| GCAATAAACAGAGATGATAG+AGG | + | chr6_1:15895150-15895169 | None:intergenic | 35.0% | |
| AGGGAAAAACAGAGGAAAAA+TGG | + | chr6_1:15895172-15895191 | None:intergenic | 35.0% | |
| AACAAAACAGGGAAAAACAG+AGG | + | chr6_1:15895180-15895199 | None:intergenic | 35.0% | |
| !! | TTTTTCCCTGTTTTGTTGCT+TGG | - | chr6_1:15895183-15895202 | Msa0877160:intron | 35.0% |
| TTTCTAAATCTCAAGGAGCA+AGG | + | chr6_1:15895469-15895488 | None:intergenic | 35.0% | |
| !! | TTGAGGATTTTGAAAGGAGA+GGG | + | chr6_1:15895539-15895558 | None:intergenic | 35.0% |
| !! | ATTGAGGATTTTGAAAGGAG+AGG | + | chr6_1:15895540-15895559 | None:intergenic | 35.0% |
| ATTAGGGTATGTTTGGATTG+AGG | + | chr6_1:15895556-15895575 | None:intergenic | 35.0% | |
| GAAACATTCAGGTAATCTCA+TGG | + | chr6_1:15895945-15895964 | None:intergenic | 35.0% | |
| CATGAAAGACAACTCAGAAT+CGG | + | chr6_1:15896041-15896060 | None:intergenic | 35.0% | |
| GGTTAAATCATTGCACTTAG+AGG | - | chr6_1:15896066-15896085 | Msa0877160:intron | 35.0% | |
| !! | GCACATTATCTAACTGGTTT+TGG | - | chr6_1:15896103-15896122 | Msa0877160:intron | 35.0% |
| ATACTGGCATTGCAATATGA+AGG | + | chr6_1:15896181-15896200 | None:intergenic | 35.0% | |
| !!! | GATAGTTTTGGTAAAATGGC+TGG | + | chr6_1:15896239-15896258 | None:intergenic | 35.0% |
| TTACCAAAACTATCCTTGCT+TGG | - | chr6_1:15896245-15896264 | Msa0877160:intron | 35.0% | |
| TACTTACTTGAGAGGCTAAT+GGG | - | chr6_1:15896395-15896414 | Msa0877160:intron | 35.0% | |
| !!! | TAATGGGGTGTTTGTTTTAG+AGG | - | chr6_1:15896411-15896430 | Msa0877160:intron | 35.0% |
| ATAGTACTTCTGCACAGTTA+AGG | - | chr6_1:15896588-15896607 | Msa0877160:intron | 35.0% | |
| TAGTACTTCTGCACAGTTAA+GGG | - | chr6_1:15896589-15896608 | Msa0877160:intron | 35.0% | |
| CAATGAGATACTGATATACC+CGG | - | chr6_1:15896781-15896800 | Msa0877160:intron | 35.0% | |
| AATGAGATACTGATATACCC+GGG | - | chr6_1:15896782-15896801 | Msa0877160:intron | 35.0% | |
| ! | TATGGATTGAGATTCAGTGT+TGG | - | chr6_1:15896845-15896864 | Msa0877160:intron | 35.0% |
| ! | ATGGATTGAGATTCAGTGTT+GGG | - | chr6_1:15896846-15896865 | Msa0877160:intron | 35.0% |
| ! | TTAGCTTGATCAAGAGTTGA+GGG | + | chr6_1:15896953-15896972 | None:intergenic | 35.0% |
| ! | ATTAGCTTGATCAAGAGTTG+AGG | + | chr6_1:15896954-15896973 | None:intergenic | 35.0% |
| ATCAATATGGAATCAGCACT+AGG | + | chr6_1:15897064-15897083 | None:intergenic | 35.0% | |
| GATGAGAAAACAGAAGAAAG+TGG | - | chr6_1:15897094-15897113 | Msa0877160:intron | 35.0% | |
| AGAAGAAAGTGGAACTTCAA+GGG | - | chr6_1:15897105-15897124 | Msa0877160:intron | 35.0% | |
| ATCTCATCTTTCTGAACACT+TGG | + | chr6_1:15897226-15897245 | None:intergenic | 35.0% | |
| ATGAGATACCAAGTTCTTTC+AGG | - | chr6_1:15897239-15897258 | Msa0877160:intron | 35.0% | |
| !!! | TACCAAGTTCTTTCAGGTTT+TGG | - | chr6_1:15897245-15897264 | Msa0877160:intron | 35.0% |
| !!! | ACCAAGTTCTTTCAGGTTTT+GGG | - | chr6_1:15897246-15897265 | Msa0877160:intron | 35.0% |
| !!! | GGTTTTGGGTGGTATTTTTA+TGG | - | chr6_1:15897260-15897279 | Msa0877160:intron | 35.0% |
| ! | TTATGGGCATTTTCTGGATT+CGG | - | chr6_1:15897277-15897296 | Msa0877160:intron | 35.0% |
| GGATGAAACATCATAGTAGA+AGG | - | chr6_1:15897353-15897372 | Msa0877160:intron | 35.0% | |
| !!! | GAATTTTAAGACTGCTATGC+AGG | - | chr6_1:15897503-15897522 | Msa0877160:intron | 35.0% |
| ! | AATCCAATTTGAGTTTGCAG+GGG | + | chr6_1:15897746-15897765 | None:intergenic | 35.0% |
| !! | TTTGACTTGACCTTAAGAGA+AGG | - | chr6_1:15897823-15897842 | Msa0877160:CDS | 35.0% |
| AACAACCTGGTCCTATTACA+AGG | - | chr6_1:15889382-15889401 | Msa0877160:three_prime_UTR | 40.0% | |
| TTGGGATGTCTACTCATAGA+AGG | + | chr6_1:15889477-15889496 | None:intergenic | 40.0% | |
| ATGAGTAGACATCCCAAAAC+TGG | - | chr6_1:15889480-15889499 | Msa0877160:three_prime_UTR | 40.0% | |
| !! | CTTTAGTAGATTGGTTTCGG+TGG | - | chr6_1:15889825-15889844 | Msa0877160:CDS | 40.0% |
| CGTGGTTTACTTAGGTAGAT+TGG | - | chr6_1:15889875-15889894 | Msa0877160:CDS | 40.0% | |
| !! | CTTAGGTAGATTGGTTTGTG+TGG | - | chr6_1:15889884-15889903 | Msa0877160:CDS | 40.0% |
| GTATAGACACTTCGGATTGA+AGG | - | chr6_1:15889931-15889950 | Msa0877160:CDS | 40.0% | |
| !! | AGGTGTTGTTAAAGCGACTT+TGG | - | chr6_1:15890042-15890061 | Msa0877160:CDS | 40.0% |
| !! | CTTTGGTTGATTGGTTTGTG+TGG | - | chr6_1:15890059-15890078 | Msa0877160:CDS | 40.0% |
| AAGTACTAACCAGGAGATCA+GGG | - | chr6_1:15890222-15890241 | Msa0877160:CDS | 40.0% | |
| AAGCAGAACAACACATCAAG+CGG | + | chr6_1:15890317-15890336 | None:intergenic | 40.0% | |
| ! | CTTGATGTGTTGTTCTGCTT+AGG | - | chr6_1:15890317-15890336 | Msa0877160:CDS | 40.0% |
| TTCTGCTTAGGCATGCTTTA+GGG | - | chr6_1:15890329-15890348 | Msa0877160:CDS | 40.0% | |
| ! | ATGAAGCACTAACACAGACA+CGG | + | chr6_1:15890598-15890617 | None:intergenic | 40.0% |
| CACTACTACAGCAAACTACA+AGG | + | chr6_1:15890910-15890929 | None:intergenic | 40.0% | |
| !! | GTAAGTGTCGGTGTTGTATT+TGG | - | chr6_1:15891236-15891255 | Msa0877160:intron | 40.0% |
| GTCGAGAAGAAAAAGAGATG+AGG | + | chr6_1:15891290-15891309 | None:intergenic | 40.0% | |
| !! | GGACATTTTAAGTGGGGATA+TGG | + | chr6_1:15891470-15891489 | None:intergenic | 40.0% |
| !! | ACACTGGCTTAAACATAGCA+AGG | - | chr6_1:15891625-15891644 | Msa0877160:intron | 40.0% |
| CCAAGTTCCCAAGGTAAAAT+TGG | + | chr6_1:15891707-15891726 | None:intergenic | 40.0% | |
| ! | CCAATTTTACCTTGGGAACT+TGG | - | chr6_1:15891704-15891723 | Msa0877160:intron | 40.0% |
| TACCCATAATATGCTGCAAC+AGG | + | chr6_1:15891746-15891765 | None:intergenic | 40.0% | |
| ATGCTATCCTAGAGAGCTTA+TGG | - | chr6_1:15891960-15891979 | Msa0877160:intron | 40.0% | |
| CTTACTTCCATAAGCTCTCT+AGG | + | chr6_1:15891970-15891989 | None:intergenic | 40.0% | |
| CCATAAGCATCCTTCCAAAT+CGG | + | chr6_1:15892040-15892059 | None:intergenic | 40.0% | |
| TGGACTTGTACAACTTACAC+TGG | - | chr6_1:15892057-15892076 | Msa0877160:intron | 40.0% | |
| TTAGCAGGAAATCAGAGAAC+AGG | - | chr6_1:15892093-15892112 | Msa0877160:intron | 40.0% | |
| TAGCAGGAAATCAGAGAACA+GGG | - | chr6_1:15892094-15892113 | Msa0877160:intron | 40.0% | |
| !! | GTCACAACCTTTTAAGTACC+TGG | + | chr6_1:15892270-15892289 | None:intergenic | 40.0% |
| TCGAAGGTCACTGATATGAA+AGG | + | chr6_1:15892357-15892376 | None:intergenic | 40.0% | |
| !!! | TGTTTTAGAAAGCCACAAGG+GGG | + | chr6_1:15892387-15892406 | None:intergenic | 40.0% |
| !!! | CTGTTTTAGAAAGCCACAAG+GGG | + | chr6_1:15892388-15892407 | None:intergenic | 40.0% |
| ! | AGAAGAAGTACGGGAAGATA+AGG | - | chr6_1:15892406-15892425 | Msa0877160:CDS | 40.0% |
| CTTGTTCACAGATAGGACTT+CGG | - | chr6_1:15892624-15892643 | Msa0877160:intron | 40.0% | |
| TACCATTTAGTGTAGGGAAC+TGG | - | chr6_1:15892729-15892748 | Msa0877160:intron | 40.0% | |
| CTTGGCATACAAACCTCTTT+GGG | + | chr6_1:15892830-15892849 | None:intergenic | 40.0% | |
| ACTTGGCATACAAACCTCTT+TGG | + | chr6_1:15892831-15892850 | None:intergenic | 40.0% | |
| ATGCACAGAAATATGGCATC+AGG | - | chr6_1:15892924-15892943 | Msa0877160:CDS | 40.0% | |
| !!! | ATTTTGACCATGCTGGCTTA+GGG | + | chr6_1:15893102-15893121 | None:intergenic | 40.0% |
| !!! | TATTTTGACCATGCTGGCTT+AGG | + | chr6_1:15893103-15893122 | None:intergenic | 40.0% |
| !!! | CTCAAGTATTTTGACCATGC+TGG | + | chr6_1:15893109-15893128 | None:intergenic | 40.0% |
| TTTCCATCATCACGATCAAC+GGG | + | chr6_1:15893226-15893245 | None:intergenic | 40.0% | |
| CTTTCCATCATCACGATCAA+CGG | + | chr6_1:15893227-15893246 | None:intergenic | 40.0% | |
| !!! | ACTGTATGGATTTTGGGATG+TGG | + | chr6_1:15893250-15893269 | None:intergenic | 40.0% |
| AAAGTATGGTGTGCATTCTG+TGG | + | chr6_1:15893278-15893297 | None:intergenic | 40.0% | |
| ! | ATGCACAGTTTTCGTTTGAG+TGG | - | chr6_1:15893319-15893338 | Msa0877160:intron | 40.0% |
| GACAGCCTGGAAATATTACA+AGG | - | chr6_1:15893341-15893360 | Msa0877160:intron | 40.0% | |
| GAAGTATAAAGGCCAAGATC+TGG | - | chr6_1:15893393-15893412 | Msa0877160:intron | 40.0% | |
| ATCGAGGGAACATAATGTGT+AGG | + | chr6_1:15893421-15893440 | None:intergenic | 40.0% | |
| ATGAGTCGACATCCATTAAC+AGG | - | chr6_1:15893439-15893458 | Msa0877160:intron | 40.0% | |
| GACATCCATTAACAGGAGAT+TGG | - | chr6_1:15893446-15893465 | Msa0877160:intron | 40.0% | |
| GCATGGATGTTTACTGTGAT+TGG | - | chr6_1:15893547-15893566 | Msa0877160:intron | 40.0% | |
| ATTGGGACAAAGTTGTCGAT+TGG | - | chr6_1:15893565-15893584 | Msa0877160:intron | 40.0% | |
| GGCAGTCACAAAATCAATCA+TGG | - | chr6_1:15893586-15893605 | Msa0877160:intron | 40.0% | |
| ATCATGGAAGGAAAGGACTA+AGG | - | chr6_1:15893602-15893621 | Msa0877160:intron | 40.0% | |
| TCATGGAAGGAAAGGACTAA+GGG | - | chr6_1:15893603-15893622 | Msa0877160:intron | 40.0% | |
| !! | CGTTTGTTACCACTTTTCAC+AGG | - | chr6_1:15893672-15893691 | Msa0877160:intron | 40.0% |
| GCACAAACTAACATGGGAAA+TGG | + | chr6_1:15894004-15894023 | None:intergenic | 40.0% | |
| ! | GCAGCTGGTTTATTAATTGC+TGG | + | chr6_1:15894154-15894173 | None:intergenic | 40.0% |
| GATGCTGATATGATCATGAG+AGG | - | chr6_1:15894229-15894248 | Msa0877160:intron | 40.0% | |
| TACTCGTAAGGAGTTGAAAC+AGG | + | chr6_1:15894295-15894314 | None:intergenic | 40.0% | |
| AAACATCAACCCAAGTCAGT+AGG | + | chr6_1:15894320-15894339 | None:intergenic | 40.0% | |
| !! | GACTTGGGTTGATGTTTATC+GGG | - | chr6_1:15894323-15894342 | Msa0877160:intron | 40.0% |
| AGGCCATTATTTGACAACAC+TGG | + | chr6_1:15894369-15894388 | None:intergenic | 40.0% | |
| GCCTTAACCTTATAATGTGG+TGG | - | chr6_1:15894396-15894415 | Msa0877160:CDS | 40.0% | |
| GTTCGTTGTCACAACCAATA+AGG | + | chr6_1:15894679-15894698 | None:intergenic | 40.0% | |
| !! | TCCGGAAATTTGCTATGCTA+TGG | - | chr6_1:15894774-15894793 | Msa0877160:CDS | 40.0% |
| GCCATAGCATAGCAAATTTC+CGG | + | chr6_1:15894778-15894797 | None:intergenic | 40.0% | |
| GAGACATATATGAATCAGGG+TGG | - | chr6_1:15894855-15894874 | Msa0877160:CDS | 40.0% | |
| CATACTTGACCAATGTAGTC+AGG | - | chr6_1:15894947-15894966 | Msa0877160:intron | 40.0% | |
| AGGAACCAAGCAACAAAACA+GGG | + | chr6_1:15895191-15895210 | None:intergenic | 40.0% | |
| AAGGAACCAAGCAACAAAAC+AGG | + | chr6_1:15895192-15895211 | None:intergenic | 40.0% | |
| AGAAAACAGAGGGAAAACAG+AGG | + | chr6_1:15895252-15895271 | None:intergenic | 40.0% | |
| AGTTCTTACGTAGGTTCGAT+CGG | + | chr6_1:15895362-15895381 | None:intergenic | 40.0% | |
| AGCAAGGTCTCAAACTGAAA+AGG | + | chr6_1:15895453-15895472 | None:intergenic | 40.0% | |
| !! | TGAGGATTTTGAAAGGAGAG+GGG | + | chr6_1:15895538-15895557 | None:intergenic | 40.0% |
| TTATACAGAGAGCTTCTAGC+TGG | + | chr6_1:15895612-15895631 | None:intergenic | 40.0% | |
| ! | TCGCATGAGAGATTTTCACA+GGG | - | chr6_1:15895801-15895820 | Msa0877160:intron | 40.0% |
| !! | GATGAAGATAATGGACACCT+GGG | + | chr6_1:15895850-15895869 | None:intergenic | 40.0% |
| AGGTGTCCATTATCTTCATC+CGG | - | chr6_1:15895850-15895869 | Msa0877160:intron | 40.0% | |
| CACAAACCGGATGAAGATAA+TGG | + | chr6_1:15895859-15895878 | None:intergenic | 40.0% | |
| TCGGTTAAAGCTTCACAAAC+CGG | + | chr6_1:15895872-15895891 | None:intergenic | 40.0% | |
| GTAGCAGACAGAGATAATGT+CGG | + | chr6_1:15895891-15895910 | None:intergenic | 40.0% | |
| CTTTGGGTATTATTGTGCAG+TGG | - | chr6_1:15895964-15895983 | Msa0877160:intron | 40.0% | |
| TGAGTTGTCTTTCATGCATC+AGG | - | chr6_1:15896045-15896064 | Msa0877160:intron | 40.0% | |
| AGATAATGTGCAATCAACGG+TGG | + | chr6_1:15896094-15896113 | None:intergenic | 40.0% | |
| AACATGATATCGCGACTAGA+AGG | + | chr6_1:15896142-15896161 | None:intergenic | 40.0% | |
| GCGATATCATGTTATGTACG+CGG | - | chr6_1:15896149-15896168 | Msa0877160:intron | 40.0% | |
| TATCATGTTATGTACGCGGA+AGG | - | chr6_1:15896153-15896172 | Msa0877160:intron | 40.0% | |
| CTACTTACTTGAGAGGCTAA+TGG | - | chr6_1:15896394-15896413 | Msa0877160:intron | 40.0% | |
| ACTTACTTGAGAGGCTAATG+GGG | - | chr6_1:15896396-15896415 | Msa0877160:intron | 40.0% | |
| CTATATTTGACGTTCGGTTC+AGG | + | chr6_1:15896815-15896834 | None:intergenic | 40.0% | |
| ! | TGAGATTCAGTGTTGGGAAT+TGG | - | chr6_1:15896852-15896871 | Msa0877160:intron | 40.0% |
| GACATGCTTAGCATAGAATG+TGG | - | chr6_1:15896992-15897011 | Msa0877160:intron | 40.0% | |
| CAGAAGAAAGTGGAACTTCA+AGG | - | chr6_1:15897104-15897123 | Msa0877160:intron | 40.0% | |
| AGTGGAACTTCAAGGGAAAT+CGG | - | chr6_1:15897112-15897131 | Msa0877160:intron | 40.0% | |
| GACAAACCATTCAGAGGAAT+TGG | - | chr6_1:15897177-15897196 | Msa0877160:intron | 40.0% | |
| ACCCAAAACCTGAAAGAACT+TGG | + | chr6_1:15897250-15897269 | None:intergenic | 40.0% | |
| !!! | AAGTTCTTTCAGGTTTTGGG+TGG | - | chr6_1:15897249-15897268 | Msa0877160:intron | 40.0% |
| !!! | CGTCATTTTTGTCGTGTGTT+CGG | - | chr6_1:15897309-15897328 | Msa0877160:intron | 40.0% |
| !!! | GTCATTTTTGTCGTGTGTTC+GGG | - | chr6_1:15897310-15897329 | Msa0877160:intron | 40.0% |
| AAGCATGCAATCAGGATTCA+TGG | - | chr6_1:15897381-15897400 | Msa0877160:intron | 40.0% | |
| TCAGGATTCATGGAAAGCAA+TGG | - | chr6_1:15897391-15897410 | Msa0877160:intron | 40.0% | |
| !! | AAGGGGCAAAGAAGGTATCA+TGG | - | chr6_1:15889274-15889293 | Msa0877160:three_prime_UTR | 45.0% |
| ! | AGAAGCCTTGTAATAGGACC+AGG | + | chr6_1:15889390-15889409 | None:intergenic | 45.0% |
| GACATCCCAAAACTGGTGAT+TGG | - | chr6_1:15889487-15889506 | Msa0877160:three_prime_UTR | 45.0% | |
| GGTGTCCATGTACTTGTCAA+TGG | - | chr6_1:15890010-15890029 | Msa0877160:CDS | 45.0% | |
| GACTTTATATTGTCCCGAGC+TGG | - | chr6_1:15890167-15890186 | Msa0877160:CDS | 45.0% | |
| ! | ACACGAACGAAGTACTAACC+AGG | - | chr6_1:15890213-15890232 | Msa0877160:CDS | 45.0% |
| ! | GAAGTACTAACCAGGAGATC+AGG | - | chr6_1:15890221-15890240 | Msa0877160:CDS | 45.0% |
| GTTCTGCTTAGGCATGCTTT+AGG | - | chr6_1:15890328-15890347 | Msa0877160:CDS | 45.0% | |
| CGACACTTACATGTAGACAC+GGG | + | chr6_1:15891226-15891245 | None:intergenic | 45.0% | |
| CCGACACTTACATGTAGACA+CGG | + | chr6_1:15891227-15891246 | None:intergenic | 45.0% | |
| CCGTGTCTACATGTAAGTGT+CGG | - | chr6_1:15891224-15891243 | Msa0877160:intron | 45.0% | |
| ! | CGGCAGGTTTGTTTATTGCA+GGG | + | chr6_1:15891598-15891617 | None:intergenic | 45.0% |
| CCTGCAATAAACAAACCTGC+CGG | - | chr6_1:15891596-15891615 | Msa0877160:intron | 45.0% | |
| CTGCAATAAACAAACCTGCC+GGG | - | chr6_1:15891597-15891616 | Msa0877160:intron | 45.0% | |
| TGCAATAAACAAACCTGCCG+GGG | - | chr6_1:15891598-15891617 | Msa0877160:intron | 45.0% | |
| TTTAAGCCAGTGTACTACCC+CGG | + | chr6_1:15891618-15891637 | None:intergenic | 45.0% | |
| !! | AACTTGGTGCAGAGAAAGGA+AGG | - | chr6_1:15891720-15891739 | Msa0877160:intron | 45.0% |
| AGGCCTGTTGCAGCATATTA+TGG | - | chr6_1:15891740-15891759 | Msa0877160:intron | 45.0% | |
| GGCCTGTTGCAGCATATTAT+GGG | - | chr6_1:15891741-15891760 | Msa0877160:intron | 45.0% | |
| TTCCATAAGCTCCTCCGATT+TGG | - | chr6_1:15892023-15892042 | Msa0877160:intron | 45.0% | |
| TTCCAAATCGGAGGAGCTTA+TGG | + | chr6_1:15892028-15892047 | None:intergenic | 45.0% | |
| !! | ATAAGCTCCTCCGATTTGGA+AGG | - | chr6_1:15892027-15892046 | Msa0877160:intron | 45.0% |
| TAAGCATCCTTCCAAATCGG+AGG | + | chr6_1:15892037-15892056 | None:intergenic | 45.0% | |
| !! | CCGATTTGGAAGGATGCTTA+TGG | - | chr6_1:15892037-15892056 | Msa0877160:intron | 45.0% |
| TACGGGAAGATAAGGAACAC+TGG | - | chr6_1:15892414-15892433 | Msa0877160:CDS | 45.0% | |
| ACGGGAAGATAAGGAACACT+GGG | - | chr6_1:15892415-15892434 | Msa0877160:CDS | 45.0% | |
| ACTGGTGACATATACGGGAA+AGG | - | chr6_1:15892449-15892468 | Msa0877160:CDS | 45.0% | |
| GTGACATATACGGGAAAGGA+TGG | - | chr6_1:15892453-15892472 | Msa0877160:CDS | 45.0% | |
| GGATGGATCAGTGAGATGTA+TGG | - | chr6_1:15892470-15892489 | Msa0877160:CDS | 45.0% | |
| GATAACTTGATGCTCTACCC+AGG | - | chr6_1:15892659-15892678 | Msa0877160:intron | 45.0% | |
| ! | GAACCGGTTCTTCTTCACTA+CGG | - | chr6_1:15892704-15892723 | Msa0877160:intron | 45.0% |
| ! | AACCGGTTCTTCTTCACTAC+GGG | - | chr6_1:15892705-15892724 | Msa0877160:intron | 45.0% |
| ! | TACGGGCTACCATTTAGTGT+AGG | - | chr6_1:15892722-15892741 | Msa0877160:intron | 45.0% |
| ! | ACGGGCTACCATTTAGTGTA+GGG | - | chr6_1:15892723-15892742 | Msa0877160:intron | 45.0% |
| GACCAGTTCCCTACACTAAA+TGG | + | chr6_1:15892734-15892753 | None:intergenic | 45.0% | |
| AAACTCGCTCACCATGATGA+TGG | - | chr6_1:15892761-15892780 | Msa0877160:intron | 45.0% | |
| !! | TCTTTGGGATAAGGAGGTTC+TGG | + | chr6_1:15892815-15892834 | None:intergenic | 45.0% |
| AGAACCTCCTTATCCCAAAG+AGG | - | chr6_1:15892814-15892833 | Msa0877160:intron | 45.0% | |
| !! | CAAACCTCTTTGGGATAAGG+AGG | + | chr6_1:15892821-15892840 | None:intergenic | 45.0% |
| GAAGGTCTTCTACTACAGCA+TGG | - | chr6_1:15893064-15893083 | Msa0877160:intron | 45.0% | |
| GCTGCAATGACGAGGATTTA+AGG | - | chr6_1:15893371-15893390 | Msa0877160:intron | 45.0% | |
| AATGTGTAGGAGCCAGATCT+TGG | + | chr6_1:15893408-15893427 | None:intergenic | 45.0% | |
| !! | AATGGATGTCGACTCATCGA+GGG | + | chr6_1:15893436-15893455 | None:intergenic | 45.0% |
| !! | TAATGGATGTCGACTCATCG+AGG | + | chr6_1:15893437-15893456 | None:intergenic | 45.0% |
| TGTTGCTCGTCATTTCTGCA+TGG | - | chr6_1:15893530-15893549 | Msa0877160:intron | 45.0% | |
| ! | CGGGAAGCACAAACTAACAT+GGG | + | chr6_1:15894010-15894029 | None:intergenic | 45.0% |
| ! | TCGGGAAGCACAAACTAACA+TGG | + | chr6_1:15894011-15894030 | None:intergenic | 45.0% |
| !! | ATGTTAGTTTGTGCTTCCCG+AGG | - | chr6_1:15894010-15894029 | Msa0877160:CDS | 45.0% |
| AACCAGCTGCAGTTCTTCAT+TGG | - | chr6_1:15894164-15894183 | Msa0877160:intron | 45.0% | |
| TTGAATTCCCACGGTGTGAT+TGG | + | chr6_1:15894256-15894275 | None:intergenic | 45.0% | |
| !! | CGAGAAGCTTTGAATTCCCA+CGG | + | chr6_1:15894265-15894284 | None:intergenic | 45.0% |
| TGGGAATTCAAAGCTTCTCG+TGG | - | chr6_1:15894265-15894284 | Msa0877160:intron | 45.0% | |
| AGTCAGTAGGCTTACTCGTA+AGG | + | chr6_1:15894307-15894326 | None:intergenic | 45.0% | |
| ! | TACGAGTAAGCCTACTGACT+TGG | - | chr6_1:15894307-15894326 | Msa0877160:intron | 45.0% |
| !! | ACGAGTAAGCCTACTGACTT+GGG | - | chr6_1:15894308-15894327 | Msa0877160:intron | 45.0% |
| TTGCATGCCAGCTACCTTAT+TGG | - | chr6_1:15894662-15894681 | Msa0877160:CDS | 45.0% | |
| GTCACAACCAATAAGGTAGC+TGG | + | chr6_1:15894672-15894691 | None:intergenic | 45.0% | |
| ATTACACACTAGCCATCCAG+AGG | - | chr6_1:15894706-15894725 | Msa0877160:CDS | 45.0% | |
| GCTATGGCTGCATAAAACAG+AGG | - | chr6_1:15894790-15894809 | Msa0877160:CDS | 45.0% | |
| ATGGCTGCATAAAACAGAGG+AGG | - | chr6_1:15894793-15894812 | Msa0877160:CDS | 45.0% | |
| GTATGGTTACTCATTTGGCG+CGG | - | chr6_1:15894889-15894908 | Msa0877160:intron | 45.0% | |
| ACACGGTTCGTAAGTAGGAT+CGG | + | chr6_1:15895308-15895327 | None:intergenic | 45.0% | |
| ACGTAACACGGTTCGTAAGT+AGG | + | chr6_1:15895313-15895332 | None:intergenic | 45.0% | |
| TAAAGTCGGGGAACGTAACA+CGG | + | chr6_1:15895325-15895344 | None:intergenic | 45.0% | |
| TCAGGAACGAGTTCTTACGT+AGG | + | chr6_1:15895371-15895390 | None:intergenic | 45.0% | |
| GTGTGTCAAGCAATGTAGTC+AGG | + | chr6_1:15895389-15895408 | None:intergenic | 45.0% | |
| !! | AGGATTTTGAAAGGAGAGGG+GGG | + | chr6_1:15895536-15895555 | None:intergenic | 45.0% |
| !! | GAGGATTTTGAAAGGAGAGG+GGG | + | chr6_1:15895537-15895556 | None:intergenic | 45.0% |
| TAGAAAGCTTCAAGTAGCGC+TGG | - | chr6_1:15895778-15895797 | Msa0877160:intron | 45.0% | |
| ! | GTCGCATGAGAGATTTTCAC+AGG | - | chr6_1:15895800-15895819 | Msa0877160:intron | 45.0% |
| ! | CGCATGAGAGATTTTCACAG+GGG | - | chr6_1:15895802-15895821 | Msa0877160:intron | 45.0% |
| !! | GGATGAAGATAATGGACACC+TGG | + | chr6_1:15895851-15895870 | None:intergenic | 45.0% |
| !! | ATTGTGCAGTGGCTTGTTAC+TGG | - | chr6_1:15895975-15895994 | Msa0877160:intron | 45.0% |
| GATATCGCGACTAGAAGGAA+AGG | + | chr6_1:15896137-15896156 | None:intergenic | 45.0% | |
| ! | CTGCCAAGCAAGGATAGTTT+TGG | + | chr6_1:15896251-15896270 | None:intergenic | 45.0% |
| TCCTTGCTTGGCAGTTTATG+AGG | - | chr6_1:15896257-15896276 | Msa0877160:intron | 45.0% | |
| ACCTCATAAACTGCCAAGCA+AGG | + | chr6_1:15896261-15896280 | None:intergenic | 45.0% | |
| TGGCAAAGACCTGTTATAGC+TGG | - | chr6_1:15896305-15896324 | Msa0877160:intron | 45.0% | |
| CAAAGACCTGTTATAGCTGG+TGG | - | chr6_1:15896308-15896327 | Msa0877160:intron | 45.0% | |
| CGTAAACCACCAGCTATAAC+AGG | + | chr6_1:15896317-15896336 | None:intergenic | 45.0% | |
| ! | GTCGCATGAGAGATTTTCAC+AGG | + | chr6_1:15895800-15895819 | None:intergenic | 45.0% |
| TTCGGTTCAGGAACATATCC+CGG | + | chr6_1:15896803-15896822 | None:intergenic | 45.0% | |
| TGATCAAGAGTTGAGGGATC+CGG | + | chr6_1:15896947-15896966 | None:intergenic | 45.0% | |
| ! | ATGGTTTGTCACGACACGAT+TGG | + | chr6_1:15897167-15897186 | None:intergenic | 45.0% |
| TGTCGTGACAAACCATTCAG+AGG | - | chr6_1:15897171-15897190 | Msa0877160:intron | 45.0% | |
| CACTTGCCAATTCCTCTGAA+TGG | + | chr6_1:15897186-15897205 | None:intergenic | 45.0% | |
| GGAATTGGCAAGTGTTCAGA+AGG | - | chr6_1:15897192-15897211 | Msa0877160:intron | 45.0% | |
| ATTGGCAAGTGTTCAGAAGG+AGG | - | chr6_1:15897195-15897214 | Msa0877160:intron | 45.0% | |
| GTCATAGAAGACGAGGAACA+AGG | - | chr6_1:15897332-15897351 | Msa0877160:intron | 45.0% | |
| ! | AGGAGAAGAAGCATGCAATC+AGG | - | chr6_1:15897373-15897392 | Msa0877160:intron | 45.0% |
| ! | CGATGCTCCTTTTCATTCTC+CGG | - | chr6_1:15897454-15897473 | Msa0877160:intron | 45.0% |
| ! | GATGCTCCTTTTCATTCTCC+GGG | - | chr6_1:15897455-15897474 | Msa0877160:intron | 45.0% |
| AAACCTCAGAACTCTCAGAC+TGG | + | chr6_1:15897604-15897623 | None:intergenic | 45.0% | |
| !! | AGTCTGAGAGTTCTGAGGTT+TGG | - | chr6_1:15897603-15897622 | Msa0877160:intron | 45.0% |
| ! | CAATTTGAGTTTGCAGGGGT+AGG | + | chr6_1:15897742-15897761 | None:intergenic | 45.0% |
| CTACCCCTGCAAACTCAAAT+TGG | - | chr6_1:15897740-15897759 | Msa0877160:CDS | 45.0% | |
| GTGTCAGTGTTGTGTGTGTC+TGG | - | chr6_1:15889635-15889654 | Msa0877160:three_prime_UTR | 50.0% | |
| GGATTTGAACCCTGATCTCC+TGG | + | chr6_1:15890234-15890253 | None:intergenic | 50.0% | |
| AGATACAGCAACCAGCATGC+TGG | + | chr6_1:15891338-15891357 | None:intergenic | 50.0% | |
| ! | ATTGCAGGGTACCTGCATAG+AGG | + | chr6_1:15891584-15891603 | None:intergenic | 50.0% |
| ! | CCGGCAGGTTTGTTTATTGC+AGG | + | chr6_1:15891599-15891618 | None:intergenic | 50.0% |
| GACGCAGACATGATTATCCG+TGG | - | chr6_1:15891680-15891699 | Msa0877160:intron | 50.0% | |
| ! | TCCGTGGCCCAATTTTACCT+TGG | - | chr6_1:15891696-15891715 | Msa0877160:intron | 50.0% |
| CCCAAGGTAAAATTGGGCCA+CGG | + | chr6_1:15891700-15891719 | None:intergenic | 50.0% | |
| ! | CCGTGGCCCAATTTTACCTT+GGG | - | chr6_1:15891697-15891716 | Msa0877160:intron | 50.0% |
| TTCTCTGCACCAAGTTCCCA+AGG | + | chr6_1:15891716-15891735 | None:intergenic | 50.0% | |
| !! | TGGGAACTTGGTGCAGAGAA+AGG | - | chr6_1:15891716-15891735 | Msa0877160:intron | 50.0% |
| CACTGGGCGACAAACATAAC+TGG | - | chr6_1:15892431-15892450 | Msa0877160:CDS | 50.0% | |
| CCTCACGAGGGATATAACCT+GGG | + | chr6_1:15892679-15892698 | None:intergenic | 50.0% | |
| CCAGGTTATATCCCTCGTGA+GGG | - | chr6_1:15892677-15892696 | Msa0877160:intron | 50.0% | |
| AGCCCGTAGTGAAGAAGAAC+CGG | + | chr6_1:15892710-15892729 | None:intergenic | 50.0% | |
| !! | AAGGAGGTTCTGGAAAGAGC+CGG | + | chr6_1:15892805-15892824 | None:intergenic | 50.0% |
| TGGAACTTGACGCTAACCGA+AGG | - | chr6_1:15892999-15893018 | Msa0877160:CDS | 50.0% | |
| CTACTACAGCATGGAGCGAA+TGG | - | chr6_1:15893073-15893092 | Msa0877160:intron | 50.0% | |
| ACACCCGTTGATCGTGATGA+TGG | - | chr6_1:15893220-15893239 | Msa0877160:intron | 50.0% | |
| TTTCGTTTGAGTGGACAGCC+TGG | - | chr6_1:15893328-15893347 | Msa0877160:intron | 50.0% | |
| GTTACTGAGCTGCAATGACG+AGG | - | chr6_1:15893363-15893382 | Msa0877160:intron | 50.0% | |
| !! | TTAGTTTGTGCTTCCCGAGG+TGG | - | chr6_1:15894013-15894032 | Msa0877160:CDS | 50.0% |
| ! | TAGTTTGTGCTTCCCGAGGT+GGG | - | chr6_1:15894014-15894033 | Msa0877160:CDS | 50.0% |
| AGCCAATGAAGAACTGCAGC+TGG | + | chr6_1:15894169-15894188 | None:intergenic | 50.0% | |
| GGGTGGATCAGTGAGATGTA+TGG | - | chr6_1:15894872-15894891 | Msa0877160:CDS | 50.0% | |
| GGACTCGTTCCTGACTACAT+TGG | + | chr6_1:15894959-15894978 | None:intergenic | 50.0% | |
| ATCGTACGACCCTACATGCT+GGG | + | chr6_1:15894980-15894999 | None:intergenic | 50.0% | |
| ACCAGAGTAGAGTCGAAGCA+CGG | + | chr6_1:15895025-15895044 | None:intergenic | 50.0% | |
| GCTTCGACTCTACTCTGGTT+CGG | - | chr6_1:15895026-15895045 | Msa0877160:intron | 50.0% | |
| GGTTCGTAAGTAGGATCGGT+AGG | + | chr6_1:15895304-15895323 | None:intergenic | 50.0% | |
| TGGTGAAGGGACGTAAAGTC+GGG | + | chr6_1:15895338-15895357 | None:intergenic | 50.0% | |
| CTGGTGAAGGGACGTAAAGT+CGG | + | chr6_1:15895339-15895358 | None:intergenic | 50.0% | |
| !! | AGATAATGGACACCTGGGCA+GGG | + | chr6_1:15895845-15895864 | None:intergenic | 50.0% |
| !! | AAGATAATGGACACCTGGGC+AGG | + | chr6_1:15895846-15895865 | None:intergenic | 50.0% |
| AGCACAGTAGGACGTTAAGG+TGG | + | chr6_1:15895915-15895934 | None:intergenic | 50.0% | |
| ACCTTAACGTCCTACTGTGC+TGG | - | chr6_1:15895914-15895933 | Msa0877160:intron | 50.0% | |
| CATGGAATAGCCAGCACAGT+AGG | + | chr6_1:15895927-15895946 | None:intergenic | 50.0% | |
| TGCAATGCCAGTATACTGCC+CGG | - | chr6_1:15896187-15896206 | Msa0877160:intron | 50.0% | |
| AAACCAACCGGGCAGTATAC+TGG | + | chr6_1:15896197-15896216 | None:intergenic | 50.0% | |
| ! | AGTATACTGCCCGGTTGGTT+TGG | - | chr6_1:15896196-15896215 | Msa0877160:intron | 50.0% |
| TGAAACACGGCCAAACCAAC+CGG | + | chr6_1:15896209-15896228 | None:intergenic | 50.0% | |
| GGCTGGTATCAGCTGAAACA+CGG | + | chr6_1:15896222-15896241 | None:intergenic | 50.0% | |
| GCTTGGCAGTTTATGAGGTG+AGG | - | chr6_1:15896262-15896281 | Msa0877160:intron | 50.0% | |
| AGGATGTTCGCAAGCCTTGA+GGG | - | chr6_1:15896282-15896301 | Msa0877160:intron | 50.0% | |
| TAGCCTATACAGGCAAGCGA+AGG | + | chr6_1:15896341-15896360 | None:intergenic | 50.0% | |
| TCGCTTGCCTGTATAGGCTA+TGG | - | chr6_1:15896341-15896360 | Msa0877160:intron | 50.0% | |
| ACAGGAGCCATAGCCTATAC+AGG | + | chr6_1:15896351-15896370 | None:intergenic | 50.0% | |
| ACCAGCGCTACTTACTTGAG+AGG | - | chr6_1:15896387-15896406 | Msa0877160:intron | 50.0% | |
| TCCGAGGAGCAATAGCGTTT+GGG | - | chr6_1:15896481-15896500 | Msa0877160:intron | 50.0% | |
| ACCCAAACGCTATTGCTCCT+CGG | + | chr6_1:15896485-15896504 | None:intergenic | 50.0% | |
| TCGGTTCAGGAACATATCCC+GGG | + | chr6_1:15896802-15896821 | None:intergenic | 50.0% | |
| TGTTCGGGTCATAGAAGACG+AGG | - | chr6_1:15897325-15897344 | Msa0877160:intron | 50.0% | |
| ! | TCCTTTTCATTCTCCGGGTC+CGG | - | chr6_1:15897460-15897479 | Msa0877160:intron | 50.0% |
| GATGAACTCACCTTTACGCC+CGG | + | chr6_1:15897482-15897501 | None:intergenic | 50.0% | |
| AAGCCAGTCTGAGAGTTCTG+AGG | - | chr6_1:15897598-15897617 | Msa0877160:intron | 50.0% | |
| ATTGTCCCGAGCTGGCAGTT+TGG | - | chr6_1:15890175-15890194 | Msa0877160:CDS | 55.0% | |
| ACCAACCAAACTGCCAGCTC+GGG | + | chr6_1:15890183-15890202 | None:intergenic | 55.0% | |
| CACCAACCAAACTGCCAGCT+CGG | + | chr6_1:15890184-15890203 | None:intergenic | 55.0% | |
| !! | GCAGTTTGGTTGGTGAGCTG+AGG | - | chr6_1:15890189-15890208 | Msa0877160:CDS | 55.0% |
| CCAACTTTGTCGCACAGCTC+TGG | + | chr6_1:15892323-15892342 | None:intergenic | 55.0% | |
| CCAGAGCTGTGCGACAAAGT+TGG | - | chr6_1:15892320-15892339 | Msa0877160:intron | 55.0% | |
| GAGCTGTGCGACAAAGTTGG+CGG | - | chr6_1:15892323-15892342 | Msa0877160:intron | 55.0% | |
| AGCTGTGCGACAAAGTTGGC+GGG | - | chr6_1:15892324-15892343 | Msa0877160:intron | 55.0% | |
| !!! | CGACAAAGTTGGCGGGCTTT+TGG | - | chr6_1:15892331-15892350 | Msa0877160:intron | 55.0% |
| CCCAGGTTATATCCCTCGTG+AGG | - | chr6_1:15892676-15892695 | Msa0877160:intron | 55.0% | |
| CCCTCACGAGGGATATAACC+TGG | + | chr6_1:15892680-15892699 | None:intergenic | 55.0% | |
| CCGGTTCAATTCCCTCACGA+GGG | + | chr6_1:15892691-15892710 | None:intergenic | 55.0% | |
| CCCTCGTGAGGGAATTGAAC+CGG | - | chr6_1:15892688-15892707 | Msa0877160:intron | 55.0% | |
| ! | ACCGGTTCAATTCCCTCACG+AGG | + | chr6_1:15892692-15892711 | None:intergenic | 55.0% |
| ATGGTTGCCCTAAGCCAGCA+TGG | - | chr6_1:15893092-15893111 | Msa0877160:intron | 55.0% | |
| TGAGAGGACCAATCACACCG+TGG | - | chr6_1:15894245-15894264 | Msa0877160:intron | 55.0% | |
| GAGAGGACCAATCACACCGT+GGG | - | chr6_1:15894246-15894265 | Msa0877160:intron | 55.0% | |
| CTTTGTCGCAAGCCTCTGGA+TGG | + | chr6_1:15894721-15894740 | None:intergenic | 55.0% | |
| CCAACTTTGTCGCAAGCCTC+TGG | + | chr6_1:15894725-15894744 | None:intergenic | 55.0% | |
| CCAGAGGCTTGCGACAAAGT+TGG | - | chr6_1:15894722-15894741 | Msa0877160:CDS | 55.0% | |
| GAGGCTTGCGACAAAGTTGG+TGG | - | chr6_1:15894725-15894744 | Msa0877160:CDS | 55.0% | |
| TTACTCATTTGGCGCGGCTG+AGG | - | chr6_1:15894895-15894914 | Msa0877160:intron | 55.0% | |
| AGGAACGAGTCCCAGCATGT+AGG | - | chr6_1:15894967-15894986 | Msa0877160:intron | 55.0% | |
| GGAACGAGTCCCAGCATGTA+GGG | - | chr6_1:15894968-15894987 | Msa0877160:intron | 55.0% | |
| GATCGTACGACCCTACATGC+TGG | + | chr6_1:15894981-15895000 | None:intergenic | 55.0% | |
| ACCGTGCTTCGACTCTACTC+TGG | - | chr6_1:15895021-15895040 | Msa0877160:intron | 55.0% | |
| GGTGAAGGGACGTAAAGTCG+GGG | + | chr6_1:15895337-15895356 | None:intergenic | 55.0% | |
| AGGTTCGATCGGCTGGTGAA+GGG | + | chr6_1:15895351-15895370 | None:intergenic | 55.0% | |
| TAGGTTCGATCGGCTGGTGA+AGG | + | chr6_1:15895352-15895371 | None:intergenic | 55.0% | |
| CTTACGTAGGTTCGATCGGC+TGG | + | chr6_1:15895358-15895377 | None:intergenic | 55.0% | |
| TTGAAAGGAGAGGGGGGAGA+GGG | + | chr6_1:15895530-15895549 | None:intergenic | 55.0% | |
| TTTGAAAGGAGAGGGGGGAG+AGG | + | chr6_1:15895531-15895550 | None:intergenic | 55.0% | |
| ACCTGGGCAGGGTTGCATTA+AGG | + | chr6_1:15895834-15895853 | None:intergenic | 55.0% | |
| GCCAGCACAGTAGGACGTTA+AGG | + | chr6_1:15895918-15895937 | None:intergenic | 55.0% | |
| !! | GTGCAGTGGCTTGTTACTGG+AGG | - | chr6_1:15895978-15895997 | Msa0877160:intron | 55.0% |
| ATGCCAGTATACTGCCCGGT+TGG | - | chr6_1:15896191-15896210 | Msa0877160:intron | 55.0% | |
| GAAACACGGCCAAACCAACC+GGG | + | chr6_1:15896208-15896227 | None:intergenic | 55.0% | |
| GAGGATGTTCGCAAGCCTTG+AGG | - | chr6_1:15896281-15896300 | Msa0877160:intron | 55.0% | |
| ATGTTCGCAAGCCTTGAGGG+TGG | - | chr6_1:15896285-15896304 | Msa0877160:intron | 55.0% | |
| ACAGGTCTTTGCCACCCTCA+AGG | + | chr6_1:15896299-15896318 | None:intergenic | 55.0% | |
| CGTCCTTCGCTTGCCTGTAT+AGG | - | chr6_1:15896335-15896354 | Msa0877160:intron | 55.0% | |
| GCCTCTCAAGTAAGTAGCGC+TGG | + | chr6_1:15896391-15896410 | None:intergenic | 55.0% | |
| GTGTCCTGAGAAGATCTCCG+AGG | - | chr6_1:15896465-15896484 | Msa0877160:intron | 55.0% | |
| TGCTCCTCGGAGATCTTCTC+AGG | + | chr6_1:15896472-15896491 | None:intergenic | 55.0% | |
| CTCCGAGGAGCAATAGCGTT+TGG | - | chr6_1:15896480-15896499 | Msa0877160:intron | 55.0% | |
| GGAGCTTCGACAAAGCAGAC+TGG | - | chr6_1:15896873-15896892 | Msa0877160:intron | 55.0% | |
| !! | AGACTGGCGAGAGGTTGATG+TGG | - | chr6_1:15896889-15896908 | Msa0877160:intron | 55.0% |
| ATCCGGTGGGTCTGGGAATT+TGG | + | chr6_1:15896930-15896949 | None:intergenic | 55.0% | |
| CAAGAGTTGAGGGATCCGGT+GGG | + | chr6_1:15896943-15896962 | None:intergenic | 55.0% | |
| TCAAGAGTTGAGGGATCCGG+TGG | + | chr6_1:15896944-15896963 | None:intergenic | 55.0% | |
| TGGAAAGCAATGGACGCGAC+CGG | - | chr6_1:15897401-15897420 | Msa0877160:intron | 55.0% | |
| AATCAACATCACGGCCGTGC+CGG | + | chr6_1:15897423-15897442 | None:intergenic | 55.0% | |
| ! | CCTTTTCATTCTCCGGGTCC+GGG | - | chr6_1:15897461-15897480 | Msa0877160:intron | 55.0% |
| TGCTATGCAGGGATCGCACA+AGG | - | chr6_1:15897515-15897534 | Msa0877160:intron | 55.0% | |
| TCCCGAGCTGGCAGTTTGGT+TGG | - | chr6_1:15890179-15890198 | Msa0877160:CDS | 60.0% | |
| AACCTGCCGGGGTAGTACAC+TGG | - | chr6_1:15891609-15891628 | Msa0877160:intron | 60.0% | |
| ACAAGGGGGCGAATCGTCGA+AGG | + | chr6_1:15892373-15892392 | None:intergenic | 60.0% | |
| TTCGACGATTCGCCCCCTTG+TGG | - | chr6_1:15892372-15892391 | Msa0877160:CDS | 60.0% | |
| CTTGACGCTAACCGAAGGCG+AGG | - | chr6_1:15893004-15893023 | Msa0877160:CDS | 60.0% | |
| !! | GAAGCACGGTCGAGGTACTG+TGG | + | chr6_1:15895011-15895030 | None:intergenic | 60.0% |
| GTAGAGTCGAAGCACGGTCG+AGG | + | chr6_1:15895019-15895038 | None:intergenic | 60.0% | |
| GCCTTAATGCAACCCTGCCC+AGG | - | chr6_1:15895830-15895849 | Msa0877160:intron | 60.0% | |
| CGACAAAGCAGACTGGCGAG+AGG | - | chr6_1:15896880-15896899 | Msa0877160:intron | 60.0% | |
| GGCCAAATTCCCAGACCCAC+CGG | - | chr6_1:15896925-15896944 | Msa0877160:intron | 60.0% | |
| TTGAGGGATCCGGTGGGTCT+GGG | + | chr6_1:15896937-15896956 | None:intergenic | 60.0% | |
| CCCGGACCCGGAGAATGAAA+AGG | + | chr6_1:15897464-15897483 | None:intergenic | 60.0% | |
| AGCCAGTGTACTACCCCGGC+AGG | + | chr6_1:15891614-15891633 | None:intergenic | 65.0% | |
| GTTGAGGGATCCGGTGGGTC+TGG | + | chr6_1:15896938-15896957 | None:intergenic | 65.0% | |
| AGCAATGGACGCGACCGGCA+CGG | - | chr6_1:15897406-15897425 | Msa0877160:intron | 65.0% | |
| TTCTCCGGGTCCGGGCGTAA+AGG | - | chr6_1:15897469-15897488 | Msa0877160:intron | 65.0% | |
| CTCACCTTTACGCCCGGACC+CGG | + | chr6_1:15897476-15897495 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_1 | gene | 15889252 | 15897918 | 15889252 | ID=Msa0877160;Name=Msa0877160 |
| chr6_1 | mRNA | 15889252 | 15897918 | 15889252 | ID=Msa0877160-mRNA-1;Parent=Msa0877160;Name=Msa0877160-mRNA-1;_AED=0.18;_eAED=0.18;_QI=0|0.5|0.33|1|0.5|0.22|9|471|712 |
| chr6_1 | exon | 15889252 | 15890412 | 15889252 | ID=Msa0877160-mRNA-1:exon:4582;Parent=Msa0877160-mRNA-1 |
| chr6_1 | exon | 15892356 | 15892497 | 15892356 | ID=Msa0877160-mRNA-1:exon:4581;Parent=Msa0877160-mRNA-1 |
| chr6_1 | exon | 15892907 | 15893023 | 15892907 | ID=Msa0877160-mRNA-1:exon:4580;Parent=Msa0877160-mRNA-1 |
| chr6_1 | exon | 15893703 | 15893889 | 15893703 | ID=Msa0877160-mRNA-1:exon:4579;Parent=Msa0877160-mRNA-1 |
| chr6_1 | exon | 15893938 | 15894181 | 15893938 | ID=Msa0877160-mRNA-1:exon:4578;Parent=Msa0877160-mRNA-1 |
| chr6_1 | exon | 15894335 | 15894535 | 15894335 | ID=Msa0877160-mRNA-1:exon:4577;Parent=Msa0877160-mRNA-1 |
| chr6_1 | exon | 15894656 | 15894899 | 15894656 | ID=Msa0877160-mRNA-1:exon:4576;Parent=Msa0877160-mRNA-1 |
| chr6_1 | exon | 15895408 | 15895489 | 15895408 | ID=Msa0877160-mRNA-1:exon:4575;Parent=Msa0877160-mRNA-1 |
| chr6_1 | exon | 15897687 | 15897918 | 15897687 | ID=Msa0877160-mRNA-1:exon:4574;Parent=Msa0877160-mRNA-1 |
| chr6_1 | CDS | 15897687 | 15897918 | 15897687 | ID=Msa0877160-mRNA-1:cds;Parent=Msa0877160-mRNA-1 |
| chr6_1 | CDS | 15895408 | 15895489 | 15895408 | ID=Msa0877160-mRNA-1:cds;Parent=Msa0877160-mRNA-1 |
| chr6_1 | CDS | 15894656 | 15894899 | 15894656 | ID=Msa0877160-mRNA-1:cds;Parent=Msa0877160-mRNA-1 |
| chr6_1 | CDS | 15894335 | 15894535 | 15894335 | ID=Msa0877160-mRNA-1:cds;Parent=Msa0877160-mRNA-1 |
| chr6_1 | CDS | 15893938 | 15894181 | 15893938 | ID=Msa0877160-mRNA-1:cds;Parent=Msa0877160-mRNA-1 |
| chr6_1 | CDS | 15893703 | 15893889 | 15893703 | ID=Msa0877160-mRNA-1:cds;Parent=Msa0877160-mRNA-1 |
| chr6_1 | CDS | 15892907 | 15893023 | 15892907 | ID=Msa0877160-mRNA-1:cds;Parent=Msa0877160-mRNA-1 |
| chr6_1 | CDS | 15892356 | 15892497 | 15892356 | ID=Msa0877160-mRNA-1:cds;Parent=Msa0877160-mRNA-1 |
| chr6_1 | CDS | 15889723 | 15890412 | 15889723 | ID=Msa0877160-mRNA-1:cds;Parent=Msa0877160-mRNA-1 |
| chr6_1 | three_prime_UTR | 15889252 | 15889722 | 15889252 | ID=Msa0877160-mRNA-1:three_prime_utr;Parent=Msa0877160-mRNA-1 |
| Gene Sequence |
| Protein sequence |
