Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1386430 | XP_003609890.1 | 88.116 | 345 | 22 | 3 | 1 | 330 | 1 | 341 | 2.19e-172 | 492 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1386430 | sp|Q9C5W0|DGAT3_ARATH | 36.813 | 364 | 169 | 14 | 1 | 318 | 1 | 349 | 1.92e-33 | 129 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1386430 | G7JR20 | 88.116 | 345 | 22 | 3 | 1 | 330 | 1 | 341 | 1.05e-172 | 492 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0004790 | Msa1386430 | -0.801185 | 1.014616e-48 | -8.615850e-47 |
Msa0006390 | Msa1386430 | 0.800065 | 1.716456e-48 | -8.615850e-47 |
Msa0011180 | Msa1386430 | 0.810459 | 1.140518e-50 | -8.615850e-47 |
Msa0011720 | Msa1386430 | 0.853128 | 2.932569e-61 | -8.615850e-47 |
Msa0047940 | Msa1386430 | 0.863857 | 1.845373e-64 | -8.615850e-47 |
Msa0048000 | Msa1386430 | 0.805448 | 1.328511e-49 | -8.615850e-47 |
Msa0050430 | Msa1386430 | 0.802968 | 4.360790e-49 | -8.615850e-47 |
Msa0050730 | Msa1386430 | 0.844589 | 6.884328e-59 | -8.615850e-47 |
Msa0050760 | Msa1386430 | 0.848100 | 7.601305e-60 | -8.615850e-47 |
Msa0060600 | Msa1386430 | 0.834517 | 2.863498e-56 | -8.615850e-47 |
Msa0072000 | Msa1386430 | 0.809160 | 2.171087e-50 | -8.615850e-47 |
Msa0079250 | Msa1386430 | 0.808184 | 3.508503e-50 | -8.615850e-47 |
Msa0087110 | Msa1386430 | 0.819079 | 1.401983e-52 | -8.615850e-47 |
Msa0092990 | Msa1386430 | 0.806464 | 8.121490e-50 | -8.615850e-47 |
Msa0094100 | Msa1386430 | 0.834807 | 2.420827e-56 | -8.615850e-47 |
Msa0105340 | Msa1386430 | 0.846349 | 2.297012e-59 | -8.615850e-47 |
Msa0105700 | Msa1386430 | 0.813341 | 2.688085e-51 | -8.615850e-47 |
Msa0111310 | Msa1386430 | 0.802626 | 5.131217e-49 | -8.615850e-47 |
Msa0120340 | Msa1386430 | 0.806673 | 7.337798e-50 | -8.615850e-47 |
Msa1362880 | Msa1386430 | 0.802140 | 6.461086e-49 | -8.615850e-47 |
Msa1365040 | Msa1386430 | -0.814297 | 1.655371e-51 | -8.615850e-47 |
Msa1369530 | Msa1386430 | 0.844529 | 7.144306e-59 | -8.615850e-47 |
Msa1370650 | Msa1386430 | 0.803522 | 3.348665e-49 | -8.615850e-47 |
Msa1386430 | Msa1386520 | 0.813533 | 2.439759e-51 | -8.615850e-47 |
Msa1386430 | Msa1390770 | 0.803960 | 2.716862e-49 | -8.615850e-47 |
Msa1386430 | Msa1393330 | 0.812417 | 4.285102e-51 | -8.615850e-47 |
Msa1386430 | Msa1395530 | 0.801765 | 7.714761e-49 | -8.615850e-47 |
Msa1386430 | Msa1404540 | 0.820764 | 5.772387e-53 | -8.615850e-47 |
Msa1386430 | Msa1404670 | 0.830476 | 2.874808e-55 | -8.615850e-47 |
Msa1386430 | Msa1408790 | 0.863212 | 2.925418e-64 | -8.615850e-47 |
Msa1386430 | Msa1431060 | 0.812338 | 4.457302e-51 | -8.615850e-47 |
Msa1386430 | Msa1432640 | 0.823770 | 1.158122e-53 | -8.615850e-47 |
Msa1386430 | Msa1436040 | 0.861921 | 7.304078e-64 | -8.615850e-47 |
Msa1386430 | Msa1440600 | 0.849166 | 3.850397e-60 | -8.615850e-47 |
Msa1386430 | Msa1444250 | -0.806331 | 8.665257e-50 | -8.615850e-47 |
Msa1386430 | Msa1451620 | -0.818403 | 1.996591e-52 | -8.615850e-47 |
Msa1386430 | Msa1455390 | 0.830963 | 2.183732e-55 | -8.615850e-47 |
Msa1386430 | Msa1456810 | 0.805236 | 1.471296e-49 | -8.615850e-47 |
Msa1386430 | Msa1457670 | -0.803962 | 2.714061e-49 | -8.615850e-47 |
Msa1386430 | Msa1458550 | 0.833702 | 4.582006e-56 | -8.615850e-47 |
Msa1386430 | Msa1461250 | -0.824592 | 7.426586e-54 | -8.615850e-47 |
Msa0610590 | Msa1386430 | 0.824349 | 8.472052e-54 | -8.615850e-47 |
Msa0617830 | Msa1386430 | 0.806728 | 7.144595e-50 | -8.615850e-47 |
Msa0621590 | Msa1386430 | 0.820590 | 6.328354e-53 | -8.615850e-47 |
Msa0624730 | Msa1386430 | 0.817212 | 3.706368e-52 | -8.615850e-47 |
Msa0631990 | Msa1386430 | 0.832495 | 9.151716e-56 | -8.615850e-47 |
Msa0638280 | Msa1386430 | 0.815375 | 9.547502e-52 | -8.615850e-47 |
Msa0638320 | Msa1386430 | 0.807536 | 4.817902e-50 | -8.615850e-47 |
Msa0647450 | Msa1386430 | -0.800994 | 1.109654e-48 | -8.615850e-47 |
Msa0651190 | Msa1386430 | 0.821943 | 3.085624e-53 | -8.615850e-47 |
Msa0651400 | Msa1386430 | 0.801607 | 8.315323e-49 | -8.615850e-47 |
Msa0656680 | Msa1386430 | 0.804817 | 1.800311e-49 | -8.615850e-47 |
Msa0660300 | Msa1386430 | 0.824191 | 9.225455e-54 | -8.615850e-47 |
Msa0662650 | Msa1386430 | 0.812581 | 3.944166e-51 | -8.615850e-47 |
Msa0664950 | Msa1386430 | 0.801303 | 9.595635e-49 | -8.615850e-47 |
Msa0669850 | Msa1386430 | 0.804934 | 1.701649e-49 | -8.615850e-47 |
Msa0670660 | Msa1386430 | 0.842108 | 3.161982e-58 | -8.615850e-47 |
Msa0678820 | Msa1386430 | 0.825437 | 4.690035e-54 | -8.615850e-47 |
Msa0692110 | Msa1386430 | 0.816903 | 4.350749e-52 | -8.615850e-47 |
Msa0694250 | Msa1386430 | 0.801036 | 1.088304e-48 | -8.615850e-47 |
Msa0697140 | Msa1386430 | 0.817720 | 2.849006e-52 | -8.615850e-47 |
Msa0700070 | Msa1386430 | 0.802194 | 6.298902e-49 | -8.615850e-47 |
Msa0708860 | Msa1386430 | 0.809677 | 1.681096e-50 | -8.615850e-47 |
Msa0714340 | Msa1386430 | 0.808229 | 3.432112e-50 | -8.615850e-47 |
Msa0714380 | Msa1386430 | 0.802614 | 5.160120e-49 | -8.615850e-47 |
Msa0715110 | Msa1386430 | 0.838551 | 2.688497e-57 | -8.615850e-47 |
Msa0720480 | Msa1386430 | 0.808649 | 2.791312e-50 | -8.615850e-47 |
Msa0726610 | Msa1386430 | 0.807329 | 5.330129e-50 | -8.615850e-47 |
Msa0743260 | Msa1386430 | 0.838855 | 2.243637e-57 | -8.615850e-47 |
Msa0756310 | Msa1386430 | 0.815163 | 1.063991e-51 | -8.615850e-47 |
Msa0757080 | Msa1386430 | 0.814559 | 1.448391e-51 | -8.615850e-47 |
Msa0775260 | Msa1386430 | 0.841234 | 5.376567e-58 | -8.615850e-47 |
Msa0789270 | Msa1386430 | 0.826343 | 2.857856e-54 | -8.615850e-47 |
Msa0789280 | Msa1386430 | 0.826504 | 2.615946e-54 | -8.615850e-47 |
Msa0789290 | Msa1386430 | 0.825664 | 4.143378e-54 | -8.615850e-47 |
Msa0789300 | Msa1386430 | 0.822733 | 2.022326e-53 | -8.615850e-47 |
Msa0791910 | Msa1386430 | 0.960605 | 9.536041e-119 | -8.615850e-47 |
Msa0798070 | Msa1386430 | 0.836078 | 1.155362e-56 | -8.615850e-47 |
Msa0812760 | Msa1386430 | 0.821282 | 4.386619e-53 | -8.615850e-47 |
Msa0835730 | Msa1386430 | 0.808524 | 2.969640e-50 | -8.615850e-47 |
Msa0836630 | Msa1386430 | 0.810198 | 1.298337e-50 | -8.615850e-47 |
Msa0151690 | Msa1386430 | 0.829954 | 3.854409e-55 | -8.615850e-47 |
Msa0152170 | Msa1386430 | 0.808036 | 3.772261e-50 | -8.615850e-47 |
Msa0178350 | Msa1386430 | 0.801931 | 7.133592e-49 | -8.615850e-47 |
Msa0184020 | Msa1386430 | 0.804236 | 2.379590e-49 | -8.615850e-47 |
Msa0188630 | Msa1386430 | 0.847932 | 8.456324e-60 | -8.615850e-47 |
Msa0193650 | Msa1386430 | 0.802485 | 5.486752e-49 | -8.615850e-47 |
Msa0208630 | Msa1386430 | 0.841981 | 3.415821e-58 | -8.615850e-47 |
Msa0217400 | Msa1386430 | 0.804801 | 1.814545e-49 | -8.615850e-47 |
Msa0222920 | Msa1386430 | 0.801809 | 7.555695e-49 | -8.615850e-47 |
Msa0223290 | Msa1386430 | 0.822297 | 2.554399e-53 | -8.615850e-47 |
Msa0223380 | Msa1386430 | 0.843580 | 1.283600e-58 | -8.615850e-47 |
Msa0230770 | Msa1386430 | 0.828876 | 7.043868e-55 | -8.615850e-47 |
Msa0236980 | Msa1386430 | 0.801235 | 9.909946e-49 | -8.615850e-47 |
Msa1229660 | Msa1386430 | 0.806477 | 8.072921e-50 | -8.615850e-47 |
Msa1233500 | Msa1386430 | 0.823078 | 1.680520e-53 | -8.615850e-47 |
Msa1233890 | Msa1386430 | 0.821853 | 3.237067e-53 | -8.615850e-47 |
Msa1237030 | Msa1386430 | 0.815472 | 9.084061e-52 | -8.615850e-47 |
Msa1238490 | Msa1386430 | 0.808778 | 2.620285e-50 | -8.615850e-47 |
Msa1252070 | Msa1386430 | 0.855864 | 4.737790e-62 | -8.615850e-47 |
Msa1258380 | Msa1386430 | -0.811302 | 7.493944e-51 | -8.615850e-47 |
Msa1265070 | Msa1386430 | 0.841104 | 5.815707e-58 | -8.615850e-47 |
Msa1271200 | Msa1386430 | 0.807015 | 6.213197e-50 | -8.615850e-47 |
Msa1272130 | Msa1386430 | 0.810428 | 1.158512e-50 | -8.615850e-47 |
Msa1275770 | Msa1386430 | 0.801453 | 8.940486e-49 | -8.615850e-47 |
Msa1280130 | Msa1386430 | 0.843935 | 1.031837e-58 | -8.615850e-47 |
Msa1284710 | Msa1386430 | 0.814000 | 1.925350e-51 | -8.615850e-47 |
Msa1289010 | Msa1386430 | 0.811598 | 6.462434e-51 | -8.615850e-47 |
Msa1292730 | Msa1386430 | 0.815313 | 9.854479e-52 | -8.615850e-47 |
Msa1300350 | Msa1386430 | -0.804544 | 2.053359e-49 | -8.615850e-47 |
Msa1306750 | Msa1386430 | 0.819662 | 1.032380e-52 | -8.615850e-47 |
Msa1308480 | Msa1386430 | 0.812190 | 4.801854e-51 | -8.615850e-47 |
Msa1308590 | Msa1386430 | 0.811414 | 7.083778e-51 | -8.615850e-47 |
Msa1316560 | Msa1386430 | -0.830914 | 2.245174e-55 | -8.615850e-47 |
Msa1328850 | Msa1386430 | 0.804742 | 1.866945e-49 | -8.615850e-47 |
Msa1337730 | Msa1386430 | 0.806256 | 8.983343e-50 | -8.615850e-47 |
Msa1340020 | Msa1386430 | 0.809249 | 2.077359e-50 | -8.615850e-47 |
Msa1340650 | Msa1386430 | 0.806487 | 8.032561e-50 | -8.615850e-47 |
Msa0365490 | Msa1386430 | 0.841823 | 3.762292e-58 | -8.615850e-47 |
Msa0376590 | Msa1386430 | 0.801561 | 8.495062e-49 | -8.615850e-47 |
Msa0377530 | Msa1386430 | 0.818002 | 2.459884e-52 | -8.615850e-47 |
Msa0380040 | Msa1386430 | 0.850990 | 1.187668e-60 | -8.615850e-47 |
Msa0389810 | Msa1386430 | 0.805512 | 1.288110e-49 | -8.615850e-47 |
Msa0392710 | Msa1386430 | 0.815043 | 1.131242e-51 | -8.615850e-47 |
Msa0426330 | Msa1386430 | 0.809840 | 1.550599e-50 | -8.615850e-47 |
Msa0429290 | Msa1386430 | 0.832160 | 1.107770e-55 | -8.615850e-47 |
Msa0437710 | Msa1386430 | 0.805843 | 1.097630e-49 | -8.615850e-47 |
Msa0442850 | Msa1386430 | 0.861675 | 8.687121e-64 | -8.615850e-47 |
Msa0449590 | Msa1386430 | -0.820123 | 8.099147e-53 | -8.615850e-47 |
Msa0449760 | Msa1386430 | 0.858160 | 9.968262e-63 | -8.615850e-47 |
Msa0449830 | Msa1386430 | 0.811964 | 5.379501e-51 | -8.615850e-47 |
Msa0457010 | Msa1386430 | 0.818190 | 2.230897e-52 | -8.615850e-47 |
Msa0458440 | Msa1386430 | 0.849051 | 4.143496e-60 | -8.615850e-47 |
Msa0464900 | Msa1386430 | 0.809899 | 1.506327e-50 | -8.615850e-47 |
Msa0468130 | Msa1386430 | 0.803047 | 4.199780e-49 | -8.615850e-47 |
Msa0473240 | Msa1386430 | 0.843574 | 1.288473e-58 | -8.615850e-47 |
Msa0475580 | Msa1386430 | 0.840582 | 7.973993e-58 | -8.615850e-47 |
Msa0480320 | Msa1386430 | 0.829837 | 4.115514e-55 | -8.615850e-47 |
Msa0480600 | Msa1386430 | 0.829701 | 4.443006e-55 | -8.615850e-47 |
Msa0482190 | Msa1386430 | -0.813254 | 2.809215e-51 | -8.615850e-47 |
Msa0988500 | Msa1386430 | 0.806721 | 7.170443e-50 | -8.615850e-47 |
Msa0992490 | Msa1386430 | -0.821633 | 3.639383e-53 | -8.615850e-47 |
Msa0993530 | Msa1386430 | 0.813969 | 1.955130e-51 | -8.615850e-47 |
Msa0999040 | Msa1386430 | 0.800266 | 1.562393e-48 | -8.615850e-47 |
Msa1000940 | Msa1386430 | 0.800989 | 1.112538e-48 | -8.615850e-47 |
Msa1015060 | Msa1386430 | 0.869020 | 4.231821e-66 | -8.615850e-47 |
Msa1019840 | Msa1386430 | -0.805804 | 1.118299e-49 | -8.615850e-47 |
Msa1026760 | Msa1386430 | 0.833689 | 4.617280e-56 | -8.615850e-47 |
Msa1026790 | Msa1386430 | 0.835797 | 1.361212e-56 | -8.615850e-47 |
Msa1039880 | Msa1386430 | 0.800476 | 1.416028e-48 | -8.615850e-47 |
Msa1047720 | Msa1386430 | 0.801941 | 7.098464e-49 | -8.615850e-47 |
Msa1056640 | Msa1386430 | 0.870367 | 1.540055e-66 | -8.615850e-47 |
Msa1068200 | Msa1386430 | -0.808466 | 3.055407e-50 | -8.615850e-47 |
Msa1072460 | Msa1386430 | -0.826894 | 2.111592e-54 | -8.615850e-47 |
Msa1075220 | Msa1386430 | -0.817666 | 2.929771e-52 | -8.615850e-47 |
Msa1087470 | Msa1386430 | 0.859904 | 2.994055e-63 | -8.615850e-47 |
Msa1087530 | Msa1386430 | 0.822738 | 2.017820e-53 | -8.615850e-47 |
Msa1090260 | Msa1386430 | 0.808611 | 2.845075e-50 | -8.615850e-47 |
Msa1092090 | Msa1386430 | 0.824582 | 7.467565e-54 | -8.615850e-47 |
Msa1092820 | Msa1386430 | 0.871108 | 8.781222e-67 | -8.615850e-47 |
Msa1097380 | Msa1386430 | 0.801749 | 7.774108e-49 | -8.615850e-47 |
Msa0240780 | Msa1386430 | 0.810002 | 1.431410e-50 | -8.615850e-47 |
Msa0244740 | Msa1386430 | 0.806442 | 8.211833e-50 | -8.615850e-47 |
Msa0252180 | Msa1386430 | 0.801576 | 8.435355e-49 | -8.615850e-47 |
Msa0258760 | Msa1386430 | 0.823858 | 1.104746e-53 | -8.615850e-47 |
Msa0260810 | Msa1386430 | 0.806691 | 7.274293e-50 | -8.615850e-47 |
Msa0260910 | Msa1386430 | 0.825804 | 3.839700e-54 | -8.615850e-47 |
Msa0265820 | Msa1386430 | 0.844994 | 5.355177e-59 | -8.615850e-47 |
Msa0266000 | Msa1386430 | -0.808691 | 2.734818e-50 | -8.615850e-47 |
Msa0269450 | Msa1386430 | 0.807026 | 6.179744e-50 | -8.615850e-47 |
Msa0270270 | Msa1386430 | 0.838852 | 2.247360e-57 | -8.615850e-47 |
Msa0282250 | Msa1386430 | 0.801226 | 9.949428e-49 | -8.615850e-47 |
Msa0296560 | Msa1386430 | 0.800269 | 1.559776e-48 | -8.615850e-47 |
Msa0296760 | Msa1386430 | 0.844219 | 8.655239e-59 | -8.615850e-47 |
Msa0313990 | Msa1386430 | 0.818285 | 2.122921e-52 | -8.615850e-47 |
Msa0315290 | Msa1386430 | 0.801454 | 8.935529e-49 | -8.615850e-47 |
Msa0323080 | Msa1386430 | 0.803837 | 2.880711e-49 | -8.615850e-47 |
Msa0326670 | Msa1386430 | 0.822055 | 2.906525e-53 | -8.615850e-47 |
Msa0335040 | Msa1386430 | 0.834144 | 3.552743e-56 | -8.615850e-47 |
Msa0344830 | Msa1386430 | 0.836375 | 9.711704e-57 | -8.615850e-47 |
Msa0356550 | Msa1386430 | -0.809390 | 1.937573e-50 | -8.615850e-47 |
Msa0356960 | Msa1386430 | 0.835695 | 1.444970e-56 | -8.615850e-47 |
Msa1109570 | Msa1386430 | 0.802395 | 5.725751e-49 | -8.615850e-47 |
Msa1113200 | Msa1386430 | 0.822127 | 2.797419e-53 | -8.615850e-47 |
Msa1116130 | Msa1386430 | -0.800693 | 1.278347e-48 | -8.615850e-47 |
Msa1116690 | Msa1386430 | 0.834389 | 3.083388e-56 | -8.615850e-47 |
Msa1131940 | Msa1386430 | -0.826677 | 2.378726e-54 | -8.615850e-47 |
Msa1139000 | Msa1386430 | -0.804869 | 1.756424e-49 | -8.615850e-47 |
Msa1162550 | Msa1386430 | -0.819099 | 1.387261e-52 | -8.615850e-47 |
Msa1205130 | Msa1386430 | 0.819820 | 9.502408e-53 | -8.615850e-47 |
Msa1206020 | Msa1386430 | 0.812158 | 4.880550e-51 | -8.615850e-47 |
Msa1219430 | Msa1386430 | 0.960440 | 1.466180e-118 | -8.615850e-47 |
Msa0485500 | Msa1386430 | -0.806395 | 8.399286e-50 | -8.615850e-47 |
Msa0490350 | Msa1386430 | 0.819607 | 1.062826e-52 | -8.615850e-47 |
Msa0497770 | Msa1386430 | -0.808185 | 3.507146e-50 | -8.615850e-47 |
Msa0505060 | Msa1386430 | 0.823443 | 1.381080e-53 | -8.615850e-47 |
Msa0508200 | Msa1386430 | 0.825654 | 4.167468e-54 | -8.615850e-47 |
Msa0509970 | Msa1386430 | 0.804400 | 2.200347e-49 | -8.615850e-47 |
Msa0514000 | Msa1386430 | 0.822062 | 2.896398e-53 | -8.615850e-47 |
Msa0516310 | Msa1386430 | 0.806615 | 7.546509e-50 | -8.615850e-47 |
Msa0517490 | Msa1386430 | 0.829325 | 5.483489e-55 | -8.615850e-47 |
Msa0519220 | Msa1386430 | 0.832408 | 9.616931e-56 | -8.615850e-47 |
Msa0528970 | Msa1386430 | 0.819098 | 1.388342e-52 | -8.615850e-47 |
Msa0535030 | Msa1386430 | 0.824341 | 8.505698e-54 | -8.615850e-47 |
Msa0535060 | Msa1386430 | 0.827109 | 1.875770e-54 | -8.615850e-47 |
Msa0540070 | Msa1386430 | 0.832025 | 1.196090e-55 | -8.615850e-47 |
Msa0540320 | Msa1386430 | 0.817652 | 2.950924e-52 | -8.615850e-47 |
Msa0543900 | Msa1386430 | 0.826268 | 2.977034e-54 | -8.615850e-47 |
Msa0549740 | Msa1386430 | 0.809825 | 1.562816e-50 | -8.615850e-47 |
Msa0553460 | Msa1386430 | 0.804094 | 2.547578e-49 | -8.615850e-47 |
Msa0578970 | Msa1386430 | 0.823409 | 1.406871e-53 | -8.615850e-47 |
Msa0581920 | Msa1386430 | 0.809212 | 2.115989e-50 | -8.615850e-47 |
Msa0582110 | Msa1386430 | 0.818308 | 2.097409e-52 | -8.615850e-47 |
Msa0585700 | Msa1386430 | 0.817993 | 2.471240e-52 | -8.615850e-47 |
Msa0587690 | Msa1386430 | 0.809173 | 2.156297e-50 | -8.615850e-47 |
Msa0591770 | Msa1386430 | 0.822663 | 2.099718e-53 | -8.615850e-47 |
Msa0596100 | Msa1386430 | 0.811105 | 8.266527e-51 | -8.615850e-47 |
Msa0598460 | Msa1386430 | 0.801755 | 7.751357e-49 | -8.615850e-47 |
Msa0599770 | Msa1386430 | 0.824460 | 7.975779e-54 | -8.615850e-47 |
Msa0846810 | Msa1386430 | 0.819276 | 1.264213e-52 | -8.615850e-47 |
Msa0847200 | Msa1386430 | 0.835317 | 1.800400e-56 | -8.615850e-47 |
Msa0853170 | Msa1386430 | 0.842499 | 2.491862e-58 | -8.615850e-47 |
Msa0877450 | Msa1386430 | 0.801644 | 8.168316e-49 | -8.615850e-47 |
Msa0893810 | Msa1386430 | 0.834875 | 2.327536e-56 | -8.615850e-47 |
Msa0896210 | Msa1386430 | 0.812030 | 5.204618e-51 | -8.615850e-47 |
Msa0907700 | Msa1386430 | 0.802302 | 5.982624e-49 | -8.615850e-47 |
Msa0908170 | Msa1386430 | 0.840064 | 1.088906e-57 | -8.615850e-47 |
Msa0910980 | Msa1386430 | -0.830870 | 2.301768e-55 | -8.615850e-47 |
Msa0927670 | Msa1386430 | 0.809230 | 2.096522e-50 | -8.615850e-47 |
Msa0935850 | Msa1386430 | 0.800832 | 1.197772e-48 | -8.615850e-47 |
Msa0937670 | Msa1386430 | 0.802180 | 6.339884e-49 | -8.615850e-47 |
Msa0976250 | Msa1386430 | 0.825827 | 3.791131e-54 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1386430 | MtrunA17_Chr4g0069441 | 88.116 | 345 | 22 | 3 | 1 | 330 | 1 | 341 | 2.01e-176 | 492 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1386430 | AT1G48300.1 | 36.813 | 364 | 169 | 14 | 1 | 318 | 1 | 349 | 1.95e-34 | 129 |
Find 85 sgRNAs with CRISPR-Local
Find 246 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GCTTCTGAATTACCTCAATT+AGG | 0.183509 | tig0020816:-49010 | Msa1386430:CDS |
TTCTCAAAAGCAAAGTATTA+TGG | 0.242646 | tig0020816:-47928 | Msa1386430:three_prime_UTR |
ACAATAACAACCACCGAAAA+AGG | 0.244300 | tig0020816:-49314 | Msa1386430:five_prime_UTR |
AATAATGCATCTCTTGTTAC+TGG | 0.282326 | tig0020816:-48416 | Msa1386430:CDS |
CTTCTGAATTACCTCAATTA+GGG | 0.289665 | tig0020816:-49009 | Msa1386430:CDS |
TTAAAATTCCCAATAAATAA+AGG | 0.304201 | tig0020816:+47864 | None:intergenic |
TGTTGATCTTAACATGGTTC+AGG | 0.306649 | tig0020816:-48189 | Msa1386430:CDS |
TCGGAGAGTGAGGGTGTCTA+TGG | 0.311445 | tig0020816:-49152 | Msa1386430:CDS |
GAATTCTGAATTCTCACATT+AGG | 0.340007 | tig0020816:+48212 | None:intergenic |
TACTTCACATCATCATGTTA+TGG | 0.361031 | tig0020816:-48453 | Msa1386430:CDS |
AATGAAACAAGAGAAGAAAA+AGG | 0.361365 | tig0020816:-48642 | Msa1386430:CDS |
TCCTAATCTACCTAATCTCT+TGG | 0.370750 | tig0020816:-48975 | Msa1386430:CDS |
ATATCATTGTTATTTGTCAT+TGG | 0.379429 | tig0020816:-47981 | Msa1386430:three_prime_UTR |
CCCAAGAGATTAGGTAGATT+AGG | 0.382872 | tig0020816:+48974 | None:intergenic |
CAAGAGTTTGAGAAGGTAGT+AGG | 0.384655 | tig0020816:-48293 | Msa1386430:CDS |
CACAAAGCCGGTGGATGAAT+TGG | 0.389932 | tig0020816:-48519 | Msa1386430:CDS |
CAATTCATCCACCGGCTTTG+TGG | 0.397930 | tig0020816:+48520 | None:intergenic |
GTCATCGTCATGGAGGTTTC+CGG | 0.398566 | tig0020816:-49244 | Msa1386430:exon |
TGTTGTTGGATGCAAGTGTA+TGG | 0.400360 | tig0020816:-48252 | Msa1386430:CDS |
GAAAGTAAGAGCAGGGGAGA+AGG | 0.401972 | tig0020816:-48678 | Msa1386430:CDS |
GAGAAGGTAGTAGGTGTTGA+AGG | 0.415252 | tig0020816:-48284 | Msa1386430:CDS |
TGAAGTTGACCCAAGAGATT+AGG | 0.430286 | tig0020816:+48965 | None:intergenic |
TGATGTGAAGTAGAATCTTC+AGG | 0.436223 | tig0020816:+48464 | None:intergenic |
GTTGATCTTAACATGGTTCA+GGG | 0.438643 | tig0020816:-48188 | Msa1386430:CDS |
GTGAGGGTGTCTATGGGGTC+TGG | 0.444353 | tig0020816:-49145 | Msa1386430:CDS |
CCAATGCAGAGAGGGTTACT+TGG | 0.447490 | tig0020816:+48143 | None:intergenic |
AGGAACAACGCCATGAGAAC+GGG | 0.451237 | tig0020816:+49174 | None:intergenic |
CGGAGAGTGAGGGTGTCTAT+GGG | 0.456153 | tig0020816:-49151 | Msa1386430:CDS |
TTCAATTCCAATTCATCCAC+CGG | 0.460806 | tig0020816:+48512 | None:intergenic |
GAAGGTGAAGGTGTTGTTGT+TGG | 0.461516 | tig0020816:-48266 | Msa1386430:CDS |
GTTCTCATGGCGTTGTTCCT+CGG | 0.476868 | tig0020816:-49171 | Msa1386430:CDS |
GAGCTAGAGAAAGTAAGAGC+AGG | 0.491556 | tig0020816:-48686 | Msa1386430:CDS |
GGGGTCTGGTTTCCATGATG+AGG | 0.505395 | tig0020816:-49131 | Msa1386430:CDS |
ACAACCTACATCTCCGGCGT+TGG | 0.506506 | tig0020816:-49205 | Msa1386430:CDS |
CCAAGTAACCCTCTCTGCAT+TGG | 0.508307 | tig0020816:-48143 | Msa1386430:CDS |
AAAGAGGATTGAAGTTTGCA+TGG | 0.512458 | tig0020816:-48354 | Msa1386430:CDS |
GGGTCTGGTTTCCATGATGA+GGG | 0.513644 | tig0020816:-49130 | Msa1386430:CDS |
TGGAGTTGGTCTAGAGGATG+TGG | 0.516198 | tig0020816:-48123 | Msa1386430:CDS |
CCTAATCTACCTAATCTCTT+GGG | 0.516487 | tig0020816:-48974 | Msa1386430:CDS |
GGGACTCACACCCGTTCTCA+TGG | 0.519048 | tig0020816:-49184 | Msa1386430:CDS |
AGGGGAGGATTACAAAGATG+TGG | 0.525816 | tig0020816:-48078 | Msa1386430:CDS |
TGAAGTAGAATCTTCAGGTA+TGG | 0.531707 | tig0020816:+48469 | None:intergenic |
AGTCCCAACGCCGGAGATGT+AGG | 0.532391 | tig0020816:+49201 | None:intergenic |
GACTATCACCGTCATCGTCA+TGG | 0.541050 | tig0020816:-49254 | Msa1386430:exon |
AACCCTCTCTGCATTGGAGT+TGG | 0.545052 | tig0020816:-48137 | Msa1386430:CDS |
CTGCATTGGAGTTGGTCTAG+AGG | 0.545072 | tig0020816:-48129 | Msa1386430:CDS |
AGCTAGAGAAAGTAAGAGCA+GGG | 0.546581 | tig0020816:-48685 | Msa1386430:CDS |
GTTGTTGGATGCAAGTGTAT+GGG | 0.547984 | tig0020816:-48251 | Msa1386430:CDS |
ATAATGCATCTCTTGTTACT+GGG | 0.551376 | tig0020816:-48415 | Msa1386430:CDS |
GCGTTGTTCCTCGGAGAGTG+AGG | 0.551861 | tig0020816:-49162 | Msa1386430:CDS |
TTATCCCTGCAGCTCAAAAG+AGG | 0.567917 | tig0020816:-48370 | Msa1386430:CDS |
ACTGCACGTGACCCTCATCA+TGG | 0.571166 | tig0020816:+49119 | None:intergenic |
AAGAGGATTGAAGTTTGCAT+GGG | 0.571804 | tig0020816:-48353 | Msa1386430:CDS |
GACCAACTCCAATGCAGAGA+GGG | 0.577245 | tig0020816:+48135 | None:intergenic |
TTGTTGGATGCAAGTGTATG+GGG | 0.578412 | tig0020816:-48250 | Msa1386430:CDS |
ATCACTTGACTCAGATTCAG+AGG | 0.579827 | tig0020816:+48559 | None:intergenic |
GAGGAACAACGCCATGAGAA+CGG | 0.580124 | tig0020816:+49173 | None:intergenic |
TGTACGACGGAGAACGGTGC+CGG | 0.582122 | tig0020816:+49225 | None:intergenic |
CGTTGTTCCTCGGAGAGTGA+GGG | 0.586366 | tig0020816:-49161 | Msa1386430:CDS |
TGTTGAGCAAACCCTAATTG+AGG | 0.593503 | tig0020816:+48998 | None:intergenic |
ATGTGGATACCATTGTGGCT+AGG | 0.594294 | tig0020816:-48106 | Msa1386430:CDS |
GTAGTAGGTGTTGAAGGTGA+AGG | 0.594774 | tig0020816:-48278 | Msa1386430:CDS |
GGATTACAAAGATGTGGGTA+CGG | 0.595227 | tig0020816:-48072 | Msa1386430:CDS |
GAATTCTGTTGATCTTAACA+TGG | 0.597830 | tig0020816:-48195 | Msa1386430:CDS |
GGGGAGGATTACAAAGATGT+GGG | 0.600350 | tig0020816:-48077 | Msa1386430:CDS |
CGTCGTACAACCTACATCTC+CGG | 0.602217 | tig0020816:-49211 | Msa1386430:CDS |
GTAGGTTGTACGACGGAGAA+CGG | 0.604515 | tig0020816:+49219 | None:intergenic |
TTACATGAATAGATGCAGGA+TGG | 0.624402 | tig0020816:-48728 | Msa1386430:intron |
GGAAACCTCCATGACGATGA+CGG | 0.624471 | tig0020816:+49246 | None:intergenic |
GCTAGAGAAAGTAAGAGCAG+GGG | 0.626526 | tig0020816:-48684 | Msa1386430:CDS |
TCTTCAGGTATGGATAGCAT+AGG | 0.636532 | tig0020816:+48479 | None:intergenic |
ATTGTTACAAGAGTTTGAGA+AGG | 0.637353 | tig0020816:-48300 | Msa1386430:CDS |
TTGTGATGTTGCCACAAAGC+CGG | 0.644781 | tig0020816:-48531 | Msa1386430:CDS |
TGATGTTGCCACAAAGCCGG+TGG | 0.654844 | tig0020816:-48528 | Msa1386430:CDS |
GTTTAAGAAAGAGACTAATG+TGG | 0.658207 | tig0020816:-48393 | Msa1386430:CDS |
AGAGGATGTGGATACCATTG+TGG | 0.664578 | tig0020816:-48111 | Msa1386430:CDS |
ACGGGTGTGAGTCCCAACGC+CGG | 0.672451 | tig0020816:+49192 | None:intergenic |
GGAGAGTGAGGGTGTCTATG+GGG | 0.673193 | tig0020816:-49150 | Msa1386430:CDS |
ATAGACACCCTCACTCTCCG+AGG | 0.695788 | tig0020816:+49154 | None:intergenic |
AGACCAACTCCAATGCAGAG+AGG | 0.696753 | tig0020816:+48134 | None:intergenic |
CATGAATAGATGCAGGATGG+TGG | 0.702277 | tig0020816:-48725 | Msa1386430:intron |
ATTGTATATATGTGTCAGCG+TGG | 0.721744 | tig0020816:-48009 | Msa1386430:three_prime_UTR |
TATCACCGTCATCGTCATGG+AGG | 0.734877 | tig0020816:-49251 | Msa1386430:exon |
CGGAGATGTAGGTTGTACGA+CGG | 0.747412 | tig0020816:+49212 | None:intergenic |
TCAACTTCACCAAAGCCTCG+CGG | 0.751601 | tig0020816:-48951 | Msa1386430:intron |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATAAAAATAAAAGAAAAAG+GGG | + | tig0020816:48269-48288 | None:intergenic | 10.0% |
!!! | TAATACGTTTTTTTTTTTAA+AGG | + | tig0020816:49287-49306 | None:intergenic | 10.0% |
!! | TTAAAAAAAAAAACGTATTA+TGG | - | tig0020816:49287-49306 | Msa1386430:five_prime_UTR | 10.0% |
!!! | ATTTTATTTCCTTTATTTAT+TGG | - | tig0020816:49310-49329 | Msa1386430:five_prime_UTR | 10.0% |
!!! | TTTTATTTCCTTTATTTATT+GGG | - | tig0020816:49311-49330 | Msa1386430:five_prime_UTR | 10.0% |
!! | AATAAAAATAAAAGAAAAAG+GGG | + | tig0020816:48269-48288 | None:intergenic | 10.0% |
!!! | TAATACGTTTTTTTTTTTAA+AGG | + | tig0020816:49287-49306 | None:intergenic | 10.0% |
!! | TTAAAAAAAAAAACGTATTA+TGG | - | tig0020816:49287-49306 | Msa1386430:five_prime_UTR | 10.0% |
!!! | ATTTTATTTCCTTTATTTAT+TGG | - | tig0020816:49310-49329 | Msa1386430:five_prime_UTR | 10.0% |
!!! | TTTTATTTCCTTTATTTATT+GGG | - | tig0020816:49311-49330 | Msa1386430:five_prime_UTR | 10.0% |
!! | TTAAAATTCCCAATAAATAA+AGG | + | tig0020816:49322-49341 | None:intergenic | 15.0% |
!! | TTAAAATTCCCAATAAATAA+AGG | + | tig0020816:49322-49341 | None:intergenic | 15.0% |
!! | GAATTTGTGGTATAAATAAA+GGG | + | tig0020816:48379-48398 | None:intergenic | 20.0% |
!!! | TTTATTACAAGTTTTCATCT+TGG | + | tig0020816:48582-48601 | None:intergenic | 20.0% |
!!! | ATATCATTGTTATTTGTCAT+TGG | - | tig0020816:49202-49221 | Msa1386430:CDS | 20.0% |
!! | AAAAATATAGTCATGTATTG+TGG | - | tig0020816:49229-49248 | Msa1386430:CDS | 20.0% |
!! | GAATTTGTGGTATAAATAAA+GGG | + | tig0020816:48379-48398 | None:intergenic | 20.0% |
!!! | TTTATTACAAGTTTTCATCT+TGG | + | tig0020816:48582-48601 | None:intergenic | 20.0% |
!!! | ATATCATTGTTATTTGTCAT+TGG | - | tig0020816:49202-49221 | Msa1386430:CDS | 20.0% |
!! | AAAAATATAGTCATGTATTG+TGG | - | tig0020816:49229-49248 | Msa1386430:CDS | 20.0% |
!!! | CAAAGTATTGTTTCCTTTTT+CGG | + | tig0020816:47885-47904 | None:intergenic | 25.0% |
! | ATCTTTAATTCAGAATCTGA+AGG | + | tig0020816:48322-48341 | None:intergenic | 25.0% |
! | GGAATTTGTGGTATAAATAA+AGG | + | tig0020816:48380-48399 | None:intergenic | 25.0% |
! | ATCATCATAATTGGAATTTG+TGG | + | tig0020816:48392-48411 | None:intergenic | 25.0% |
! | ATCATCATCATCATCATAAT+TGG | + | tig0020816:48401-48420 | None:intergenic | 25.0% |
!!! | TTTTTTACATGAATAGATGC+AGG | - | tig0020816:48451-48470 | Msa1386430:CDS | 25.0% |
! | AATGAAACAAGAGAAGAAAA+AGG | - | tig0020816:48541-48560 | Msa1386430:CDS | 25.0% |
! | GTAACAAATGCAAAAAATCA+GGG | - | tig0020816:48852-48871 | Msa1386430:intron | 25.0% |
! | TAACAAATGCAAAAAATCAG+GGG | - | tig0020816:48853-48872 | Msa1386430:intron | 25.0% |
!! | TTCTCAAAAGCAAAGTATTA+TGG | - | tig0020816:49255-49274 | Msa1386430:exon | 25.0% |
!! | TTGTGTTGTGTTATCTTTTT+GGG | + | tig0020816:47841-47860 | None:intergenic | 25.0% |
!!! | CAAAGTATTGTTTCCTTTTT+CGG | + | tig0020816:47885-47904 | None:intergenic | 25.0% |
! | ATCTTTAATTCAGAATCTGA+AGG | + | tig0020816:48322-48341 | None:intergenic | 25.0% |
! | GGAATTTGTGGTATAAATAA+AGG | + | tig0020816:48380-48399 | None:intergenic | 25.0% |
! | ATCATCATAATTGGAATTTG+TGG | + | tig0020816:48392-48411 | None:intergenic | 25.0% |
! | ATCATCATCATCATCATAAT+TGG | + | tig0020816:48401-48420 | None:intergenic | 25.0% |
!!! | TTTTTTACATGAATAGATGC+AGG | - | tig0020816:48451-48470 | Msa1386430:CDS | 25.0% |
! | AATGAAACAAGAGAAGAAAA+AGG | - | tig0020816:48541-48560 | Msa1386430:CDS | 25.0% |
! | GTAACAAATGCAAAAAATCA+GGG | - | tig0020816:48852-48871 | Msa1386430:intron | 25.0% |
! | TAACAAATGCAAAAAATCAG+GGG | - | tig0020816:48853-48872 | Msa1386430:intron | 25.0% |
!! | TTCTCAAAAGCAAAGTATTA+TGG | - | tig0020816:49255-49274 | Msa1386430:exon | 25.0% |
CTTCTGAATTACCTCAATTA+GGG | - | tig0020816:48174-48193 | Msa1386430:CDS | 30.0% | |
!!! | TTTTTTCCTGTTTCTTGTTG+TGG | - | tig0020816:48347-48366 | Msa1386430:CDS | 30.0% |
!! | TTTTTCCTGTTTCTTGTTGT+GGG | - | tig0020816:48348-48367 | Msa1386430:CDS | 30.0% |
! | TTACAAGTTTTCATCTTGGA+GGG | + | tig0020816:48578-48597 | None:intergenic | 30.0% |
! | ATTACAAGTTTTCATCTTGG+AGG | + | tig0020816:48579-48598 | None:intergenic | 30.0% |
TACTTCACATCATCATGTTA+TGG | - | tig0020816:48730-48749 | Msa1386430:intron | 30.0% | |
AATAATGCATCTCTTGTTAC+TGG | - | tig0020816:48767-48786 | Msa1386430:intron | 30.0% | |
ATAATGCATCTCTTGTTACT+GGG | - | tig0020816:48768-48787 | Msa1386430:intron | 30.0% | |
GTTTAAGAAAGAGACTAATG+TGG | - | tig0020816:48790-48809 | Msa1386430:intron | 30.0% | |
GGTAACAAATGCAAAAAATC+AGG | - | tig0020816:48851-48870 | Msa1386430:intron | 30.0% | |
ATTGTTACAAGAGTTTGAGA+AGG | - | tig0020816:48883-48902 | Msa1386430:intron | 30.0% | |
GAATTCTGAATTCTCACATT+AGG | + | tig0020816:48974-48993 | None:intergenic | 30.0% | |
GAATTCTGTTGATCTTAACA+TGG | - | tig0020816:48988-49007 | Msa1386430:CDS | 30.0% | |
! | GTTGTGTTGTGTTATCTTTT+TGG | + | tig0020816:47842-47861 | None:intergenic | 30.0% |
CTTCTGAATTACCTCAATTA+GGG | - | tig0020816:48174-48193 | Msa1386430:CDS | 30.0% | |
!!! | TTTTTTCCTGTTTCTTGTTG+TGG | - | tig0020816:48347-48366 | Msa1386430:CDS | 30.0% |
!! | TTTTTCCTGTTTCTTGTTGT+GGG | - | tig0020816:48348-48367 | Msa1386430:CDS | 30.0% |
! | TTACAAGTTTTCATCTTGGA+GGG | + | tig0020816:48578-48597 | None:intergenic | 30.0% |
! | ATTACAAGTTTTCATCTTGG+AGG | + | tig0020816:48579-48598 | None:intergenic | 30.0% |
TACTTCACATCATCATGTTA+TGG | - | tig0020816:48730-48749 | Msa1386430:intron | 30.0% | |
AATAATGCATCTCTTGTTAC+TGG | - | tig0020816:48767-48786 | Msa1386430:intron | 30.0% | |
ATAATGCATCTCTTGTTACT+GGG | - | tig0020816:48768-48787 | Msa1386430:intron | 30.0% | |
GTTTAAGAAAGAGACTAATG+TGG | - | tig0020816:48790-48809 | Msa1386430:intron | 30.0% | |
GGTAACAAATGCAAAAAATC+AGG | - | tig0020816:48851-48870 | Msa1386430:intron | 30.0% | |
ATTGTTACAAGAGTTTGAGA+AGG | - | tig0020816:48883-48902 | Msa1386430:intron | 30.0% | |
GAATTCTGAATTCTCACATT+AGG | + | tig0020816:48974-48993 | None:intergenic | 30.0% | |
GAATTCTGTTGATCTTAACA+TGG | - | tig0020816:48988-49007 | Msa1386430:CDS | 30.0% | |
ACAATAACAACCACCGAAAA+AGG | - | tig0020816:47869-47888 | Msa1386430:three_prime_UTR | 35.0% | |
!!! | AGTATTGTTTCCTTTTTCGG+TGG | + | tig0020816:47882-47901 | None:intergenic | 35.0% |
!!! | CTGTTTTTTTCTTCACGTCT+TGG | + | tig0020816:48094-48113 | None:intergenic | 35.0% |
GCTTCTGAATTACCTCAATT+AGG | - | tig0020816:48173-48192 | Msa1386430:CDS | 35.0% | |
TCCTAATCTACCTAATCTCT+TGG | - | tig0020816:48208-48227 | Msa1386430:CDS | 35.0% | |
CCTAATCTACCTAATCTCTT+GGG | - | tig0020816:48209-48228 | Msa1386430:CDS | 35.0% | |
!! | TTTTCCTGTTTCTTGTTGTG+GGG | - | tig0020816:48349-48368 | Msa1386430:CDS | 35.0% |
TTACATGAATAGATGCAGGA+TGG | - | tig0020816:48455-48474 | Msa1386430:CDS | 35.0% | |
TTCAATTCCAATTCATCCAC+CGG | + | tig0020816:48674-48693 | None:intergenic | 35.0% | |
TGAAGTAGAATCTTCAGGTA+TGG | + | tig0020816:48717-48736 | None:intergenic | 35.0% | |
TGATGTGAAGTAGAATCTTC+AGG | + | tig0020816:48722-48741 | None:intergenic | 35.0% | |
AAAGAGGATTGAAGTTTGCA+TGG | - | tig0020816:48829-48848 | Msa1386430:intron | 35.0% | |
AAGAGGATTGAAGTTTGCAT+GGG | - | tig0020816:48830-48849 | Msa1386430:intron | 35.0% | |
TGTTGATCTTAACATGGTTC+AGG | - | tig0020816:48994-49013 | Msa1386430:CDS | 35.0% | |
GTTGATCTTAACATGGTTCA+GGG | - | tig0020816:48995-49014 | Msa1386430:CDS | 35.0% | |
ATTGTATATATGTGTCAGCG+TGG | - | tig0020816:49174-49193 | Msa1386430:CDS | 35.0% | |
ACAATAACAACCACCGAAAA+AGG | - | tig0020816:47869-47888 | Msa1386430:three_prime_UTR | 35.0% | |
!!! | AGTATTGTTTCCTTTTTCGG+TGG | + | tig0020816:47882-47901 | None:intergenic | 35.0% |
!!! | CTGTTTTTTTCTTCACGTCT+TGG | + | tig0020816:48094-48113 | None:intergenic | 35.0% |
GCTTCTGAATTACCTCAATT+AGG | - | tig0020816:48173-48192 | Msa1386430:CDS | 35.0% | |
TCCTAATCTACCTAATCTCT+TGG | - | tig0020816:48208-48227 | Msa1386430:CDS | 35.0% | |
CCTAATCTACCTAATCTCTT+GGG | - | tig0020816:48209-48228 | Msa1386430:CDS | 35.0% | |
!! | TTTTCCTGTTTCTTGTTGTG+GGG | - | tig0020816:48349-48368 | Msa1386430:CDS | 35.0% |
TTACATGAATAGATGCAGGA+TGG | - | tig0020816:48455-48474 | Msa1386430:CDS | 35.0% | |
TTCAATTCCAATTCATCCAC+CGG | + | tig0020816:48674-48693 | None:intergenic | 35.0% | |
TGAAGTAGAATCTTCAGGTA+TGG | + | tig0020816:48717-48736 | None:intergenic | 35.0% | |
TGATGTGAAGTAGAATCTTC+AGG | + | tig0020816:48722-48741 | None:intergenic | 35.0% | |
AAAGAGGATTGAAGTTTGCA+TGG | - | tig0020816:48829-48848 | Msa1386430:intron | 35.0% | |
AAGAGGATTGAAGTTTGCAT+GGG | - | tig0020816:48830-48849 | Msa1386430:intron | 35.0% | |
TGTTGATCTTAACATGGTTC+AGG | - | tig0020816:48994-49013 | Msa1386430:CDS | 35.0% | |
GTTGATCTTAACATGGTTCA+GGG | - | tig0020816:48995-49014 | Msa1386430:CDS | 35.0% | |
ATTGTATATATGTGTCAGCG+TGG | - | tig0020816:49174-49193 | Msa1386430:CDS | 35.0% | |
TGTTGAGCAAACCCTAATTG+AGG | + | tig0020816:48188-48207 | None:intergenic | 40.0% | |
CCCAAGAGATTAGGTAGATT+AGG | + | tig0020816:48212-48231 | None:intergenic | 40.0% | |
TGAAGTTGACCCAAGAGATT+AGG | + | tig0020816:48221-48240 | None:intergenic | 40.0% | |
AAAACCCCACAACAAGAAAC+AGG | + | tig0020816:48356-48375 | None:intergenic | 40.0% | |
AGCTAGAGAAAGTAAGAGCA+GGG | - | tig0020816:48498-48517 | Msa1386430:CDS | 40.0% | |
ATCACTTGACTCAGATTCAG+AGG | + | tig0020816:48627-48646 | None:intergenic | 40.0% | |
TCTTCAGGTATGGATAGCAT+AGG | + | tig0020816:48707-48726 | None:intergenic | 40.0% | |
CAAGAGTTTGAGAAGGTAGT+AGG | - | tig0020816:48890-48909 | Msa1386430:intron | 40.0% | |
TGTTGTTGGATGCAAGTGTA+TGG | - | tig0020816:48931-48950 | Msa1386430:intron | 40.0% | |
GTTGTTGGATGCAAGTGTAT+GGG | - | tig0020816:48932-48951 | Msa1386430:intron | 40.0% | |
TTGTTGGATGCAAGTGTATG+GGG | - | tig0020816:48933-48952 | Msa1386430:intron | 40.0% | |
! | ACCATTGTGGCTAGGTTTTT+AGG | - | tig0020816:49085-49104 | Msa1386430:CDS | 40.0% |
! | CCATTGTGGCTAGGTTTTTA+GGG | - | tig0020816:49086-49105 | Msa1386430:CDS | 40.0% |
!! | CATTGTGGCTAGGTTTTTAG+GGG | - | tig0020816:49087-49106 | Msa1386430:CDS | 40.0% |
GGATTACAAAGATGTGGGTA+CGG | - | tig0020816:49111-49130 | Msa1386430:CDS | 40.0% | |
TGTTGAGCAAACCCTAATTG+AGG | + | tig0020816:48188-48207 | None:intergenic | 40.0% | |
CCCAAGAGATTAGGTAGATT+AGG | + | tig0020816:48212-48231 | None:intergenic | 40.0% | |
TGAAGTTGACCCAAGAGATT+AGG | + | tig0020816:48221-48240 | None:intergenic | 40.0% | |
AAAACCCCACAACAAGAAAC+AGG | + | tig0020816:48356-48375 | None:intergenic | 40.0% | |
AGCTAGAGAAAGTAAGAGCA+GGG | - | tig0020816:48498-48517 | Msa1386430:CDS | 40.0% | |
ATCACTTGACTCAGATTCAG+AGG | + | tig0020816:48627-48646 | None:intergenic | 40.0% | |
TCTTCAGGTATGGATAGCAT+AGG | + | tig0020816:48707-48726 | None:intergenic | 40.0% | |
CAAGAGTTTGAGAAGGTAGT+AGG | - | tig0020816:48890-48909 | Msa1386430:intron | 40.0% | |
TGTTGTTGGATGCAAGTGTA+TGG | - | tig0020816:48931-48950 | Msa1386430:intron | 40.0% | |
GTTGTTGGATGCAAGTGTAT+GGG | - | tig0020816:48932-48951 | Msa1386430:intron | 40.0% | |
TTGTTGGATGCAAGTGTATG+GGG | - | tig0020816:48933-48952 | Msa1386430:intron | 40.0% | |
! | ACCATTGTGGCTAGGTTTTT+AGG | - | tig0020816:49085-49104 | Msa1386430:CDS | 40.0% |
! | CCATTGTGGCTAGGTTTTTA+GGG | - | tig0020816:49086-49105 | Msa1386430:CDS | 40.0% |
!! | CATTGTGGCTAGGTTTTTAG+GGG | - | tig0020816:49087-49106 | Msa1386430:CDS | 40.0% |
GGATTACAAAGATGTGGGTA+CGG | - | tig0020816:49111-49130 | Msa1386430:CDS | 40.0% | |
!! | AAAAAAGTACCGCGAGGCTT+TGG | + | tig0020816:48244-48263 | None:intergenic | 45.0% |
CATGAATAGATGCAGGATGG+TGG | - | tig0020816:48458-48477 | Msa1386430:CDS | 45.0% | |
GAGCTAGAGAAAGTAAGAGC+AGG | - | tig0020816:48497-48516 | Msa1386430:CDS | 45.0% | |
GCTAGAGAAAGTAAGAGCAG+GGG | - | tig0020816:48499-48518 | Msa1386430:CDS | 45.0% | |
TTGTGATGTTGCCACAAAGC+CGG | - | tig0020816:48652-48671 | Msa1386430:CDS | 45.0% | |
TTATCCCTGCAGCTCAAAAG+AGG | - | tig0020816:48813-48832 | Msa1386430:intron | 45.0% | |
! | CAATCCTCTTTTGAGCTGCA+GGG | + | tig0020816:48820-48839 | None:intergenic | 45.0% |
! | TCAATCCTCTTTTGAGCTGC+AGG | + | tig0020816:48821-48840 | None:intergenic | 45.0% |
!! | GAGAAGGTAGTAGGTGTTGA+AGG | - | tig0020816:48899-48918 | Msa1386430:intron | 45.0% |
!! | GTAGTAGGTGTTGAAGGTGA+AGG | - | tig0020816:48905-48924 | Msa1386430:intron | 45.0% |
!! | GAAGGTGAAGGTGTTGTTGT+TGG | - | tig0020816:48917-48936 | Msa1386430:intron | 45.0% |
AGAGGATGTGGATACCATTG+TGG | - | tig0020816:49072-49091 | Msa1386430:CDS | 45.0% | |
ATGTGGATACCATTGTGGCT+AGG | - | tig0020816:49077-49096 | Msa1386430:CDS | 45.0% | |
CCCTAAAAACCTAGCCACAA+TGG | + | tig0020816:49089-49108 | None:intergenic | 45.0% | |
AGGGGAGGATTACAAAGATG+TGG | - | tig0020816:49105-49124 | Msa1386430:CDS | 45.0% | |
GGGGAGGATTACAAAGATGT+GGG | - | tig0020816:49106-49125 | Msa1386430:CDS | 45.0% | |
!! | AAAAAAGTACCGCGAGGCTT+TGG | + | tig0020816:48244-48263 | None:intergenic | 45.0% |
CATGAATAGATGCAGGATGG+TGG | - | tig0020816:48458-48477 | Msa1386430:CDS | 45.0% | |
GAGCTAGAGAAAGTAAGAGC+AGG | - | tig0020816:48497-48516 | Msa1386430:CDS | 45.0% | |
GCTAGAGAAAGTAAGAGCAG+GGG | - | tig0020816:48499-48518 | Msa1386430:CDS | 45.0% | |
TTGTGATGTTGCCACAAAGC+CGG | - | tig0020816:48652-48671 | Msa1386430:CDS | 45.0% | |
TTATCCCTGCAGCTCAAAAG+AGG | - | tig0020816:48813-48832 | Msa1386430:intron | 45.0% | |
! | CAATCCTCTTTTGAGCTGCA+GGG | + | tig0020816:48820-48839 | None:intergenic | 45.0% |
! | TCAATCCTCTTTTGAGCTGC+AGG | + | tig0020816:48821-48840 | None:intergenic | 45.0% |
!! | GAGAAGGTAGTAGGTGTTGA+AGG | - | tig0020816:48899-48918 | Msa1386430:intron | 45.0% |
!! | GTAGTAGGTGTTGAAGGTGA+AGG | - | tig0020816:48905-48924 | Msa1386430:intron | 45.0% |
!! | GAAGGTGAAGGTGTTGTTGT+TGG | - | tig0020816:48917-48936 | Msa1386430:intron | 45.0% |
AGAGGATGTGGATACCATTG+TGG | - | tig0020816:49072-49091 | Msa1386430:CDS | 45.0% | |
ATGTGGATACCATTGTGGCT+AGG | - | tig0020816:49077-49096 | Msa1386430:CDS | 45.0% | |
CCCTAAAAACCTAGCCACAA+TGG | + | tig0020816:49089-49108 | None:intergenic | 45.0% | |
AGGGGAGGATTACAAAGATG+TGG | - | tig0020816:49105-49124 | Msa1386430:CDS | 45.0% | |
GGGGAGGATTACAAAGATGT+GGG | - | tig0020816:49106-49125 | Msa1386430:CDS | 45.0% | |
!! | TAATAAAAATAAAAGAAAAA+GGG | + | tig0020816:48270-48289 | None:intergenic | 5.0% |
!! | ATAATAAAAATAAAAGAAAA+AGG | + | tig0020816:48271-48290 | None:intergenic | 5.0% |
!! | TAATAAAAATAAAAGAAAAA+GGG | + | tig0020816:48270-48289 | None:intergenic | 5.0% |
!! | ATAATAAAAATAAAAGAAAA+AGG | + | tig0020816:48271-48290 | None:intergenic | 5.0% |
GACTATCACCGTCATCGTCA+TGG | - | tig0020816:47929-47948 | Msa1386430:three_prime_UTR | 50.0% | |
TATCACCGTCATCGTCATGG+AGG | - | tig0020816:47932-47951 | Msa1386430:three_prime_UTR | 50.0% | |
GGAAACCTCCATGACGATGA+CGG | + | tig0020816:47940-47959 | None:intergenic | 50.0% | |
GTCATCGTCATGGAGGTTTC+CGG | - | tig0020816:47939-47958 | Msa1386430:three_prime_UTR | 50.0% | |
GTAGGTTGTACGACGGAGAA+CGG | + | tig0020816:47967-47986 | None:intergenic | 50.0% | |
CGGAGATGTAGGTTGTACGA+CGG | + | tig0020816:47974-47993 | None:intergenic | 50.0% | |
CGTCGTACAACCTACATCTC+CGG | - | tig0020816:47972-47991 | Msa1386430:three_prime_UTR | 50.0% | |
AGGAACAACGCCATGAGAAC+GGG | + | tig0020816:48012-48031 | None:intergenic | 50.0% | |
GAGGAACAACGCCATGAGAA+CGG | + | tig0020816:48013-48032 | None:intergenic | 50.0% | |
GTTCTCATGGCGTTGTTCCT+CGG | - | tig0020816:48012-48031 | Msa1386430:three_prime_UTR | 50.0% | |
! | GGGTCTGGTTTCCATGATGA+GGG | - | tig0020816:48053-48072 | Msa1386430:CDS | 50.0% |
TCAACTTCACCAAAGCCTCG+CGG | - | tig0020816:48232-48251 | Msa1386430:CDS | 50.0% | |
GAAAGTAAGAGCAGGGGAGA+AGG | - | tig0020816:48505-48524 | Msa1386430:CDS | 50.0% | |
!! | CAATTCATCCACCGGCTTTG+TGG | + | tig0020816:48666-48685 | None:intergenic | 50.0% |
CACAAAGCCGGTGGATGAAT+TGG | - | tig0020816:48664-48683 | Msa1386430:CDS | 50.0% | |
CCAATGCAGAGAGGGTTACT+TGG | + | tig0020816:49043-49062 | None:intergenic | 50.0% | |
CCAAGTAACCCTCTCTGCAT+TGG | - | tig0020816:49040-49059 | Msa1386430:CDS | 50.0% | |
AACCCTCTCTGCATTGGAGT+TGG | - | tig0020816:49046-49065 | Msa1386430:CDS | 50.0% | |
GACCAACTCCAATGCAGAGA+GGG | + | tig0020816:49051-49070 | None:intergenic | 50.0% | |
AGACCAACTCCAATGCAGAG+AGG | + | tig0020816:49052-49071 | None:intergenic | 50.0% | |
! | CTGCATTGGAGTTGGTCTAG+AGG | - | tig0020816:49054-49073 | Msa1386430:CDS | 50.0% |
! | TGGAGTTGGTCTAGAGGATG+TGG | - | tig0020816:49060-49079 | Msa1386430:CDS | 50.0% |
!! | TGTGGCTAGGTTTTTAGGGG+AGG | - | tig0020816:49090-49109 | Msa1386430:CDS | 50.0% |
GACTATCACCGTCATCGTCA+TGG | - | tig0020816:47929-47948 | Msa1386430:three_prime_UTR | 50.0% | |
TATCACCGTCATCGTCATGG+AGG | - | tig0020816:47932-47951 | Msa1386430:three_prime_UTR | 50.0% | |
GGAAACCTCCATGACGATGA+CGG | + | tig0020816:47940-47959 | None:intergenic | 50.0% | |
GTCATCGTCATGGAGGTTTC+CGG | - | tig0020816:47939-47958 | Msa1386430:three_prime_UTR | 50.0% | |
GTAGGTTGTACGACGGAGAA+CGG | + | tig0020816:47967-47986 | None:intergenic | 50.0% | |
CGGAGATGTAGGTTGTACGA+CGG | + | tig0020816:47974-47993 | None:intergenic | 50.0% | |
CGTCGTACAACCTACATCTC+CGG | - | tig0020816:47972-47991 | Msa1386430:three_prime_UTR | 50.0% | |
AGGAACAACGCCATGAGAAC+GGG | + | tig0020816:48012-48031 | None:intergenic | 50.0% | |
GAGGAACAACGCCATGAGAA+CGG | + | tig0020816:48013-48032 | None:intergenic | 50.0% | |
GTTCTCATGGCGTTGTTCCT+CGG | - | tig0020816:48012-48031 | Msa1386430:three_prime_UTR | 50.0% | |
! | GGGTCTGGTTTCCATGATGA+GGG | - | tig0020816:48053-48072 | Msa1386430:CDS | 50.0% |
TCAACTTCACCAAAGCCTCG+CGG | - | tig0020816:48232-48251 | Msa1386430:CDS | 50.0% | |
GAAAGTAAGAGCAGGGGAGA+AGG | - | tig0020816:48505-48524 | Msa1386430:CDS | 50.0% | |
!! | CAATTCATCCACCGGCTTTG+TGG | + | tig0020816:48666-48685 | None:intergenic | 50.0% |
CACAAAGCCGGTGGATGAAT+TGG | - | tig0020816:48664-48683 | Msa1386430:CDS | 50.0% | |
CCAATGCAGAGAGGGTTACT+TGG | + | tig0020816:49043-49062 | None:intergenic | 50.0% | |
CCAAGTAACCCTCTCTGCAT+TGG | - | tig0020816:49040-49059 | Msa1386430:CDS | 50.0% | |
AACCCTCTCTGCATTGGAGT+TGG | - | tig0020816:49046-49065 | Msa1386430:CDS | 50.0% | |
GACCAACTCCAATGCAGAGA+GGG | + | tig0020816:49051-49070 | None:intergenic | 50.0% | |
AGACCAACTCCAATGCAGAG+AGG | + | tig0020816:49052-49071 | None:intergenic | 50.0% | |
! | CTGCATTGGAGTTGGTCTAG+AGG | - | tig0020816:49054-49073 | Msa1386430:CDS | 50.0% |
! | TGGAGTTGGTCTAGAGGATG+TGG | - | tig0020816:49060-49079 | Msa1386430:CDS | 50.0% |
!! | TGTGGCTAGGTTTTTAGGGG+AGG | - | tig0020816:49090-49109 | Msa1386430:CDS | 50.0% |
ACAACCTACATCTCCGGCGT+TGG | - | tig0020816:47978-47997 | Msa1386430:three_prime_UTR | 55.0% | |
CAACCTACATCTCCGGCGTT+GGG | - | tig0020816:47979-47998 | Msa1386430:three_prime_UTR | 55.0% | |
CGTTGTTCCTCGGAGAGTGA+GGG | - | tig0020816:48022-48041 | Msa1386430:three_prime_UTR | 55.0% | |
ATAGACACCCTCACTCTCCG+AGG | + | tig0020816:48032-48051 | None:intergenic | 55.0% | |
!! | TCGGAGAGTGAGGGTGTCTA+TGG | - | tig0020816:48031-48050 | Msa1386430:three_prime_UTR | 55.0% |
!! | CGGAGAGTGAGGGTGTCTAT+GGG | - | tig0020816:48032-48051 | Msa1386430:three_prime_UTR | 55.0% |
!! | GGAGAGTGAGGGTGTCTATG+GGG | - | tig0020816:48033-48052 | Msa1386430:exon | 55.0% |
! | GGGGTCTGGTTTCCATGATG+AGG | - | tig0020816:48052-48071 | Msa1386430:CDS | 55.0% |
ACTGCACGTGACCCTCATCA+TGG | + | tig0020816:48067-48086 | None:intergenic | 55.0% | |
!! | GGGGTGAAAAAAGTACCGCG+AGG | + | tig0020816:48250-48269 | None:intergenic | 55.0% |
TGATGTTGCCACAAAGCCGG+TGG | - | tig0020816:48655-48674 | Msa1386430:CDS | 55.0% | |
ACAACCTACATCTCCGGCGT+TGG | - | tig0020816:47978-47997 | Msa1386430:three_prime_UTR | 55.0% | |
CAACCTACATCTCCGGCGTT+GGG | - | tig0020816:47979-47998 | Msa1386430:three_prime_UTR | 55.0% | |
CGTTGTTCCTCGGAGAGTGA+GGG | - | tig0020816:48022-48041 | Msa1386430:three_prime_UTR | 55.0% | |
ATAGACACCCTCACTCTCCG+AGG | + | tig0020816:48032-48051 | None:intergenic | 55.0% | |
!! | TCGGAGAGTGAGGGTGTCTA+TGG | - | tig0020816:48031-48050 | Msa1386430:three_prime_UTR | 55.0% |
!! | CGGAGAGTGAGGGTGTCTAT+GGG | - | tig0020816:48032-48051 | Msa1386430:three_prime_UTR | 55.0% |
!! | GGAGAGTGAGGGTGTCTATG+GGG | - | tig0020816:48033-48052 | Msa1386430:exon | 55.0% |
! | GGGGTCTGGTTTCCATGATG+AGG | - | tig0020816:48052-48071 | Msa1386430:CDS | 55.0% |
ACTGCACGTGACCCTCATCA+TGG | + | tig0020816:48067-48086 | None:intergenic | 55.0% | |
!! | GGGGTGAAAAAAGTACCGCG+AGG | + | tig0020816:48250-48269 | None:intergenic | 55.0% |
TGATGTTGCCACAAAGCCGG+TGG | - | tig0020816:48655-48674 | Msa1386430:CDS | 55.0% | |
TGTACGACGGAGAACGGTGC+CGG | + | tig0020816:47961-47980 | None:intergenic | 60.0% | |
AGTCCCAACGCCGGAGATGT+AGG | + | tig0020816:47985-48004 | None:intergenic | 60.0% | |
GGGACTCACACCCGTTCTCA+TGG | - | tig0020816:47999-48018 | Msa1386430:three_prime_UTR | 60.0% | |
GCGTTGTTCCTCGGAGAGTG+AGG | - | tig0020816:48021-48040 | Msa1386430:three_prime_UTR | 60.0% | |
!! | GTGAGGGTGTCTATGGGGTC+TGG | - | tig0020816:48038-48057 | Msa1386430:exon | 60.0% |
TGTACGACGGAGAACGGTGC+CGG | + | tig0020816:47961-47980 | None:intergenic | 60.0% | |
AGTCCCAACGCCGGAGATGT+AGG | + | tig0020816:47985-48004 | None:intergenic | 60.0% | |
GGGACTCACACCCGTTCTCA+TGG | - | tig0020816:47999-48018 | Msa1386430:three_prime_UTR | 60.0% | |
GCGTTGTTCCTCGGAGAGTG+AGG | - | tig0020816:48021-48040 | Msa1386430:three_prime_UTR | 60.0% | |
!! | GTGAGGGTGTCTATGGGGTC+TGG | - | tig0020816:48038-48057 | Msa1386430:exon | 60.0% |
ACGGGTGTGAGTCCCAACGC+CGG | + | tig0020816:47994-48013 | None:intergenic | 65.0% | |
ACGGGTGTGAGTCCCAACGC+CGG | + | tig0020816:47994-48013 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
tig0020816 | gene | 47840 | 49365 | 47840 | ID=Msa1386430;Name=Msa1386430 |
tig0020816 | mRNA | 47840 | 49365 | 47840 | ID=Msa1386430-mRNA-1;Parent=Msa1386430;Name=Msa1386430-mRNA-1;_AED=0.01;_eAED=0.01;_QI=108|1|1|1|1|1|2|212|330 |
tig0020816 | exon | 47840 | 48738 | 47840 | ID=Msa1386430-mRNA-1:exon:10152;Parent=Msa1386430-mRNA-1 |
tig0020816 | exon | 48952 | 49365 | 48952 | ID=Msa1386430-mRNA-1:exon:10151;Parent=Msa1386430-mRNA-1 |
tig0020816 | five_prime_UTR | 49258 | 49365 | 49258 | ID=Msa1386430-mRNA-1:five_prime_utr;Parent=Msa1386430-mRNA-1 |
tig0020816 | CDS | 48952 | 49257 | 48952 | ID=Msa1386430-mRNA-1:cds;Parent=Msa1386430-mRNA-1 |
tig0020816 | CDS | 48052 | 48738 | 48052 | ID=Msa1386430-mRNA-1:cds;Parent=Msa1386430-mRNA-1 |
tig0020816 | three_prime_UTR | 47840 | 48051 | 47840 | ID=Msa1386430-mRNA-1:three_prime_utr;Parent=Msa1386430-mRNA-1 |
Gene Sequence |
Protein sequence |