Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0942390 | XP_024641380.1 | 85.172 | 816 | 17 | 4 | 1 | 712 | 13 | 828 | 0.0 | 1404 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0942390 | sp|Q8VYF9|SRGT1_ARATH | 57.783 | 803 | 207 | 10 | 8 | 700 | 21 | 801 | 0.0 | 928 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0428210 | Msa0942390 | 0.813350 | 2.676470e-51 | -8.615850e-47 |
| Msa0306400 | Msa0942390 | 0.971092 | 1.272150e-132 | -8.615850e-47 |
| Msa0877160 | Msa0942390 | 0.928300 | 3.506803e-92 | -8.615850e-47 |
| Msa0942380 | Msa0942390 | 0.938079 | 1.215988e-98 | -8.615850e-47 |
| Msa0942390 | Msa1043110 | 0.934672 | 2.809210e-96 | -8.615850e-47 |
| Msa0942390 | Msa1304790 | 0.800086 | 1.699339e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0942390 | MtrunA17_Chr6g0458451 | 85.172 | 816 | 17 | 4 | 1 | 712 | 13 | 828 | 0.0 | 1404 |
| Msa0942390 | MtrunA17_Chr7g0228921 | 62.500 | 800 | 181 | 8 | 1 | 695 | 13 | 798 | 0.0 | 1011 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0942390 | AT3G01720.1 | 57.783 | 803 | 207 | 10 | 8 | 700 | 21 | 801 | 0.0 | 928 |
Find 190 sgRNAs with CRISPR-Local
Find 614 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAAGGTTGTGACAATATTT+TGG | 0.175665 | 6_3:-17059140 | Msa0942390:CDS |
| ATCCGGTGGGTCTGGGAATT+TGG | 0.179408 | 6_3:+17054491 | None:intergenic |
| CCAAGTTCCCAAGGTAAAAT+TGG | 0.180353 | 6_3:+17059713 | None:intergenic |
| GTAGCAGGATTCACATATTT+TGG | 0.184669 | 6_3:+17058251 | None:intergenic |
| TACCAAGTTCTTTCAGGTTT+TGG | 0.193793 | 6_3:-17054173 | Msa0942390:CDS |
| GAATTTCAAGTGCTTCATTT+AGG | 0.208159 | 6_3:+17054397 | None:intergenic |
| AATTACCAATCTCCTGTTAA+TGG | 0.215038 | 6_3:+17057966 | None:intergenic |
| AGGCCTGTTGCAGCATATTA+TGG | 0.237439 | 6_3:-17059677 | Msa0942390:CDS |
| ATGAGATACCAAGTTCTTTC+AGG | 0.238205 | 6_3:-17054179 | Msa0942390:CDS |
| TTGCATGCCAGCTACCTTAT+TGG | 0.244694 | 6_3:-17056756 | Msa0942390:intron |
| GCTGCAATGACGAGGATTTA+AGG | 0.256840 | 6_3:-17058046 | Msa0942390:CDS |
| CTACCCCTGCAAACTCAAAT+TGG | 0.268189 | 6_3:-17053678 | Msa0942390:three_prime_UTR |
| CGACAAAGTTGGCGGGCTTT+TGG | 0.279044 | 6_3:-17059086 | Msa0942390:CDS |
| AACTCTTGATCAAGCTAATA+AGG | 0.288432 | 6_3:-17054463 | Msa0942390:CDS |
| AATGTCAGAATTACTTTGAT+TGG | 0.295167 | 6_3:-17062552 | Msa0942390:CDS |
| AACATAACTGGTGACATATA+CGG | 0.297840 | 6_3:-17058974 | Msa0942390:CDS |
| GAAGAGAAGAAGAATTATAA+AGG | 0.299151 | 6_3:-17062451 | Msa0942390:CDS |
| GCCATAGCATAGCAAATTTC+CGG | 0.300279 | 6_3:+17056643 | None:intergenic |
| GACCAGTTCCCTACACTAAA+TGG | 0.303871 | 6_3:+17058686 | None:intergenic |
| GTTGAGGGATCCGGTGGGTC+TGG | 0.314253 | 6_3:+17054483 | None:intergenic |
| ACTTGGCGTACAAACCTCTT+TGG | 0.316515 | 6_3:+17058589 | None:intergenic |
| AATTTCAAGTGCTTCATTTA+GGG | 0.316816 | 6_3:+17054398 | None:intergenic |
| AAAATCCAATTTGAGTTTGC+AGG | 0.326394 | 6_3:+17053673 | None:intergenic |
| AGTAACCTTGTAATATTTCC+AGG | 0.327180 | 6_3:+17058071 | None:intergenic |
| TCTTTGGGATAAGGAGGTTC+TGG | 0.330835 | 6_3:+17058605 | None:intergenic |
| TGAGATTCAGTGTTGGGAAT+TGG | 0.334660 | 6_3:-17054566 | Msa0942390:CDS |
| TTGGTTTGATGAATAGTTAT+AGG | 0.335582 | 6_3:-17062522 | Msa0942390:CDS |
| GAGATGTATGGATACTCTTT+TGG | 0.352878 | 6_3:-17058935 | Msa0942390:CDS |
| GCAGCTGGTTTATTAATTGC+TGG | 0.357175 | 6_3:+17057267 | None:intergenic |
| CAACTAAGAAGCCTTGTAAT+AGG | 0.364190 | 6_3:+17062481 | None:intergenic |
| CTATATTTGACGTTCGGTTC+AGG | 0.370561 | 6_3:+17054606 | None:intergenic |
| CTTGGCGTACAAACCTCTTT+GGG | 0.372919 | 6_3:+17058590 | None:intergenic |
| AATTTGAACTCCTTCTCTTA+AGG | 0.373154 | 6_3:+17053585 | None:intergenic |
| GACAAACCATTCAGAGGAAT+TGG | 0.375531 | 6_3:-17054241 | Msa0942390:CDS |
| AACCAGCTGCAGTTCTTCAT+TGG | 0.391693 | 6_3:-17057254 | Msa0942390:CDS |
| CCAACTTTGTCGCACAGCTC+TGG | 0.400653 | 6_3:+17059097 | None:intergenic |
| AATGCACACCATACTTTGAT+TGG | 0.401211 | 6_3:-17058136 | Msa0942390:CDS |
| GTTCGTTGTCACAACCAATA+AGG | 0.401734 | 6_3:+17056742 | None:intergenic |
| AAGCATGCAATCAGGATTCA+TGG | 0.403064 | 6_3:-17054037 | Msa0942390:CDS |
| ATGAGTCGACATCCATTAAC+AGG | 0.404518 | 6_3:-17057978 | Msa0942390:CDS |
| CACTTGCCAATTCCTCTGAA+TGG | 0.410444 | 6_3:+17054235 | None:intergenic |
| ATGGATTGAGATTCAGTGTT+GGG | 0.410758 | 6_3:-17054572 | Msa0942390:CDS |
| TTGGGATGTCTACTCATAGA+AGG | 0.417089 | 6_3:+17062400 | None:intergenic |
| AGTCTGAGAGTTCTGAGGTT+TGG | 0.418076 | 6_3:-17053815 | Msa0942390:three_prime_UTR |
| TTGAGGGATCCGGTGGGTCT+GGG | 0.419177 | 6_3:+17054484 | None:intergenic |
| CACTGGGCGACAAACATAAC+TGG | 0.424302 | 6_3:-17058986 | Msa0942390:CDS |
| AAGAGAAGAAGAATTATAAA+GGG | 0.425177 | 6_3:-17062450 | Msa0942390:CDS |
| GGTCATATTGATATTACAAA+AGG | 0.428237 | 6_3:-17062619 | Msa0942390:CDS |
| ATTACTGAGAAATTTGTAAA+GGG | 0.437198 | 6_3:-17053790 | Msa0942390:three_prime_UTR |
| TACCCATAATATGCTGCAAC+AGG | 0.437503 | 6_3:+17059674 | None:intergenic |
| CCAACTTTGTCGCAAGCCTC+TGG | 0.438300 | 6_3:+17056696 | None:intergenic |
| TTGAATTCCCACGGTGTGAT+TGG | 0.438756 | 6_3:+17057165 | None:intergenic |
| ACAGTTTGCCAATCAAAGTA+TGG | 0.439045 | 6_3:+17058128 | None:intergenic |
| AAAACTCTATATTTGACGTT+CGG | 0.446196 | 6_3:+17054600 | None:intergenic |
| GAATTGTTTATGAATGCAAC+CGG | 0.448605 | 6_3:-17058634 | Msa0942390:CDS |
| GAATTATAAAGGGATGCATT+TGG | 0.450756 | 6_3:-17062440 | Msa0942390:CDS |
| AGTGGAACTTCAAGGGAAAT+CGG | 0.451336 | 6_3:-17054306 | Msa0942390:CDS |
| CCCTCACGAGGGATATAACC+TGG | 0.452694 | 6_3:+17058740 | None:intergenic |
| GAGGATTTAAGGAAGTATAA+AGG | 0.453713 | 6_3:-17058035 | Msa0942390:CDS |
| CCCTCGTGAGGGAATTGAAC+CGG | 0.454874 | 6_3:-17058729 | Msa0942390:CDS |
| AACCGGTTCTTCTTCACTAC+GGG | 0.454993 | 6_3:-17058712 | Msa0942390:CDS |
| TTAGCTTGATCAAGAGTTGA+GGG | 0.463459 | 6_3:+17054468 | None:intergenic |
| AATGTGTAGGAGCCAGATCT+TGG | 0.463486 | 6_3:+17058012 | None:intergenic |
| GAAGTATAAAGGCCAAGATC+TGG | 0.467544 | 6_3:-17058024 | Msa0942390:CDS |
| CAGAAGAAAGTGGAACTTCA+AGG | 0.468519 | 6_3:-17054314 | Msa0942390:CDS |
| ATCTCATCTTTCTGAACACT+TGG | 0.468861 | 6_3:+17054195 | None:intergenic |
| GGCCTGTTGCAGCATATTAT+GGG | 0.468926 | 6_3:-17059676 | Msa0942390:intron |
| CAAGTTCCCAAGGTAAAATT+GGG | 0.469455 | 6_3:+17059714 | None:intergenic |
| AGCCCGTAGTGAAGAAGAAC+CGG | 0.470509 | 6_3:+17058710 | None:intergenic |
| ACATAACTGGTGACATATAC+GGG | 0.471219 | 6_3:-17058973 | Msa0942390:CDS |
| GGATGAAACATCATAGTAGA+AGG | 0.471889 | 6_3:-17054065 | Msa0942390:CDS |
| TTTCTAAAACAGAAGAAGTA+CGG | 0.474428 | 6_3:-17059021 | Msa0942390:CDS |
| TTTATTGCAGGTATTACAGT+TGG | 0.474686 | 6_3:-17058438 | Msa0942390:intron |
| ATAGAAGGAACTTGAAAAGT+AGG | 0.474885 | 6_3:+17062415 | None:intergenic |
| GGATGGATCAGTGAGATGTA+TGG | 0.475233 | 6_3:-17058947 | Msa0942390:CDS |
| AGGAGAAGAAGCATGCAATC+AGG | 0.477396 | 6_3:-17054045 | Msa0942390:CDS |
| TACCATTTAGTGTAGGGAAC+TGG | 0.477535 | 6_3:-17058688 | Msa0942390:CDS |
| GTACAAACCTCTTTGGGATA+AGG | 0.477585 | 6_3:+17058596 | None:intergenic |
| TGCATAAACATTATAAATGA+AGG | 0.478681 | 6_3:-17058371 | Msa0942390:CDS |
| GTCATATTGATATTACAAAA+GGG | 0.482231 | 6_3:-17062618 | Msa0942390:CDS |
| TTGATGTGGTTAACAAATGT+TGG | 0.485720 | 6_3:-17054515 | Msa0942390:CDS |
| TTCTCCGGGTCCGGGCGTAA+AGG | 0.486458 | 6_3:-17053949 | Msa0942390:three_prime_UTR |
| ACCCAAAACCTGAAAGAACT+TGG | 0.492062 | 6_3:+17054171 | None:intergenic |
| TTTCCATCATCACGATCAAC+GGG | 0.493381 | 6_3:+17058194 | None:intergenic |
| TGGGAACTTGGTGCAGAGAA+AGG | 0.495088 | 6_3:-17059701 | Msa0942390:CDS |
| AGCCAATGAAGAACTGCAGC+TGG | 0.495177 | 6_3:+17057252 | None:intergenic |
| GACATCCATTAACAGGAGAT+TGG | 0.499712 | 6_3:-17057971 | Msa0942390:intron |
| TATTACTGAGAAATTTGTAA+AGG | 0.503017 | 6_3:-17053791 | Msa0942390:three_prime_UTR |
| AGAAGAAGTACGGGAAGATA+AGG | 0.503586 | 6_3:-17059011 | Msa0942390:CDS |
| TTCCATATTGATATCAAAAG+AGG | 0.505001 | 6_3:-17054346 | Msa0942390:CDS |
| TTTCGTTTGAGTGGACAGCC+TGG | 0.507263 | 6_3:-17058089 | Msa0942390:CDS |
| TACTTTGATTGGCAAACTGT+TGG | 0.507360 | 6_3:-17062541 | Msa0942390:CDS |
| AAACTCGCTCACCATGATGA+TGG | 0.507418 | 6_3:-17058656 | Msa0942390:CDS |
| GATGAGAAAACAGAAGAAAG+TGG | 0.515505 | 6_3:-17054324 | Msa0942390:CDS |
| TTCTAAAACAGAAGAAGTAC+GGG | 0.516719 | 6_3:-17059020 | Msa0942390:CDS |
| TATTACAAAAGGGGCAAAGA+AGG | 0.516819 | 6_3:-17062608 | Msa0942390:CDS |
| TTCGGTTCAGGAACATATCC+CGG | 0.517083 | 6_3:+17054618 | None:intergenic |
| CCAGAGCTGTGCGACAAAGT+TGG | 0.519233 | 6_3:-17059097 | Msa0942390:CDS |
| TCCGGAAATTTGCTATGCTA+TGG | 0.523585 | 6_3:-17056644 | Msa0942390:CDS |
| TGATCAAGAGTTGAGGGATC+CGG | 0.525509 | 6_3:+17054474 | None:intergenic |
| CTCACCTTTACGCCCGGACC+CGG | 0.525557 | 6_3:+17053945 | None:intergenic |
| AAGGGGCAAAGAAGGTATCA+TGG | 0.529389 | 6_3:-17062600 | Msa0942390:CDS |
| AAATCCAATTTGAGTTTGCA+GGG | 0.529688 | 6_3:+17053674 | None:intergenic |
| CTTTCCATCATCACGATCAA+CGG | 0.532984 | 6_3:+17058193 | None:intergenic |
| CCCGGACCCGGAGAATGAAA+AGG | 0.538056 | 6_3:+17053957 | None:intergenic |
| CAATGAGATACTGATATACC+CGG | 0.538068 | 6_3:-17054637 | Msa0942390:CDS |
| TAATAAATAGTCCTCGCCTT+CGG | 0.538311 | 6_3:+17058402 | None:intergenic |
| GATGAACTCACCTTTACGCC+CGG | 0.538724 | 6_3:+17053939 | None:intergenic |
| GGCCAAATTCCCAGACCCAC+CGG | 0.542009 | 6_3:-17054493 | Msa0942390:CDS |
| GGAATTGGCAAGTGTTCAGA+AGG | 0.542493 | 6_3:-17054226 | Msa0942390:CDS |
| TTCTCTGCACCAAGTTCCCA+AGG | 0.542674 | 6_3:+17059704 | None:intergenic |
| ATGGTTTGTCACGACACGAT+TGG | 0.543260 | 6_3:+17054254 | None:intergenic |
| AGCTGTGCGACAAAGTTGGC+GGG | 0.543694 | 6_3:-17059093 | Msa0942390:CDS |
| TGATGTGGTTAACAAATGTT+GGG | 0.543907 | 6_3:-17054514 | Msa0942390:CDS |
| CATAAACAATTCCATCATCA+TGG | 0.544004 | 6_3:+17058645 | None:intergenic |
| TACTGAATCAATACTTGCAT+CGG | 0.544833 | 6_3:+17054278 | None:intergenic |
| CCAGAGGCTTGCGACAAAGT+TGG | 0.545670 | 6_3:-17056696 | Msa0942390:CDS |
| GAGCTGTGCGACAAAGTTGG+CGG | 0.546257 | 6_3:-17059094 | Msa0942390:CDS |
| TCGGTTCAGGAACATATCCC+GGG | 0.548133 | 6_3:+17054619 | None:intergenic |
| AGAACCTCCTTATCCCAAAG+AGG | 0.550034 | 6_3:-17058603 | Msa0942390:intron |
| CAATTTGAGTTTGCAGGGGT+AGG | 0.556044 | 6_3:+17053679 | None:intergenic |
| AGAAGGAGTTCAAATTTCAT+CGG | 0.556967 | 6_3:-17053578 | Msa0942390:three_prime_UTR |
| TTTGACTTGACCTTAAGAGA+AGG | 0.557686 | 6_3:-17053595 | Msa0942390:three_prime_UTR |
| AACTTGGTGCAGAGAAAGGA+AGG | 0.557758 | 6_3:-17059697 | Msa0942390:CDS |
| AACAACCTGGTCCTATTACA+AGG | 0.558589 | 6_3:-17062492 | Msa0942390:CDS |
| AGCAATGGACGCGACCGGCA+CGG | 0.562849 | 6_3:-17054012 | Msa0942390:CDS |
| TTATGCATATAGATGATCTC+CGG | 0.563181 | 6_3:-17056662 | Msa0942390:CDS |
| GGAGCTTCGACAAAGCAGAC+TGG | 0.563412 | 6_3:-17054545 | Msa0942390:CDS |
| GTGACATATACGGGAAAGGA+TGG | 0.565093 | 6_3:-17058964 | Msa0942390:CDS |
| TGGAAAGCAATGGACGCGAC+CGG | 0.565743 | 6_3:-17054017 | Msa0942390:CDS |
| CTACTACAGCATGGAGCGAA+TGG | 0.567967 | 6_3:-17058344 | Msa0942390:CDS |
| GAACCGGTTCTTCTTCACTA+CGG | 0.568198 | 6_3:-17058713 | Msa0942390:CDS |
| AGAAGAAAGTGGAACTTCAA+GGG | 0.569929 | 6_3:-17054313 | Msa0942390:CDS |
| TACTTTGATTGGCAAACTGT+AGG | 0.571418 | 6_3:-17058125 | Msa0942390:CDS |
| ACGGGCTACCATTTAGTGTA+GGG | 0.573227 | 6_3:-17058694 | Msa0942390:CDS |
| ATTAGCTTGATCAAGAGTTG+AGG | 0.583296 | 6_3:+17054467 | None:intergenic |
| TATGGATTGAGATTCAGTGT+TGG | 0.586229 | 6_3:-17054573 | Msa0942390:CDS |
| TACGGGAAGATAAGGAACAC+TGG | 0.590462 | 6_3:-17059003 | Msa0942390:CDS |
| ATACAAGATTTAATTGTCGT+AGG | 0.590842 | 6_3:+17053650 | None:intergenic |
| CAAACCTCTTTGGGATAAGG+AGG | 0.591702 | 6_3:+17058599 | None:intergenic |
| CTTTGTCGCAAGCCTCTGGA+TGG | 0.593116 | 6_3:+17056700 | None:intergenic |
| GAGGCTTGCGACAAAGTTGG+TGG | 0.593292 | 6_3:-17056693 | Msa0942390:CDS |
| TGCTATGCAGGGATCGCACA+AGG | 0.593647 | 6_3:-17053903 | Msa0942390:three_prime_UTR |
| AAGGAGGTTCTGGAAAGAGC+CGG | 0.595528 | 6_3:+17058615 | None:intergenic |
| AGAAGCCTTGTAATAGGACC+AGG | 0.600804 | 6_3:+17062487 | None:intergenic |
| AATCAACATCACGGCCGTGC+CGG | 0.603120 | 6_3:+17053998 | None:intergenic |
| TCAGGATTCATGGAAAGCAA+TGG | 0.603546 | 6_3:-17054027 | Msa0942390:CDS |
| TCATATTGATATTACAAAAG+GGG | 0.604366 | 6_3:-17062617 | Msa0942390:CDS |
| GTCATAGAAGACGAGGAACA+AGG | 0.606626 | 6_3:-17054086 | Msa0942390:CDS |
| ATTGGCAAGTGTTCAGAAGG+AGG | 0.606869 | 6_3:-17054223 | Msa0942390:CDS |
| AAACCTCAGAACTCTCAGAC+TGG | 0.608730 | 6_3:+17053817 | None:intergenic |
| AAGCCAGTCTGAGAGTTCTG+AGG | 0.609637 | 6_3:-17053820 | Msa0942390:three_prime_UTR |
| CCCAGGTTATATCCCTCGTG+AGG | 0.611608 | 6_3:-17058741 | Msa0942390:CDS |
| TCGAAGGTCACTGATATGAA+AGG | 0.614152 | 6_3:+17059063 | None:intergenic |
| TCAAGAGTTGAGGGATCCGG+TGG | 0.615744 | 6_3:+17054477 | None:intergenic |
| CCCAAGGTAAAATTGGGCCA+CGG | 0.615795 | 6_3:+17059720 | None:intergenic |
| CTTGTTCACAGATAGGACTT+CGG | 0.617243 | 6_3:-17058793 | Msa0942390:intron |
| GAAGGTCTTCTACTACAGCA+TGG | 0.622146 | 6_3:-17058353 | Msa0942390:CDS |
| ATGGTTGCCCTAAGCCAGCA+TGG | 0.624220 | 6_3:-17058325 | Msa0942390:CDS |
| TACGGGCTACCATTTAGTGT+AGG | 0.626647 | 6_3:-17058695 | Msa0942390:CDS |
| ACTGGTGACATATACGGGAA+AGG | 0.631175 | 6_3:-17058968 | Msa0942390:CDS |
| TATAGGAAAGCTAAACAACC+TGG | 0.631459 | 6_3:-17062505 | Msa0942390:CDS |
| GACAGCCTGGAAATATTACA+AGG | 0.634109 | 6_3:-17058076 | Msa0942390:CDS |
| GATAACTTGATGCTCTACCC+AGG | 0.634601 | 6_3:-17058758 | Msa0942390:CDS |
| ATCAATATGGAATCAGCACT+AGG | 0.635467 | 6_3:+17054357 | None:intergenic |
| AATGGATGTCGACTCATCGA+GGG | 0.640382 | 6_3:+17057984 | None:intergenic |
| ACGGGAAGATAAGGAACACT+GGG | 0.640874 | 6_3:-17059002 | Msa0942390:CDS |
| GACATGCTTAGCATAGAATG+TGG | 0.641341 | 6_3:-17054426 | Msa0942390:CDS |
| ACCGGTTCAATTCCCTCACG+AGG | 0.646082 | 6_3:+17058728 | None:intergenic |
| TTGTTTACAAATCAACATCA+CGG | 0.647518 | 6_3:+17053989 | None:intergenic |
| CCAGGTTATATCCCTCGTGA+GGG | 0.652167 | 6_3:-17058740 | Msa0942390:CDS |
| TGGAACTTGACGCTAACCGA+AGG | 0.659239 | 6_3:-17058418 | Msa0942390:CDS |
| ATCGAGGGAACATAATGTGT+AGG | 0.661006 | 6_3:+17057999 | None:intergenic |
| GTTACTGAGCTGCAATGACG+AGG | 0.661450 | 6_3:-17058054 | Msa0942390:CDS |
| TAATGGATGTCGACTCATCG+AGG | 0.663562 | 6_3:+17057983 | None:intergenic |
| GACGCAGACATGATTATCCG+TGG | 0.665609 | 6_3:-17059737 | Msa0942390:CDS |
| CTTGACGCTAACCGAAGGCG+AGG | 0.669541 | 6_3:-17058413 | Msa0942390:CDS |
| TGTCGTGACAAACCATTCAG+AGG | 0.670388 | 6_3:-17054247 | Msa0942390:CDS |
| CGACAAAGCAGACTGGCGAG+AGG | 0.681943 | 6_3:-17054538 | Msa0942390:CDS |
| ATGGCTGCATAAAACAGAGG+AGG | 0.684775 | 6_3:-17056625 | Msa0942390:intron |
| CCTCACGAGGGATATAACCT+GGG | 0.688017 | 6_3:+17058741 | None:intergenic |
| AATGAGATACTGATATACCC+GGG | 0.688331 | 6_3:-17054636 | Msa0942390:CDS |
| GATGCTGATATGATCATGAG+AGG | 0.690513 | 6_3:-17057189 | Msa0942390:CDS |
| TGTTCGGGTCATAGAAGACG+AGG | 0.693244 | 6_3:-17054093 | Msa0942390:CDS |
| CAAGAGTTGAGGGATCCGGT+GGG | 0.697089 | 6_3:+17054478 | None:intergenic |
| GCTATGGCTGCATAAAACAG+AGG | 0.699820 | 6_3:-17056628 | Msa0942390:CDS |
| AGACTGGCGAGAGGTTGATG+TGG | 0.700331 | 6_3:-17054529 | Msa0942390:CDS |
| CCGGTTCAATTCCCTCACGA+GGG | 0.704114 | 6_3:+17058729 | None:intergenic |
| AATCCAATTTGAGTTTGCAG+GGG | 0.706048 | 6_3:+17053675 | None:intergenic |
| ATTACACACTAGCCATCCAG+AGG | 0.725347 | 6_3:-17056712 | Msa0942390:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTAGTTTTGATTTTTT+AGG | - | chr6_3:17054454-17054473 | Msa0942390:CDS | 10.0% |
| !! | ATTAAAAAAAAATGATTTAG+AGG | + | chr6_3:17058584-17058603 | None:intergenic | 10.0% |
| !!! | TATTTTTCTTTTCTAAATTA+AGG | + | chr6_3:17060231-17060250 | None:intergenic | 10.0% |
| !! | CTATTTAATGATAAAAAAAA+GGG | + | chr6_3:17061298-17061317 | None:intergenic | 10.0% |
| !! | ACTATTTAATGATAAAAAAA+AGG | + | chr6_3:17061299-17061318 | None:intergenic | 10.0% |
| !!! | TTTATGTATGTTTTTGAATT+TGG | - | chr6_3:17054010-17054029 | Msa0942390:CDS | 15.0% |
| !!! | CTTTTTTTGTTTGTTATTTT+TGG | - | chr6_3:17054716-17054735 | Msa0942390:intron | 15.0% |
| !! | TCTATGTAATTACAATAAAT+AGG | - | chr6_3:17055216-17055235 | Msa0942390:intron | 15.0% |
| !! | CTATGTAATTACAATAAATA+GGG | - | chr6_3:17055217-17055236 | Msa0942390:intron | 15.0% |
| !!! | AATTTATATTTTGCTATCTT+AGG | - | chr6_3:17055387-17055406 | Msa0942390:intron | 15.0% |
| !! | TTCAATACTATAATGTAAAT+TGG | - | chr6_3:17055702-17055721 | Msa0942390:intron | 15.0% |
| !! | TCAATACTATAATGTAAATT+GGG | - | chr6_3:17055703-17055722 | Msa0942390:intron | 15.0% |
| !! | AAATCCTTGTAAATAAATTA+TGG | - | chr6_3:17055772-17055791 | Msa0942390:intron | 15.0% |
| !!! | TTTGACTTTATTTTATCTTT+TGG | + | chr6_3:17056635-17056654 | None:intergenic | 15.0% |
| !!! | GGTTTTGTTAAAATAAAAAA+TGG | - | chr6_3:17056842-17056861 | Msa0942390:intron | 15.0% |
| !!! | TTTAAAAAGTAAATCTTTTG+CGG | - | chr6_3:17057859-17057878 | Msa0942390:intron | 15.0% |
| !!! | AAAATCATTTTCTTAAGAAA+AGG | + | chr6_3:17058516-17058535 | None:intergenic | 15.0% |
| !!! | TAAGAAAATGATTTTCATTA+TGG | - | chr6_3:17058521-17058540 | Msa0942390:intron | 15.0% |
| !! | AAATGATCATAATCATAAAT+TGG | - | chr6_3:17060471-17060490 | Msa0942390:intron | 15.0% |
| !!! | AAATATAGAGTTTTTCATTA+TGG | - | chr6_3:17061553-17061572 | Msa0942390:intron | 15.0% |
| !!! | TTTTGTATCTAAAAATCATA+AGG | - | chr6_3:17062413-17062432 | Msa0942390:CDS | 15.0% |
| !! | GTCATATTGATATTACAAAA+GGG | - | chr6_3:17053526-17053545 | Msa0942390:three_prime_UTR | 20.0% |
| !! | TCATATTGATATTACAAAAG+GGG | - | chr6_3:17053527-17053546 | Msa0942390:three_prime_UTR | 20.0% |
| !! | AAGAGAAGAAGAATTATAAA+GGG | - | chr6_3:17053694-17053713 | Msa0942390:three_prime_UTR | 20.0% |
| !! | TGTTCATTTATTATATGTCT+AGG | - | chr6_3:17054340-17054359 | Msa0942390:CDS | 20.0% |
| !! | TATTTAAAGAGATGTTAATG+TGG | - | chr6_3:17054525-17054544 | Msa0942390:CDS | 20.0% |
| !! | CAAATCTAGTACAAAATTTA+AGG | + | chr6_3:17055148-17055167 | None:intergenic | 20.0% |
| !! | GGCTAAATATATTGTAAATT+GGG | - | chr6_3:17055178-17055197 | Msa0942390:intron | 20.0% |
| !! | ATAATTGAGAAAATAGAAGT+TGG | + | chr6_3:17055285-17055304 | None:intergenic | 20.0% |
| !! | TTAAAATGTATGTGCAAATA+TGG | - | chr6_3:17055611-17055630 | Msa0942390:intron | 20.0% |
| !! | AGAACCATAATTTATTTACA+AGG | + | chr6_3:17055779-17055798 | None:intergenic | 20.0% |
| !! | TTGTTTGTATAGTATTTCAT+AGG | - | chr6_3:17055991-17056010 | Msa0942390:intron | 20.0% |
| !!! | TTTTTGTTTGTGTAGTATTT+TGG | - | chr6_3:17056150-17056169 | Msa0942390:intron | 20.0% |
| !!! | AGCTTTATATACAAACTTTT+TGG | + | chr6_3:17056245-17056264 | None:intergenic | 20.0% |
| !!! | ATGTTCAGTTTTTAATTTTC+TGG | - | chr6_3:17056934-17056953 | Msa0942390:intron | 20.0% |
| !! | ATAATGAACGTGTTAATTTA+AGG | + | chr6_3:17057257-17057276 | None:intergenic | 20.0% |
| !!! | AGAAAAATTTCTCCATTTTT+TGG | - | chr6_3:17057608-17057627 | Msa0942390:intron | 20.0% |
| !! | AGTATATATAGACCAAAAAA+TGG | + | chr6_3:17057623-17057642 | None:intergenic | 20.0% |
| !! | AATATATATGCACAGAAATA+TGG | - | chr6_3:17057644-17057663 | Msa0942390:intron | 20.0% |
| !! | TGCATAAACATTATAAATGA+AGG | - | chr6_3:17057773-17057792 | Msa0942390:intron | 20.0% |
| !! | TAAGAAAAATTGTAACATAC+AGG | + | chr6_3:17058356-17058375 | None:intergenic | 20.0% |
| !! | TAATGATGCTACAAAATTTA+AGG | + | chr6_3:17058621-17058640 | None:intergenic | 20.0% |
| !!! | TAGATATCTTAAGCTAATTT+TGG | - | chr6_3:17058649-17058668 | Msa0942390:CDS | 20.0% |
| !!! | TTTTTAGCATATAGTCAAAA+TGG | + | chr6_3:17058824-17058843 | None:intergenic | 20.0% |
| !! | TGGTTTAAATTAACATTAAC+AGG | + | chr6_3:17059075-17059094 | None:intergenic | 20.0% |
| !!! | TAAAATGTTTCTAAATCTCA+AGG | + | chr6_3:17060202-17060221 | None:intergenic | 20.0% |
| !! | TATTACTGAGAAATTTGTAA+AGG | - | chr6_3:17062353-17062372 | Msa0942390:intron | 20.0% |
| !! | ATTACTGAGAAATTTGTAAA+GGG | - | chr6_3:17062354-17062373 | Msa0942390:intron | 20.0% |
| ! | GGTCATATTGATATTACAAA+AGG | - | chr6_3:17053525-17053544 | Msa0942390:three_prime_UTR | 25.0% |
| ! | AATGTCAGAATTACTTTGAT+TGG | - | chr6_3:17053592-17053611 | Msa0942390:three_prime_UTR | 25.0% |
| !! | TTGGTTTGATGAATAGTTAT+AGG | - | chr6_3:17053622-17053641 | Msa0942390:three_prime_UTR | 25.0% |
| ! | GAAGAGAAGAAGAATTATAA+AGG | - | chr6_3:17053693-17053712 | Msa0942390:three_prime_UTR | 25.0% |
| ! | TTCATTTATTATCTGTGTCT+AGG | - | chr6_3:17053866-17053885 | Msa0942390:three_prime_UTR | 25.0% |
| ! | TATGTAAAGTGAAGTTAATG+TGG | - | chr6_3:17054064-17054083 | Msa0942390:CDS | 25.0% |
| !!! | AAGTGCTGTTAATTTTAATG+TGG | - | chr6_3:17054123-17054142 | Msa0942390:CDS | 25.0% |
| !!! | AATTTTAATGTGGTTGACTT+TGG | - | chr6_3:17054133-17054152 | Msa0942390:CDS | 25.0% |
| ! | TTGAATTGTGAAATGTAGAT+TGG | - | chr6_3:17054490-17054509 | Msa0942390:CDS | 25.0% |
| !!! | AATTTTAACGTGGTTTACTT+AGG | - | chr6_3:17054594-17054613 | Msa0942390:CDS | 25.0% |
| ! | ATATGTGAAGTGATATTGTT+AGG | - | chr6_3:17054636-17054655 | Msa0942390:CDS | 25.0% |
| !!! | GATTTTAATGTGATTGACTT+TGG | - | chr6_3:17054822-17054841 | Msa0942390:intron | 25.0% |
| !!! | TCAAGAATGTGACATTTTTT+TGG | + | chr6_3:17055018-17055037 | None:intergenic | 25.0% |
| !! | TACTAGATTTGTGTTTTCAA+CGG | - | chr6_3:17055157-17055176 | Msa0942390:intron | 25.0% |
| ! | CGGCTAAATATATTGTAAAT+TGG | - | chr6_3:17055177-17055196 | Msa0942390:intron | 25.0% |
| !!! | TTTTTGAGTGTTTTCAATGT+TGG | - | chr6_3:17055468-17055487 | Msa0942390:intron | 25.0% |
| ! | ATCGTAATTACATAGAATCA+GGG | + | chr6_3:17055737-17055756 | None:intergenic | 25.0% |
| ! | TCTATGTAATTACGATCATA+AGG | - | chr6_3:17055741-17055760 | Msa0942390:intron | 25.0% |
| ! | CTATGTAATTACGATCATAA+GGG | - | chr6_3:17055742-17055761 | Msa0942390:intron | 25.0% |
| !! | GAAGCATCATATTTGTTAAA+GGG | + | chr6_3:17056218-17056237 | None:intergenic | 25.0% |
| !! | TGAAGCATCATATTTGTTAA+AGG | + | chr6_3:17056219-17056238 | None:intergenic | 25.0% |
| ! | AATTTCTTACTCGTTTCTTA+CGG | - | chr6_3:17056499-17056518 | Msa0942390:intron | 25.0% |
| !! | TTTTACTGAATATCACTCTT+TGG | + | chr6_3:17056528-17056547 | None:intergenic | 25.0% |
| ! | GTAAGAACTAATAGCATAAA+CGG | - | chr6_3:17056572-17056591 | Msa0942390:intron | 25.0% |
| ! | ATAAACGGTTATCATATAAG+TGG | - | chr6_3:17056587-17056606 | Msa0942390:intron | 25.0% |
| !! | AAAAGGTTGTGACAATATTT+TGG | - | chr6_3:17057004-17057023 | Msa0942390:intron | 25.0% |
| !!! | TTTCTAAAACAGAAGAAGTA+CGG | - | chr6_3:17057123-17057142 | Msa0942390:intron | 25.0% |
| ! | TTTCATGCTATAAGTATACT+TGG | + | chr6_3:17057575-17057594 | None:intergenic | 25.0% |
| ! | TAACAAACGAATGTAAAACT+CGG | + | chr6_3:17058388-17058407 | None:intergenic | 25.0% |
| ! | AACAAACACATAATAGTTTC+TGG | - | chr6_3:17058546-17058565 | Msa0942390:intron | 25.0% |
| ! | AATTGTATAATAGTTTCGCT+TGG | - | chr6_3:17058764-17058783 | Msa0942390:CDS | 25.0% |
| !! | AGTTCTTCTGTTTTCATTTT+AGG | - | chr6_3:17058851-17058870 | Msa0942390:intron | 25.0% |
| ! | CATTATGCAAGAAATATAAC+AGG | - | chr6_3:17059559-17059578 | Msa0942390:intron | 25.0% |
| ! | AACAAAATAGAGAAAAACAG+AGG | + | chr6_3:17059834-17059853 | None:intergenic | 25.0% |
| !! | TTTTTCTCTATTTTGTTGCT+TGG | - | chr6_3:17059837-17059856 | Msa0942390:intron | 25.0% |
| ! | AGATAATTGAGGAAAAACAA+AGG | + | chr6_3:17059937-17059956 | None:intergenic | 25.0% |
| ! | AAATAGATAGAGAAAACAGA+GGG | + | chr6_3:17059988-17060007 | None:intergenic | 25.0% |
| ! | TAAACATATTAGGGTATGTT+TGG | + | chr6_3:17060289-17060308 | None:intergenic | 25.0% |
| ! | ACAGAGTGATAAACATATTA+GGG | + | chr6_3:17060298-17060317 | None:intergenic | 25.0% |
| ! | TACAGAGTGATAAACATATT+AGG | + | chr6_3:17060299-17060318 | None:intergenic | 25.0% |
| ! | TTCTATCTCCATATTAAGAA+CGG | - | chr6_3:17060730-17060749 | Msa0942390:intron | 25.0% |
| ! | ATTGTTGAATTCCTAATACT+AGG | + | chr6_3:17061270-17061289 | None:intergenic | 25.0% |
| ! | AAAACTCTATATTTGACGTT+CGG | + | chr6_3:17061547-17061566 | None:intergenic | 25.0% |
| !! | AATTTCAAGTGCTTCATTTA+GGG | + | chr6_3:17061749-17061768 | None:intergenic | 25.0% |
| ! | TTCCATATTGATATCAAAAG+AGG | - | chr6_3:17061798-17061817 | Msa0942390:intron | 25.0% |
| !! | ATCCTCTTTTGATATCAATA+TGG | + | chr6_3:17061803-17061822 | None:intergenic | 25.0% |
| ! | TTGTTTACAAATCAACATCA+CGG | + | chr6_3:17062158-17062177 | None:intergenic | 25.0% |
| ! | ATACAAGATTTAATTGTCGT+AGG | + | chr6_3:17062497-17062516 | None:intergenic | 25.0% |
| GAATTATAAAGGGATGCATT+TGG | - | chr6_3:17053704-17053723 | Msa0942390:three_prime_UTR | 30.0% | |
| ATAGAAGGAACTTGAAAAGT+AGG | + | chr6_3:17053732-17053751 | None:intergenic | 30.0% | |
| ! | ATTTAGATTGAAAGCGTGTT+CGG | - | chr6_3:17053802-17053821 | Msa0942390:three_prime_UTR | 30.0% |
| TTGGATTGTGAAATGTAGAT+TGG | - | chr6_3:17054029-17054048 | Msa0942390:CDS | 30.0% | |
| !! | GAAATGTAGATTGGTTTATG+CGG | - | chr6_3:17054038-17054057 | Msa0942390:CDS | 30.0% |
| TTGACTTTAGTAGATTGGTA+TGG | - | chr6_3:17054087-17054106 | Msa0942390:CDS | 30.0% | |
| TGACTTTAGTAGATTGGTAT+GGG | - | chr6_3:17054088-17054107 | Msa0942390:CDS | 30.0% | |
| !! | TAGATTGGTTTGTGTTAATG+TGG | - | chr6_3:17054156-17054175 | Msa0942390:CDS | 30.0% |
| GTTTGTGTTAATGTGGTATT+TGG | - | chr6_3:17054163-17054182 | Msa0942390:CDS | 30.0% | |
| ! | ATTTACATTGAAAGCGTGTT+CGG | - | chr6_3:17054279-17054298 | Msa0942390:CDS | 30.0% |
| !! | TGACTTTAGTAGATTGGTTT+CGG | - | chr6_3:17054549-17054568 | Msa0942390:CDS | 30.0% |
| !! | AAGTGCTGTTAATTTTAACG+TGG | - | chr6_3:17054584-17054603 | Msa0942390:CDS | 30.0% |
| ATTGTTAGGTATAGACACTT+CGG | - | chr6_3:17054650-17054669 | Msa0942390:CDS | 30.0% | |
| TTTAACCATTGACAAGTACA+TGG | + | chr6_3:17054745-17054764 | None:intergenic | 30.0% | |
| AGATGTGAAGTGTATTAATG+TGG | - | chr6_3:17054869-17054888 | Msa0942390:intron | 30.0% | |
| TTGGATAAGCAAATGTTAGT+GGG | + | chr6_3:17054999-17055018 | None:intergenic | 30.0% | |
| TTTGGATAAGCAAATGTTAG+TGG | + | chr6_3:17055000-17055019 | None:intergenic | 30.0% | |
| !!! | CTTAGGAATGTTTTTGAGTT+CGG | - | chr6_3:17055404-17055423 | Msa0942390:intron | 30.0% |
| ACTGTGAAATGATGTTAATG+AGG | - | chr6_3:17055427-17055446 | Msa0942390:intron | 30.0% | |
| !! | GTGTTTTCAATGTTGGTTAT+TGG | - | chr6_3:17055475-17055494 | Msa0942390:intron | 30.0% |
| GATCGTAATTACATAGAATC+AGG | + | chr6_3:17055738-17055757 | None:intergenic | 30.0% | |
| CTAAACTATCAGTGTTACAT+AGG | + | chr6_3:17055862-17055881 | None:intergenic | 30.0% | |
| CACTGATAGTTTAGATTTGA+TGG | - | chr6_3:17055868-17055887 | Msa0942390:intron | 30.0% | |
| ! | TGTTAAAGGGACATTTTAAG+CGG | + | chr6_3:17056205-17056224 | None:intergenic | 30.0% |
| ! | TATTTCTCATTTTGCTCTCT+CGG | + | chr6_3:17056279-17056298 | None:intergenic | 30.0% |
| ! | TAAATTTTTGTCCTCTATGC+AGG | - | chr6_3:17056297-17056316 | Msa0942390:intron | 30.0% |
| AGGATGCAAAAAATGTTGAT+TGG | - | chr6_3:17056372-17056391 | Msa0942390:intron | 30.0% | |
| ! | GGATGCAAAAAATGTTGATT+GGG | - | chr6_3:17056373-17056392 | Msa0942390:intron | 30.0% |
| AGTCAAACTCTTCTCATATA+TGG | - | chr6_3:17056648-17056667 | Msa0942390:CDS | 30.0% | |
| AGTAAGCTGAAAACAACTTA+TGG | - | chr6_3:17056711-17056730 | Msa0942390:CDS | 30.0% | |
| !! | TTGCTTTGAAGTTATGAAAC+TGG | - | chr6_3:17056872-17056891 | Msa0942390:intron | 30.0% |
| !! | TGCTTTGAAGTTATGAAACT+GGG | - | chr6_3:17056873-17056892 | Msa0942390:intron | 30.0% |
| AAGTACCTGGACAAAAAAAT+TGG | + | chr6_3:17056984-17057003 | None:intergenic | 30.0% | |
| ! | TTTTTGTCCAGGTACTTAAA+AGG | - | chr6_3:17056987-17057006 | Msa0942390:intron | 30.0% |
| !! | TTCTAAAACAGAAGAAGTAC+GGG | - | chr6_3:17057124-17057143 | Msa0942390:intron | 30.0% |
| AACATAACTGGTGACATATA+CGG | - | chr6_3:17057170-17057189 | Msa0942390:intron | 30.0% | |
| GAACAAGAGAGAAAACAAAA+GGG | + | chr6_3:17057338-17057357 | None:intergenic | 30.0% | |
| TGAACAAGAGAGAAAACAAA+AGG | + | chr6_3:17057339-17057358 | None:intergenic | 30.0% | |
| CATAAACAATTCCATCATCA+TGG | + | chr6_3:17057502-17057521 | None:intergenic | 30.0% | |
| GAATTGTTTATGAATGCAAC+CGG | - | chr6_3:17057510-17057529 | Msa0942390:intron | 30.0% | |
| ! | TTTCTAAGTTTTGCTGATGT+TGG | - | chr6_3:17057676-17057695 | Msa0942390:intron | 30.0% |
| ! | GTTGGAAATCATTTTATTGC+AGG | - | chr6_3:17057694-17057713 | Msa0942390:intron | 30.0% |
| TTTATTGCAGGTATTACAGT+TGG | - | chr6_3:17057706-17057725 | Msa0942390:intron | 30.0% | |
| !! | TCCTGCTACTTTAAAAATGA+TGG | - | chr6_3:17057907-17057926 | Msa0942390:intron | 30.0% |
| !!! | TCCATCATTTTTAAAGTAGC+AGG | + | chr6_3:17057911-17057930 | None:intergenic | 30.0% |
| ! | GAGAAAACTGTATGGATTTT+GGG | + | chr6_3:17057983-17058002 | None:intergenic | 30.0% |
| AGTAACCTTGTAATATTTCC+AGG | + | chr6_3:17058076-17058095 | None:intergenic | 30.0% | |
| ! | GAGGATTTAAGGAAGTATAA+AGG | - | chr6_3:17058109-17058128 | Msa0942390:CDS | 30.0% |
| AATTACCAATCTCCTGTTAA+TGG | + | chr6_3:17058181-17058200 | None:intergenic | 30.0% | |
| AAAATCAATCATGGAAGGAA+AGG | - | chr6_3:17058322-17058341 | Msa0942390:CDS | 30.0% | |
| ! | GATTTTTATCCTGTGAAAAG+TGG | + | chr6_3:17058411-17058430 | None:intergenic | 30.0% |
| TATTATACAATTTCCCACCT+CGG | + | chr6_3:17058756-17058775 | None:intergenic | 30.0% | |
| AAACCAGTGTTGTCAAATAA+TGG | - | chr6_3:17059089-17059108 | Msa0942390:CDS | 30.0% | |
| TCAAATTCCACCACATTATA+AGG | + | chr6_3:17059132-17059151 | None:intergenic | 30.0% | |
| !! | TTTGATGACTGCATTTTTCA+TGG | - | chr6_3:17059284-17059303 | Msa0942390:intron | 30.0% |
| TTATGCATATAGATGATCTC+CGG | - | chr6_3:17059482-17059501 | Msa0942390:intron | 30.0% | |
| AGATGATAGAGGAAAAACAA+AGG | + | chr6_3:17059865-17059884 | None:intergenic | 30.0% | |
| CATCAAAACAGAGATAATTG+AGG | + | chr6_3:17059948-17059967 | None:intergenic | 30.0% | |
| !!! | ATTATCTCTGTTTTGATGCT+TGG | - | chr6_3:17059950-17059969 | Msa0942390:intron | 30.0% |
| GAAATAGATAGAGAAAACAG+AGG | + | chr6_3:17059989-17060008 | None:intergenic | 30.0% | |
| ! | TTTGGATTGAGGATTTTGAA+AGG | + | chr6_3:17060271-17060290 | None:intergenic | 30.0% |
| CTCTGTATAAAAAATTGTGC+TGG | - | chr6_3:17060348-17060367 | Msa0942390:intron | 30.0% | |
| AAACAAATGAACTGAACTCA+TGG | + | chr6_3:17060403-17060422 | None:intergenic | 30.0% | |
| AGATTACCTGAATGTTTCTT+TGG | - | chr6_3:17060673-17060692 | Msa0942390:intron | 30.0% | |
| GATTACCTGAATGTTTCTTT+GGG | - | chr6_3:17060674-17060693 | Msa0942390:intron | 30.0% | |
| TAATACCCAAAGAAACATTC+AGG | + | chr6_3:17060682-17060701 | None:intergenic | 30.0% | |
| CCATTAATCCGTTCTTAATA+TGG | + | chr6_3:17060741-17060760 | None:intergenic | 30.0% | |
| !! | CCATATTAAGAACGGATTAA+TGG | - | chr6_3:17060738-17060757 | Msa0942390:intron | 30.0% |
| GTTAGATAATGTGCAATCAA+CGG | + | chr6_3:17060823-17060842 | None:intergenic | 30.0% | |
| TTGATTGCACATTATCTAAC+TGG | - | chr6_3:17060823-17060842 | Msa0942390:intron | 30.0% | |
| !!! | CAAGGATAGTTTTGGTAAAA+TGG | + | chr6_3:17060969-17060988 | None:intergenic | 30.0% |
| GATCATCATAACCTAGTATT+AGG | - | chr6_3:17061256-17061275 | Msa0942390:intron | 30.0% | |
| ATCATGAAAGAGAAAAGCAA+AGG | + | chr6_3:17061386-17061405 | None:intergenic | 30.0% | |
| AGTGTAGTGTAACAATTTGT+GGG | + | chr6_3:17061414-17061433 | None:intergenic | 30.0% | |
| TAGTGTAGTGTAACAATTTG+TGG | + | chr6_3:17061415-17061434 | None:intergenic | 30.0% | |
| CATCAAATGAATAACATCAC+TGG | + | chr6_3:17061461-17061480 | None:intergenic | 30.0% | |
| TTGATGTGGTTAACAAATGT+TGG | - | chr6_3:17061629-17061648 | Msa0942390:intron | 30.0% | |
| TGATGTGGTTAACAAATGTT+GGG | - | chr6_3:17061630-17061649 | Msa0942390:intron | 30.0% | |
| AACTCTTGATCAAGCTAATA+AGG | - | chr6_3:17061681-17061700 | Msa0942390:intron | 30.0% | |
| ! | GAATTTCAAGTGCTTCATTT+AGG | + | chr6_3:17061750-17061769 | None:intergenic | 30.0% |
| TACTGAATCAATACTTGCAT+CGG | + | chr6_3:17061869-17061888 | None:intergenic | 30.0% | |
| !! | GTTTTGGGTGGTATTTTTAT+GGG | - | chr6_3:17061987-17062006 | Msa0942390:intron | 30.0% |
| !! | GTATTTTTATGGGCATTTTC+TGG | - | chr6_3:17061997-17062016 | Msa0942390:intron | 30.0% |
| !! | ATTTTCTGGATTCGGTTTTT+TGG | - | chr6_3:17062011-17062030 | Msa0942390:intron | 30.0% |
| !!! | AATTTTAAGACTGCTATGCA+GGG | - | chr6_3:17062230-17062249 | Msa0942390:intron | 30.0% |
| ! | AAATCCAATTTGAGTTTGCA+GGG | + | chr6_3:17062473-17062492 | None:intergenic | 30.0% |
| ! | AAAATCCAATTTGAGTTTGC+AGG | + | chr6_3:17062474-17062493 | None:intergenic | 30.0% |
| AATTTGAACTCCTTCTCTTA+AGG | + | chr6_3:17062562-17062581 | None:intergenic | 30.0% | |
| AGAAGGAGTTCAAATTTCAT+CGG | - | chr6_3:17062566-17062585 | Msa0942390:CDS | 30.0% | |
| TATTACAAAAGGGGCAAAGA+AGG | - | chr6_3:17053536-17053555 | Msa0942390:three_prime_UTR | 35.0% | |
| TACTTTGATTGGCAAACTGT+TGG | - | chr6_3:17053603-17053622 | Msa0942390:three_prime_UTR | 35.0% | |
| TATAGGAAAGCTAAACAACC+TGG | - | chr6_3:17053639-17053658 | Msa0942390:three_prime_UTR | 35.0% | |
| ! | CAACTAAGAAGCCTTGTAAT+AGG | + | chr6_3:17053666-17053685 | None:intergenic | 35.0% |
| ! | TCTTACCAATCACCAGTTTT+GGG | + | chr6_3:17053765-17053784 | None:intergenic | 35.0% |
| ! | ATCTTACCAATCACCAGTTT+TGG | + | chr6_3:17053766-17053785 | None:intergenic | 35.0% |
| ! | TGTGGTTGACTTTAGTAGAT+TGG | - | chr6_3:17054082-17054101 | Msa0942390:CDS | 35.0% |
| ! | TCTTACCAATCACCAGTTTT+GGG | + | chr6_3:17053765-17053784 | None:intergenic | 35.0% |
| ! | ATCTTACCAATCACCAGTTT+TGG | + | chr6_3:17053766-17053785 | None:intergenic | 35.0% |
| !! | GAAATGTAGATTGGTTTGTG+TGG | - | chr6_3:17054499-17054518 | Msa0942390:CDS | 35.0% |
| ! | TGTGGTTGACTTTAGTAGAT+TGG | - | chr6_3:17054082-17054101 | Msa0942390:CDS | 35.0% |
| CTTGTCAATGGTTAAATGTG+AGG | - | chr6_3:17054749-17054768 | Msa0942390:intron | 35.0% | |
| TTAAAGCGACTTTGGTTGAT+TGG | - | chr6_3:17054777-17054796 | Msa0942390:intron | 35.0% | |
| ! | TGTGATTGACTTTGGTAGAT+TGG | - | chr6_3:17054830-17054849 | Msa0942390:intron | 35.0% |
| !! | AGTGGGTTATGTTAGTTTGA+AGG | + | chr6_3:17054982-17055001 | None:intergenic | 35.0% |
| !! | ATCTTTGAAACCAGCATATC+TGG | - | chr6_3:17055249-17055268 | Msa0942390:intron | 35.0% |
| TTGAATGAAACCAGATATGC+TGG | + | chr6_3:17055262-17055281 | None:intergenic | 35.0% | |
| ! | TGAGGTTGACTTTGATAGTT+TGG | - | chr6_3:17055445-17055464 | Msa0942390:intron | 35.0% |
| TGTTGTTCTTAAGCATGCTT+TGG | - | chr6_3:17055568-17055587 | Msa0942390:intron | 35.0% | |
| GTTGTTCTTAAGCATGCTTT+GGG | - | chr6_3:17055569-17055588 | Msa0942390:intron | 35.0% | |
| TTGTTCTTAAGCATGCTTTG+GGG | - | chr6_3:17055570-17055589 | Msa0942390:intron | 35.0% | |
| ! | CGGGTAATAATTTGCGAAAA+TGG | + | chr6_3:17055934-17055953 | None:intergenic | 35.0% |
| !! | TTTCTAAAATTCCAGCATGC+TGG | - | chr6_3:17056051-17056070 | Msa0942390:intron | 35.0% |
| ! | TTAAAGGGACATTTTAAGCG+GGG | + | chr6_3:17056203-17056222 | None:intergenic | 35.0% |
| ! | GTTAAAGGGACATTTTAAGC+GGG | + | chr6_3:17056204-17056223 | None:intergenic | 35.0% |
| ! | ATTTCTCATTTTGCTCTCTC+GGG | + | chr6_3:17056278-17056297 | None:intergenic | 35.0% |
| CAAGTTCCCAAGGTAAAATT+GGG | + | chr6_3:17056433-17056452 | None:intergenic | 35.0% | |
| !! | GGCAGTAAACAAATTTTAGC+AGG | - | chr6_3:17056805-17056824 | Msa0942390:intron | 35.0% |
| TGAAACTGGGTTAAATCTCA+TGG | - | chr6_3:17056886-17056905 | Msa0942390:intron | 35.0% | |
| !!! | ACATGCCAATTTTTTTGTCC+AGG | - | chr6_3:17056976-17056995 | Msa0942390:intron | 35.0% |
| !!! | TCTGTTTTAGAAAGCCACAA+GGG | + | chr6_3:17057116-17057135 | None:intergenic | 35.0% |
| !!! | TTCTGTTTTAGAAAGCCACA+AGG | + | chr6_3:17057117-17057136 | None:intergenic | 35.0% |
| ACATAACTGGTGACATATAC+GGG | - | chr6_3:17057171-17057190 | Msa0942390:intron | 35.0% | |
| ! | GAGATGTATGGATACTCTTT+TGG | - | chr6_3:17057209-17057228 | Msa0942390:CDS | 35.0% |
| AGAGAGAAAACAAAAGGGAA+GGG | + | chr6_3:17057333-17057352 | None:intergenic | 35.0% | |
| AAGAGAGAAAACAAAAGGGA+AGG | + | chr6_3:17057334-17057353 | None:intergenic | 35.0% | |
| TTTCTCTCTTGTTCACAGAT+AGG | - | chr6_3:17057344-17057363 | Msa0942390:intron | 35.0% | |
| TAATAAATAGTCCTCGCCTT+CGG | + | chr6_3:17057745-17057764 | None:intergenic | 35.0% | |
| ! | GTAGCAGGATTCACATATTT+TGG | + | chr6_3:17057896-17057915 | None:intergenic | 35.0% |
| ! | GGAGAAAACTGTATGGATTT+TGG | + | chr6_3:17057984-17058003 | None:intergenic | 35.0% |
| ATTCTGTGGAGAAAACTGTA+TGG | + | chr6_3:17057991-17058010 | None:intergenic | 35.0% | |
| AATGCACACCATACTTTGAT+TGG | - | chr6_3:17058008-17058027 | Msa0942390:CDS | 35.0% | |
| ACAGTTTGCCAATCAAAGTA+TGG | + | chr6_3:17053603-17053622 | None:intergenic | 35.0% | |
| TACTTTGATTGGCAAACTGT+AGG | - | chr6_3:17053603-17053622 | Msa0942390:three_prime_UTR | 35.0% | |
| CATGGATGTTTACTGTGATT+GGG | - | chr6_3:17058275-17058294 | Msa0942390:CDS | 35.0% | |
| GTCACAAAATCAATCATGGA+AGG | - | chr6_3:17058317-17058336 | Msa0942390:CDS | 35.0% | |
| ATTATACAATTTCCCACCTC+GGG | + | chr6_3:17058755-17058774 | None:intergenic | 35.0% | |
| GGTAAGTTCTTCTGTTTATG+TGG | - | chr6_3:17058785-17058804 | Msa0942390:CDS | 35.0% | |
| !! | TGACTTGGGTTGATGTTTAT+CGG | - | chr6_3:17059048-17059067 | Msa0942390:CDS | 35.0% |
| ! | ATAAGGTTAAGGCACTACTA+AGG | + | chr6_3:17059115-17059134 | None:intergenic | 35.0% |
| AGTGCCTTAACCTTATAATG+TGG | - | chr6_3:17059119-17059138 | Msa0942390:CDS | 35.0% | |
| TCCACCACATTATAAGGTTA+AGG | + | chr6_3:17059126-17059145 | None:intergenic | 35.0% | |
| TTTCATGGTTGCAAACATAC+AGG | - | chr6_3:17059299-17059318 | Msa0942390:intron | 35.0% | |
| ACAGGAGACATATATGAATC+AGG | - | chr6_3:17059577-17059596 | Msa0942390:intron | 35.0% | |
| CAGGAGACATATATGAATCA+GGG | - | chr6_3:17059578-17059597 | Msa0942390:intron | 35.0% | |
| GAGATGTATGGTTACTCATT+TGG | - | chr6_3:17059610-17059629 | Msa0942390:intron | 35.0% | |
| GACAAATGGCAAAAAAACAG+AGG | + | chr6_3:17059791-17059810 | None:intergenic | 35.0% | |
| AGCAAAAAACAGAGGACAAA+TGG | + | chr6_3:17059805-17059824 | None:intergenic | 35.0% | |
| GGAAAAACAGCAAAAAACAG+AGG | + | chr6_3:17059813-17059832 | None:intergenic | 35.0% | |
| GCAATAAACAGAGATGATAG+AGG | + | chr6_3:17059876-17059895 | None:intergenic | 35.0% | |
| AGGGAAAAACAGAGGAAAAA+TGG | + | chr6_3:17059898-17059917 | None:intergenic | 35.0% | |
| AACAAAACAGGGAAAAACAG+AGG | + | chr6_3:17059906-17059925 | None:intergenic | 35.0% | |
| !! | TTTTTCCCTGTTTTGTTGCT+TGG | - | chr6_3:17059909-17059928 | Msa0942390:intron | 35.0% |
| TTTCTAAATCTCAAGGAGCA+AGG | + | chr6_3:17060195-17060214 | None:intergenic | 35.0% | |
| !! | TTGAGGATTTTGAAAGGAGA+GGG | + | chr6_3:17060265-17060284 | None:intergenic | 35.0% |
| !! | ATTGAGGATTTTGAAAGGAG+AGG | + | chr6_3:17060266-17060285 | None:intergenic | 35.0% |
| ATTAGGGTATGTTTGGATTG+AGG | + | chr6_3:17060282-17060301 | None:intergenic | 35.0% | |
| GAAACATTCAGGTAATCTCA+TGG | + | chr6_3:17060671-17060690 | None:intergenic | 35.0% | |
| CATGAAAGACAACTCAGAAT+CGG | + | chr6_3:17060767-17060786 | None:intergenic | 35.0% | |
| GGTTAAATCATTGCACTTAG+AGG | - | chr6_3:17060792-17060811 | Msa0942390:intron | 35.0% | |
| !! | GCACATTATCTAACTGGTTT+TGG | - | chr6_3:17060829-17060848 | Msa0942390:intron | 35.0% |
| ATACTGGCATTGCAATATGA+AGG | + | chr6_3:17060907-17060926 | None:intergenic | 35.0% | |
| !!! | GATAGTTTTGGTAAAATGGC+TGG | + | chr6_3:17060965-17060984 | None:intergenic | 35.0% |
| TTACCAAAACTATCCTTGCT+TGG | - | chr6_3:17060971-17060990 | Msa0942390:intron | 35.0% | |
| TACTTACTTGAGAGGCTAAT+GGG | - | chr6_3:17061121-17061140 | Msa0942390:intron | 35.0% | |
| !!! | TAATGGGGTGTTTGTTTTAG+AGG | - | chr6_3:17061137-17061156 | Msa0942390:intron | 35.0% |
| ATAGTACTTCTGCACAGTTA+AGG | - | chr6_3:17061314-17061333 | Msa0942390:intron | 35.0% | |
| TAGTACTTCTGCACAGTTAA+GGG | - | chr6_3:17061315-17061334 | Msa0942390:intron | 35.0% | |
| CAATGAGATACTGATATACC+CGG | - | chr6_3:17061507-17061526 | Msa0942390:intron | 35.0% | |
| AATGAGATACTGATATACCC+GGG | - | chr6_3:17061508-17061527 | Msa0942390:intron | 35.0% | |
| ! | TATGGATTGAGATTCAGTGT+TGG | - | chr6_3:17061571-17061590 | Msa0942390:intron | 35.0% |
| ! | ATGGATTGAGATTCAGTGTT+GGG | - | chr6_3:17061572-17061591 | Msa0942390:intron | 35.0% |
| ! | TTAGCTTGATCAAGAGTTGA+GGG | + | chr6_3:17061679-17061698 | None:intergenic | 35.0% |
| ! | ATTAGCTTGATCAAGAGTTG+AGG | + | chr6_3:17061680-17061699 | None:intergenic | 35.0% |
| ATCAATATGGAATCAGCACT+AGG | + | chr6_3:17061790-17061809 | None:intergenic | 35.0% | |
| GATGAGAAAACAGAAGAAAG+TGG | - | chr6_3:17061820-17061839 | Msa0942390:intron | 35.0% | |
| AGAAGAAAGTGGAACTTCAA+GGG | - | chr6_3:17061831-17061850 | Msa0942390:intron | 35.0% | |
| ATCTCATCTTTCTGAACACT+TGG | + | chr6_3:17061952-17061971 | None:intergenic | 35.0% | |
| ATGAGATACCAAGTTCTTTC+AGG | - | chr6_3:17061965-17061984 | Msa0942390:intron | 35.0% | |
| !!! | TACCAAGTTCTTTCAGGTTT+TGG | - | chr6_3:17061971-17061990 | Msa0942390:intron | 35.0% |
| !!! | ACCAAGTTCTTTCAGGTTTT+GGG | - | chr6_3:17061972-17061991 | Msa0942390:intron | 35.0% |
| !!! | GGTTTTGGGTGGTATTTTTA+TGG | - | chr6_3:17061986-17062005 | Msa0942390:intron | 35.0% |
| ! | TTATGGGCATTTTCTGGATT+CGG | - | chr6_3:17062003-17062022 | Msa0942390:intron | 35.0% |
| GGATGAAACATCATAGTAGA+AGG | - | chr6_3:17062079-17062098 | Msa0942390:intron | 35.0% | |
| !!! | GAATTTTAAGACTGCTATGC+AGG | - | chr6_3:17062229-17062248 | Msa0942390:intron | 35.0% |
| ! | AATCCAATTTGAGTTTGCAG+GGG | + | chr6_3:17062472-17062491 | None:intergenic | 35.0% |
| !! | TTTGACTTGACCTTAAGAGA+AGG | - | chr6_3:17062549-17062568 | Msa0942390:CDS | 35.0% |
| AACAACCTGGTCCTATTACA+AGG | - | chr6_3:17053652-17053671 | Msa0942390:three_prime_UTR | 40.0% | |
| TTGGGATGTCTACTCATAGA+AGG | + | chr6_3:17053747-17053766 | None:intergenic | 40.0% | |
| ATGAGTAGACATCCCAAAAC+TGG | - | chr6_3:17053750-17053769 | Msa0942390:three_prime_UTR | 40.0% | |
| ! | TGTGGTTGACTTTGGTAGAT+TGG | - | chr6_3:17054141-17054160 | Msa0942390:CDS | 40.0% |
| !! | CTTTAGTAGATTGGTTTCGG+TGG | - | chr6_3:17054552-17054571 | Msa0942390:CDS | 40.0% |
| CGTGGTTTACTTAGGTAGAT+TGG | - | chr6_3:17054602-17054621 | Msa0942390:CDS | 40.0% | |
| !! | CTTAGGTAGATTGGTTTGTG+TGG | - | chr6_3:17054611-17054630 | Msa0942390:CDS | 40.0% |
| GTATAGACACTTCGGATTGA+AGG | - | chr6_3:17054658-17054677 | Msa0942390:CDS | 40.0% | |
| !! | AGGTGTTGTTAAAGCGACTT+TGG | - | chr6_3:17054769-17054788 | Msa0942390:intron | 40.0% |
| !! | CTTTGGTTGATTGGTTTGTG+TGG | - | chr6_3:17054786-17054805 | Msa0942390:intron | 40.0% |
| AAGTACTAACCAGGAGATCA+GGG | - | chr6_3:17054949-17054968 | Msa0942390:intron | 40.0% | |
| AAGCAGAACAACACATCAAG+CGG | + | chr6_3:17055044-17055063 | None:intergenic | 40.0% | |
| ! | CTTGATGTGTTGTTCTGCTT+AGG | - | chr6_3:17055044-17055063 | Msa0942390:intron | 40.0% |
| TTCTGCTTAGGCATGCTTTA+GGG | - | chr6_3:17055056-17055075 | Msa0942390:intron | 40.0% | |
| ! | ATGAAGCACTAACACAGACA+CGG | + | chr6_3:17055325-17055344 | None:intergenic | 40.0% |
| CACTACTACAGCAAACTACA+AGG | + | chr6_3:17055637-17055656 | None:intergenic | 40.0% | |
| !! | GTAAGTGTCGGTGTTGTATT+TGG | - | chr6_3:17055963-17055982 | Msa0942390:intron | 40.0% |
| GTCGAGAAGAAAAAGAGATG+AGG | + | chr6_3:17056017-17056036 | None:intergenic | 40.0% | |
| ! | GACATTTTAAGCGGGGATAT+GGG | + | chr6_3:17056196-17056215 | None:intergenic | 40.0% |
| !! | ACACTGGCTTAAACATAGCA+AGG | - | chr6_3:17056352-17056371 | Msa0942390:intron | 40.0% |
| CCAAGTTCCCAAGGTAAAAT+TGG | + | chr6_3:17056434-17056453 | None:intergenic | 40.0% | |
| ! | CCAATTTTACCTTGGGAACT+TGG | - | chr6_3:17056431-17056450 | Msa0942390:intron | 40.0% |
| TACCCATAATATGCTGCAAC+AGG | + | chr6_3:17056473-17056492 | None:intergenic | 40.0% | |
| ATGCTATCCTAGAGAGCTTA+TGG | - | chr6_3:17056687-17056706 | Msa0942390:CDS | 40.0% | |
| CTTACTTCCATAAGCTCTCT+AGG | + | chr6_3:17056697-17056716 | None:intergenic | 40.0% | |
| CCATAAGCATCCTTCCAAAT+CGG | + | chr6_3:17056767-17056786 | None:intergenic | 40.0% | |
| TGGACTTGTACAACTTACAC+TGG | - | chr6_3:17056784-17056803 | Msa0942390:intron | 40.0% | |
| TTAGCAGGAAATCAGAGAAC+AGG | - | chr6_3:17056820-17056839 | Msa0942390:intron | 40.0% | |
| TAGCAGGAAATCAGAGAACA+GGG | - | chr6_3:17056821-17056840 | Msa0942390:intron | 40.0% | |
| !! | GTCACAACCTTTTAAGTACC+TGG | + | chr6_3:17056997-17057016 | None:intergenic | 40.0% |
| TCGAAGGTCACTGATATGAA+AGG | + | chr6_3:17057084-17057103 | None:intergenic | 40.0% | |
| !!! | TGTTTTAGAAAGCCACAAGG+GGG | + | chr6_3:17057114-17057133 | None:intergenic | 40.0% |
| !!! | CTGTTTTAGAAAGCCACAAG+GGG | + | chr6_3:17057115-17057134 | None:intergenic | 40.0% |
| ! | AGAAGAAGTACGGGAAGATA+AGG | - | chr6_3:17057133-17057152 | Msa0942390:intron | 40.0% |
| CTTGTTCACAGATAGGACTT+CGG | - | chr6_3:17057351-17057370 | Msa0942390:intron | 40.0% | |
| TACCATTTAGTGTAGGGAAC+TGG | - | chr6_3:17057456-17057475 | Msa0942390:intron | 40.0% | |
| !! | GTACAAACCTCTTTGGGATA+AGG | + | chr6_3:17057551-17057570 | None:intergenic | 40.0% |
| ATGCACAGAAATATGGCATC+AGG | - | chr6_3:17057651-17057670 | Msa0942390:intron | 40.0% | |
| !!! | ATTTTGACCATGCTGGCTTA+GGG | + | chr6_3:17057829-17057848 | None:intergenic | 40.0% |
| !!! | TATTTTGACCATGCTGGCTT+AGG | + | chr6_3:17057830-17057849 | None:intergenic | 40.0% |
| !!! | CTCAAGTATTTTGACCATGC+TGG | + | chr6_3:17057836-17057855 | None:intergenic | 40.0% |
| TTTCCATCATCACGATCAAC+GGG | + | chr6_3:17057953-17057972 | None:intergenic | 40.0% | |
| CTTTCCATCATCACGATCAA+CGG | + | chr6_3:17057954-17057973 | None:intergenic | 40.0% | |
| !!! | ACTGTATGGATTTTGGGATG+TGG | + | chr6_3:17057977-17057996 | None:intergenic | 40.0% |
| AAAGTATGGTGTGCATTCTG+TGG | + | chr6_3:17058005-17058024 | None:intergenic | 40.0% | |
| ! | ATGCACAGTTTTCGTTTGAG+TGG | - | chr6_3:17058046-17058065 | Msa0942390:CDS | 40.0% |
| GACAGCCTGGAAATATTACA+AGG | - | chr6_3:17058068-17058087 | Msa0942390:CDS | 40.0% | |
| GAAGTATAAAGGCCAAGATC+TGG | - | chr6_3:17058120-17058139 | Msa0942390:CDS | 40.0% | |
| ATCGAGGGAACATAATGTGT+AGG | + | chr6_3:17058148-17058167 | None:intergenic | 40.0% | |
| ATGAGTCGACATCCATTAAC+AGG | - | chr6_3:17058166-17058185 | Msa0942390:intron | 40.0% | |
| GACATCCATTAACAGGAGAT+TGG | - | chr6_3:17058173-17058192 | Msa0942390:intron | 40.0% | |
| GCATGGATGTTTACTGTGAT+TGG | - | chr6_3:17058274-17058293 | Msa0942390:CDS | 40.0% | |
| ATTGGGACAAAGTTGTCGAT+TGG | - | chr6_3:17058292-17058311 | Msa0942390:CDS | 40.0% | |
| GGCAGTCACAAAATCAATCA+TGG | - | chr6_3:17058313-17058332 | Msa0942390:CDS | 40.0% | |
| ATCATGGAAGGAAAGGACTA+AGG | - | chr6_3:17058329-17058348 | Msa0942390:CDS | 40.0% | |
| TCATGGAAGGAAAGGACTAA+GGG | - | chr6_3:17058330-17058349 | Msa0942390:CDS | 40.0% | |
| !! | CGTTTGTTACCACTTTTCAC+AGG | - | chr6_3:17058399-17058418 | Msa0942390:CDS | 40.0% |
| GCACAAACTAACATGGGAAA+TGG | + | chr6_3:17058730-17058749 | None:intergenic | 40.0% | |
| ! | GCAGCTGGTTTATTAATTGC+TGG | + | chr6_3:17058880-17058899 | None:intergenic | 40.0% |
| GATGCTGATATGATCATGAG+AGG | - | chr6_3:17058955-17058974 | Msa0942390:CDS | 40.0% | |
| TACTCGTAAGGAGTTGAAAC+AGG | + | chr6_3:17059021-17059040 | None:intergenic | 40.0% | |
| AAACATCAACCCAAGTCAGT+AGG | + | chr6_3:17059046-17059065 | None:intergenic | 40.0% | |
| !! | GACTTGGGTTGATGTTTATC+GGG | - | chr6_3:17059049-17059068 | Msa0942390:CDS | 40.0% |
| AGGCCATTATTTGACAACAC+TGG | + | chr6_3:17059095-17059114 | None:intergenic | 40.0% | |
| GCCTTAACCTTATAATGTGG+TGG | - | chr6_3:17059122-17059141 | Msa0942390:CDS | 40.0% | |
| GTTCGTTGTCACAACCAATA+AGG | + | chr6_3:17059405-17059424 | None:intergenic | 40.0% | |
| !! | TCCGGAAATTTGCTATGCTA+TGG | - | chr6_3:17059500-17059519 | Msa0942390:intron | 40.0% |
| GCCATAGCATAGCAAATTTC+CGG | + | chr6_3:17059504-17059523 | None:intergenic | 40.0% | |
| GAGACATATATGAATCAGGG+TGG | - | chr6_3:17059581-17059600 | Msa0942390:intron | 40.0% | |
| CATACTTGACCAATGTAGTC+AGG | - | chr6_3:17059673-17059692 | Msa0942390:intron | 40.0% | |
| AGGAACCAAGCAACAAAACA+GGG | + | chr6_3:17059917-17059936 | None:intergenic | 40.0% | |
| AAGGAACCAAGCAACAAAAC+AGG | + | chr6_3:17059918-17059937 | None:intergenic | 40.0% | |
| AGAAAACAGAGGGAAAACAG+AGG | + | chr6_3:17059978-17059997 | None:intergenic | 40.0% | |
| AGTTCTTACGTAGGTTCGAT+CGG | + | chr6_3:17060088-17060107 | None:intergenic | 40.0% | |
| AGCAAGGTCTCAAACTGAAA+AGG | + | chr6_3:17060179-17060198 | None:intergenic | 40.0% | |
| !! | TGAGGATTTTGAAAGGAGAG+GGG | + | chr6_3:17060264-17060283 | None:intergenic | 40.0% |
| TTATACAGAGAGCTTCTAGC+TGG | + | chr6_3:17060338-17060357 | None:intergenic | 40.0% | |
| ! | TCGCATGAGAGATTTTCACA+GGG | - | chr6_3:17060527-17060546 | Msa0942390:intron | 40.0% |
| !! | GATGAAGATAATGGACACCT+GGG | + | chr6_3:17060576-17060595 | None:intergenic | 40.0% |
| AGGTGTCCATTATCTTCATC+CGG | - | chr6_3:17060576-17060595 | Msa0942390:intron | 40.0% | |
| CACAAACCGGATGAAGATAA+TGG | + | chr6_3:17060585-17060604 | None:intergenic | 40.0% | |
| TCGGTTAAAGCTTCACAAAC+CGG | + | chr6_3:17060598-17060617 | None:intergenic | 40.0% | |
| GTAGCAGACAGAGATAATGT+CGG | + | chr6_3:17060617-17060636 | None:intergenic | 40.0% | |
| CTTTGGGTATTATTGTGCAG+TGG | - | chr6_3:17060690-17060709 | Msa0942390:intron | 40.0% | |
| TGAGTTGTCTTTCATGCATC+AGG | - | chr6_3:17060771-17060790 | Msa0942390:intron | 40.0% | |
| AGATAATGTGCAATCAACGG+TGG | + | chr6_3:17060820-17060839 | None:intergenic | 40.0% | |
| AACATGATATCGCGACTAGA+AGG | + | chr6_3:17060868-17060887 | None:intergenic | 40.0% | |
| GCGATATCATGTTATGTACG+CGG | - | chr6_3:17060875-17060894 | Msa0942390:intron | 40.0% | |
| TATCATGTTATGTACGCGGA+AGG | - | chr6_3:17060879-17060898 | Msa0942390:intron | 40.0% | |
| CTACTTACTTGAGAGGCTAA+TGG | - | chr6_3:17061120-17061139 | Msa0942390:intron | 40.0% | |
| ACTTACTTGAGAGGCTAATG+GGG | - | chr6_3:17061122-17061141 | Msa0942390:intron | 40.0% | |
| CTATATTTGACGTTCGGTTC+AGG | + | chr6_3:17061541-17061560 | None:intergenic | 40.0% | |
| ! | TGAGATTCAGTGTTGGGAAT+TGG | - | chr6_3:17061578-17061597 | Msa0942390:intron | 40.0% |
| GACATGCTTAGCATAGAATG+TGG | - | chr6_3:17061718-17061737 | Msa0942390:intron | 40.0% | |
| CAGAAGAAAGTGGAACTTCA+AGG | - | chr6_3:17061830-17061849 | Msa0942390:intron | 40.0% | |
| AGTGGAACTTCAAGGGAAAT+CGG | - | chr6_3:17061838-17061857 | Msa0942390:intron | 40.0% | |
| GACAAACCATTCAGAGGAAT+TGG | - | chr6_3:17061903-17061922 | Msa0942390:intron | 40.0% | |
| ACCCAAAACCTGAAAGAACT+TGG | + | chr6_3:17061976-17061995 | None:intergenic | 40.0% | |
| !!! | AAGTTCTTTCAGGTTTTGGG+TGG | - | chr6_3:17061975-17061994 | Msa0942390:intron | 40.0% |
| !!! | CGTCATTTTTGTCGTGTGTT+CGG | - | chr6_3:17062035-17062054 | Msa0942390:intron | 40.0% |
| !!! | GTCATTTTTGTCGTGTGTTC+GGG | - | chr6_3:17062036-17062055 | Msa0942390:intron | 40.0% |
| AAGCATGCAATCAGGATTCA+TGG | - | chr6_3:17062107-17062126 | Msa0942390:intron | 40.0% | |
| TCAGGATTCATGGAAAGCAA+TGG | - | chr6_3:17062117-17062136 | Msa0942390:intron | 40.0% | |
| !! | AAGGGGCAAAGAAGGTATCA+TGG | - | chr6_3:17053544-17053563 | Msa0942390:three_prime_UTR | 45.0% |
| ! | AGAAGCCTTGTAATAGGACC+AGG | + | chr6_3:17053660-17053679 | None:intergenic | 45.0% |
| GACATCCCAAAACTGGTGAT+TGG | - | chr6_3:17053757-17053776 | Msa0942390:three_prime_UTR | 45.0% | |
| TTGGGATGTCTACTCACAGA+AGG | + | chr6_3:17054206-17054225 | None:intergenic | 45.0% | |
| GTGAGTAGACATCCCAAAAC+TGG | - | chr6_3:17054209-17054228 | Msa0942390:CDS | 45.0% | |
| GACATCCCAAAACTGGTGAT+TGG | - | chr6_3:17053757-17053776 | Msa0942390:three_prime_UTR | 45.0% | |
| GGTGTCCATGTACTTGTCAA+TGG | - | chr6_3:17054737-17054756 | Msa0942390:intron | 45.0% | |
| GACTTTATATTGTCCCGAGC+TGG | - | chr6_3:17054894-17054913 | Msa0942390:intron | 45.0% | |
| ! | ACACGAACGAAGTACTAACC+AGG | - | chr6_3:17054940-17054959 | Msa0942390:intron | 45.0% |
| ! | GAAGTACTAACCAGGAGATC+AGG | - | chr6_3:17054948-17054967 | Msa0942390:intron | 45.0% |
| GTTCTGCTTAGGCATGCTTT+AGG | - | chr6_3:17055055-17055074 | Msa0942390:intron | 45.0% | |
| CGACACTTACATGTAGACAC+GGG | + | chr6_3:17055953-17055972 | None:intergenic | 45.0% | |
| CCGACACTTACATGTAGACA+CGG | + | chr6_3:17055954-17055973 | None:intergenic | 45.0% | |
| CCGTGTCTACATGTAAGTGT+CGG | - | chr6_3:17055951-17055970 | Msa0942390:intron | 45.0% | |
| ! | GGACATTTTAAGCGGGGATA+TGG | + | chr6_3:17056197-17056216 | None:intergenic | 45.0% |
| ! | CGGCAGGTTTGTTTATTGCA+GGG | + | chr6_3:17056325-17056344 | None:intergenic | 45.0% |
| CCTGCAATAAACAAACCTGC+CGG | - | chr6_3:17056323-17056342 | Msa0942390:intron | 45.0% | |
| CTGCAATAAACAAACCTGCC+GGG | - | chr6_3:17056324-17056343 | Msa0942390:intron | 45.0% | |
| TGCAATAAACAAACCTGCCG+GGG | - | chr6_3:17056325-17056344 | Msa0942390:intron | 45.0% | |
| TTTAAGCCAGTGTACTACCC+CGG | + | chr6_3:17056345-17056364 | None:intergenic | 45.0% | |
| !! | AACTTGGTGCAGAGAAAGGA+AGG | - | chr6_3:17056447-17056466 | Msa0942390:intron | 45.0% |
| AGGCCTGTTGCAGCATATTA+TGG | - | chr6_3:17056467-17056486 | Msa0942390:intron | 45.0% | |
| GGCCTGTTGCAGCATATTAT+GGG | - | chr6_3:17056468-17056487 | Msa0942390:intron | 45.0% | |
| TTCCATAAGCTCCTCCGATT+TGG | - | chr6_3:17056750-17056769 | Msa0942390:intron | 45.0% | |
| TTCCAAATCGGAGGAGCTTA+TGG | + | chr6_3:17056755-17056774 | None:intergenic | 45.0% | |
| !! | ATAAGCTCCTCCGATTTGGA+AGG | - | chr6_3:17056754-17056773 | Msa0942390:intron | 45.0% |
| TAAGCATCCTTCCAAATCGG+AGG | + | chr6_3:17056764-17056783 | None:intergenic | 45.0% | |
| !! | CCGATTTGGAAGGATGCTTA+TGG | - | chr6_3:17056764-17056783 | Msa0942390:intron | 45.0% |
| TACGGGAAGATAAGGAACAC+TGG | - | chr6_3:17057141-17057160 | Msa0942390:intron | 45.0% | |
| ACGGGAAGATAAGGAACACT+GGG | - | chr6_3:17057142-17057161 | Msa0942390:intron | 45.0% | |
| ACTGGTGACATATACGGGAA+AGG | - | chr6_3:17057176-17057195 | Msa0942390:intron | 45.0% | |
| GTGACATATACGGGAAAGGA+TGG | - | chr6_3:17057180-17057199 | Msa0942390:CDS | 45.0% | |
| GGATGGATCAGTGAGATGTA+TGG | - | chr6_3:17057197-17057216 | Msa0942390:CDS | 45.0% | |
| GATAACTTGATGCTCTACCC+AGG | - | chr6_3:17057386-17057405 | Msa0942390:intron | 45.0% | |
| ! | GAACCGGTTCTTCTTCACTA+CGG | - | chr6_3:17057431-17057450 | Msa0942390:intron | 45.0% |
| ! | AACCGGTTCTTCTTCACTAC+GGG | - | chr6_3:17057432-17057451 | Msa0942390:intron | 45.0% |
| ! | TACGGGCTACCATTTAGTGT+AGG | - | chr6_3:17057449-17057468 | Msa0942390:intron | 45.0% |
| ! | ACGGGCTACCATTTAGTGTA+GGG | - | chr6_3:17057450-17057469 | Msa0942390:intron | 45.0% |
| GACCAGTTCCCTACACTAAA+TGG | + | chr6_3:17057461-17057480 | None:intergenic | 45.0% | |
| AAACTCGCTCACCATGATGA+TGG | - | chr6_3:17057488-17057507 | Msa0942390:intron | 45.0% | |
| !! | TCTTTGGGATAAGGAGGTTC+TGG | + | chr6_3:17057542-17057561 | None:intergenic | 45.0% |
| AGAACCTCCTTATCCCAAAG+AGG | - | chr6_3:17057541-17057560 | Msa0942390:intron | 45.0% | |
| !! | CAAACCTCTTTGGGATAAGG+AGG | + | chr6_3:17057548-17057567 | None:intergenic | 45.0% |
| CTTGGCGTACAAACCTCTTT+GGG | + | chr6_3:17057557-17057576 | None:intergenic | 45.0% | |
| ACTTGGCGTACAAACCTCTT+TGG | + | chr6_3:17057558-17057577 | None:intergenic | 45.0% | |
| GAAGGTCTTCTACTACAGCA+TGG | - | chr6_3:17057791-17057810 | Msa0942390:intron | 45.0% | |
| GCTGCAATGACGAGGATTTA+AGG | - | chr6_3:17058098-17058117 | Msa0942390:CDS | 45.0% | |
| AATGTGTAGGAGCCAGATCT+TGG | + | chr6_3:17058135-17058154 | None:intergenic | 45.0% | |
| !! | AATGGATGTCGACTCATCGA+GGG | + | chr6_3:17058163-17058182 | None:intergenic | 45.0% |
| !! | TAATGGATGTCGACTCATCG+AGG | + | chr6_3:17058164-17058183 | None:intergenic | 45.0% |
| TGTTGCTCGTCATTTCTGCA+TGG | - | chr6_3:17058257-17058276 | Msa0942390:CDS | 45.0% | |
| ! | CGGGAAGCACAAACTAACAT+GGG | + | chr6_3:17058736-17058755 | None:intergenic | 45.0% |
| ! | TCGGGAAGCACAAACTAACA+TGG | + | chr6_3:17058737-17058756 | None:intergenic | 45.0% |
| !! | ATGTTAGTTTGTGCTTCCCG+AGG | - | chr6_3:17058736-17058755 | Msa0942390:CDS | 45.0% |
| AACCAGCTGCAGTTCTTCAT+TGG | - | chr6_3:17058890-17058909 | Msa0942390:intron | 45.0% | |
| TTGAATTCCCACGGTGTGAT+TGG | + | chr6_3:17058982-17059001 | None:intergenic | 45.0% | |
| !! | CGAGAAGCTTTGAATTCCCA+CGG | + | chr6_3:17058991-17059010 | None:intergenic | 45.0% |
| TGGGAATTCAAAGCTTCTCG+TGG | - | chr6_3:17058991-17059010 | Msa0942390:CDS | 45.0% | |
| AGTCAGTAGGCTTACTCGTA+AGG | + | chr6_3:17059033-17059052 | None:intergenic | 45.0% | |
| ! | TACGAGTAAGCCTACTGACT+TGG | - | chr6_3:17059033-17059052 | Msa0942390:CDS | 45.0% |
| !! | ACGAGTAAGCCTACTGACTT+GGG | - | chr6_3:17059034-17059053 | Msa0942390:CDS | 45.0% |
| TTGCATGCCAGCTACCTTAT+TGG | - | chr6_3:17059388-17059407 | Msa0942390:intron | 45.0% | |
| GTCACAACCAATAAGGTAGC+TGG | + | chr6_3:17059398-17059417 | None:intergenic | 45.0% | |
| ATTACACACTAGCCATCCAG+AGG | - | chr6_3:17059432-17059451 | Msa0942390:intron | 45.0% | |
| GCTATGGCTGCATAAAACAG+AGG | - | chr6_3:17059516-17059535 | Msa0942390:intron | 45.0% | |
| ATGGCTGCATAAAACAGAGG+AGG | - | chr6_3:17059519-17059538 | Msa0942390:intron | 45.0% | |
| GTATGGTTACTCATTTGGCG+CGG | - | chr6_3:17059615-17059634 | Msa0942390:intron | 45.0% | |
| ACACGGTTCGTAAGTAGGAT+CGG | + | chr6_3:17060034-17060053 | None:intergenic | 45.0% | |
| ACGTAACACGGTTCGTAAGT+AGG | + | chr6_3:17060039-17060058 | None:intergenic | 45.0% | |
| TAAAGTCGGGGAACGTAACA+CGG | + | chr6_3:17060051-17060070 | None:intergenic | 45.0% | |
| TCAGGAACGAGTTCTTACGT+AGG | + | chr6_3:17060097-17060116 | None:intergenic | 45.0% | |
| GTGTGTCAAGCAATGTAGTC+AGG | + | chr6_3:17060115-17060134 | None:intergenic | 45.0% | |
| !! | AGGATTTTGAAAGGAGAGGG+GGG | + | chr6_3:17060262-17060281 | None:intergenic | 45.0% |
| !! | GAGGATTTTGAAAGGAGAGG+GGG | + | chr6_3:17060263-17060282 | None:intergenic | 45.0% |
| ! | GTCGCATGAGAGATTTTCAC+AGG | - | chr6_3:17060526-17060545 | Msa0942390:intron | 45.0% |
| ! | CGCATGAGAGATTTTCACAG+GGG | - | chr6_3:17060528-17060547 | Msa0942390:intron | 45.0% |
| !! | GGATGAAGATAATGGACACC+TGG | + | chr6_3:17060577-17060596 | None:intergenic | 45.0% |
| !! | ATTGTGCAGTGGCTTGTTAC+TGG | - | chr6_3:17060701-17060720 | Msa0942390:intron | 45.0% |
| GATATCGCGACTAGAAGGAA+AGG | + | chr6_3:17060863-17060882 | None:intergenic | 45.0% | |
| ! | CTGCCAAGCAAGGATAGTTT+TGG | + | chr6_3:17060977-17060996 | None:intergenic | 45.0% |
| TCCTTGCTTGGCAGTTTATG+AGG | - | chr6_3:17060983-17061002 | Msa0942390:intron | 45.0% | |
| ACCTCATAAACTGCCAAGCA+AGG | + | chr6_3:17060987-17061006 | None:intergenic | 45.0% | |
| TGGCAAAGACCTGTTATAGC+TGG | - | chr6_3:17061031-17061050 | Msa0942390:intron | 45.0% | |
| CAAAGACCTGTTATAGCTGG+TGG | - | chr6_3:17061034-17061053 | Msa0942390:intron | 45.0% | |
| CGTAAACCACCAGCTATAAC+AGG | + | chr6_3:17061043-17061062 | None:intergenic | 45.0% | |
| ! | GTCGCATGAGAGATTTTCAC+AGG | + | chr6_3:17060526-17060545 | None:intergenic | 45.0% |
| TTCGGTTCAGGAACATATCC+CGG | + | chr6_3:17061529-17061548 | None:intergenic | 45.0% | |
| TGATCAAGAGTTGAGGGATC+CGG | + | chr6_3:17061673-17061692 | None:intergenic | 45.0% | |
| ! | ATGGTTTGTCACGACACGAT+TGG | + | chr6_3:17061893-17061912 | None:intergenic | 45.0% |
| TGTCGTGACAAACCATTCAG+AGG | - | chr6_3:17061897-17061916 | Msa0942390:intron | 45.0% | |
| CACTTGCCAATTCCTCTGAA+TGG | + | chr6_3:17061912-17061931 | None:intergenic | 45.0% | |
| GGAATTGGCAAGTGTTCAGA+AGG | - | chr6_3:17061918-17061937 | Msa0942390:intron | 45.0% | |
| ATTGGCAAGTGTTCAGAAGG+AGG | - | chr6_3:17061921-17061940 | Msa0942390:intron | 45.0% | |
| GTCATAGAAGACGAGGAACA+AGG | - | chr6_3:17062058-17062077 | Msa0942390:intron | 45.0% | |
| ! | AGGAGAAGAAGCATGCAATC+AGG | - | chr6_3:17062099-17062118 | Msa0942390:intron | 45.0% |
| ! | CGATGCTCCTTTTCATTCTC+CGG | - | chr6_3:17062180-17062199 | Msa0942390:intron | 45.0% |
| ! | GATGCTCCTTTTCATTCTCC+GGG | - | chr6_3:17062181-17062200 | Msa0942390:intron | 45.0% |
| AAACCTCAGAACTCTCAGAC+TGG | + | chr6_3:17062330-17062349 | None:intergenic | 45.0% | |
| !! | AGTCTGAGAGTTCTGAGGTT+TGG | - | chr6_3:17062329-17062348 | Msa0942390:intron | 45.0% |
| ! | CAATTTGAGTTTGCAGGGGT+AGG | + | chr6_3:17062468-17062487 | None:intergenic | 45.0% |
| CTACCCCTGCAAACTCAAAT+TGG | - | chr6_3:17062466-17062485 | Msa0942390:CDS | 45.0% | |
| AGGTGTCAGTGTGTTGTGTC+TGG | - | chr6_3:17053886-17053905 | Msa0942390:three_prime_UTR | 50.0% | |
| GTGTCAGTGTTGTGTGTGTC+TGG | - | chr6_3:17054362-17054381 | Msa0942390:CDS | 50.0% | |
| GGATTTGAACCCTGATCTCC+TGG | + | chr6_3:17054961-17054980 | None:intergenic | 50.0% | |
| AGATACAGCAACCAGCATGC+TGG | + | chr6_3:17056065-17056084 | None:intergenic | 50.0% | |
| ! | ATTGCAGGGTACCTGCATAG+AGG | + | chr6_3:17056311-17056330 | None:intergenic | 50.0% |
| ! | CCGGCAGGTTTGTTTATTGC+AGG | + | chr6_3:17056326-17056345 | None:intergenic | 50.0% |
| GACGCAGACATGATTATCCG+TGG | - | chr6_3:17056407-17056426 | Msa0942390:intron | 50.0% | |
| ! | TCCGTGGCCCAATTTTACCT+TGG | - | chr6_3:17056423-17056442 | Msa0942390:intron | 50.0% |
| CCCAAGGTAAAATTGGGCCA+CGG | + | chr6_3:17056427-17056446 | None:intergenic | 50.0% | |
| ! | CCGTGGCCCAATTTTACCTT+GGG | - | chr6_3:17056424-17056443 | Msa0942390:intron | 50.0% |
| TTCTCTGCACCAAGTTCCCA+AGG | + | chr6_3:17056443-17056462 | None:intergenic | 50.0% | |
| !! | TGGGAACTTGGTGCAGAGAA+AGG | - | chr6_3:17056443-17056462 | Msa0942390:intron | 50.0% |
| CACTGGGCGACAAACATAAC+TGG | - | chr6_3:17057158-17057177 | Msa0942390:intron | 50.0% | |
| CCTCACGAGGGATATAACCT+GGG | + | chr6_3:17057406-17057425 | None:intergenic | 50.0% | |
| CCAGGTTATATCCCTCGTGA+GGG | - | chr6_3:17057404-17057423 | Msa0942390:intron | 50.0% | |
| AGCCCGTAGTGAAGAAGAAC+CGG | + | chr6_3:17057437-17057456 | None:intergenic | 50.0% | |
| !! | AAGGAGGTTCTGGAAAGAGC+CGG | + | chr6_3:17057532-17057551 | None:intergenic | 50.0% |
| TGGAACTTGACGCTAACCGA+AGG | - | chr6_3:17057726-17057745 | Msa0942390:intron | 50.0% | |
| CTACTACAGCATGGAGCGAA+TGG | - | chr6_3:17057800-17057819 | Msa0942390:intron | 50.0% | |
| ACACCCGTTGATCGTGATGA+TGG | - | chr6_3:17057947-17057966 | Msa0942390:intron | 50.0% | |
| TTTCGTTTGAGTGGACAGCC+TGG | - | chr6_3:17058055-17058074 | Msa0942390:CDS | 50.0% | |
| GTTACTGAGCTGCAATGACG+AGG | - | chr6_3:17058090-17058109 | Msa0942390:CDS | 50.0% | |
| !! | TTAGTTTGTGCTTCCCGAGG+TGG | - | chr6_3:17058739-17058758 | Msa0942390:CDS | 50.0% |
| ! | TAGTTTGTGCTTCCCGAGGT+GGG | - | chr6_3:17058740-17058759 | Msa0942390:CDS | 50.0% |
| AGCCAATGAAGAACTGCAGC+TGG | + | chr6_3:17058895-17058914 | None:intergenic | 50.0% | |
| GGGTGGATCAGTGAGATGTA+TGG | - | chr6_3:17059598-17059617 | Msa0942390:intron | 50.0% | |
| GGACTCGTTCCTGACTACAT+TGG | + | chr6_3:17059685-17059704 | None:intergenic | 50.0% | |
| ATCGTACGACCCTACATGCT+GGG | + | chr6_3:17059706-17059725 | None:intergenic | 50.0% | |
| ACCAGAGTAGAGTCGAAGCA+CGG | + | chr6_3:17059751-17059770 | None:intergenic | 50.0% | |
| GCTTCGACTCTACTCTGGTT+CGG | - | chr6_3:17059752-17059771 | Msa0942390:intron | 50.0% | |
| GGTTCGTAAGTAGGATCGGT+AGG | + | chr6_3:17060030-17060049 | None:intergenic | 50.0% | |
| TGGTGAAGGGACGTAAAGTC+GGG | + | chr6_3:17060064-17060083 | None:intergenic | 50.0% | |
| CTGGTGAAGGGACGTAAAGT+CGG | + | chr6_3:17060065-17060084 | None:intergenic | 50.0% | |
| TAGAGAGCTTCAAGTAGCGC+TGG | - | chr6_3:17060504-17060523 | Msa0942390:intron | 50.0% | |
| !! | AGATAATGGACACCTGGGCA+GGG | + | chr6_3:17060571-17060590 | None:intergenic | 50.0% |
| !! | AAGATAATGGACACCTGGGC+AGG | + | chr6_3:17060572-17060591 | None:intergenic | 50.0% |
| AGCACAGTAGGACGTTAAGG+TGG | + | chr6_3:17060641-17060660 | None:intergenic | 50.0% | |
| ACCTTAACGTCCTACTGTGC+TGG | - | chr6_3:17060640-17060659 | Msa0942390:intron | 50.0% | |
| CATGGAATAGCCAGCACAGT+AGG | + | chr6_3:17060653-17060672 | None:intergenic | 50.0% | |
| TGCAATGCCAGTATACTGCC+CGG | - | chr6_3:17060913-17060932 | Msa0942390:intron | 50.0% | |
| AAACCAACCGGGCAGTATAC+TGG | + | chr6_3:17060923-17060942 | None:intergenic | 50.0% | |
| ! | AGTATACTGCCCGGTTGGTT+TGG | - | chr6_3:17060922-17060941 | Msa0942390:intron | 50.0% |
| TGAAACACGGCCAAACCAAC+CGG | + | chr6_3:17060935-17060954 | None:intergenic | 50.0% | |
| GGCTGGTATCAGCTGAAACA+CGG | + | chr6_3:17060948-17060967 | None:intergenic | 50.0% | |
| GCTTGGCAGTTTATGAGGTG+AGG | - | chr6_3:17060988-17061007 | Msa0942390:intron | 50.0% | |
| AGGATGTTCGCAAGCCTTGA+GGG | - | chr6_3:17061008-17061027 | Msa0942390:intron | 50.0% | |
| TAGCCTATACAGGCAAGCGA+AGG | + | chr6_3:17061067-17061086 | None:intergenic | 50.0% | |
| TCGCTTGCCTGTATAGGCTA+TGG | - | chr6_3:17061067-17061086 | Msa0942390:intron | 50.0% | |
| ACAGGAGCCATAGCCTATAC+AGG | + | chr6_3:17061077-17061096 | None:intergenic | 50.0% | |
| ACCAGCGCTACTTACTTGAG+AGG | - | chr6_3:17061113-17061132 | Msa0942390:intron | 50.0% | |
| TCCGAGGAGCAATAGCGTTT+GGG | - | chr6_3:17061207-17061226 | Msa0942390:intron | 50.0% | |
| ACCCAAACGCTATTGCTCCT+CGG | + | chr6_3:17061211-17061230 | None:intergenic | 50.0% | |
| TCGGTTCAGGAACATATCCC+GGG | + | chr6_3:17061528-17061547 | None:intergenic | 50.0% | |
| TGTTCGGGTCATAGAAGACG+AGG | - | chr6_3:17062051-17062070 | Msa0942390:intron | 50.0% | |
| ! | TCCTTTTCATTCTCCGGGTC+CGG | - | chr6_3:17062186-17062205 | Msa0942390:intron | 50.0% |
| GATGAACTCACCTTTACGCC+CGG | + | chr6_3:17062208-17062227 | None:intergenic | 50.0% | |
| AAGCCAGTCTGAGAGTTCTG+AGG | - | chr6_3:17062324-17062343 | Msa0942390:intron | 50.0% | |
| ATTGTCCCGAGCTGGCAGTT+TGG | - | chr6_3:17054902-17054921 | Msa0942390:intron | 55.0% | |
| ACCAACCAAACTGCCAGCTC+GGG | + | chr6_3:17054910-17054929 | None:intergenic | 55.0% | |
| CACCAACCAAACTGCCAGCT+CGG | + | chr6_3:17054911-17054930 | None:intergenic | 55.0% | |
| !! | GCAGTTTGGTTGGTGAGCTG+AGG | - | chr6_3:17054916-17054935 | Msa0942390:intron | 55.0% |
| CCAACTTTGTCGCACAGCTC+TGG | + | chr6_3:17057050-17057069 | None:intergenic | 55.0% | |
| CCAGAGCTGTGCGACAAAGT+TGG | - | chr6_3:17057047-17057066 | Msa0942390:intron | 55.0% | |
| GAGCTGTGCGACAAAGTTGG+CGG | - | chr6_3:17057050-17057069 | Msa0942390:intron | 55.0% | |
| AGCTGTGCGACAAAGTTGGC+GGG | - | chr6_3:17057051-17057070 | Msa0942390:intron | 55.0% | |
| !!! | CGACAAAGTTGGCGGGCTTT+TGG | - | chr6_3:17057058-17057077 | Msa0942390:intron | 55.0% |
| CCCAGGTTATATCCCTCGTG+AGG | - | chr6_3:17057403-17057422 | Msa0942390:intron | 55.0% | |
| CCCTCACGAGGGATATAACC+TGG | + | chr6_3:17057407-17057426 | None:intergenic | 55.0% | |
| CCGGTTCAATTCCCTCACGA+GGG | + | chr6_3:17057418-17057437 | None:intergenic | 55.0% | |
| CCCTCGTGAGGGAATTGAAC+CGG | - | chr6_3:17057415-17057434 | Msa0942390:intron | 55.0% | |
| ! | ACCGGTTCAATTCCCTCACG+AGG | + | chr6_3:17057419-17057438 | None:intergenic | 55.0% |
| ATGGTTGCCCTAAGCCAGCA+TGG | - | chr6_3:17057819-17057838 | Msa0942390:intron | 55.0% | |
| TGAGAGGACCAATCACACCG+TGG | - | chr6_3:17058971-17058990 | Msa0942390:CDS | 55.0% | |
| GAGAGGACCAATCACACCGT+GGG | - | chr6_3:17058972-17058991 | Msa0942390:CDS | 55.0% | |
| CTTTGTCGCAAGCCTCTGGA+TGG | + | chr6_3:17059447-17059466 | None:intergenic | 55.0% | |
| CCAACTTTGTCGCAAGCCTC+TGG | + | chr6_3:17059451-17059470 | None:intergenic | 55.0% | |
| CCAGAGGCTTGCGACAAAGT+TGG | - | chr6_3:17059448-17059467 | Msa0942390:intron | 55.0% | |
| GAGGCTTGCGACAAAGTTGG+TGG | - | chr6_3:17059451-17059470 | Msa0942390:intron | 55.0% | |
| TTACTCATTTGGCGCGGCTG+AGG | - | chr6_3:17059621-17059640 | Msa0942390:intron | 55.0% | |
| AGGAACGAGTCCCAGCATGT+AGG | - | chr6_3:17059693-17059712 | Msa0942390:CDS | 55.0% | |
| GGAACGAGTCCCAGCATGTA+GGG | - | chr6_3:17059694-17059713 | Msa0942390:CDS | 55.0% | |
| GATCGTACGACCCTACATGC+TGG | + | chr6_3:17059707-17059726 | None:intergenic | 55.0% | |
| ACCGTGCTTCGACTCTACTC+TGG | - | chr6_3:17059747-17059766 | Msa0942390:intron | 55.0% | |
| GGTGAAGGGACGTAAAGTCG+GGG | + | chr6_3:17060063-17060082 | None:intergenic | 55.0% | |
| AGGTTCGATCGGCTGGTGAA+GGG | + | chr6_3:17060077-17060096 | None:intergenic | 55.0% | |
| TAGGTTCGATCGGCTGGTGA+AGG | + | chr6_3:17060078-17060097 | None:intergenic | 55.0% | |
| CTTACGTAGGTTCGATCGGC+TGG | + | chr6_3:17060084-17060103 | None:intergenic | 55.0% | |
| TTGAAAGGAGAGGGGGGAGA+GGG | + | chr6_3:17060256-17060275 | None:intergenic | 55.0% | |
| TTTGAAAGGAGAGGGGGGAG+AGG | + | chr6_3:17060257-17060276 | None:intergenic | 55.0% | |
| ACCTGGGCAGGGTTGCATTA+AGG | + | chr6_3:17060560-17060579 | None:intergenic | 55.0% | |
| GCCAGCACAGTAGGACGTTA+AGG | + | chr6_3:17060644-17060663 | None:intergenic | 55.0% | |
| !! | GTGCAGTGGCTTGTTACTGG+AGG | - | chr6_3:17060704-17060723 | Msa0942390:intron | 55.0% |
| ATGCCAGTATACTGCCCGGT+TGG | - | chr6_3:17060917-17060936 | Msa0942390:intron | 55.0% | |
| GAAACACGGCCAAACCAACC+GGG | + | chr6_3:17060934-17060953 | None:intergenic | 55.0% | |
| GAGGATGTTCGCAAGCCTTG+AGG | - | chr6_3:17061007-17061026 | Msa0942390:intron | 55.0% | |
| ATGTTCGCAAGCCTTGAGGG+TGG | - | chr6_3:17061011-17061030 | Msa0942390:intron | 55.0% | |
| ACAGGTCTTTGCCACCCTCA+AGG | + | chr6_3:17061025-17061044 | None:intergenic | 55.0% | |
| CGTCCTTCGCTTGCCTGTAT+AGG | - | chr6_3:17061061-17061080 | Msa0942390:intron | 55.0% | |
| GCCTCTCAAGTAAGTAGCGC+TGG | + | chr6_3:17061117-17061136 | None:intergenic | 55.0% | |
| GTGTCCTGAGAAGATCTCCG+AGG | - | chr6_3:17061191-17061210 | Msa0942390:intron | 55.0% | |
| TGCTCCTCGGAGATCTTCTC+AGG | + | chr6_3:17061198-17061217 | None:intergenic | 55.0% | |
| CTCCGAGGAGCAATAGCGTT+TGG | - | chr6_3:17061206-17061225 | Msa0942390:intron | 55.0% | |
| GGAGCTTCGACAAAGCAGAC+TGG | - | chr6_3:17061599-17061618 | Msa0942390:intron | 55.0% | |
| !! | AGACTGGCGAGAGGTTGATG+TGG | - | chr6_3:17061615-17061634 | Msa0942390:intron | 55.0% |
| ATCCGGTGGGTCTGGGAATT+TGG | + | chr6_3:17061656-17061675 | None:intergenic | 55.0% | |
| CAAGAGTTGAGGGATCCGGT+GGG | + | chr6_3:17061669-17061688 | None:intergenic | 55.0% | |
| TCAAGAGTTGAGGGATCCGG+TGG | + | chr6_3:17061670-17061689 | None:intergenic | 55.0% | |
| TGGAAAGCAATGGACGCGAC+CGG | - | chr6_3:17062127-17062146 | Msa0942390:intron | 55.0% | |
| AATCAACATCACGGCCGTGC+CGG | + | chr6_3:17062149-17062168 | None:intergenic | 55.0% | |
| ! | CCTTTTCATTCTCCGGGTCC+GGG | - | chr6_3:17062187-17062206 | Msa0942390:intron | 55.0% |
| TGCTATGCAGGGATCGCACA+AGG | - | chr6_3:17062241-17062260 | Msa0942390:intron | 55.0% | |
| TCCCGAGCTGGCAGTTTGGT+TGG | - | chr6_3:17054906-17054925 | Msa0942390:intron | 60.0% | |
| AACCTGCCGGGGTAGTACAC+TGG | - | chr6_3:17056336-17056355 | Msa0942390:intron | 60.0% | |
| ACAAGGGGGCGAATCGTCGA+AGG | + | chr6_3:17057100-17057119 | None:intergenic | 60.0% | |
| TTCGACGATTCGCCCCCTTG+TGG | - | chr6_3:17057099-17057118 | Msa0942390:intron | 60.0% | |
| CTTGACGCTAACCGAAGGCG+AGG | - | chr6_3:17057731-17057750 | Msa0942390:intron | 60.0% | |
| !! | GAAGCACGGTCGAGGTACTG+TGG | + | chr6_3:17059737-17059756 | None:intergenic | 60.0% |
| GTAGAGTCGAAGCACGGTCG+AGG | + | chr6_3:17059745-17059764 | None:intergenic | 60.0% | |
| GCCTTAATGCAACCCTGCCC+AGG | - | chr6_3:17060556-17060575 | Msa0942390:intron | 60.0% | |
| CGACAAAGCAGACTGGCGAG+AGG | - | chr6_3:17061606-17061625 | Msa0942390:intron | 60.0% | |
| GGCCAAATTCCCAGACCCAC+CGG | - | chr6_3:17061651-17061670 | Msa0942390:intron | 60.0% | |
| TTGAGGGATCCGGTGGGTCT+GGG | + | chr6_3:17061663-17061682 | None:intergenic | 60.0% | |
| CCCGGACCCGGAGAATGAAA+AGG | + | chr6_3:17062190-17062209 | None:intergenic | 60.0% | |
| AGCCAGTGTACTACCCCGGC+AGG | + | chr6_3:17056341-17056360 | None:intergenic | 65.0% | |
| GTTGAGGGATCCGGTGGGTC+TGG | + | chr6_3:17061664-17061683 | None:intergenic | 65.0% | |
| AGCAATGGACGCGACCGGCA+CGG | - | chr6_3:17062132-17062151 | Msa0942390:intron | 65.0% | |
| TTCTCCGGGTCCGGGCGTAA+AGG | - | chr6_3:17062195-17062214 | Msa0942390:intron | 65.0% | |
| CTCACCTTTACGCCCGGACC+CGG | + | chr6_3:17062202-17062221 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_3 | gene | 17053522 | 17062644 | 17053522 | ID=Msa0942390;Name=Msa0942390 |
| chr6_3 | mRNA | 17053522 | 17062644 | 17053522 | ID=Msa0942390-mRNA-1;Parent=Msa0942390;Name=Msa0942390-mRNA-1;_AED=0.31;_eAED=0.31;_QI=0|0.5|0.33|1|0.5|0.22|9|471|712 |
| chr6_3 | exon | 17053522 | 17054682 | 17053522 | ID=Msa0942390-mRNA-1:exon:5210;Parent=Msa0942390-mRNA-1 |
| chr6_3 | exon | 17056626 | 17056767 | 17056626 | ID=Msa0942390-mRNA-1:exon:5209;Parent=Msa0942390-mRNA-1 |
| chr6_3 | exon | 17057177 | 17057293 | 17057177 | ID=Msa0942390-mRNA-1:exon:5208;Parent=Msa0942390-mRNA-1 |
| chr6_3 | exon | 17057972 | 17058158 | 17057972 | ID=Msa0942390-mRNA-1:exon:5207;Parent=Msa0942390-mRNA-1 |
| chr6_3 | exon | 17058207 | 17058450 | 17058207 | ID=Msa0942390-mRNA-1:exon:5206;Parent=Msa0942390-mRNA-1 |
| chr6_3 | exon | 17058604 | 17058804 | 17058604 | ID=Msa0942390-mRNA-1:exon:5205;Parent=Msa0942390-mRNA-1 |
| chr6_3 | exon | 17058925 | 17059168 | 17058925 | ID=Msa0942390-mRNA-1:exon:5204;Parent=Msa0942390-mRNA-1 |
| chr6_3 | exon | 17059677 | 17059758 | 17059677 | ID=Msa0942390-mRNA-1:exon:5203;Parent=Msa0942390-mRNA-1 |
| chr6_3 | exon | 17062413 | 17062644 | 17062413 | ID=Msa0942390-mRNA-1:exon:5202;Parent=Msa0942390-mRNA-1 |
| chr6_3 | CDS | 17062413 | 17062644 | 17062413 | ID=Msa0942390-mRNA-1:cds;Parent=Msa0942390-mRNA-1 |
| chr6_3 | CDS | 17059677 | 17059758 | 17059677 | ID=Msa0942390-mRNA-1:cds;Parent=Msa0942390-mRNA-1 |
| chr6_3 | CDS | 17058925 | 17059168 | 17058925 | ID=Msa0942390-mRNA-1:cds;Parent=Msa0942390-mRNA-1 |
| chr6_3 | CDS | 17058604 | 17058804 | 17058604 | ID=Msa0942390-mRNA-1:cds;Parent=Msa0942390-mRNA-1 |
| chr6_3 | CDS | 17058207 | 17058450 | 17058207 | ID=Msa0942390-mRNA-1:cds;Parent=Msa0942390-mRNA-1 |
| chr6_3 | CDS | 17057972 | 17058158 | 17057972 | ID=Msa0942390-mRNA-1:cds;Parent=Msa0942390-mRNA-1 |
| chr6_3 | CDS | 17057177 | 17057293 | 17057177 | ID=Msa0942390-mRNA-1:cds;Parent=Msa0942390-mRNA-1 |
| chr6_3 | CDS | 17056626 | 17056767 | 17056626 | ID=Msa0942390-mRNA-1:cds;Parent=Msa0942390-mRNA-1 |
| chr6_3 | CDS | 17053993 | 17054682 | 17053993 | ID=Msa0942390-mRNA-1:cds;Parent=Msa0942390-mRNA-1 |
| chr6_3 | three_prime_UTR | 17053522 | 17053992 | 17053522 | ID=Msa0942390-mRNA-1:three_prime_utr;Parent=Msa0942390-mRNA-1 |
| Gene Sequence |
| Protein sequence |
