AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0878180

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0878180 MtrunA17_Chr6g0460721 88.757 338 29 2 348 685 1 329 0.0 604
Msa0878180 MtrunA17_Chr6g0460721 69.972 363 56 7 1 344 1 329 8.65e-166 478
Msa0878180 MtrunA17_Chr6g0460731 84.594 357 17 5 1 334 1 342 0.0 599
Msa0878180 MtrunA17_Chr6g0460731 74.487 341 73 2 348 674 1 341 2.97e-176 506
Msa0878180 MtrunA17_Chr7g0254161 49.435 354 137 10 15 351 12 340 2.62e-97 306
Msa0878180 MtrunA17_Chr7g0254161 48.844 346 139 9 357 684 8 333 1.65e-90 288
Msa0878180 MtrunA17_Chr7g0217581 52.113 142 56 2 395 536 191 320 3.29e-40 155
Msa0878180 MtrunA17_Chr7g0217581 63.208 106 39 0 56 161 191 296 3.33e-38 150
Msa0878180 MtrunA17_Chr4g0042481 38.800 250 111 8 9 226 4 243 5.77e-40 153
Msa0878180 MtrunA17_Chr4g0042481 58.559 111 45 1 395 504 81 191 3.75e-39 150
Msa0878180 MtrunA17_Chr3g0092111 37.729 273 130 10 395 666 105 338 4.94e-38 147
Msa0878180 MtrunA17_Chr3g0092111 36.328 256 109 9 50 264 98 340 4.91e-35 139
Msa0878180 MtrunA17_Chr6g0453321 57.759 116 45 2 394 508 96 208 2.46e-37 146
Msa0878180 MtrunA17_Chr6g0453321 58.407 113 43 2 55 166 96 205 4.87e-37 145
Msa0878180 MtrunA17_Chr8g0355261 34.940 249 116 8 41 272 67 286 1.08e-34 137
Msa0878180 MtrunA17_Chr8g0355261 39.409 203 93 5 357 530 11 212 4.98e-34 135
Msa0878180 MtrunA17_Chr5g0417571 53.509 114 44 2 55 162 99 209 1.18e-32 128
Msa0878180 MtrunA17_Chr5g0417571 51.351 111 45 2 394 498 99 206 3.42e-29 118
Msa0878180 MtrunA17_Chr5g0417601 52.294 109 49 1 54 162 100 205 3.69e-29 120
Msa0878180 MtrunA17_Chr5g0417601 50.476 105 49 1 393 497 100 201 8.68e-26 110
Msa0878180 MtrunA17_Chr2g0283811 77.419 62 14 0 89 150 39 100 5.15e-29 113
Msa0878180 MtrunA17_Chr2g0283811 74.194 62 16 0 428 489 39 100 7.38e-28 110
Msa0878180 MtrunA17_Chr5g0417551 57.143 98 37 2 53 150 88 180 4.33e-28 116
Msa0878180 MtrunA17_Chr5g0417551 53.061 98 41 2 392 489 88 180 5.41e-25 107
Msa0878180 MtrunA17_Chr5g0417561 57.778 90 32 2 61 150 89 172 1.51e-27 114
Msa0878180 MtrunA17_Chr5g0417561 52.041 98 42 2 392 489 80 172 2.55e-24 105
Msa0878180 MtrunA17_Chr8g0346551 63.492 63 23 0 431 493 19 81 1.43e-24 103
Msa0878180 MtrunA17_Chr8g0346551 60.317 63 25 0 92 154 19 81 9.32e-23 98.6
Msa0878180 MtrunA17_Chr8g0374251 42.727 110 60 1 436 542 68 177 3.65e-24 104
Msa0878180 MtrunA17_Chr8g0374251 38.931 131 74 2 97 221 68 198 5.48e-23 100
Msa0878180 MtrunA17_Chr3g0127201 59.155 71 29 0 420 490 11 81 4.77e-24 102
Msa0878180 MtrunA17_Chr3g0127201 54.930 71 32 0 81 151 11 81 3.79e-22 97.4
Msa0878180 MtrunA17_Chr4g0047001 49.474 95 37 2 408 491 16 110 7.06e-24 104
Msa0878180 MtrunA17_Chr4g0047001 44.762 105 48 2 56 152 8 110 1.70e-22 100
Msa0878180 MtrunA17_Chr8g0367161 57.534 73 25 1 419 491 21 87 1.01e-23 103
Msa0878180 MtrunA17_Chr8g0367161 47.872 94 36 2 59 152 7 87 3.36e-23 101
Msa0878180 MtrunA17_Chr2g0326001 55.844 77 33 1 415 490 18 94 1.78e-23 101
Msa0878180 MtrunA17_Chr2g0326001 55.263 76 33 1 76 150 18 93 4.27e-22 97.4
Msa0878180 MtrunA17_Chr4g0010151 62.903 62 23 0 429 490 75 136 1.99e-23 102
Msa0878180 MtrunA17_Chr4g0010151 60.656 61 24 0 90 150 75 135 1.79e-22 99.8
Msa0878180 MtrunA17_Chr4g0030051 57.895 76 31 1 414 488 18 93 3.44e-23 100
Msa0878180 MtrunA17_Chr4g0030051 56.579 76 32 1 75 149 18 93 3.65e-22 97.4
Msa0878180 MtrunA17_Chr2g0308011 75.510 49 12 0 436 484 37 85 5.45e-23 97.8
Msa0878180 MtrunA17_Chr2g0308011 69.388 49 15 0 97 145 37 85 8.76e-21 91.3
Msa0878180 MtrunA17_Chr8g0374111 58.904 73 29 1 436 508 29 100 8.56e-23 97.8
Msa0878180 MtrunA17_Chr8g0374111 46.809 94 47 2 97 190 29 119 2.47e-21 93.6
Msa0878180 MtrunA17_Chr2g0328021 47.423 97 51 0 423 519 49 145 8.69e-23 99.4
Msa0878180 MtrunA17_Chr2g0328021 56.716 67 29 0 84 150 49 115 9.93e-22 96.3
Msa0878180 MtrunA17_Chr4g0031411 63.492 63 22 1 429 490 68 130 1.52e-22 99.4
Msa0878180 MtrunA17_Chr4g0031411 61.667 60 23 0 90 149 68 127 1.37e-21 96.7
Msa0878180 MtrunA17_Chr2g0282051 70.690 58 16 1 434 491 44 100 2.76e-22 97.4
Msa0878180 MtrunA17_Chr2g0282051 67.241 58 18 1 95 152 44 100 8.14e-21 93.2
Msa0878180 MtrunA17_Chr1g0188851 50.000 80 35 1 414 488 16 95 3.97e-22 97.4
Msa0878180 MtrunA17_Chr1g0188851 47.500 80 37 1 75 149 16 95 1.58e-20 92.8
Msa0878180 MtrunA17_Chr4g0047761 52.747 91 27 2 416 491 37 126 5.24e-22 97.4
Msa0878180 MtrunA17_Chr4g0047761 50.549 91 29 2 77 152 37 126 1.59e-20 93.2
Msa0878180 MtrunA17_Chr2g0282441 59.375 64 26 0 424 487 13 76 7.10e-22 97.4
Msa0878180 MtrunA17_Chr2g0282441 54.688 64 29 0 85 148 13 76 1.76e-20 93.2
Msa0878180 MtrunA17_Chr4g0061761 67.925 53 17 0 434 486 38 90 9.90e-22 96.7
Msa0878180 MtrunA17_Chr4g0061761 64.151 53 19 0 95 147 38 90 3.20e-20 92.4
Msa0878180 MtrunA17_Chr7g0237921 55.556 72 30 1 421 490 59 130 1.16e-21 97.1
Msa0878180 MtrunA17_Chr7g0237921 53.521 71 31 1 82 150 59 129 2.06e-20 93.6
Msa0878180 MtrunA17_Chr8g0341671 69.231 52 16 0 436 487 20 71 1.36e-21 94.0
Msa0878180 MtrunA17_Chr8g0341671 65.385 52 18 0 97 148 20 71 1.56e-20 90.9
Msa0878180 MtrunA17_Chr7g0223311 70.909 55 15 1 437 490 78 132 8.18e-21 95.1
Msa0878180 MtrunA17_Chr7g0223311 67.308 52 17 0 98 149 78 129 5.20e-20 92.4
Msa0878180 MtrunA17_Chr5g0411951 63.636 55 20 0 432 486 39 93 1.10e-20 94.0
Msa0878180 MtrunA17_Chr5g0411951 60.000 55 22 0 93 147 39 93 2.02e-19 90.1
Msa0878180 MtrunA17_Chr3g0126201 56.164 73 30 1 420 490 33 105 1.20e-20 94.0
Msa0878180 MtrunA17_Chr3g0126201 54.167 72 31 1 81 150 33 104 1.73e-19 90.5
Msa0878180 MtrunA17_Chr2g0282511 71.429 49 14 0 436 484 45 93 1.79e-20 92.8
Msa0878180 MtrunA17_Chr2g0282511 67.347 49 16 0 97 145 45 93 3.63e-19 89.0
Msa0878180 MtrunA17_Chr1g0177251 66.038 53 18 0 438 490 14 66 5.48e-20 90.9
Msa0878180 MtrunA17_Chr1g0177251 65.385 52 18 0 99 150 14 65 6.97e-19 87.8
Msa0878180 MtrunA17_Chr3g0117601 58.065 62 25 1 426 486 50 111 8.70e-20 91.3
Msa0878180 MtrunA17_Chr3g0117601 56.452 62 26 1 87 147 50 111 7.60e-19 88.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0878180 AT3G47500.1 56.667 120 46 3 53 172 71 184 3.29e-37 145
Msa0878180 AT3G47500.1 47.368 152 62 3 392 543 71 204 6.26e-36 141
Msa0878180 AT5G39660.3 57.391 115 36 2 402 503 92 206 3.34e-35 139
Msa0878180 AT5G39660.3 56.140 114 37 2 63 163 92 205 8.45e-34 135
Msa0878180 AT5G39660.1 57.391 115 36 2 402 503 92 206 3.34e-35 139
Msa0878180 AT5G39660.1 56.140 114 37 2 63 163 92 205 8.45e-34 135
Msa0878180 AT5G39660.2 57.391 115 36 2 402 503 92 206 3.34e-35 139
Msa0878180 AT5G39660.2 56.140 114 37 2 63 163 92 205 8.45e-34 135
Msa0878180 AT5G62430.1 52.137 117 49 2 64 178 26 137 2.64e-33 130
Msa0878180 AT5G62430.1 63.043 92 29 2 415 501 30 121 2.01e-32 127
Msa0878180 AT1G26790.1 46.988 166 65 5 356 498 10 175 6.80e-33 130
Msa0878180 AT1G26790.1 55.963 109 44 2 55 159 67 175 4.42e-32 128
Msa0878180 AT2G34140.1 43.046 151 64 3 71 199 19 169 2.44e-32 123
Msa0878180 AT2G34140.1 46.512 129 43 2 361 489 9 111 4.52e-31 119
Msa0878180 AT1G69570.1 49.593 123 41 2 424 545 120 222 1.04e-30 125
Msa0878180 AT1G69570.1 62.500 80 30 0 85 164 120 199 2.21e-29 121
Msa0878180 AT1G29160.1 78.333 60 13 0 91 150 56 115 1.03e-29 116
Msa0878180 AT1G29160.1 76.667 60 14 0 430 489 56 115 3.42e-29 114
Msa0878180 AT3G55370.1 57.143 70 30 0 432 501 72 141 7.46e-24 103
Msa0878180 AT3G55370.1 57.143 70 30 0 93 162 72 141 2.12e-23 102
Msa0878180 AT3G55370.2 57.143 70 30 0 432 501 72 141 1.02e-23 103
Msa0878180 AT3G55370.2 57.143 70 30 0 93 162 72 141 2.88e-23 102
Msa0878180 AT3G55370.3 57.143 70 30 0 432 501 117 186 1.72e-23 103
Msa0878180 AT3G55370.3 57.143 70 30 0 93 162 117 186 5.20e-23 102
Msa0878180 AT2G28810.2 41.414 99 55 1 392 487 30 128 5.61e-23 100
Msa0878180 AT2G28810.2 40.000 100 57 1 52 148 29 128 5.42e-22 98.2
Msa0878180 AT1G51700.1 55.714 70 29 1 418 487 17 84 7.00e-23 97.4
Msa0878180 AT1G51700.1 52.857 70 31 1 79 148 17 84 2.78e-21 92.8
Msa0878180 AT3G21270.1 71.698 53 15 0 436 488 29 81 7.46e-23 97.4
Msa0878180 AT3G21270.1 69.811 53 16 0 97 149 29 81 7.69e-22 94.7
Msa0878180 AT5G60200.1 59.375 64 26 0 430 493 49 112 7.59e-23 99.0
Msa0878180 AT5G60200.1 61.667 60 23 0 91 150 49 108 6.32e-22 96.3
Msa0878180 AT2G28810.1 41.414 99 55 1 392 487 47 145 7.86e-23 100
Msa0878180 AT2G28810.1 40.000 100 57 1 52 148 46 145 6.59e-22 98.2
Msa0878180 AT5G60850.1 70.909 55 16 0 436 490 51 105 1.12e-22 99.8
Msa0878180 AT5G60850.1 66.667 54 18 0 97 150 51 104 1.69e-20 93.2
Msa0878180 AT4G24060.1 60.938 64 25 0 427 490 44 107 1.81e-22 99.8
Msa0878180 AT4G24060.1 58.730 63 26 0 88 150 44 106 1.23e-20 94.4
Msa0878180 AT3G61850.2 63.333 60 22 0 431 490 57 116 2.04e-22 98.6
Msa0878180 AT3G61850.2 61.017 59 23 0 92 150 57 115 1.14e-20 93.2
Msa0878180 AT3G61850.3 63.333 60 22 0 431 490 57 116 2.04e-22 98.6
Msa0878180 AT3G61850.3 61.017 59 23 0 92 150 57 115 1.14e-20 93.2
Msa0878180 AT2G37590.1 62.712 59 22 0 432 490 85 143 2.44e-22 99.4
Msa0878180 AT2G37590.1 62.069 58 22 0 93 150 85 142 1.52e-21 96.7
Msa0878180 AT3G61850.1 63.333 60 22 0 431 490 69 128 2.59e-22 98.6
Msa0878180 AT3G61850.1 61.017 59 23 0 92 150 69 127 1.39e-20 93.2
Msa0878180 AT1G28310.1 67.857 56 18 0 436 491 27 82 2.78e-22 98.6
Msa0878180 AT1G28310.1 64.286 56 20 0 97 152 27 82 1.03e-20 94.0
Msa0878180 AT3G61850.5 63.333 60 22 0 431 490 57 116 3.72e-22 98.2
Msa0878180 AT3G61850.5 61.017 59 23 0 92 150 57 115 1.92e-20 93.2
Msa0878180 AT1G28310.2 67.857 56 18 0 436 491 51 106 3.83e-22 98.6
Msa0878180 AT1G28310.2 64.286 56 20 0 97 152 51 106 1.24e-20 94.4
Msa0878180 AT3G61850.4 63.333 60 22 0 431 490 69 128 4.52e-22 98.2
Msa0878180 AT3G61850.4 61.017 59 23 0 92 150 69 127 2.29e-20 93.2
Msa0878180 AT3G45610.1 58.065 62 26 0 432 493 36 97 4.57e-22 96.3
Msa0878180 AT3G45610.1 45.055 91 42 2 93 175 36 126 1.92e-21 94.7
Msa0878180 AT5G65590.1 69.091 55 17 0 436 490 41 95 6.59e-22 97.8
Msa0878180 AT5G65590.1 64.815 54 19 0 97 150 41 94 5.06e-20 92.0
Msa0878180 AT3G50410.1 67.273 55 18 0 436 490 30 84 1.06e-21 95.5
Msa0878180 AT3G50410.1 66.038 53 18 0 97 149 30 82 1.62e-20 92.0
Msa0878180 AT1G07640.1 67.857 56 17 1 436 490 21 76 1.27e-21 95.9
Msa0878180 AT1G07640.1 66.038 53 18 0 97 149 21 73 1.80e-20 92.4
Msa0878180 AT1G07640.2 67.857 56 17 1 436 490 77 132 2.18e-21 96.3
Msa0878180 AT1G07640.2 67.273 55 17 1 97 150 77 131 2.94e-20 93.2
Msa0878180 AT4G00940.1 54.167 72 29 1 424 491 52 123 2.22e-21 95.5
Msa0878180 AT4G00940.1 52.778 72 30 1 85 152 52 123 1.36e-19 90.5
Msa0878180 AT4G00940.3 54.167 72 29 1 424 491 52 123 2.22e-21 95.5
Msa0878180 AT4G00940.3 52.778 72 30 1 85 152 52 123 1.36e-19 90.5
Msa0878180 AT4G00940.2 54.167 72 29 1 424 491 52 123 2.22e-21 95.5
Msa0878180 AT4G00940.2 52.778 72 30 1 85 152 52 123 1.36e-19 90.5
Msa0878180 AT1G07640.3 67.857 56 17 1 436 490 85 140 2.91e-21 96.3
Msa0878180 AT1G07640.3 67.273 55 17 1 97 150 85 139 3.71e-20 92.8
Msa0878180 AT4G38000.1 48.352 91 37 2 435 524 40 121 3.10e-21 94.0
Msa0878180 AT4G38000.1 49.367 79 38 2 96 172 40 118 7.23e-19 87.0
Msa0878180 AT5G02460.1 59.677 62 25 0 429 490 88 149 3.62e-21 97.1
Msa0878180 AT5G02460.1 59.016 61 25 0 90 150 88 148 3.50e-20 94.0
Msa0878180 AT2G28510.1 67.857 56 18 0 438 493 50 105 5.42e-21 94.4
Msa0878180 AT2G28510.1 66.071 56 19 0 99 154 50 105 2.59e-20 92.4
Msa0878180 AT1G64620.1 58.333 60 25 0 425 484 38 97 6.08e-21 95.5
Msa0878180 AT1G64620.1 53.333 60 28 0 86 145 38 97 1.70e-18 88.2
Msa0878180 AT5G66940.1 43.636 110 50 3 423 532 26 123 7.74e-21 92.4
Msa0878180 AT5G66940.1 53.425 73 27 1 84 156 26 91 3.12e-20 90.5
Msa0878180 AT4G21050.1 50.000 78 37 1 416 491 2 79 1.98e-20 90.9
Msa0878180 AT4G21050.1 47.436 78 39 1 77 152 2 79 5.47e-19 86.7
Msa0878180 AT3G52440.1 64.151 53 19 0 438 490 27 79 7.49e-20 90.1
Msa0878180 AT3G52440.1 63.462 52 19 0 99 150 27 78 1.24e-18 86.3
Msa0878180 AT3G52440.2 64.151 53 19 0 438 490 46 98 9.54e-20 90.1
Msa0878180 AT3G52440.2 63.462 52 19 0 99 150 46 97 1.68e-18 86.7
Msa0878180 AT2G46590.1 62.264 53 20 0 431 483 63 115 1.65e-19 91.3
Msa0878180 AT2G46590.1 58.491 53 22 0 92 144 63 115 8.60e-18 86.3
Msa0878180 AT1G47655.1 65.306 49 17 0 436 484 29 77 1.75e-19 87.8
Msa0878180 AT1G47655.1 65.306 49 17 0 97 145 29 77 1.53e-18 85.1
Msa0878180 AT1G21340.1 68.000 50 16 0 438 487 40 89 2.00e-19 89.0
Msa0878180 AT1G21340.1 42.553 94 53 1 99 191 40 133 3.11e-19 88.6
Msa0878180 AT2G46590.2 62.264 53 20 0 431 483 75 127 2.10e-19 91.3
Msa0878180 AT2G46590.2 58.491 53 22 0 92 144 75 127 1.07e-17 85.9
Msa0878180 AT5G62940.1 57.812 64 26 1 424 486 60 123 3.03e-19 90.5
Msa0878180 AT5G62940.1 39.450 109 50 2 55 147 15 123 4.45e-19 90.1
Msa0878180 AT4G21040.1 56.140 57 25 0 438 494 27 83 5.71e-16 78.2
Msa0878180 AT4G21040.1 48.611 72 37 0 99 170 27 98 3.29e-15 76.3
Msa0878180 AT4G21080.1 54.386 57 26 0 438 494 27 83 1.60e-15 77.4
Msa0878180 AT4G21080.1 50.877 57 28 0 99 155 27 83 5.14e-14 72.8

Find 138 sgRNAs with CRISPR-Local

Find 554 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAATCTTGTCTGGTTTCTTT+AGG 0.212759 6_1:+18793792 None:intergenic
AACGGTATTGTCCTAAAATT+TGG 0.229755 6_1:-18786304 Msa0878180:CDS
TAGAAACCAACGACTCTTCT+AGG 0.239536 6_1:-18793547 Msa0878180:CDS
AATTTGTTCCTGAATCATTT+AGG 0.243494 6_1:-18785916 Msa0878180:CDS
GGTAACAATTGTAGAGAAAA+TGG 0.247425 6_1:-18793368 Msa0878180:CDS
TTGGAACAATGTTACTTCTA+TGG 0.251370 6_1:-18793204 Msa0878180:intron
ATATTTCTCTTGCAGTTTCT+AGG 0.261830 6_1:+18786235 None:intergenic
TTCTGATTGAAATTTGTCTA+TGG 0.271872 6_1:+18785664 None:intergenic
GGTGAGTTCTTCTCAGATTC+AGG 0.283209 6_1:-18794926 Msa0878180:CDS
TCTTCTAGTTTCATGCTCTT+TGG 0.299226 6_1:-18794961 Msa0878180:CDS
GTCGGAAGTGTCATAGATAT+TGG 0.311203 6_1:-18786501 Msa0878180:CDS
TTTAGGTGTTCAAATGATAA+TGG 0.318424 6_1:-18793488 Msa0878180:intron
GTCGGAGTTGTCACAGATAT+TGG 0.320960 6_1:-18793688 Msa0878180:CDS
ACCTCGAATCGTTAGATTCA+TGG 0.324349 6_1:+18786263 None:intergenic
GATCCATTCCTAAATGATTC+AGG 0.331263 6_1:+18785908 None:intergenic
TTGTTCCAACTTTGATTCAT+TGG 0.340788 6_1:+18793218 None:intergenic
ATTTACCATGGTTGTAGAAT+TGG 0.341653 6_1:+18794903 None:intergenic
AAGCACTGTGGAAGATAATA+TGG 0.348391 6_1:-18786656 Msa0878180:CDS
AAGCACTGTGGAAGATAATA+TGG 0.348391 6_1:-18793843 Msa0878180:CDS
TTGTTCAAGCTTTGATTCAA+TGG 0.349711 6_1:+18786052 None:intergenic
CCTTTGTATGGTAGTGGAAA+TGG 0.370217 6_1:-18793035 Msa0878180:CDS
GCTAACAAATGTAGAGGAAA+TGG 0.377738 6_1:-18786202 Msa0878180:CDS
ATGCAAATGTGTAACCCTTA+TGG 0.378243 6_1:-18786004 Msa0878180:CDS
ATGCAGATGTGTAACCCTTA+TGG 0.380909 6_1:-18793170 Msa0878180:intron
AGAGTCGTTGGTTTCTAAAC+TGG 0.381811 6_1:+18793553 None:intergenic
AGGAATGGATCAGTTTCAAT+AGG 0.385406 6_1:-18785896 Msa0878180:CDS
CCTGAAAACTGCAGCAGATT+CGG 0.385532 6_1:+18786339 None:intergenic
GCTCTTTGGAAAGAAGATTC+AGG 0.390549 6_1:-18787862 Msa0878180:CDS
TAGCCGAATCTGAACATAAT+AGG 0.394096 6_1:-18786117 Msa0878180:CDS
GGACATTGAACAATCTTGTC+TGG 0.411323 6_1:+18793782 None:intergenic
ACAAATTGCAAGCCAATGTT+TGG 0.418330 6_1:+18793083 None:intergenic
GCTCTTTGGTAAGAAGATTC+CGG 0.421687 6_1:-18794947 Msa0878180:CDS
TGACCTATTATGTTCAGATT+CGG 0.422672 6_1:+18786114 None:intergenic
TGCAGTAACTCAAAGCATAA+AGG 0.422749 6_1:-18793944 Msa0878180:CDS
TCCATGAATCTAACGATTCG+AGG 0.432538 6_1:-18786264 Msa0878180:CDS
GTCTGAAGATGTTCGGCATA+TGG 0.438201 6_1:+18785954 None:intergenic
GAACTAGGATCAACGCCATA+AGG 0.439532 6_1:+18785989 None:intergenic
AGAAACGTTCCTTTCGGTGC+AGG 0.439748 6_1:-18786460 Msa0878180:CDS
GTGTCACGCGCCGAGGGTTG+AGG 0.440646 6_1:-18793123 Msa0878180:CDS
AGGTTTAGACCTATTCTGTT+CGG 0.445629 6_1:+18793274 None:intergenic
AGAGCTACCCTGCACCTTCA+TGG 0.447832 6_1:-18793247 Msa0878180:CDS
ACTAGTAATAGTTGTATCTC+AGG 0.449615 6_1:-18792963 Msa0878180:intron
CTTGAACAATGTTCCTTCCA+TGG 0.451475 6_1:-18786038 Msa0878180:CDS
CGCCACATGATTGTAGCTTC+CGG 0.453024 6_1:-18786403 Msa0878180:CDS
TTGCATCAACATTTCTCTTG+TGG 0.456190 6_1:+18793393 None:intergenic
AATTTGTTCCTGCATCAAAC+AGG 0.461385 6_1:-18793067 Msa0878180:CDS
TTCGATCAAGACAGAATCTC+TGG 0.463194 6_1:+18785784 None:intergenic
AGAGCTACCCTGCATCTTCA+TGG 0.465844 6_1:-18786081 Msa0878180:CDS
AGAAATGTTGCTGTCGGTGC+AGG 0.467099 6_1:-18793647 Msa0878180:CDS
GTTCCATTCCTGTTTGATGC+AGG 0.467432 6_1:+18793059 None:intergenic
GGACATTGAACAATCTTGTC+CGG 0.468204 6_1:+18786595 None:intergenic
TTCATTGGAATTATCCATGA+AGG 0.472286 6_1:+18793233 None:intergenic
TTGATCGAAGACACTAATCT+TGG 0.475063 6_1:-18785770 Msa0878180:three_prime_UTR
TTCCTTTCGGTGCAGGGAGA+CGG 0.475764 6_1:-18786453 Msa0878180:CDS
ACTTACCATGGTTGAAGAGT+TGG 0.478391 6_1:+18787839 None:intergenic
TCATAGTTGTTGCTCCGGTA+TGG 0.482344 6_1:-18785830 Msa0878180:three_prime_UTR
AATGCAGCCATTTGAACCTA+TGG 0.483789 6_1:+18793004 None:intergenic
ATGTTCGGTCTGAAGATGTT+CGG 0.485708 6_1:+18785947 None:intergenic
TATTCGAATCCGAACAGAAT+AGG 0.487381 6_1:-18793283 Msa0878180:CDS
GGCGTTGCTTTCAAAATTTG+AGG 0.487467 6_1:+18786369 None:intergenic
GAAGTAGGATCAATGCCATA+AGG 0.489322 6_1:+18793155 None:intergenic
TTCAGGTGCTCAAATAATAA+CGG 0.489366 6_1:-18786322 Msa0878180:CDS
TATAGAAAGAGAAAAGTGTT+TGG 0.490803 6_1:+18795115 None:intergenic
GGAATTATCCATGAAGGTGC+AGG 0.491213 6_1:+18793239 None:intergenic
GGAACACCTTTGTATGGTAG+TGG 0.497692 6_1:-18793041 Msa0878180:CDS
TATTGTCCTAAAATTTGGTC+CGG 0.499333 6_1:-18786299 Msa0878180:CDS
TTGCTGTCGGTGCAGGGAGA+CGG 0.499466 6_1:-18793640 Msa0878180:CDS
TAATTCCAATGAATCAAAGT+TGG 0.500347 6_1:-18793223 Msa0878180:CDS
GGAATCATCCATGAAGATGC+AGG 0.501713 6_1:+18786073 None:intergenic
AACGTTTCTCATTGTTCCAC+CGG 0.503306 6_1:+18786474 None:intergenic
ACAATGAGAAACGTTCCTTT+CGG 0.504607 6_1:-18786466 Msa0878180:CDS
TTGCATATGCTCCATTGAAA+AGG 0.504841 6_1:+18785709 None:intergenic
ATTTCTCATTGTTCCACCGT+TGG 0.510921 6_1:+18793664 None:intergenic
GCAGTGGTGTCACGCGCCGA+GGG 0.511659 6_1:-18793129 Msa0878180:CDS
ACAAATTGCAAGCCAATGTT+CGG 0.513658 6_1:+18785932 None:intergenic
GTTCCTGAATCATTTAGGAA+TGG 0.513930 6_1:-18785911 Msa0878180:CDS
CAAGGATCGGTGATCCATAC+CGG 0.519624 6_1:+18785816 None:intergenic
TGGCACCACTGCATTGAACT+AGG 0.522209 6_1:+18785974 None:intergenic
TGTGTATCTTCTGTGACAAA+TGG 0.528423 6_1:-18786160 Msa0878180:CDS
GTGTTGAAACTGTTGCATCT+TGG 0.528822 6_1:+18786574 None:intergenic
GAAACGTTCCTTTCGGTGCA+GGG 0.532355 6_1:-18786459 Msa0878180:CDS
AGGAATGGAACACCTTTGTA+TGG 0.533609 6_1:-18793047 Msa0878180:CDS
TGCAGCAGATTCGGCAGAAG+AGG 0.533984 6_1:+18786348 None:intergenic
TTGGTACCTAGAAGAGTCGT+TGG 0.535519 6_1:+18793541 None:intergenic
TGTCATAGATATTGGACTGC+CGG 0.542196 6_1:-18786493 Msa0878180:CDS
ATTCAACATTTGAGCCATGT+TGG 0.548791 6_1:+18793522 None:intergenic
GTTCCTGCATCAAACAGGAA+TGG 0.554691 6_1:-18793062 Msa0878180:CDS
TTCCGTCTCCCTGCACCGAA+AGG 0.555844 6_1:+18786451 None:intergenic
TGTGTATCGTCTGTGACAAA+CGG 0.557160 6_1:-18793326 Msa0878180:CDS
GCTAGTCATAGTTGTTGCTC+CGG 0.559422 6_1:-18785835 Msa0878180:exon
AAGTAGGATCAATGCCATAA+GGG 0.561604 6_1:+18793156 None:intergenic
ATTGAAGATTGAACCATGGA+AGG 0.561855 6_1:+18786025 None:intergenic
AAGAGAAATGTTGATGCAAG+AGG 0.561973 6_1:-18793389 Msa0878180:CDS
AATGTGTCCATAGGTTCAAA+TGG 0.563336 6_1:-18793011 Msa0878180:CDS
AACTAGGATCAACGCCATAA+GGG 0.563985 6_1:+18785990 None:intergenic
ATTTGAGGTTGAAATTCCAC+CGG 0.565984 6_1:+18786384 None:intergenic
GGAAATGGAAATGTGTCCAT+AGG 0.578755 6_1:-18793020 Msa0878180:CDS
AACATCTTCAGACCGAACAT+TGG 0.582195 6_1:-18785944 Msa0878180:CDS
TTGGTTTCTAAACTGGCGGT+CGG 0.586129 6_1:+18793560 None:intergenic
TGACACCACTGCATTGAAGT+AGG 0.587068 6_1:+18793140 None:intergenic
ATCAACCTCGGCATTTCTGT+CGG 0.588083 6_1:-18793706 Msa0878180:CDS
TAGCTAGTAGTAGATGAAGA+AGG 0.592040 6_1:+18785854 None:intergenic
TCAGGCCAATTCTACAACCA+TGG 0.595350 6_1:-18794908 Msa0878180:intron
GGTGCAGGGTAGCTCTGCAT+AGG 0.600830 6_1:+18793254 None:intergenic
CACATGATTGTAGTGTCCGA+TGG 0.602575 6_1:-18793587 Msa0878180:CDS
GCAAGTGCTAACAAATGTAG+AGG 0.606351 6_1:-18786208 Msa0878180:CDS
GTCGTTGGTTTCTAAACTGG+CGG 0.606694 6_1:+18793556 None:intergenic
ATGTTTGTAACCTCAACCCT+CGG 0.610211 6_1:+18793113 None:intergenic
CCATTTCCACTACCATACAA+AGG 0.611279 6_1:+18793035 None:intergenic
CTCAAATGTTGAATCTGCTG+CGG 0.611992 6_1:-18793513 Msa0878180:CDS
TTACTAGTAGTAGATGAAGA+AGG 0.612171 6_1:+18792978 None:intergenic
TCAGGCCAACTCTTCAACCA+TGG 0.613442 6_1:-18787844 Msa0878180:intron
GTGACAAATGGTTATACTCG+AGG 0.618192 6_1:-18786148 Msa0878180:CDS
CATAGATATTGGACTGCCGG+TGG 0.627706 6_1:-18786490 Msa0878180:CDS
CACAGATATTGGACCAACGG+TGG 0.629754 6_1:-18793677 Msa0878180:CDS
TGAATCTGAGAAGAACTCAC+CGG 0.630634 6_1:+18794928 None:intergenic
GAATTATCCATGAAGGTGCA+GGG 0.632904 6_1:+18793240 None:intergenic
GAATCATCCATGAAGATGCA+GGG 0.636010 6_1:+18786074 None:intergenic
TGTCACAGATATTGGACCAA+CGG 0.638912 6_1:-18793680 Msa0878180:CDS
TTGATCCTAGTTCAATGCAG+TGG 0.644085 6_1:-18785979 Msa0878180:CDS
TTGCATTGAAGATTGAACCA+TGG 0.644235 6_1:+18786021 None:intergenic
CACATGATTGTAGCTTCCGG+TGG 0.649268 6_1:-18786400 Msa0878180:CDS
ACTGGCGGTCGGAATTCCAT+CGG 0.649455 6_1:+18793571 None:intergenic
TTGATCCTACTTCAATGCAG+TGG 0.649462 6_1:-18793145 Msa0878180:CDS
TGCAGTAACTCAAAGCACAA+AGG 0.653363 6_1:-18786757 Msa0878180:CDS
ACTACAATGTCAGTCAACCT+CGG 0.657312 6_1:-18786531 Msa0878180:CDS
CACCGGAAGCTACAATCATG+TGG 0.658948 6_1:+18786401 None:intergenic
GAGTACAAGAAATTTCAAGA+TGG 0.659871 6_1:+18785734 None:intergenic
GTGACAAACGGTCATACTCG+AGG 0.662893 6_1:-18793314 Msa0878180:CDS
GAAATGTTGCTGTCGGTGCA+GGG 0.663844 6_1:-18793646 Msa0878180:CDS
CAACTCCGACAGAAATGCCG+AGG 0.680790 6_1:+18793701 None:intergenic
ACTACAACGTCAATCAACCT+CGG 0.682406 6_1:-18793718 Msa0878180:CDS
GACTCTTCTAGGTACCAACA+TGG 0.687547 6_1:-18793536 Msa0878180:CDS
ACAATGAGAAATGTTGCTGT+CGG 0.691886 6_1:-18793653 Msa0878180:CDS
CATCGGACACTACAATCATG+TGG 0.695881 6_1:+18793588 None:intergenic
CAATTGTAGAGAAAATGGAG+AGG 0.705347 6_1:-18793363 Msa0878180:CDS
AAAAGTGAACACAAGCACTG+TGG 0.727270 6_1:-18793855 Msa0878180:CDS
AAAAGTTTACACAAGCACTG+TGG 0.736976 6_1:-18786668 Msa0878180:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTTATTTTTGTTGTAT+TGG - chr6_1:18786049-18786068 Msa0878180:CDS 10.0%
!!! TTTTTTATTTTTGTTGTATT+GGG - chr6_1:18786050-18786069 Msa0878180:CDS 10.0%
!! TAAAGTAATTTCTTATATTT+GGG + chr6_1:18789577-18789596 None:intergenic 10.0%
!! ATAAAGTAATTTCTTATATT+TGG + chr6_1:18789578-18789597 None:intergenic 10.0%
!! AAAAAAAATTACATTATGAA+AGG - chr6_1:18790006-18790025 Msa0878180:intron 10.0%
!!! ATAAAGATCTATTTTAATTT+TGG - chr6_1:18790059-18790078 Msa0878180:intron 10.0%
!!! TAAAGATCTATTTTAATTTT+GGG - chr6_1:18790060-18790079 Msa0878180:intron 10.0%
!! TAAGAAAAATGTATAAATAA+AGG - chr6_1:18791677-18791696 Msa0878180:intron 10.0%
!! AAGAAAAATGTATAAATAAA+GGG - chr6_1:18791678-18791697 Msa0878180:intron 10.0%
!! TATAATAAAATTAAAGTGAT+TGG - chr6_1:18791861-18791880 Msa0878180:intron 10.0%
!!! TAAAAAAAAGCATTAATTAA+AGG - chr6_1:18792478-18792497 Msa0878180:intron 10.0%
!! AATTTAATAAATTGAGATTA+AGG - chr6_1:18793299-18793318 Msa0878180:CDS 10.0%
!! TAAAAAAACAACATAAACAA+TGG + chr6_1:18786012-18786031 None:intergenic 15.0%
!! AATTTAAATGTTTCAAAGAT+TGG + chr6_1:18786091-18786110 None:intergenic 15.0%
!! ATAAAAAAAACTCAAGAATA+TGG - chr6_1:18786154-18786173 Msa0878180:CDS 15.0%
!!! TAAATTTGTTTAATTTTGCT+TGG - chr6_1:18786445-18786464 Msa0878180:CDS 15.0%
!! TTTCATAAATATAACATGAT+TGG - chr6_1:18786525-18786544 Msa0878180:CDS 15.0%
!!! CATATAACATTATTTGAAAT+CGG - chr6_1:18788204-18788223 Msa0878180:intron 15.0%
!! TAAAAAAAATTATTCAATGC+AGG - chr6_1:18789770-18789789 Msa0878180:intron 15.0%
!! AAAAAAAATTATTCAATGCA+GGG - chr6_1:18789771-18789790 Msa0878180:intron 15.0%
!!! AATGTAATTTTTTTTGTTGT+CGG + chr6_1:18790001-18790020 None:intergenic 15.0%
!!! TTTTTAAATTAGAAATTGCA+TGG + chr6_1:18790180-18790199 None:intergenic 15.0%
!! CAATGAAAAATTAAATGAAA+AGG + chr6_1:18790249-18790268 None:intergenic 15.0%
!!! TTTCATTTAATTTTTCATTG+TGG - chr6_1:18790249-18790268 Msa0878180:intron 15.0%
!! CATTGAATAAGTAATATATT+CGG - chr6_1:18790954-18790973 Msa0878180:intron 15.0%
!! AAATGTGAAAAAAAACAAAA+GGG + chr6_1:18791155-18791174 None:intergenic 15.0%
!! ACAAATTAGTAGTATTAATT+AGG - chr6_1:18791281-18791300 Msa0878180:intron 15.0%
!! CAAATTAGTAGTATTAATTA+GGG - chr6_1:18791282-18791301 Msa0878180:intron 15.0%
!! AAATTAGTAGTATTAATTAG+GGG - chr6_1:18791283-18791302 Msa0878180:intron 15.0%
!! AGAAAAATGTATAAATAAAG+GGG - chr6_1:18791679-18791698 Msa0878180:intron 15.0%
!! ACTTATTTAAATTGACATAA+AGG - chr6_1:18792075-18792094 Msa0878180:intron 15.0%
!!! TTTTTTTTTCATTTTAGAGA+TGG + chr6_1:18792146-18792165 None:intergenic 15.0%
!!! TTAATTTTCAAAGTCTTTTT+TGG - chr6_1:18792558-18792577 Msa0878180:intron 15.0%
!! TTCTAAATTAACATGAAAAA+TGG + chr6_1:18793074-18793093 None:intergenic 15.0%
!!! TAATACTCTTCAAATTTTAA+AGG + chr6_1:18793153-18793172 None:intergenic 15.0%
!! GAAAATATAGACAATATATT+TGG - chr6_1:18793358-18793377 Msa0878180:CDS 15.0%
!!! AGAATTAAGAAATTTTTAAG+AGG + chr6_1:18793585-18793604 None:intergenic 15.0%
!! ACTATAAAATAAATTCCTTA+TGG + chr6_1:18793919-18793938 None:intergenic 15.0%
!! ATATTCAAAAAACAAAATCA+TGG + chr6_1:18794006-18794025 None:intergenic 15.0%
!!! TAATTTTGAAAAGTCTTTGT+AGG - chr6_1:18785645-18785664 Msa0878180:three_prime_UTR 20.0%
!!! AATTTTGAAAAGTCTTTGTA+GGG - chr6_1:18785646-18785665 Msa0878180:three_prime_UTR 20.0%
!! AACAATATCACAAAAATGAA+TGG - chr6_1:18785845-18785864 Msa0878180:exon 20.0%
!!! TTAAGAGTATTTGATCTATA+TGG - chr6_1:18786112-18786131 Msa0878180:CDS 20.0%
!! AATTTAAGAAACTGAGTTTA+AGG - chr6_1:18786297-18786316 Msa0878180:CDS 20.0%
!!! TGAATAATTTTGATTGCTTA+TGG + chr6_1:18788403-18788422 None:intergenic 20.0%
!! ATACGTTTATTCATTTGATA+AGG + chr6_1:18789166-18789185 None:intergenic 20.0%
!!! TTTTAGAAAATATTGACCAA+CGG - chr6_1:18789188-18789207 Msa0878180:intron 20.0%
!! ATCTAATTTCTCACATAAAT+AGG + chr6_1:18789267-18789286 None:intergenic 20.0%
!!! ATGTAATTTTTTTTGTTGTC+GGG + chr6_1:18790000-18790019 None:intergenic 20.0%
!! TAATAAATAGAGTTGAATGA+AGG - chr6_1:18790031-18790050 Msa0878180:intron 20.0%
!! AATAAATAGAGTTGAATGAA+GGG - chr6_1:18790032-18790051 Msa0878180:intron 20.0%
!! ATAAGCTTTCAATAAATGTT+TGG + chr6_1:18790322-18790341 None:intergenic 20.0%
!! TTATCGTAAAAAAATTACTG+TGG + chr6_1:18790641-18790660 None:intergenic 20.0%
!!! AACTTTTTCTTTGTAAATTG+TGG - chr6_1:18790808-18790827 Msa0878180:intron 20.0%
!!! TAAGCAAAAAACAACTTTTT+AGG - chr6_1:18790929-18790948 Msa0878180:intron 20.0%
!!! TAAGCAAAAAACAACTTTTT+AGG + chr6_1:18790929-18790948 None:intergenic 20.0%
!! ATATATTTAAGGATAATGCT+TGG - chr6_1:18791058-18791077 Msa0878180:intron 20.0%
!! AATGTGAAAAAAAACAAAAG+GGG + chr6_1:18791154-18791173 None:intergenic 20.0%
!! GAAATGTGAAAAAAAACAAA+AGG + chr6_1:18791156-18791175 None:intergenic 20.0%
!! TTTATTACACATACAAACAA+AGG + chr6_1:18791240-18791259 None:intergenic 20.0%
!! ATGCATATAGTAATTTGAAA+AGG - chr6_1:18791329-18791348 Msa0878180:intron 20.0%
!! GAAGGAAAAAAAGATTTAAT+TGG - chr6_1:18791459-18791478 Msa0878180:intron 20.0%
!!! TTATTTTTCTTTCTATTACC+AGG - chr6_1:18791546-18791565 Msa0878180:intron 20.0%
!! CAAAATTGTGTCAATTAAAT+TGG + chr6_1:18791643-18791662 None:intergenic 20.0%
!! AAAGTGGAATATATTGTATT+GGG - chr6_1:18791702-18791721 Msa0878180:intron 20.0%
!! TAGTTATTCAATCAATGATT+TGG + chr6_1:18791920-18791939 None:intergenic 20.0%
!!! TTTAATTTTTCGTCTTGTTA+GGG + chr6_1:18791969-18791988 None:intergenic 20.0%
!! ATTTAAAAATCCATGAGATT+AGG + chr6_1:18792286-18792305 None:intergenic 20.0%
!! TATGATTGAATATTTGCTTT+AGG - chr6_1:18792329-18792348 Msa0878180:intron 20.0%
!! TGTTTCTTCTAATATCAAAT+TGG - chr6_1:18793404-18793423 Msa0878180:CDS 20.0%
!!! GAATCTATTTTTGTGAAATT+GGG - chr6_1:18793447-18793466 Msa0878180:intron 20.0%
!! TATTAAATCATACAATTGCT+TGG - chr6_1:18793523-18793542 Msa0878180:CDS 20.0%
!! ATTAAATCATACAATTGCTT+GGG - chr6_1:18793524-18793543 Msa0878180:CDS 20.0%
!!! ATAGTATAATTTGTCTTGAA+TGG - chr6_1:18793695-18793714 Msa0878180:CDS 20.0%
!!! AACATCAACTAAGTTTTTTT+AGG - chr6_1:18793811-18793830 Msa0878180:CDS 20.0%
!!! ACTATAATTCATGATGATTT+TGG + chr6_1:18793882-18793901 None:intergenic 20.0%
!!! ATCATGAATTATAGTTCTAA+TGG - chr6_1:18793887-18793906 Msa0878180:CDS 20.0%
!! ATTTGACAGAACTTTTCAAA+GGG + chr6_1:18785697-18785716 None:intergenic 25.0%
!! AATTTGACAGAACTTTTCAA+AGG + chr6_1:18785698-18785717 None:intergenic 25.0%
!!! TATAGAAAGAGAAAAGTGTT+TGG + chr6_1:18785742-18785761 None:intergenic 25.0%
! GATAAAATGAGTATTTACCA+TGG + chr6_1:18785966-18785985 None:intergenic 25.0%
! CAACATAAACAATGGTTATT+GGG + chr6_1:18786004-18786023 None:intergenic 25.0%
! ACAACATAAACAATGGTTAT+TGG + chr6_1:18786005-18786024 None:intergenic 25.0%
!!! TTATTTTTGTTGTATTGGGT+TGG - chr6_1:18786054-18786073 Msa0878180:CDS 25.0%
! AAGTCATGAAGAATAAAGTT+TGG + chr6_1:18786854-18786873 None:intergenic 25.0%
! TTTAGGTGTTCAAATGATAA+TGG - chr6_1:18787366-18787385 Msa0878180:intron 25.0%
! AATGGTATTGTCCTAAAATT+TGG - chr6_1:18787384-18787403 Msa0878180:intron 25.0%
! TAATTCCAATGAATCAAAGT+TGG - chr6_1:18787631-18787650 Msa0878180:intron 25.0%
! CTCTATAGAAGTGAATTATA+AGG - chr6_1:18788066-18788085 Msa0878180:intron 25.0%
! TTGCGACAATATATTTACAA+GGG + chr6_1:18788105-18788124 None:intergenic 25.0%
! ATTGCGACAATATATTTACA+AGG + chr6_1:18788106-18788125 None:intergenic 25.0%
!! TTCATTATCATGTATGCTTT+TGG + chr6_1:18788242-18788261 None:intergenic 25.0%
!! AAAAGCATACATGATAATGA+AGG - chr6_1:18788241-18788260 Msa0878180:intron 25.0%
!!! TTGTATTGTGTTTGATTTTG+TGG - chr6_1:18788272-18788291 Msa0878180:intron 25.0%
! CTAAAAGTGAATTGAAAGTA+AGG - chr6_1:18788342-18788361 Msa0878180:intron 25.0%
! TATGGGTAAATTATCCAAAT+TGG - chr6_1:18788501-18788520 Msa0878180:intron 25.0%
! TCTCATTTGTTCACTTTAAA+AGG + chr6_1:18788603-18788622 None:intergenic 25.0%
! ATTTCTCACATAAATAGGAT+TGG + chr6_1:18789262-18789281 None:intergenic 25.0%
!!! TGTAATTTTTTTTGTTGTCG+GGG + chr6_1:18789999-18790018 None:intergenic 25.0%
!!! CAAGACATAGTTTCTTTTTT+GGG + chr6_1:18790124-18790143 None:intergenic 25.0%
!!! TCAAGACATAGTTTCTTTTT+TGG + chr6_1:18790125-18790144 None:intergenic 25.0%
! ATGCTTAAACAATACTCTTA+AGG - chr6_1:18790213-18790232 Msa0878180:intron 25.0%
! TTGTGGAAATGAAATTATGA+AGG - chr6_1:18790266-18790285 Msa0878180:intron 25.0%
! TGTGGAAATGAAATTATGAA+GGG - chr6_1:18790267-18790286 Msa0878180:intron 25.0%
! ACTTTCAATGTATTTCAATG+AGG + chr6_1:18790347-18790366 None:intergenic 25.0%
!!! ACCAATTTTAAAGTTGTGTT+TGG - chr6_1:18790593-18790612 Msa0878180:intron 25.0%
!! ATTTTATCTCTCTATTGCTT+TGG - chr6_1:18790769-18790788 Msa0878180:intron 25.0%
!! TTTTTGCTTATAAATGTGAC+CGG + chr6_1:18791028-18791047 None:intergenic 25.0%
! CCTTAAATATATACTCCATA+TGG + chr6_1:18791050-18791069 None:intergenic 25.0%
! CCATATGGAGTATATATTTA+AGG - chr6_1:18791047-18791066 Msa0878180:intron 25.0%
! ATGTGAAAAAAAACAAAAGG+GGG + chr6_1:18791153-18791172 None:intergenic 25.0%
! TCAAATGAGTGTTTAGATAT+AGG - chr6_1:18791379-18791398 Msa0878180:intron 25.0%
! CAAATGAGTGTTTAGATATA+GGG - chr6_1:18791380-18791399 Msa0878180:intron 25.0%
! TTGTGTCAATTAAATTGGAA+CGG + chr6_1:18791638-18791657 None:intergenic 25.0%
! GAAAGTGGAATATATTGTAT+TGG - chr6_1:18791701-18791720 Msa0878180:intron 25.0%
!! TTGAAATGTGTCAGTTATTT+TGG - chr6_1:18791789-18791808 Msa0878180:intron 25.0%
!!! TGAAATGTGTCAGTTATTTT+GGG - chr6_1:18791790-18791809 Msa0878180:intron 25.0%
!!! GGACACTTTTTTTTAGAAAA+TGG - chr6_1:18791811-18791830 Msa0878180:intron 25.0%
!! TGATTGGAATATCATCATTT+TGG - chr6_1:18791877-18791896 Msa0878180:intron 25.0%
!!! GTTTAATTTTTCGTCTTGTT+AGG + chr6_1:18791970-18791989 None:intergenic 25.0%
! AATATTCTTTCCTAATCTCA+TGG - chr6_1:18792273-18792292 Msa0878180:intron 25.0%
! ATCATATCATAGTTGCTAAT+GGG + chr6_1:18792315-18792334 None:intergenic 25.0%
! AATCATATCATAGTTGCTAA+TGG + chr6_1:18792316-18792335 None:intergenic 25.0%
! ACGTCTAAAGATAAAGTAAA+AGG - chr6_1:18792431-18792450 Msa0878180:intron 25.0%
! AGATAAAGTAAAAGGAAAGA+AGG - chr6_1:18792439-18792458 Msa0878180:intron 25.0%
! AAAGAAGGTGAAAAAAACAA+AGG - chr6_1:18792454-18792473 Msa0878180:intron 25.0%
!! GCTTTTAATGCAAACTTAAA+TGG - chr6_1:18792591-18792610 Msa0878180:intron 25.0%
!!! AGTGAAAAGCTTTTAAGTTT+GGG + chr6_1:18792795-18792814 None:intergenic 25.0%
!!! AAGTGAAAAGCTTTTAAGTT+TGG + chr6_1:18792796-18792815 None:intergenic 25.0%
! ATGAGATATAGAAAGAGAAA+AGG + chr6_1:18785748-18785767 None:intergenic 25.0%
!! ATTAATTTTTCCTTCTCCTT+TGG - chr6_1:18792856-18792875 Msa0878180:intron 25.0%
! AAACAACATCACAAAATGAA+TGG - chr6_1:18792927-18792946 Msa0878180:intron 25.0%
! TAAGATATGATAACTTACCA+TGG + chr6_1:18793030-18793049 None:intergenic 25.0%
!!! GCAAGTAGTTGATTTTATAT+AGG - chr6_1:18793336-18793355 Msa0878180:CDS 25.0%
!!! TATTTGGTTCTTTTCTTCAA+AGG - chr6_1:18793374-18793393 Msa0878180:CDS 25.0%
!!! ATTTGGTTCTTTTCTTCAAA+GGG - chr6_1:18793375-18793394 Msa0878180:CDS 25.0%
!!! CGAATCTATTTTTGTGAAAT+TGG - chr6_1:18793446-18793465 Msa0878180:intron 25.0%
! GAGTTTCAACAAAATTATGA+TGG + chr6_1:18793735-18793754 None:intergenic 25.0%
! AAAACCAATAATCGTAAACA+CGG - chr6_1:18793838-18793857 Msa0878180:CDS 25.0%
!! ATAATTCATGATGATTTTGG+TGG + chr6_1:18793879-18793898 None:intergenic 25.0%
! AAGTTATCCAGAATAAAGTT+TGG + chr6_1:18794043-18794062 None:intergenic 25.0%
!!! TTCTCAATGTTTTGAATATG+AGG + chr6_1:18794133-18794152 None:intergenic 25.0%
!! AATTTGTTCCTGAATCATTT+AGG - chr6_1:18794938-18794957 Msa0878180:CDS 25.0%
! TTCTGATTGAAATTTGTCTA+TGG + chr6_1:18795193-18795212 None:intergenic 25.0%
ATCACAAAAATGAATGGTGA+AGG - chr6_1:18785851-18785870 Msa0878180:exon 30.0%
ATTTACCATGGTTGTAGAAT+TGG + chr6_1:18785954-18785973 None:intergenic 30.0%
GATCTGATTCATGTAAACAA+TGG - chr6_1:18786176-18786195 Msa0878180:CDS 30.0%
TGTGAAATAGACTGAAATTG+TGG - chr6_1:18786557-18786576 Msa0878180:CDS 30.0%
! GATTTTGTCAAACTCACTAT+GGG + chr6_1:18786633-18786652 None:intergenic 30.0%
! TGATTTTGTCAAACTCACTA+TGG + chr6_1:18786634-18786653 None:intergenic 30.0%
TAGTGAGTTTGACAAAATCA+CGG - chr6_1:18786634-18786653 Msa0878180:CDS 30.0%
AAAAACCATAAAATTCGACG+TGG + chr6_1:18786774-18786793 None:intergenic 30.0%
!! TTCTCAATGTTTTGAGTATG+AGG + chr6_1:18786946-18786965 None:intergenic 30.0%
GTATTGTCCTAAAATTTGGT+CGG - chr6_1:18787388-18787407 Msa0878180:intron 30.0%
TATTGTCCTAAAATTTGGTC+GGG - chr6_1:18787389-18787408 Msa0878180:intron 30.0%
!! AAGATTAAGCATTGAACCTT+TGG + chr6_1:18787436-18787455 None:intergenic 30.0%
GGTAACAATTGTAGAGAAAA+TGG - chr6_1:18787486-18787505 Msa0878180:intron 30.0%
TTCATTGGAATTATCCATGA+AGG + chr6_1:18787624-18787643 None:intergenic 30.0%
TTGTTCCAACTTTGATTCAT+TGG + chr6_1:18787639-18787658 None:intergenic 30.0%
! TTGGAACAATGTTACTTCTA+TGG - chr6_1:18787650-18787669 Msa0878180:intron 30.0%
! AACATTTTCACACCAAACAT+TGG - chr6_1:18787759-18787778 Msa0878180:intron 30.0%
TTACTAGTAGTAGATGAAGA+AGG + chr6_1:18787879-18787898 None:intergenic 30.0%
ACTAGTAATAGTTGTATCTC+AGG - chr6_1:18787891-18787910 Msa0878180:CDS 30.0%
AATAGTTGTATCTCAGGTAA+TGG - chr6_1:18787897-18787916 Msa0878180:CDS 30.0%
ATCTGCTTCGTTAATTGTAA+CGG + chr6_1:18788006-18788025 None:intergenic 30.0%
! ACAATTAACGAAGCAGATTT+TGG - chr6_1:18788008-18788027 Msa0878180:intron 30.0%
TATGTAAATGATACCCACAA+AGG - chr6_1:18788433-18788452 Msa0878180:intron 30.0%
! ATGCGTCTAACTCTTTTTAT+GGG - chr6_1:18788484-18788503 Msa0878180:intron 30.0%
! TTGCTATACTTTTGCCAATT+TGG + chr6_1:18788518-18788537 None:intergenic 30.0%
!! TGAACTTAACCTAAGTTGAT+AGG + chr6_1:18788669-18788688 None:intergenic 30.0%
!! TAATGGTATGGTGTCATTAA+TGG + chr6_1:18789015-18789034 None:intergenic 30.0%
AAACTACCATCGATATTTGA+AGG - chr6_1:18789642-18789661 Msa0878180:intron 30.0%
! TCACGTTAACATTTGTTAGA+CGG + chr6_1:18789683-18789702 None:intergenic 30.0%
ACAGGTAAGTATATGAGAAT+TGG - chr6_1:18789878-18789897 Msa0878180:intron 30.0%
CAGGTAAGTATATGAGAATT+GGG - chr6_1:18789879-18789898 Msa0878180:intron 30.0%
AAGTATATGAGAATTGGGTA+TGG - chr6_1:18789884-18789903 Msa0878180:intron 30.0%
AGTATATGAGAATTGGGTAT+GGG - chr6_1:18789885-18789904 Msa0878180:intron 30.0%
TTTGTAAGGACAATGCATAA+TGG - chr6_1:18789960-18789979 Msa0878180:intron 30.0%
TTCCTTAAACAATGTCCTTA+GGG + chr6_1:18790101-18790120 None:intergenic 30.0%
!! TCAAAGTCAGAATCACTTTT+TGG - chr6_1:18790387-18790406 Msa0878180:intron 30.0%
! GTATCTTTTGACAGTATCTT+TGG - chr6_1:18790477-18790496 Msa0878180:intron 30.0%
!! GCCAAACACAACTTTAAAAT+TGG + chr6_1:18790597-18790616 None:intergenic 30.0%
! TTTAAAGTTGTGTTTGGCAT+TGG - chr6_1:18790599-18790618 Msa0878180:intron 30.0%
!! GTGTTATTTGAACAACCATT+TGG + chr6_1:18790853-18790872 None:intergenic 30.0%
AGTAGGTGTGTTAAAATTAG+AGG + chr6_1:18790877-18790896 None:intergenic 30.0%
TGCTTATAAATGTGACCATA+TGG - chr6_1:18791032-18791051 Msa0878180:intron 30.0%
TGTGAAAAAAAACAAAAGGG+GGG + chr6_1:18791152-18791171 None:intergenic 30.0%
CATACAAACAAAGGACAATT+TGG + chr6_1:18791231-18791250 None:intergenic 30.0%
! TATTAATTAGGGGCATGTTT+AGG - chr6_1:18791293-18791312 Msa0878180:intron 30.0%
TGAAAAGGAGTTTACATTCA+TGG - chr6_1:18791344-18791363 Msa0878180:intron 30.0%
! AATTGTGTCGCTGTAAATAT+CGG - chr6_1:18791513-18791532 Msa0878180:intron 30.0%
CTATTACCAGGTTATTATCA+TGG - chr6_1:18791558-18791577 Msa0878180:intron 30.0%
TGTATAAATAAAGGGGAAAG+TGG - chr6_1:18791686-18791705 Msa0878180:intron 30.0%
AGAAAATGGATCAGTTATTC+CGG - chr6_1:18791825-18791844 Msa0878180:intron 30.0%
GATAACTAAGACCAACTTAT+TGG - chr6_1:18792191-18792210 Msa0878180:intron 30.0%
!! GATTTTAGTATCATGCTCTT+TGG - chr6_1:18792978-18792997 Msa0878180:CDS 30.0%
AATTTGTCTTGAATGGTGAA+AGG - chr6_1:18793702-18793721 Msa0878180:CDS 30.0%
! TTCTAATGGTTTGTACCATA+AGG - chr6_1:18793901-18793920 Msa0878180:CDS 30.0%
TAAAGTTTGGCAACAAACTT+TGG + chr6_1:18794030-18794049 None:intergenic 30.0%
TTTGTTGCCAAACTTTATTC+TGG - chr6_1:18786844-18786863 Msa0878180:intron 30.0%
TTCAGGTGCTCAAATAATAA+CGG - chr6_1:18794532-18794551 Msa0878180:intron 30.0%
AACGGTATTGTCCTAAAATT+TGG - chr6_1:18794550-18794569 Msa0878180:intron 30.0%
TATTGTCCTAAAATTTGGTC+CGG - chr6_1:18787389-18787408 Msa0878180:intron 30.0%
ATATTTCTCTTGCAGTTTCT+AGG + chr6_1:18794622-18794641 None:intergenic 30.0%
TGACCTATTATGTTCAGATT+CGG + chr6_1:18794743-18794762 None:intergenic 30.0%
! TTGTTCAAGCTTTGATTCAA+TGG + chr6_1:18794805-18794824 None:intergenic 30.0%
GAGTACAAGAAATTTCAAGA+TGG + chr6_1:18795123-18795142 None:intergenic 30.0%
!! TCTTCTAGTTTCATGCTCTT+TGG - chr6_1:18785893-18785912 Msa0878180:CDS 35.0%
TGATTCATGTAAACAATGGC+TGG - chr6_1:18786180-18786199 Msa0878180:CDS 35.0%
AGCTGTCTTATGAAAGTAGT+TGG - chr6_1:18786327-18786346 Msa0878180:CDS 35.0%
TATGGGTAATTCCATAAACC+AGG + chr6_1:18786616-18786635 None:intergenic 35.0%
! ATGTACCACGTCGAATTTTA+TGG - chr6_1:18786766-18786785 Msa0878180:CDS 35.0%
TGCAGTAACTCAAAGCATAA+AGG - chr6_1:18786910-18786929 Msa0878180:intron 35.0%
! AAGCACTGTGGAAGATAATA+TGG - chr6_1:18787011-18787030 Msa0878180:intron 35.0%
! CAATCTTGTCTGGTTTCTTT+AGG + chr6_1:18787065-18787084 None:intergenic 35.0%
ACAATGAGAAATGTTGCTGT+CGG - chr6_1:18787201-18787220 Msa0878180:intron 35.0%
ATTCAACATTTGAGCCATGT+TGG + chr6_1:18787335-18787354 None:intergenic 35.0%
! CATTTTCCCGACCAAATTTT+AGG + chr6_1:18787398-18787417 None:intergenic 35.0%
TTGCATCAACATTTCTCTTG+TGG + chr6_1:18787464-18787483 None:intergenic 35.0%
AAGAGAAATGTTGATGCAAG+AGG - chr6_1:18787465-18787484 Msa0878180:intron 35.0%
CAATTGTAGAGAAAATGGAG+AGG - chr6_1:18787491-18787510 Msa0878180:intron 35.0%
TATTCGAATCCGAACAGAAT+AGG - chr6_1:18787571-18787590 Msa0878180:intron 35.0%
AGGTTTAGACCTATTCTGTT+CGG + chr6_1:18787583-18787602 None:intergenic 35.0%
AAGTAGGATCAATGCCATAA+GGG + chr6_1:18787701-18787720 None:intergenic 35.0%
ACAAATTGCAAGCCAATGTT+TGG + chr6_1:18787774-18787793 None:intergenic 35.0%
! AATTTGTTCCTGCATCAAAC+AGG - chr6_1:18787787-18787806 Msa0878180:intron 35.0%
AATGTGTCCATAGGTTCAAA+TGG - chr6_1:18787843-18787862 Msa0878180:intron 35.0%
CATATGTGTTTGCCAAGAAT+TGG + chr6_1:18787927-18787946 None:intergenic 35.0%
ATATGTGAGCATTTGTACGA+AGG - chr6_1:18787979-18787998 Msa0878180:intron 35.0%
AACGTGCTATAGACTACATT+AGG - chr6_1:18788174-18788193 Msa0878180:intron 35.0%
AGTGAATTGAAAGTAAGGTG+AGG - chr6_1:18788347-18788366 Msa0878180:intron 35.0%
TAAAAAGAGTTAGACGCATG+AGG + chr6_1:18788483-18788502 None:intergenic 35.0%
! CATGCGTCTAACTCTTTTTA+TGG - chr6_1:18788483-18788502 Msa0878180:intron 35.0%
ATGTGATGTCCTATCAACTT+AGG - chr6_1:18788657-18788676 Msa0878180:intron 35.0%
TCAACTTAGGTTAAGTTCAC+AGG - chr6_1:18788670-18788689 Msa0878180:intron 35.0%
TTAGGTTAAGTTCACAGGAT+AGG - chr6_1:18788675-18788694 Msa0878180:intron 35.0%
! CAACTCGTTTCAAGCAATTT+TGG + chr6_1:18788849-18788868 None:intergenic 35.0%
! TTGAAACGAGTTGAATTTCG+AGG - chr6_1:18788856-18788875 Msa0878180:intron 35.0%
AATAGTTGAACCTACCTCTT+CGG - chr6_1:18788970-18788989 Msa0878180:intron 35.0%
CATTAAATCCTGGCCATTAA+TGG + chr6_1:18789093-18789112 None:intergenic 35.0%
CATTAATGGCCAGGATTTAA+TGG - chr6_1:18789091-18789110 Msa0878180:intron 35.0%
AGAAAATATTGACCAACGGT+TGG - chr6_1:18789192-18789211 Msa0878180:intron 35.0%
!!! TTTTTTGTTTCACCAACCGT+TGG + chr6_1:18789207-18789226 None:intergenic 35.0%
CTCACATAAATAGGATTGGA+GGG + chr6_1:18789258-18789277 None:intergenic 35.0%
TCTCACATAAATAGGATTGG+AGG + chr6_1:18789259-18789278 None:intergenic 35.0%
CTGAACCAAATCCAATTTGA+CGG - chr6_1:18789432-18789451 Msa0878180:intron 35.0%
TGAACCAAATCCAATTTGAC+GGG - chr6_1:18789433-18789452 Msa0878180:intron 35.0%
AAAACCCGTCAAATTGGATT+TGG + chr6_1:18789440-18789459 None:intergenic 35.0%
ATACCCAAACCCAATCAAAA+CGG + chr6_1:18789465-18789484 None:intergenic 35.0%
!! TTTTGATTGGGTTTGGGTAT+GGG - chr6_1:18789465-18789484 Msa0878180:intron 35.0%
! TTTTCCCCGATTTCAAAACA+CGG - chr6_1:18789494-18789513 Msa0878180:intron 35.0%
!!! TAAACCCGTGTTTTGAAATC+GGG + chr6_1:18789502-18789521 None:intergenic 35.0%
!!! CTAAACCCGTGTTTTGAAAT+CGG + chr6_1:18789503-18789522 None:intergenic 35.0%
GTTGATCCTTCAAATATCGA+TGG + chr6_1:18789651-18789670 None:intergenic 35.0%
TGTTAACGTGAGTGTATTGT+TGG - chr6_1:18789692-18789711 Msa0878180:intron 35.0%
ATGTATTACAACGTTGCTCT+TGG - chr6_1:18789718-18789737 Msa0878180:intron 35.0%
AAATTATTCAATGCAGGGAC+AGG - chr6_1:18789776-18789795 Msa0878180:intron 35.0%
AATTATTCAATGCAGGGACA+GGG - chr6_1:18789777-18789796 Msa0878180:intron 35.0%
GTATATGAGAATTGGGTATG+GGG - chr6_1:18789886-18789905 Msa0878180:intron 35.0%
AAACTGATAGGCATGACAAT+GGG + chr6_1:18789943-18789962 None:intergenic 35.0%
CATTGTCCTTACAAACTGAT+AGG + chr6_1:18789955-18789974 None:intergenic 35.0%
GTTCCTTAAACAATGTCCTT+AGG + chr6_1:18790102-18790121 None:intergenic 35.0%
! TGATGATGTGAGAAAGAGAA+GGG + chr6_1:18790436-18790455 None:intergenic 35.0%
! ATGATGATGTGAGAAAGAGA+AGG + chr6_1:18790437-18790456 None:intergenic 35.0%
ACTGTCAAAAGATACTGTAG+TGG + chr6_1:18790472-18790491 None:intergenic 35.0%
!! GGAGTATTTGCTATTACAGT+AGG + chr6_1:18790894-18790913 None:intergenic 35.0%
TGAGTGTTTAGATATAGGGA+CGG - chr6_1:18791384-18791403 Msa0878180:intron 35.0%
GAAAAACCCAATAGGTAAAG+GGG + chr6_1:18791439-18791458 None:intergenic 35.0%
CGAAAAACCCAATAGGTAAA+GGG + chr6_1:18791440-18791459 None:intergenic 35.0%
TCGAAAAACCCAATAGGTAA+AGG + chr6_1:18791441-18791460 None:intergenic 35.0%
!! TTACCTATTGGGTTTTTCGA+AGG - chr6_1:18791441-18791460 Msa0878180:intron 35.0%
TTTCCTTCGAAAAACCCAAT+AGG + chr6_1:18791447-18791466 None:intergenic 35.0%
AAGCAACCATGATAATAACC+TGG + chr6_1:18791567-18791586 None:intergenic 35.0%
TGTCAATTAAATTGGAACGG+AGG + chr6_1:18791635-18791654 None:intergenic 35.0%
GAAAATGGATCAGTTATTCC+GGG - chr6_1:18791826-18791845 Msa0878180:intron 35.0%
ACATAAAGGACTAAAGACGA+AGG - chr6_1:18792089-18792108 Msa0878180:intron 35.0%
! CTTTTCTCTCTCCAATAAGT+TGG + chr6_1:18792205-18792224 None:intergenic 35.0%
!! TGTTCTTTTGCACTTTTTGC+AGG - chr6_1:18792528-18792547 Msa0878180:intron 35.0%
!! GTTCTTTTGCACTTTTTGCA+GGG - chr6_1:18792529-18792548 Msa0878180:intron 35.0%
!! AAATGTTAACTTGTGCCCTT+GGG - chr6_1:18792614-18792633 Msa0878180:intron 35.0%
!! AGAGAAAAGGAGAAAGTGTT+CGG + chr6_1:18792825-18792844 None:intergenic 35.0%
CATCACAAAATGAATGGTGA+AGG - chr6_1:18792933-18792952 Msa0878180:intron 35.0%
!!! TTGGGCTCTTGTTTTTTTCA+AGG - chr6_1:18793542-18793561 Msa0878180:CDS 35.0%
! AAAAGTTTACACAAGCACTG+TGG - chr6_1:18794186-18794205 Msa0878180:intron 35.0%
! AAGCACTGTGGAAGATAATA+TGG - chr6_1:18787011-18787030 Msa0878180:intron 35.0%
AGACAAAGTCCTCAAAAAAC+CGG - chr6_1:18794240-18794259 Msa0878180:intron 35.0%
ACAATGAGAAACGTTCCTTT+CGG - chr6_1:18794388-18794407 Msa0878180:intron 35.0%
! ATTTGAGGTTGAAATTCCAC+CGG + chr6_1:18794473-18794492 None:intergenic 35.0%
! CATTTTCCGGACCAAATTTT+AGG + chr6_1:18794564-18794583 None:intergenic 35.0%
! TCATGGACATATGCATTTTC+CGG + chr6_1:18794577-18794596 None:intergenic 35.0%
GCTAACAAATGTAGAGGAAA+TGG - chr6_1:18794652-18794671 Msa0878180:intron 35.0%
TGTGTATCTTCTGTGACAAA+TGG - chr6_1:18794694-18794713 Msa0878180:intron 35.0%
TAGCCGAATCTGAACATAAT+AGG - chr6_1:18794737-18794756 Msa0878180:intron 35.0%
ATTGAAGATTGAACCATGGA+AGG + chr6_1:18794832-18794851 None:intergenic 35.0%
TTGCATTGAAGATTGAACCA+TGG + chr6_1:18794836-18794855 None:intergenic 35.0%
ATGCAAATGTGTAACCCTTA+TGG - chr6_1:18794850-18794869 Msa0878180:intron 35.0%
ACAAATTGCAAGCCAATGTT+CGG + chr6_1:18787774-18787793 None:intergenic 35.0%
GTTCCTGAATCATTTAGGAA+TGG - chr6_1:18794943-18794962 Msa0878180:CDS 35.0%
GATCCATTCCTAAATGATTC+AGG + chr6_1:18794949-18794968 None:intergenic 35.0%
AGGAATGGATCAGTTTCAAT+AGG - chr6_1:18794958-18794977 Msa0878180:CDS 35.0%
TAGCTAGTAGTAGATGAAGA+AGG + chr6_1:18795003-18795022 None:intergenic 35.0%
TTGATCGAAGACACTAATCT+TGG - chr6_1:18795084-18795103 Msa0878180:five_prime_UTR 35.0%
! CTTGTACTCATCCTTTTCAA+TGG - chr6_1:18795134-18795153 Msa0878180:five_prime_UTR 35.0%
TTGCATATGCTCCATTGAAA+AGG + chr6_1:18795148-18795167 None:intergenic 35.0%
GCTCTTTGGTAAGAAGATTC+CGG - chr6_1:18785907-18785926 Msa0878180:CDS 40.0%
TGAATCTGAGAAGAACTCAC+CGG + chr6_1:18785929-18785948 None:intergenic 40.0%
GGTAATTCCATAAACCAGGA+GGG + chr6_1:18786612-18786631 None:intergenic 40.0%
! AAAAGTGAACACAAGCACTG+TGG - chr6_1:18786999-18787018 Msa0878180:intron 40.0%
GGACATTGAACAATCTTGTC+TGG + chr6_1:18787075-18787094 None:intergenic 40.0%
! GTGTCGAAACTTTTGCATCT+CGG + chr6_1:18787096-18787115 None:intergenic 40.0%
ACTACAACGTCAATCAACCT+CGG - chr6_1:18787136-18787155 Msa0878180:intron 40.0%
TGTCACAGATATTGGACCAA+CGG - chr6_1:18787174-18787193 Msa0878180:intron 40.0%
ATTTCTCATTGTTCCACCGT+TGG + chr6_1:18787193-18787212 None:intergenic 40.0%
!! AGAGTCGTTGGTTTCTAAAC+TGG + chr6_1:18787304-18787323 None:intergenic 40.0%
TAGAAACCAACGACTCTTCT+AGG - chr6_1:18787307-18787326 Msa0878180:intron 40.0%
CTCAAATGTTGAATCTGCTG+CGG - chr6_1:18787341-18787360 Msa0878180:intron 40.0%
! TTGAATCTGCTGCGGTTTTT+AGG - chr6_1:18787349-18787368 Msa0878180:intron 40.0%
TGTGTATCGTCTGTGACAAA+CGG - chr6_1:18787528-18787547 Msa0878180:intron 40.0%
! GAATTATCCATGAAGGTGCA+GGG + chr6_1:18787617-18787636 None:intergenic 40.0%
ATGCAGATGTGTAACCCTTA+TGG - chr6_1:18787684-18787703 Msa0878180:intron 40.0%
GAAGTAGGATCAATGCCATA+AGG + chr6_1:18787702-18787721 None:intergenic 40.0%
TTGATCCTACTTCAATGCAG+TGG - chr6_1:18787709-18787728 Msa0878180:intron 40.0%
ATGTTTGTAACCTCAACCCT+CGG + chr6_1:18787744-18787763 None:intergenic 40.0%
AGGAATGGAACACCTTTGTA+TGG - chr6_1:18787807-18787826 Msa0878180:intron 40.0%
CCATTTCCACTACCATACAA+AGG + chr6_1:18787822-18787841 None:intergenic 40.0%
!! CCTTTGTATGGTAGTGGAAA+TGG - chr6_1:18787819-18787838 Msa0878180:intron 40.0%
GGAAATGGAAATGTGTCCAT+AGG - chr6_1:18787834-18787853 Msa0878180:intron 40.0%
AATGCAGCCATTTGAACCTA+TGG + chr6_1:18787853-18787872 None:intergenic 40.0%
! GTAGTCTATAGCACGTTTTG+AGG + chr6_1:18788171-18788190 None:intergenic 40.0%
GCTTAGAGGTAGAAGAATTG+TGG - chr6_1:18788369-18788388 Msa0878180:intron 40.0%
AACTTAGTCTGTGCCTTTGT+GGG + chr6_1:18788449-18788468 None:intergenic 40.0%
ATAGTTGAACCTACCTCTTC+GGG - chr6_1:18788971-18788990 Msa0878180:intron 40.0%
GACACCATACCATTAGATCT+AGG - chr6_1:18789020-18789039 Msa0878180:intron 40.0%
TACGAACTGAGCTAAGTTCA+CGG + chr6_1:18789376-18789395 None:intergenic 40.0%
! CAAATTGGATTTGGTTCAGG+TGG + chr6_1:18789431-18789450 None:intergenic 40.0%
! CGTCAAATTGGATTTGGTTC+AGG + chr6_1:18789434-18789453 None:intergenic 40.0%
TACCCAAACCCAATCAAAAC+GGG + chr6_1:18789464-18789483 None:intergenic 40.0%
!!! GTTTTGATTGGGTTTGGGTA+TGG - chr6_1:18789464-18789483 Msa0878180:intron 40.0%
TTTCCCCGATTTCAAAACAC+GGG - chr6_1:18789495-18789514 Msa0878180:intron 40.0%
!!! AAACCCGTGTTTTGAAATCG+GGG + chr6_1:18789501-18789520 None:intergenic 40.0%
CGATTTCAAAACACGGGTTT+AGG - chr6_1:18789501-18789520 Msa0878180:intron 40.0%
! TTTGGGACGAGTTTGTGTAT+GGG + chr6_1:18789560-18789579 None:intergenic 40.0%
! ATTTGGGACGAGTTTGTGTA+TGG + chr6_1:18789561-18789580 None:intergenic 40.0%
ATACAATTTCTCATCCCCGT+TGG - chr6_1:18789841-18789860 Msa0878180:intron 40.0%
AACTGATAGGCATGACAATG+GGG + chr6_1:18789942-18789961 None:intergenic 40.0%
CAAACTGATAGGCATGACAA+TGG + chr6_1:18789944-18789963 None:intergenic 40.0%
GTCATGCCTATCAGTTTGTA+AGG - chr6_1:18789946-18789965 Msa0878180:intron 40.0%
AGGACAATGCATAATGGTTC+AGG - chr6_1:18789966-18789985 Msa0878180:intron 40.0%
GGACAATGCATAATGGTTCA+GGG - chr6_1:18789967-18789986 Msa0878180:intron 40.0%
TGCCCTAAGGACATTGTTTA+AGG - chr6_1:18790096-18790115 Msa0878180:intron 40.0%
! TTTTGGCCCATTGTTCCTTT+CGG - chr6_1:18790404-18790423 Msa0878180:intron 40.0%
GATGATGTGAGAAAGAGAAG+GGG + chr6_1:18790435-18790454 None:intergenic 40.0%
GATACTGTAGTGGCTAAGAA+TGG + chr6_1:18790462-18790481 None:intergenic 40.0%
TTGGCCACTACTACATTTCT+TGG - chr6_1:18790496-18790515 Msa0878180:intron 40.0%
AGAGCCAAGAAATGTAGTAG+TGG + chr6_1:18790503-18790522 None:intergenic 40.0%
GTCTTCTCTCTCTTCATTCT+TGG - chr6_1:18790570-18790589 Msa0878180:intron 40.0%
GTAATAGCAAATACTCCCTC+CGG - chr6_1:18790897-18790916 Msa0878180:intron 40.0%
TGCTTATAAATGTGACCGGA+GGG + chr6_1:18790915-18790934 None:intergenic 40.0%
TTGCTTATAAATGTGACCGG+AGG + chr6_1:18790916-18790935 None:intergenic 40.0%
CAAAAGGGGGGTTACATTAA+GGG + chr6_1:18791140-18791159 None:intergenic 40.0%
ACAAAAGGGGGGTTACATTA+AGG + chr6_1:18791141-18791160 None:intergenic 40.0%
TGTTTAGATATAGGGACGGA+GGG - chr6_1:18791388-18791407 Msa0878180:intron 40.0%
ACTCTTACCCCTTTACCTAT+TGG - chr6_1:18791429-18791448 Msa0878180:intron 40.0%
CTCTTACCCCTTTACCTATT+GGG - chr6_1:18791430-18791449 Msa0878180:intron 40.0%
! GTCTTGTTAGGGTGTTCATT+TGG + chr6_1:18791958-18791977 None:intergenic 40.0%
TAAAGGACTAAAGACGAAGG+AGG - chr6_1:18792092-18792111 Msa0878180:intron 40.0%
AAAGGACTAAAGACGAAGGA+GGG - chr6_1:18792093-18792112 Msa0878180:intron 40.0%
!! GAAATGTTAACTTGTGCCCT+TGG - chr6_1:18792613-18792632 Msa0878180:intron 40.0%
CTTCCTAACTTATGTCCCAA+GGG + chr6_1:18792632-18792651 None:intergenic 40.0%
TCTTCCTAACTTATGTCCCA+AGG + chr6_1:18792633-18792652 None:intergenic 40.0%
GTTAGGAAGACAAATGTCGA+AGG - chr6_1:18792643-18792662 Msa0878180:intron 40.0%
!! CATGTTAACTTGTGCCCTTA+GGG + chr6_1:18792771-18792790 None:intergenic 40.0%
!! TCATGTTAACTTGTGCCCTT+AGG + chr6_1:18792772-18792791 None:intergenic 40.0%
CAAAAACACACCAAAGGAGA+AGG + chr6_1:18792869-18792888 None:intergenic 40.0%
ACAGCTCAAAAACACACCAA+AGG + chr6_1:18792875-18792894 None:intergenic 40.0%
! GCTCTTTGGAAAGAAGATTC+AGG - chr6_1:18792992-18793011 Msa0878180:CDS 40.0%
ACTTACCATGGTTGAAGAGT+TGG + chr6_1:18793018-18793037 None:intergenic 40.0%
GTCACCGTGTTTACGATTAT+TGG + chr6_1:18793845-18793864 None:intergenic 40.0%
TGCAGTAACTCAAAGCACAA+AGG - chr6_1:18794097-18794116 Msa0878180:intron 40.0%
!!! CAATCTTGTCCGGTTTTTTG+AGG + chr6_1:18794252-18794271 None:intergenic 40.0%
GGACATTGAACAATCTTGTC+CGG + chr6_1:18787075-18787094 None:intergenic 40.0%
GTGTTGAAACTGTTGCATCT+TGG + chr6_1:18794283-18794302 None:intergenic 40.0%
ACTACAATGTCAGTCAACCT+CGG - chr6_1:18794323-18794342 Msa0878180:intron 40.0%
!! GTCGGAAGTGTCATAGATAT+TGG - chr6_1:18794353-18794372 Msa0878180:intron 40.0%
TGTCATAGATATTGGACTGC+CGG - chr6_1:18794361-18794380 Msa0878180:intron 40.0%
AACGTTTCTCATTGTTCCAC+CGG + chr6_1:18794383-18794402 None:intergenic 40.0%
! GGCGTTGCTTTCAAAATTTG+AGG + chr6_1:18794488-18794507 None:intergenic 40.0%
TCCATGAATCTAACGATTCG+AGG - chr6_1:18794590-18794609 Msa0878180:intron 40.0%
ACCTCGAATCGTTAGATTCA+TGG + chr6_1:18794594-18794613 None:intergenic 40.0%
GCAAGTGCTAACAAATGTAG+AGG - chr6_1:18794646-18794665 Msa0878180:intron 40.0%
GTGACAAATGGTTATACTCG+AGG - chr6_1:18794706-18794725 Msa0878180:intron 40.0%
GAATCATCCATGAAGATGCA+GGG + chr6_1:18794783-18794802 None:intergenic 40.0%
CTTGAACAATGTTCCTTCCA+TGG - chr6_1:18794816-18794835 Msa0878180:intron 40.0%
AACTAGGATCAACGCCATAA+GGG + chr6_1:18794867-18794886 None:intergenic 40.0%
TTGATCCTAGTTCAATGCAG+TGG - chr6_1:18794875-18794894 Msa0878180:intron 40.0%
ATGTTCGGTCTGAAGATGTT+CGG + chr6_1:18794910-18794929 None:intergenic 40.0%
AACATCTTCAGACCGAACAT+TGG - chr6_1:18794910-18794929 Msa0878180:CDS 40.0%
! AATCTCTGGTGTGTTTTCCA+AGG + chr6_1:18795059-18795078 None:intergenic 40.0%
TTCGATCAAGACAGAATCTC+TGG + chr6_1:18795073-18795092 None:intergenic 40.0%
GGTGAGTTCTTCTCAGATTC+AGG - chr6_1:18785928-18785947 Msa0878180:CDS 45.0%
TCAGGCCAATTCTACAACCA+TGG - chr6_1:18785946-18785965 Msa0878180:CDS 45.0%
AACATAAGAGATAGCCCTCC+TGG - chr6_1:18786595-18786614 Msa0878180:CDS 45.0%
GGGTAATTCCATAAACCAGG+AGG + chr6_1:18786613-18786632 None:intergenic 45.0%
ATCAACCTCGGCATTTCTGT+CGG - chr6_1:18787148-18787167 Msa0878180:intron 45.0%
GTCGGAGTTGTCACAGATAT+TGG - chr6_1:18787166-18787185 Msa0878180:intron 45.0%
CATCGGACACTACAATCATG+TGG + chr6_1:18787269-18787288 None:intergenic 45.0%
CACATGATTGTAGTGTCCGA+TGG - chr6_1:18787267-18787286 Msa0878180:intron 45.0%
TTGGTTTCTAAACTGGCGGT+CGG + chr6_1:18787297-18787316 None:intergenic 45.0%
!! GTCGTTGGTTTCTAAACTGG+CGG + chr6_1:18787301-18787320 None:intergenic 45.0%
TTGGTACCTAGAAGAGTCGT+TGG + chr6_1:18787316-18787335 None:intergenic 45.0%
GACTCTTCTAGGTACCAACA+TGG - chr6_1:18787318-18787337 Msa0878180:intron 45.0%
ACCTTTGGATTCATCGAGAG+AGG + chr6_1:18787421-18787440 None:intergenic 45.0%
! GGAATTATCCATGAAGGTGC+AGG + chr6_1:18787618-18787637 None:intergenic 45.0%
TGACACCACTGCATTGAAGT+AGG + chr6_1:18787717-18787736 None:intergenic 45.0%
GTTCCTGCATCAAACAGGAA+TGG - chr6_1:18787792-18787811 Msa0878180:intron 45.0%
GTTCCATTCCTGTTTGATGC+AGG + chr6_1:18787798-18787817 None:intergenic 45.0%
GGAACACCTTTGTATGGTAG+TGG - chr6_1:18787813-18787832 Msa0878180:intron 45.0%
! GGTAATGGCACACCAATTCT+TGG - chr6_1:18787912-18787931 Msa0878180:intron 45.0%
GAAAGTAAGGTGAGGCTTAG+AGG - chr6_1:18788355-18788374 Msa0878180:intron 45.0%
GAACTTAGTCTGTGCCTTTG+TGG + chr6_1:18788450-18788469 None:intergenic 45.0%
AAGTATTTCCCAACCCGAAG+AGG + chr6_1:18788987-18789006 None:intergenic 45.0%
!! CTTCGGGTTGGGAAATACTT+TGG - chr6_1:18788987-18789006 Msa0878180:intron 45.0%
GTGGCCTAGATCTAATGGTA+TGG + chr6_1:18789027-18789046 None:intergenic 45.0%
AACGTGTGGCCTAGATCTAA+TGG + chr6_1:18789032-18789051 None:intergenic 45.0%
ATCACACACACACACACACT+TGG + chr6_1:18789057-18789076 None:intergenic 45.0%
TGTGTGTGTGATGTGTGTGT+GGG - chr6_1:18789065-18789084 Msa0878180:intron 45.0%
ATGGCCAGGATTTAATGGCA+CGG - chr6_1:18789096-18789115 Msa0878180:intron 45.0%
!! TAATGGCACGGTGCCATTAA+TGG - chr6_1:18789108-18789127 Msa0878180:intron 45.0%
GTGAACTTAGCTCAGTTCGT+AGG - chr6_1:18789375-18789394 Msa0878180:intron 45.0%
GACAACAAAACTCATACCCG+CGG - chr6_1:18789401-18789420 Msa0878180:intron 45.0%
!!! GGGTTTTCCCCGTTTTGATT+GGG - chr6_1:18789453-18789472 Msa0878180:intron 45.0%
!!! TTCCCCGTTTTGATTGGGTT+TGG - chr6_1:18789458-18789477 Msa0878180:intron 45.0%
!!! TCCCCGTTTTGATTGGGTTT+GGG - chr6_1:18789459-18789478 Msa0878180:intron 45.0%
ACCCAAACCCAATCAAAACG+GGG + chr6_1:18789463-18789482 None:intergenic 45.0%
ATTGGGTTTGGGTATGGGTA+TGG - chr6_1:18789470-18789489 Msa0878180:intron 45.0%
TTGGGTTTGGGTATGGGTAT+GGG - chr6_1:18789471-18789490 Msa0878180:intron 45.0%
TTTCTCATCCCCGTTGGATA+TGG - chr6_1:18789847-18789866 Msa0878180:intron 45.0%
TTCTCATCCCCGTTGGATAT+GGG - chr6_1:18789848-18789867 Msa0878180:intron 45.0%
TTACCCTACCCATATCCAAC+GGG + chr6_1:18789859-18789878 None:intergenic 45.0%
GTTACCCTACCCATATCCAA+CGG + chr6_1:18789860-18789879 None:intergenic 45.0%
TTGGATATGGGTAGGGTAAC+AGG - chr6_1:18789860-18789879 Msa0878180:intron 45.0%
ATGAGAATTGGGTATGGGGA+CGG - chr6_1:18789890-18789909 Msa0878180:intron 45.0%
TCTTGCTAACAAGTGCCCTA+AGG - chr6_1:18790083-18790102 Msa0878180:intron 45.0%
TGAAGAGAGAGAAGACAGCT+GGG + chr6_1:18790566-18790585 None:intergenic 45.0%
ATGAAGAGAGAGAAGACAGC+TGG + chr6_1:18790567-18790586 None:intergenic 45.0%
CATCACGAATTTACCGATCG+CGG - chr6_1:18791081-18791100 Msa0878180:intron 45.0%
GTGTTTAGATATAGGGACGG+AGG - chr6_1:18791387-18791406 Msa0878180:intron 45.0%
GGGTAAGAGTTTCAAGCCTT+CGG + chr6_1:18791419-18791438 None:intergenic 45.0%
ATGGATCAGTTATTCCGGGA+CGG - chr6_1:18791830-18791849 Msa0878180:intron 45.0%
ATTATATACTCCCTCCGTCC+CGG + chr6_1:18791847-18791866 None:intergenic 45.0%
!! CTCCTTAACTTGTGCCCTAA+GGG - chr6_1:18792754-18792773 Msa0878180:intron 45.0%
! GTCAACCTCGGCATTTTTGT+CGG - chr6_1:18794335-18794354 Msa0878180:intron 45.0%
CCTGAAAACTGCAGCAGATT+CGG + chr6_1:18794518-18794537 None:intergenic 45.0%
GGAATCATCCATGAAGATGC+AGG + chr6_1:18794784-18794803 None:intergenic 45.0%
GAACTAGGATCAACGCCATA+AGG + chr6_1:18794868-18794887 None:intergenic 45.0%
GTCTGAAGATGTTCGGCATA+TGG + chr6_1:18794903-18794922 None:intergenic 45.0%
GCTAGTCATAGTTGTTGCTC+CGG - chr6_1:18795019-18795038 Msa0878180:five_prime_UTR 45.0%
TCATAGTTGTTGCTCCGGTA+TGG - chr6_1:18795024-18795043 Msa0878180:five_prime_UTR 45.0%
! CTGGTGTGTTTTCCAAGGAT+CGG + chr6_1:18795054-18795073 None:intergenic 45.0%
!! TTTATCTAATTAAAAAAATT+AGG - chr6_1:18789329-18789348 Msa0878180:intron 5.0%
!!! TATTTTTTAACATATTTATT+TGG - chr6_1:18793187-18793206 Msa0878180:intron 5.0%
GAGATAGCCCTCCTGGTTTA+TGG - chr6_1:18786602-18786621 Msa0878180:CDS 50.0%
CACAGATATTGGACCAACGG+TGG - chr6_1:18787177-18787196 Msa0878180:intron 50.0%
AGAAATGTTGCTGTCGGTGC+AGG - chr6_1:18787207-18787226 Msa0878180:intron 50.0%
GAAATGTTGCTGTCGGTGCA+GGG - chr6_1:18787208-18787227 Msa0878180:intron 50.0%
GCCTCTCTCGATGAATCCAA+AGG - chr6_1:18787417-18787436 Msa0878180:intron 50.0%
GTGACAAACGGTCATACTCG+AGG - chr6_1:18787540-18787559 Msa0878180:intron 50.0%
TTGAACCTACCTCTTCGGGT+TGG - chr6_1:18788975-18788994 Msa0878180:intron 50.0%
! TGAACCTACCTCTTCGGGTT+GGG - chr6_1:18788976-18788995 Msa0878180:intron 50.0%
ATTTCCCAACCCGAAGAGGT+AGG + chr6_1:18788983-18789002 None:intergenic 50.0%
ACACACACTTGGACAACGTG+TGG + chr6_1:18789046-18789065 None:intergenic 50.0%
GTGTGTGTGTGATGTGTGTG+TGG - chr6_1:18789064-18789083 Msa0878180:intron 50.0%
!! GTGTGTGTGGGTGCCATTAA+TGG - chr6_1:18789077-18789096 Msa0878180:intron 50.0%
!! CAGCACTTGGGTGCCATTAA+TGG + chr6_1:18789124-18789143 None:intergenic 50.0%
! ACCCAAGTGCTGCTCTCTTT+GGG - chr6_1:18789132-18789151 Msa0878180:intron 50.0%
ACCCAAAGAGAGCAGCACTT+GGG + chr6_1:18789136-18789155 None:intergenic 50.0%
AACCCAAAGAGAGCAGCACT+TGG + chr6_1:18789137-18789156 None:intergenic 50.0%
TTGGTTCAGGTGGTTAACCG+CGG + chr6_1:18789421-18789440 None:intergenic 50.0%
ACGGGGAAAACCCGTCAAAT+TGG + chr6_1:18789446-18789465 None:intergenic 50.0%
!! CGGGTTTTCCCCGTTTTGAT+TGG - chr6_1:18789452-18789471 Msa0878180:intron 50.0%
!! AGGACGAGTGACGGGTATAT+AGG - chr6_1:18789521-18789540 Msa0878180:intron 50.0%
GTTTGTGTATGGGTTCGAGG+TGG + chr6_1:18789550-18789569 None:intergenic 50.0%
CGAGTTTGTGTATGGGTTCG+AGG + chr6_1:18789553-18789572 None:intergenic 50.0%
ATCCCCGTTGGATATGGGTA+GGG - chr6_1:18789853-18789872 Msa0878180:intron 50.0%
TACCCTACCCATATCCAACG+GGG + chr6_1:18789858-18789877 None:intergenic 50.0%
TGAGAATTGGGTATGGGGAC+GGG - chr6_1:18789891-18789910 Msa0878180:intron 50.0%
GACCCACCGAAAGGAACAAT+GGG + chr6_1:18790413-18790432 None:intergenic 50.0%
GAAGAGAGAGAAGACAGCTG+GGG + chr6_1:18790565-18790584 None:intergenic 50.0%
ACTGTGGAGCTTCGTGATTC+AGG + chr6_1:18790625-18790644 None:intergenic 50.0%
GGGTTACATTAAGGGACGGA+GGG + chr6_1:18791132-18791151 None:intergenic 50.0%
AGGGGGGTTACATTAAGGGA+CGG + chr6_1:18791136-18791155 None:intergenic 50.0%
ATCAGTTATTCCGGGACGGA+GGG - chr6_1:18791834-18791853 Msa0878180:intron 50.0%
GTGCCCTTGGGACATAAGTT+AGG - chr6_1:18792626-18792645 Msa0878180:intron 50.0%
!! GCTCCTTAACTTGTGCCCTA+AGG - chr6_1:18792753-18792772 Msa0878180:intron 50.0%
TGCCCTTAGGGCACAAGTTA+AGG + chr6_1:18792759-18792778 None:intergenic 50.0%
TCAGGCCAACTCTTCAACCA+TGG - chr6_1:18793010-18793029 Msa0878180:CDS 50.0%
ATCGTAAACACGGTGACACG+TGG - chr6_1:18793848-18793867 Msa0878180:CDS 50.0%
CACTTCCGACAAAAATGCCG+AGG + chr6_1:18794343-18794362 None:intergenic 50.0%
CATAGATATTGGACTGCCGG+TGG - chr6_1:18794364-18794383 Msa0878180:intron 50.0%
! AGAAACGTTCCTTTCGGTGC+AGG - chr6_1:18794394-18794413 Msa0878180:intron 50.0%
! GAAACGTTCCTTTCGGTGCA+GGG - chr6_1:18794395-18794414 Msa0878180:intron 50.0%
CGCCACATGATTGTAGCTTC+CGG - chr6_1:18794451-18794470 Msa0878180:intron 50.0%
CACCGGAAGCTACAATCATG+TGG + chr6_1:18794456-18794475 None:intergenic 50.0%
CACATGATTGTAGCTTCCGG+TGG - chr6_1:18794454-18794473 Msa0878180:intron 50.0%
! CCGAATCTGCTGCAGTTTTC+AGG - chr6_1:18794515-18794534 Msa0878180:intron 50.0%
AGAGCTACCCTGCATCTTCA+TGG - chr6_1:18794773-18794792 Msa0878180:intron 50.0%
TGGCACCACTGCATTGAACT+AGG + chr6_1:18794883-18794902 None:intergenic 50.0%
CAAGGATCGGTGATCCATAC+CGG + chr6_1:18795041-18795060 None:intergenic 50.0%
CAACTCCGACAGAAATGCCG+AGG + chr6_1:18787156-18787175 None:intergenic 55.0%
ACTGGCGGTCGGAATTCCAT+CGG + chr6_1:18787286-18787305 None:intergenic 55.0%
AGAGCTACCCTGCACCTTCA+TGG - chr6_1:18787607-18787626 Msa0878180:intron 55.0%
!! TGTGGGTGCCATTAATGGCC+AGG - chr6_1:18789082-18789101 Msa0878180:intron 55.0%
! GGCACCGTGCCATTAAATCC+TGG + chr6_1:18789103-18789122 None:intergenic 55.0%
! CACCCAAGTGCTGCTCTCTT+TGG - chr6_1:18789131-18789150 Msa0878180:intron 55.0%
TGGTTCAGGTGGTTAACCGC+GGG + chr6_1:18789420-18789439 None:intergenic 55.0%
! CACGGGTTTAGGACGAGTGA+CGG - chr6_1:18789512-18789531 Msa0878180:intron 55.0%
! ACGGGTTTAGGACGAGTGAC+GGG - chr6_1:18789513-18789532 Msa0878180:intron 55.0%
TCAATGCAGGGACAGGGATG+CGG - chr6_1:18789783-18789802 Msa0878180:intron 55.0%
TATCTCAACTCCGTCCCCGA+CGG + chr6_1:18789824-18789843 None:intergenic 55.0%
CATCCCCGTTGGATATGGGT+AGG - chr6_1:18789852-18789871 Msa0878180:intron 55.0%
GAGAATTGGGTATGGGGACG+GGG - chr6_1:18789892-18789911 Msa0878180:intron 55.0%
ACAATGGGGCGAGATGGAGA+CGG + chr6_1:18789928-18789947 None:intergenic 55.0%
TGGCCCATTGTTCCTTTCGG+TGG - chr6_1:18790407-18790426 Msa0878180:intron 55.0%
GGCCCATTGTTCCTTTCGGT+GGG - chr6_1:18790408-18790427 Msa0878180:intron 55.0%
GGACCCACCGAAAGGAACAA+TGG + chr6_1:18790414-18790433 None:intergenic 55.0%
ACTCGTGATGTTGCCGCGAT+CGG + chr6_1:18791097-18791116 None:intergenic 55.0%
GGGGTTACATTAAGGGACGG+AGG + chr6_1:18791133-18791152 None:intergenic 55.0%
GATCAGTTATTCCGGGACGG+AGG - chr6_1:18791833-18791852 Msa0878180:intron 55.0%
! TTCCTTTCGGTGCAGGGAGA+CGG - chr6_1:18794401-18794420 Msa0878180:intron 55.0%
TGCAGCAGATTCGGCAGAAG+AGG + chr6_1:18794509-18794528 None:intergenic 55.0%
CGGTATGGATCACCGATCCT+TGG - chr6_1:18795039-18795058 Msa0878180:five_prime_UTR 55.0%
TTGCTGTCGGTGCAGGGAGA+CGG - chr6_1:18787214-18787233 Msa0878180:intron 60.0%
! GGTGCAGGGTAGCTCTGCAT+AGG + chr6_1:18787603-18787622 None:intergenic 60.0%
GCGGGTATACCCAAACCCGT+CGG - chr6_1:18789805-18789824 Msa0878180:intron 60.0%
CGGGTATACCCAAACCCGTC+GGG - chr6_1:18789806-18789825 Msa0878180:intron 60.0%
GGGTATACCCAAACCCGTCG+GGG - chr6_1:18789807-18789826 Msa0878180:intron 60.0%
ATACCCAAACCCGTCGGGGA+CGG - chr6_1:18789811-18789830 Msa0878180:intron 60.0%
ATCTCAACTCCGTCCCCGAC+GGG + chr6_1:18789823-18789842 None:intergenic 60.0%
ATTGGGTATGGGGACGGGGA+AGG - chr6_1:18789896-18789915 Msa0878180:intron 60.0%
CAATGGGGCGAGATGGAGAC+GGG + chr6_1:18789927-18789946 None:intergenic 60.0%
GGCATGACAATGGGGCGAGA+TGG + chr6_1:18789934-18789953 None:intergenic 60.0%
AGAGAAGGGGACCCACCGAA+AGG + chr6_1:18790422-18790441 None:intergenic 60.0%
AAGACAGCTGGGGTGGTGAC+AGG + chr6_1:18790555-18790574 None:intergenic 60.0%
GAGAGAGAAGACAGCTGGGG+TGG + chr6_1:18790562-18790581 None:intergenic 60.0%
TTCCGTCTCCCTGCACCGAA+AGG + chr6_1:18794406-18794425 None:intergenic 60.0%
ATGCAGGGACAGGGATGCGG+CGG - chr6_1:18789786-18789805 Msa0878180:intron 65.0%
! ACTCCGTCCCCGACGGGTTT+GGG + chr6_1:18789817-18789836 None:intergenic 65.0%
! AACTCCGTCCCCGACGGGTT+TGG + chr6_1:18789818-18789837 None:intergenic 65.0%
ACAGCTGGGGTGGTGACAGG+TGG + chr6_1:18790552-18790571 None:intergenic 65.0%
!! TGCAGTGGTGTCACGCGCCG+AGG - chr6_1:18787724-18787743 Msa0878180:intron 70.0%
!! GCAGTGGTGTCACGCGCCGA+GGG - chr6_1:18787725-18787744 Msa0878180:intron 70.0%
GTGTCACGCGCCGAGGGTTG+AGG - chr6_1:18787731-18787750 Msa0878180:intron 70.0%
TGCAGGGACAGGGATGCGGC+GGG - chr6_1:18789787-18789806 Msa0878180:intron 70.0%
GGGACGGAGGGAGTAGCCGA+AGG - chr6_1:18791400-18791419 Msa0878180:intron 70.0%
Chromosome Type Strat End Strand Name
chr6_1 gene 18785644 18795232 18785644 ID=Msa0878180;Name=Msa0878180
chr6_1 mRNA 18785644 18795232 18785644 ID=Msa0878180-mRNA-1;Parent=Msa0878180;Name=Msa0878180-mRNA-1;_AED=0.06;_eAED=0.06;_QI=216|0.4|0.33|1|0.4|0.33|6|209|685
chr6_1 exon 18785644 18786785 18785644 ID=Msa0878180-mRNA-1:exon:5084;Parent=Msa0878180-mRNA-1
chr6_1 exon 18787845 18787921 18787845 ID=Msa0878180-mRNA-1:exon:5083;Parent=Msa0878180-mRNA-1
chr6_1 exon 18792964 18793186 18792964 ID=Msa0878180-mRNA-1:exon:5082;Parent=Msa0878180-mRNA-1
chr6_1 exon 18793205 18793437 18793205 ID=Msa0878180-mRNA-1:exon:5081;Parent=Msa0878180-mRNA-1
chr6_1 exon 18793489 18793972 18793489 ID=Msa0878180-mRNA-1:exon:5080;Parent=Msa0878180-mRNA-1
chr6_1 exon 18794909 18795232 18794909 ID=Msa0878180-mRNA-1:exon:5079;Parent=Msa0878180-mRNA-1
chr6_1 five_prime_UTR 18795017 18795232 18795017 ID=Msa0878180-mRNA-1:five_prime_utr;Parent=Msa0878180-mRNA-1
chr6_1 CDS 18794909 18795016 18794909 ID=Msa0878180-mRNA-1:cds;Parent=Msa0878180-mRNA-1
chr6_1 CDS 18793489 18793972 18793489 ID=Msa0878180-mRNA-1:cds;Parent=Msa0878180-mRNA-1
chr6_1 CDS 18793205 18793437 18793205 ID=Msa0878180-mRNA-1:cds;Parent=Msa0878180-mRNA-1
chr6_1 CDS 18792964 18793186 18792964 ID=Msa0878180-mRNA-1:cds;Parent=Msa0878180-mRNA-1
chr6_1 CDS 18787845 18787921 18787845 ID=Msa0878180-mRNA-1:cds;Parent=Msa0878180-mRNA-1
chr6_1 CDS 18785853 18786785 18785853 ID=Msa0878180-mRNA-1:cds;Parent=Msa0878180-mRNA-1
chr6_1 three_prime_UTR 18785644 18785852 18785644 ID=Msa0878180-mRNA-1:three_prime_utr;Parent=Msa0878180-mRNA-1
Gene Sequence

>Msa0878180

ATGAATGGTGAAGGTGACATGTTTGTTAAAGATTCTTCTAGTTTCATGCTCTTTGGTAAGAAGATTCCGGTGAGTTCTTCTCAGATTCAGGCCAATTCTACAACCATGATTTCTTGCAGTAACTCAAAGCATAAAGGAAATGATATGCCTCATACTCAAAACATTGAGAAATCAAAGAATTCTTCTAATGAAGAAAATGAATCAAAAGTGAACACAAGCACTGTGGAAGATAATATGGAAACTAGCAGCACAGATCAAGACAAAGTCCTAAAGAAACCAGACAAGATTGTTCAATGTCCGAGATGCAAAAGTTTCGACACAAAATTTTGTTATTTCAACAACTACAACGTCAATCAACCTCGGCATTTCTGTCGGAGTTGTCACAGATATTGGACCAACGGTGGAACAATGAGAAATGTTGCTGTCGGTGCAGGGAGACGGAAGAACAAACACATAGCTTCTCAATATCGCCACATGATTGTAGTGTCCGATGGAATTCCGACCGCCAGTTTAGAAACCAACGACTCTTCTAGGTACCAACATGGCTCAAATGTTGAATCTGCTGCGGTTTTTAGGTGTTCAAATGATAATGGTTCAATGCTTAATCTTATGAACCACAAGAGAAATGTTGATGCAAGAGGTAACAATTGTAGAGAAAATGGAGAGGAAGAATCATCGTTATGTGTATCGTCTGTGACAAACGGTCATACTCGAGGAAACGAGTTATTCGAATCCGAACAGAATAGGTCTAAACCTATGCAGAGCTACCCTGCACCTTCATGGATAATTCCAATGAATCAAAGTTGGAACAATGTTACTTCTATGATGTGTAACCCTTATGGCATTGATCCTACTTCAATGCAGTGGTGTCACGCGCCGAGGGTTGAGGTTACAAACATTTTCACACCAAACATTGGCTTGCAATTTGTTCCTGCATCAAACAGGAATGGAACACCTTTGTATGGTAGTGGAAATGGAAATGTGTCCATAGGTTCAAATGGCTGCATTTCACCTTCTTCATCTACTACTAGTAATAGTTGTATCTCAGGTGACAATGACATGTGTGTTAAAGATTTTAGTATCATGCTCTTTGGAAAGAAGATTCAGGCCAACTCTTCAACCATGAATTCTTGCAGTAACTCAAAGCACAAAGGAAATGAAATGCCTCATATTCAAAACATTGAGAAATCAAAGAATTCTTCTAATGAAGAAAATGAATCAAAAGTTTACACAAGCACTGTGGAAGATAATATGGAAACTAGCAGCACAGATCAAGACAAAGTCCTCAAAAAACCGGACAAGATTGTTCAATGTCCAAGATGCAACAGTTTCAACACGAAATTTTGTTATTTCAATAACTACAATGTCAGTCAACCTCGGCATTTTTGTCGGAAGTGTCATAGATATTGGACTGCCGGTGGAACAATGAGAAACGTTCCTTTCGGTGCAGGGAGACGGAAGAACAAGCAGATAGCTTCTCAATATCGCCACATGATTGTAGCTTCCGGTGGAATTTCAACCTCAAATTTTGAAAGCAACGCCTCTTCTGCCGAATCTGCTGCAGTTTTCAGGTGCTCAAATAATAACGGTATTGTCCTAAAATTTGGTCCGGAAAATGCATATGTCCATGAATCTAACGATTCGAGGTTTAATCCTAGAAACTGCAAGAGAAATATTGATGCAAGTGCTAACAAATGTAGAGGAAATGGAGATGAAGAATCTTCATTATGTGTATCTTCTGTGACAAATGGTTATACTCGAGGAAACGAGTTAGCCGAATCTGAACATAATAGGTCAAAACTATTGCAGAGCTACCCTGCATCTTCATGGATGATTCCATTGAATCAAAGCTTGAACAATGTTCCTTCCATGGTTCAATCTTCAATGCAAATGTGTAACCCTTATGGCGTTGATCCTAGTTCAATGCAGTGGTGCCATATGCCGAACATCTTCAGACCGAACATTGGCTTGCAATTTGTTCCTGAATCATTTAGGAATGGATCAGTTTCAATAGGTTCAAATAATTGTATTTCGCCTTCTTCATCTACTACTAGCTAG
Protein sequence

>Msa0878180

MNGEGDMFVKDSSSFMLFGKKIPVSSSQIQANSTTMISCSNSKHKGNDMPHTQNIEKSKNSSNEENESKVNTSTVEDNMETSSTDQDKVLKKPDKIVQCPRCKSFDTKFCYFNNYNVNQPRHFCRSCHRYWTNGGTMRNVAVGAGRRKNKHIASQYRHMIVVSDGIPTASLETNDSSRYQHGSNVESAAVFRCSNDNGSMLNLMNHKRNVDARGNNCRENGEEESSLCVSSVTNGHTRGNELFESEQNRSKPMQSYPAPSWIIPMNQSWNNVTSMMCNPYGIDPTSMQWCHAPRVEVTNIFTPNIGLQFVPASNRNGTPLYGSGNGNVSIGSNGCISPSSSTTSNSCISGDNDMCVKDFSIMLFGKKIQANSSTMNSCSNSKHKGNEMPHIQNIEKSKNSSNEENESKVYTSTVEDNMETSSTDQDKVLKKPDKIVQCPRCNSFNTKFCYFNNYNVSQPRHFCRKCHRYWTAGGTMRNVPFGAGRRKNKQIASQYRHMIVASGGISTSNFESNASSAESAAVFRCSNNNGIVLKFGPENAYVHESNDSRFNPRNCKRNIDASANKCRGNGDEESSLCVSSVTNGYTRGNELAESEHNRSKLLQSYPASSWMIPLNQSLNNVPSMVQSSMQMCNPYGVDPSSMQWCHMPNIFRPNIGLQFVPESFRNGSVSIGSNNCISPSSSTTS*