AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0943940

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0943940 MtrunA17_Chr6g0460721 90.120 334 24 2 350 683 5 329 0.0 608
Msa0943940 MtrunA17_Chr6g0460721 69.972 363 56 7 1 344 1 329 4.92e-166 479
Msa0943940 MtrunA17_Chr6g0460731 84.874 357 16 5 1 334 1 342 0.0 600
Msa0943940 MtrunA17_Chr6g0460731 75.964 337 67 2 350 672 5 341 2.69e-176 506
Msa0943940 MtrunA17_Chr7g0254161 49.435 354 137 10 15 351 12 340 1.08e-97 307
Msa0943940 MtrunA17_Chr7g0254161 49.133 346 138 9 355 682 8 333 9.34e-91 289
Msa0943940 MtrunA17_Chr7g0217581 46.524 187 78 5 393 576 191 358 1.63e-41 159
Msa0943940 MtrunA17_Chr7g0217581 63.208 106 39 0 56 161 191 296 2.52e-38 150
Msa0943940 MtrunA17_Chr4g0042481 45.055 182 80 4 393 573 81 243 9.12e-40 152
Msa0943940 MtrunA17_Chr4g0042481 38.400 250 112 8 9 226 4 243 4.57e-39 150
Msa0943940 MtrunA17_Chr6g0453321 48.503 167 76 4 392 557 96 253 8.99e-39 150
Msa0943940 MtrunA17_Chr6g0453321 58.407 113 43 2 55 166 96 205 4.09e-37 145
Msa0943940 MtrunA17_Chr3g0092111 46.032 189 79 6 393 580 105 271 2.26e-38 148
Msa0943940 MtrunA17_Chr3g0092111 35.849 265 98 10 50 264 98 340 5.09e-35 139
Msa0943940 MtrunA17_Chr8g0355261 34.940 249 116 8 41 272 67 286 7.52e-35 137
Msa0943940 MtrunA17_Chr8g0355261 31.806 371 172 11 355 682 11 343 6.43e-34 135
Msa0943940 MtrunA17_Chr5g0417571 53.509 114 44 2 55 162 99 209 8.62e-33 129
Msa0943940 MtrunA17_Chr5g0417571 51.351 111 45 2 392 496 99 206 2.55e-29 119
Msa0943940 MtrunA17_Chr5g0417601 52.294 109 49 1 54 162 100 205 3.12e-29 120
Msa0943940 MtrunA17_Chr5g0417601 50.476 105 49 1 391 495 100 201 7.51e-26 110
Msa0943940 MtrunA17_Chr2g0283811 77.419 62 14 0 89 150 39 100 3.91e-29 113
Msa0943940 MtrunA17_Chr2g0283811 74.194 62 16 0 426 487 39 100 5.82e-28 110
Msa0943940 MtrunA17_Chr5g0417551 62.791 86 27 2 65 150 100 180 3.46e-28 117
Msa0943940 MtrunA17_Chr5g0417551 48.739 119 54 3 402 518 100 213 8.49e-26 109
Msa0943940 MtrunA17_Chr5g0417561 57.778 90 32 2 61 150 89 172 1.23e-27 115
Msa0943940 MtrunA17_Chr5g0417561 52.041 98 42 2 390 487 80 172 2.15e-24 105
Msa0943940 MtrunA17_Chr8g0346551 63.492 63 23 0 429 491 19 81 1.15e-24 104
Msa0943940 MtrunA17_Chr8g0346551 60.317 63 25 0 92 154 19 81 7.54e-23 99.0
Msa0943940 MtrunA17_Chr3g0127201 59.155 71 29 0 418 488 11 81 3.47e-24 103
Msa0943940 MtrunA17_Chr3g0127201 54.930 71 32 0 81 151 11 81 2.79e-22 97.8
Msa0943940 MtrunA17_Chr4g0047001 49.474 95 37 2 406 489 16 110 5.03e-24 104
Msa0943940 MtrunA17_Chr4g0047001 44.762 105 48 2 56 152 8 110 1.23e-22 100
Msa0943940 MtrunA17_Chr8g0374251 50.000 88 44 0 434 521 68 155 6.12e-24 103
Msa0943940 MtrunA17_Chr8g0374251 38.931 131 74 2 97 221 68 198 3.82e-23 101
Msa0943940 MtrunA17_Chr8g0367161 57.534 73 25 1 417 489 21 87 7.93e-24 103
Msa0943940 MtrunA17_Chr8g0367161 47.872 94 36 2 59 152 7 87 2.65e-23 101
Msa0943940 MtrunA17_Chr8g0374111 50.000 86 43 0 434 519 29 114 1.08e-23 100
Msa0943940 MtrunA17_Chr8g0374111 58.209 67 27 1 97 163 29 94 2.11e-21 93.6
Msa0943940 MtrunA17_Chr2g0326001 55.844 77 33 1 413 488 18 94 1.34e-23 101
Msa0943940 MtrunA17_Chr2g0326001 55.263 76 33 1 76 150 18 93 3.30e-22 97.4
Msa0943940 MtrunA17_Chr4g0010151 62.903 62 23 0 427 488 75 136 1.63e-23 102
Msa0943940 MtrunA17_Chr4g0010151 60.656 61 24 0 90 150 75 135 1.48e-22 100
Msa0943940 MtrunA17_Chr4g0030051 57.895 76 31 1 412 486 18 93 2.51e-23 100
Msa0943940 MtrunA17_Chr4g0030051 56.579 76 32 1 75 149 18 93 2.61e-22 97.8
Msa0943940 MtrunA17_Chr2g0308011 75.510 49 12 0 434 482 37 85 4.23e-23 98.2
Msa0943940 MtrunA17_Chr2g0308011 69.388 49 15 0 97 145 37 85 6.81e-21 91.7
Msa0943940 MtrunA17_Chr4g0031411 48.387 93 43 1 427 519 68 155 4.24e-23 101
Msa0943940 MtrunA17_Chr4g0031411 61.667 60 23 0 90 149 68 127 1.11e-21 97.1
Msa0943940 MtrunA17_Chr2g0328021 47.475 99 51 1 421 519 49 146 4.26e-23 100
Msa0943940 MtrunA17_Chr2g0328021 56.716 67 29 0 84 150 49 115 7.66e-22 96.3
Msa0943940 MtrunA17_Chr2g0282051 70.690 58 16 1 432 489 44 100 2.31e-22 97.4
Msa0943940 MtrunA17_Chr2g0282051 67.241 58 18 1 95 152 44 100 6.52e-21 93.2
Msa0943940 MtrunA17_Chr1g0188851 50.000 80 35 1 412 486 16 95 3.03e-22 97.8
Msa0943940 MtrunA17_Chr1g0188851 47.500 80 37 1 75 149 16 95 1.21e-20 92.8
Msa0943940 MtrunA17_Chr4g0047761 52.747 91 27 2 414 489 37 126 4.24e-22 97.8
Msa0943940 MtrunA17_Chr4g0047761 50.549 91 29 2 77 152 37 126 1.25e-20 93.6
Msa0943940 MtrunA17_Chr2g0282441 59.375 64 26 0 422 485 13 76 5.81e-22 97.8
Msa0943940 MtrunA17_Chr2g0282441 54.688 64 29 0 85 148 13 76 1.42e-20 93.6
Msa0943940 MtrunA17_Chr4g0061761 67.925 53 17 0 432 484 38 90 8.25e-22 97.1
Msa0943940 MtrunA17_Chr4g0061761 64.151 53 19 0 95 147 38 90 2.72e-20 92.4
Msa0943940 MtrunA17_Chr7g0237921 55.556 72 30 1 419 488 59 130 8.42e-22 97.4
Msa0943940 MtrunA17_Chr7g0237921 53.521 71 31 1 82 150 59 129 1.48e-20 94.0
Msa0943940 MtrunA17_Chr8g0341671 69.231 52 16 0 434 485 20 71 1.12e-21 94.0
Msa0943940 MtrunA17_Chr8g0341671 65.385 52 18 0 97 148 20 71 1.31e-20 90.9
Msa0943940 MtrunA17_Chr7g0223311 70.909 55 15 1 435 488 78 132 5.90e-21 95.5
Msa0943940 MtrunA17_Chr7g0223311 67.308 52 17 0 98 149 78 129 3.78e-20 92.8
Msa0943940 MtrunA17_Chr3g0126201 56.164 73 30 1 418 488 33 105 8.40e-21 94.4
Msa0943940 MtrunA17_Chr3g0126201 54.167 72 31 1 81 150 33 104 1.20e-19 90.9
Msa0943940 MtrunA17_Chr5g0411951 63.636 55 20 0 430 484 39 93 8.49e-21 94.4
Msa0943940 MtrunA17_Chr5g0411951 60.000 55 22 0 93 147 39 93 1.60e-19 90.5
Msa0943940 MtrunA17_Chr2g0282511 71.429 49 14 0 434 482 45 93 1.42e-20 93.2
Msa0943940 MtrunA17_Chr2g0282511 67.347 49 16 0 97 145 45 93 2.89e-19 89.4
Msa0943940 MtrunA17_Chr1g0177251 66.038 53 18 0 436 488 14 66 3.89e-20 91.3
Msa0943940 MtrunA17_Chr1g0177251 65.385 52 18 0 99 150 14 65 5.00e-19 88.2
Msa0943940 MtrunA17_Chr3g0117601 58.065 62 25 1 424 484 50 111 6.43e-20 91.7
Msa0943940 MtrunA17_Chr3g0117601 56.452 62 26 1 87 147 50 111 5.52e-19 89.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0943940 AT3G47500.1 56.667 120 46 3 53 172 71 184 2.14e-37 145
Msa0943940 AT3G47500.1 47.368 152 62 3 390 541 71 204 7.70e-36 141
Msa0943940 AT5G39660.3 57.391 115 36 2 400 501 92 206 2.53e-35 140
Msa0943940 AT5G39660.3 56.140 114 37 2 63 163 92 205 6.18e-34 135
Msa0943940 AT5G39660.1 57.391 115 36 2 400 501 92 206 2.53e-35 140
Msa0943940 AT5G39660.1 56.140 114 37 2 63 163 92 205 6.18e-34 135
Msa0943940 AT5G39660.2 57.391 115 36 2 400 501 92 206 2.53e-35 140
Msa0943940 AT5G39660.2 56.140 114 37 2 63 163 92 205 6.18e-34 135
Msa0943940 AT5G62430.1 52.137 117 49 2 64 178 26 137 2.16e-33 130
Msa0943940 AT5G62430.1 63.043 92 29 2 413 499 30 121 1.66e-32 128
Msa0943940 AT1G26790.1 44.382 178 78 4 354 510 10 187 3.83e-33 131
Msa0943940 AT1G26790.1 55.963 109 44 2 55 159 67 175 3.72e-32 129
Msa0943940 AT2G34140.1 43.046 151 64 3 71 199 19 169 1.78e-32 124
Msa0943940 AT2G34140.1 46.512 129 43 2 359 487 9 111 3.49e-31 120
Msa0943940 AT1G69570.1 52.632 114 52 1 422 533 120 233 1.34e-30 125
Msa0943940 AT1G69570.1 62.500 80 30 0 85 164 120 199 1.61e-29 121
Msa0943940 AT1G29160.1 78.333 60 13 0 91 150 56 115 5.97e-30 117
Msa0943940 AT1G29160.1 76.667 60 14 0 428 487 56 115 1.97e-29 115
Msa0943940 AT3G55370.1 57.143 70 30 0 430 499 72 141 5.76e-24 103
Msa0943940 AT3G55370.1 57.143 70 30 0 93 162 72 141 1.62e-23 102
Msa0943940 AT3G55370.2 57.143 70 30 0 430 499 72 141 7.36e-24 104
Msa0943940 AT3G55370.2 57.143 70 30 0 93 162 72 141 2.00e-23 102
Msa0943940 AT3G55370.3 57.143 70 30 0 430 499 117 186 1.36e-23 103
Msa0943940 AT3G55370.3 57.143 70 30 0 93 162 117 186 3.99e-23 102
Msa0943940 AT2G28810.2 41.414 99 55 1 390 485 30 128 3.37e-23 101
Msa0943940 AT2G28810.2 40.000 100 57 1 52 148 29 128 3.31e-22 98.6
Msa0943940 AT5G60200.1 37.086 151 80 2 428 563 49 199 3.63e-23 99.8
Msa0943940 AT5G60200.1 61.667 60 23 0 91 150 49 108 4.87e-22 96.7
Msa0943940 AT2G28810.1 41.414 99 55 1 390 485 47 145 4.86e-23 101
Msa0943940 AT2G28810.1 40.000 100 57 1 52 148 46 145 4.00e-22 98.6
Msa0943940 AT1G51700.1 55.714 70 29 1 416 485 17 84 5.98e-23 97.4
Msa0943940 AT1G51700.1 52.857 70 31 1 79 148 17 84 2.29e-21 92.8
Msa0943940 AT3G21270.1 71.698 53 15 0 434 486 29 81 6.31e-23 97.8
Msa0943940 AT3G21270.1 69.811 53 16 0 97 149 29 81 6.57e-22 94.7
Msa0943940 AT5G60850.1 70.909 55 16 0 434 488 51 105 8.86e-23 100
Msa0943940 AT5G60850.1 66.667 54 18 0 97 150 51 104 1.33e-20 93.6
Msa0943940 AT4G24060.1 60.938 64 25 0 425 488 44 107 1.32e-22 100
Msa0943940 AT4G24060.1 58.730 63 26 0 88 150 44 106 9.13e-21 94.7
Msa0943940 AT3G61850.2 63.333 60 22 0 429 488 57 116 1.54e-22 98.6
Msa0943940 AT3G61850.2 61.017 59 23 0 92 150 57 115 8.61e-21 93.6
Msa0943940 AT3G61850.3 63.333 60 22 0 429 488 57 116 1.54e-22 98.6
Msa0943940 AT3G61850.3 61.017 59 23 0 92 150 57 115 8.61e-21 93.6
Msa0943940 AT2G37590.1 62.712 59 22 0 430 488 85 143 2.00e-22 99.4
Msa0943940 AT2G37590.1 62.069 58 22 0 93 150 85 142 1.24e-21 97.1
Msa0943940 AT3G61850.1 63.333 60 22 0 429 488 69 128 2.04e-22 98.6
Msa0943940 AT3G61850.1 61.017 59 23 0 92 150 69 127 1.11e-20 93.6
Msa0943940 AT1G28310.1 67.857 56 18 0 434 489 27 82 2.25e-22 99.0
Msa0943940 AT1G28310.1 64.286 56 20 0 97 152 27 82 8.26e-21 94.4
Msa0943940 AT3G61850.5 63.333 60 22 0 429 488 57 116 3.12e-22 98.6
Msa0943940 AT3G61850.5 61.017 59 23 0 92 150 57 115 1.59e-20 93.6
Msa0943940 AT1G28310.2 67.857 56 18 0 434 489 51 106 3.17e-22 99.0
Msa0943940 AT1G28310.2 64.286 56 20 0 97 152 51 106 1.02e-20 94.4
Msa0943940 AT3G45610.1 58.065 62 26 0 430 491 36 97 3.52e-22 96.7
Msa0943940 AT3G45610.1 45.055 91 42 2 93 175 36 126 1.51e-21 94.7
Msa0943940 AT3G61850.4 63.333 60 22 0 429 488 69 128 3.53e-22 98.6
Msa0943940 AT3G61850.4 61.017 59 23 0 92 150 69 127 1.77e-20 93.6
Msa0943940 AT5G65590.1 69.091 55 17 0 434 488 41 95 4.95e-22 97.8
Msa0943940 AT5G65590.1 64.815 54 19 0 97 150 41 94 3.84e-20 92.4
Msa0943940 AT1G07640.1 67.857 56 17 1 434 488 21 76 9.13e-22 96.3
Msa0943940 AT1G07640.1 66.038 53 18 0 97 149 21 73 1.33e-20 92.8
Msa0943940 AT3G50410.1 67.273 55 18 0 434 488 30 84 9.15e-22 95.9
Msa0943940 AT3G50410.1 66.038 53 18 0 97 149 30 82 1.45e-20 92.4
Msa0943940 AT5G66940.1 41.322 121 58 3 421 540 26 134 1.10e-21 94.7
Msa0943940 AT5G66940.1 53.425 73 27 1 84 156 26 91 2.67e-20 90.9
Msa0943940 AT1G07640.2 67.857 56 17 1 434 488 77 132 1.63e-21 96.7
Msa0943940 AT1G07640.2 67.273 55 17 1 97 150 77 131 2.23e-20 93.6
Msa0943940 AT4G00940.1 54.167 72 29 1 422 489 52 123 1.78e-21 95.9
Msa0943940 AT4G00940.1 52.778 72 30 1 85 152 52 123 1.08e-19 90.5
Msa0943940 AT4G00940.3 54.167 72 29 1 422 489 52 123 1.78e-21 95.9
Msa0943940 AT4G00940.3 52.778 72 30 1 85 152 52 123 1.08e-19 90.5
Msa0943940 AT4G00940.2 54.167 72 29 1 422 489 52 123 1.78e-21 95.9
Msa0943940 AT4G00940.2 52.778 72 30 1 85 152 52 123 1.08e-19 90.5
Msa0943940 AT1G07640.3 67.857 56 17 1 434 488 85 140 2.21e-21 96.7
Msa0943940 AT1G07640.3 67.273 55 17 1 97 150 85 139 2.82e-20 93.2
Msa0943940 AT5G02460.1 59.677 62 25 0 427 488 88 149 2.76e-21 97.1
Msa0943940 AT5G02460.1 59.016 61 25 0 90 150 88 148 2.75e-20 94.4
Msa0943940 AT2G28510.1 67.857 56 18 0 436 491 50 105 4.19e-21 94.7
Msa0943940 AT2G28510.1 66.071 56 19 0 99 154 50 105 2.02e-20 92.8
Msa0943940 AT1G64620.1 58.333 60 25 0 423 482 38 97 5.03e-21 95.9
Msa0943940 AT1G64620.1 53.333 60 28 0 86 145 38 97 1.41e-18 88.2
Msa0943940 AT4G38000.1 60.656 61 23 1 433 492 40 100 1.16e-20 92.4
Msa0943940 AT4G38000.1 49.367 79 38 2 96 172 40 118 5.42e-19 87.4
Msa0943940 AT4G21050.1 50.000 78 37 1 414 489 2 79 1.64e-20 90.9
Msa0943940 AT4G21050.1 47.436 78 39 1 77 152 2 79 4.54e-19 86.7
Msa0943940 AT3G52440.1 46.512 86 46 0 436 521 27 112 3.63e-20 90.9
Msa0943940 AT3G52440.1 63.462 52 19 0 99 150 27 78 8.88e-19 87.0
Msa0943940 AT3G52440.2 46.512 86 46 0 436 521 46 131 6.51e-20 90.5
Msa0943940 AT3G52440.2 63.462 52 19 0 99 150 46 97 1.37e-18 86.7
Msa0943940 AT1G47655.1 65.306 49 17 0 434 482 29 77 1.40e-19 88.2
Msa0943940 AT1G47655.1 65.306 49 17 0 97 145 29 77 1.22e-18 85.5
Msa0943940 AT2G46590.1 62.264 53 20 0 429 481 63 115 1.48e-19 91.3
Msa0943940 AT2G46590.1 58.491 53 22 0 92 144 63 115 7.39e-18 86.3
Msa0943940 AT1G21340.1 68.000 50 16 0 436 485 40 89 1.60e-19 89.4
Msa0943940 AT1G21340.1 42.553 94 53 1 99 191 40 133 2.11e-19 89.0
Msa0943940 AT2G46590.2 62.264 53 20 0 429 481 75 127 1.69e-19 91.3
Msa0943940 AT2G46590.2 58.491 53 22 0 92 144 75 127 8.56e-18 86.3
Msa0943940 AT5G62940.1 57.812 64 26 1 422 484 60 123 2.42e-19 90.9
Msa0943940 AT5G62940.1 39.450 109 50 2 55 147 15 123 3.52e-19 90.5
Msa0943940 AT4G21040.1 56.140 57 25 0 436 492 27 83 4.49e-16 78.6
Msa0943940 AT4G21040.1 48.611 72 37 0 99 170 27 98 2.61e-15 76.3
Msa0943940 AT4G21080.1 54.386 57 26 0 436 492 27 83 1.20e-15 77.8
Msa0943940 AT4G21080.1 50.877 57 28 0 99 155 27 83 3.97e-14 73.2

Find 143 sgRNAs with CRISPR-Local

Find 534 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATATTTCTCTTGTGGTTTCT+AGG 0.197262 6_3:+20225354 None:intergenic
CAATCTTGTCTGGTTTCTTT+AGG 0.212759 6_3:+20232610 None:intergenic
AATGGCATTGTCCTAAAATT+TGG 0.232669 6_3:-20225423 Msa0943940:CDS
TAGAAACCAACGACTCTTCT+AGG 0.239536 6_3:-20232365 Msa0943940:CDS
AATTTGTTCCTGAATCATTT+AGG 0.243494 6_3:-20225035 Msa0943940:CDS
TTGGAACAATGTTACTTCTA+TGG 0.251370 6_3:-20232022 Msa0943940:intron
GTTAATAATTGTAGAGAAAA+TGG 0.253304 6_3:-20225321 Msa0943940:CDS
GGTAACAATTGTAGAGAAAA+TGG 0.277928 6_3:-20232186 Msa0943940:CDS
GGTGAGTTCTTCTCAGATTC+AGG 0.283209 6_3:-20233749 Msa0943940:CDS
TCTTCTAGTTTCATGCTCTT+TGG 0.299226 6_3:-20233784 Msa0943940:CDS
GTCGGAAGTGTCATAGATAT+TGG 0.311203 6_3:-20225620 Msa0943940:CDS
TTTAGGTGTTCAAATGATAA+TGG 0.318424 6_3:-20232306 Msa0943940:intron
GTCGGAGTTGTCACAGATAT+TGG 0.320960 6_3:-20232506 Msa0943940:CDS
TTCAGGTGCTCAAATAATAA+TGG 0.321797 6_3:-20225441 Msa0943940:CDS
ACATCGAATCGTTAGATTCA+TGG 0.328881 6_3:+20225382 None:intergenic
GATCCATTCCTAAATGATTC+AGG 0.331263 6_3:+20225027 None:intergenic
TTGTTCCAACTTTGATTCAT+TGG 0.340788 6_3:+20232036 None:intergenic
CTAGCATAGCCGTACAATAT+TGG 0.345573 6_3:-20224832 Msa0943940:three_prime_UTR
AAGCACTGTGGAAGATAATA+TGG 0.348391 6_3:-20225775 Msa0943940:CDS
AAGCACTGTGGAAGATAATA+TGG 0.348391 6_3:-20232661 Msa0943940:CDS
AATGAATGAGCACAAGAAAT+AGG 0.348769 6_3:+20224765 None:intergenic
TTGTTCAAGCTTTGATTCAA+TGG 0.349711 6_3:+20225171 None:intergenic
TTGATTGACGGCACTAATCT+TGG 0.354704 6_3:-20224891 Msa0943940:three_prime_UTR
AATTACCATGGTTGTAGAAT+TGG 0.358075 6_3:+20233726 None:intergenic
CCTTTGTATGGTAGTGGAAA+TGG 0.370217 6_3:-20231853 Msa0943940:CDS
ATGCAAATGTGTAACCCTTA+TGG 0.378243 6_3:-20225123 Msa0943940:CDS
ATGCAGATGTGTAACCCTTA+TGG 0.380909 6_3:-20231988 Msa0943940:intron
AGAGTCGTTGGTTTCTAAAC+TGG 0.381811 6_3:+20232371 None:intergenic
AGGAATGGATCAGTTTCAAT+AGG 0.385406 6_3:-20225015 Msa0943940:CDS
GTCTTAAGATGTTCGGCATA+TGG 0.386561 6_3:+20225073 None:intergenic
GCTCTTTGGAAAGAAGATTC+AGG 0.390549 6_3:-20227034 Msa0943940:CDS
AGAGCTACCTTGCATCTTCA+TGG 0.392921 6_3:-20225200 Msa0943940:CDS
TATCTGAATCCGAACATAAT+AGG 0.400322 6_3:-20225236 Msa0943940:CDS
CCGTACAATATTGGTCTGTA+AGG 0.407774 6_3:-20224823 Msa0943940:three_prime_UTR
GGACATTGAACAATCTTGTC+TGG 0.411323 6_3:+20232600 None:intergenic
TCTTGTGCTCATTCATTTCA+AGG 0.411689 6_3:-20224759 Msa0943940:three_prime_UTR
ACCATCTTAAAATTTAAGTT+CGG 0.411931 6_3:-20224856 Msa0943940:three_prime_UTR
ACAAATTGCAAGCCAATGTT+TGG 0.418330 6_3:+20231901 None:intergenic
GCTCTTTGGTAAGAAGATTC+CGG 0.421687 6_3:-20233770 Msa0943940:CDS
TGCAGTAACTCAAAGCATAA+AGG 0.422749 6_3:-20232762 Msa0943940:CDS
CCTGAAAACCACAGCAGATT+CGG 0.430545 6_3:+20225458 None:intergenic
GAACTAGGATCAACGCCATA+AGG 0.439532 6_3:+20225108 None:intergenic
AGAAACGTTCCTTTCGGTGC+AGG 0.439748 6_3:-20225579 Msa0943940:CDS
GTGTCACGCGCCGAGGGTTG+AGG 0.440646 6_3:-20231941 Msa0943940:CDS
GACGTTACTTTCAGAATTTG+AGG 0.441263 6_3:+20225488 None:intergenic
AGGTTTAGACCTATTCTGTT+CGG 0.445629 6_3:+20232092 None:intergenic
AATGCAACCATTTGAACCTA+TGG 0.446070 6_3:+20231822 None:intergenic
AGAGCTACCCTGCACCTTCA+TGG 0.447832 6_3:-20232065 Msa0943940:CDS
ACTAGTAATAGTTGTATCTC+AGG 0.449615 6_3:-20231781 Msa0943940:intron
CTTGAACAATGTTCCTTCCA+TGG 0.451475 6_3:-20225157 Msa0943940:CDS
CGCCACATGATTGTAGCTTC+CGG 0.453024 6_3:-20225522 Msa0943940:CDS
ATGTTCGGTCTTAAGATGTT+CGG 0.459470 6_3:+20225066 None:intergenic
AATTTGTTCCTGCATCAAAC+AGG 0.461385 6_3:-20231885 Msa0943940:CDS
AGAAATGTTGCTGTCGGTGC+AGG 0.467099 6_3:-20232465 Msa0943940:CDS
GTTCCATTCCTGTTTGATGC+AGG 0.467432 6_3:+20231877 None:intergenic
GGACATTGAACAATCTTGTC+CGG 0.468204 6_3:+20225714 None:intergenic
TTCATTGGAATTATCCATGA+AGG 0.472286 6_3:+20232051 None:intergenic
TTGCATCAACATTTCTCTTG+TGG 0.474797 6_3:+20232211 None:intergenic
TTCCTTTCGGTGCAGGGAGA+CGG 0.475764 6_3:-20225572 Msa0943940:CDS
ACTTACCATGGTTGAAGAGT+TGG 0.478391 6_3:+20227011 None:intergenic
TCATAGTTGTTGCTCCGGTA+TGG 0.482344 6_3:-20224949 Msa0943940:three_prime_UTR
TATTCGAATCCGAACAGAAT+AGG 0.487381 6_3:-20232101 Msa0943940:CDS
CATTGTCCTAAAATTTGGTC+CGG 0.488780 6_3:-20225418 Msa0943940:CDS
GAAGTAGGATCAATGCCATA+AGG 0.489322 6_3:+20231973 None:intergenic
TATAGAAAGAGAAAAGTGTT+TGG 0.490803 6_3:+20233942 None:intergenic
GGAATTATCCATGAAGGTGC+AGG 0.491213 6_3:+20232057 None:intergenic
CGTACAATATTGGTCTGTAA+GGG 0.493479 6_3:-20224822 Msa0943940:three_prime_UTR
GGAACACCTTTGTATGGTAG+TGG 0.497692 6_3:-20231859 Msa0943940:CDS
TTGCTGTCGGTGCAGGGAGA+CGG 0.499466 6_3:-20232458 Msa0943940:CDS
TAATTCCAATGAATCAAAGT+TGG 0.500347 6_3:-20232041 Msa0943940:CDS
TGTGTATCTTCTGTGACAAA+TGG 0.500907 6_3:-20225279 Msa0943940:CDS
AACGTTTCTCATTGTTCCAC+CGG 0.503306 6_3:+20225593 None:intergenic
ACAATGAGAAACGTTCCTTT+CGG 0.504607 6_3:-20225585 Msa0943940:CDS
CTTGTGCTCATTCATTTCAA+GGG 0.508744 6_3:-20224758 Msa0943940:three_prime_UTR
TTGCATCAATATTTCTCTTG+TGG 0.508819 6_3:+20225346 None:intergenic
ATTTCTCATTGTTCCACCGT+TGG 0.510921 6_3:+20232482 None:intergenic
GCAGTGGTGTCACGCGCCGA+GGG 0.511659 6_3:-20231947 Msa0943940:CDS
ACAAATTGCAAGCCAATGTT+CGG 0.513658 6_3:+20225051 None:intergenic
GTTCCTGAATCATTTAGGAA+TGG 0.513930 6_3:-20225030 Msa0943940:CDS
CAAGGATCGGTGATCCATAC+CGG 0.519624 6_3:+20224935 None:intergenic
TGGCACCACTGCATTGAACT+AGG 0.522209 6_3:+20225093 None:intergenic
GTGTTGAAACTGTTGCATCT+TGG 0.528822 6_3:+20225693 None:intergenic
CAATATTGTACGGCTATGCT+AGG 0.529159 6_3:+20224833 None:intergenic
GAAACGTTCCTTTCGGTGCA+GGG 0.532355 6_3:-20225578 Msa0943940:CDS
AGGAATGGAACACCTTTGTA+TGG 0.533609 6_3:-20231865 Msa0943940:CDS
TTGGTACCTAGAAGAGTCGT+TGG 0.535519 6_3:+20232359 None:intergenic
TGTCATAGATATTGGACTGC+CGG 0.542196 6_3:-20225612 Msa0943940:CDS
CTCTTCTACCGAATCTGCTG+TGG 0.544865 6_3:-20225466 Msa0943940:CDS
ATTCAACATTTGAGCCATGT+TGG 0.548791 6_3:+20232340 None:intergenic
AATGTGTCCATAGGTTCAAA+TGG 0.549266 6_3:-20231829 Msa0943940:CDS
GTTCCTGCATCAAACAGGAA+TGG 0.554691 6_3:-20231880 Msa0943940:CDS
AAGAGAAATGTTGATGCAAG+TGG 0.555436 6_3:-20232207 Msa0943940:CDS
TTCCGTCTCCCTGCACCGAA+AGG 0.555844 6_3:+20225570 None:intergenic
CCTTACAGACCAATATTGTA+CGG 0.557287 6_3:+20224823 None:intergenic
GCTAGTCATAGTTGTTGCTC+CGG 0.559422 6_3:-20224954 Msa0943940:exon
AAGTAGGATCAATGCCATAA+GGG 0.561604 6_3:+20231974 None:intergenic
ATTGAAGATTGAACCATGGA+AGG 0.561855 6_3:+20225144 None:intergenic
AACTAGGATCAACGCCATAA+GGG 0.563985 6_3:+20225109 None:intergenic
TGTCACAGAAGATACACATA+AGG 0.564721 6_3:+20225284 None:intergenic
GGAAATGGAAATGTGTCCAT+AGG 0.578755 6_3:-20231838 Msa0943940:CDS
TTGGTTTCTAAACTGGCGGT+CGG 0.586129 6_3:+20232378 None:intergenic
TGACACCACTGCATTGAAGT+AGG 0.587068 6_3:+20231958 None:intergenic
ATCAACCTCGGCATTTCTGT+CGG 0.588083 6_3:-20232524 Msa0943940:CDS
TAGCTAGTAGTAGATGAAGA+AGG 0.592040 6_3:+20224973 None:intergenic
ATTTGAGGTTGAAATTCCAC+CGG 0.595342 6_3:+20225503 None:intergenic
TCAGGCCAATTCTACAACCA+TGG 0.595350 6_3:-20233731 Msa0943940:intron
GGTGCAGGGTAGCTCTGCAT+AGG 0.600830 6_3:+20232072 None:intergenic
CACATGATTGTAGTGTCCGA+TGG 0.602575 6_3:-20232405 Msa0943940:CDS
GTCGTTGGTTTCTAAACTGG+CGG 0.606694 6_3:+20232374 None:intergenic
ATGTTTGTAACCTCAACCCT+CGG 0.610211 6_3:+20231931 None:intergenic
CCATTTCCACTACCATACAA+AGG 0.611279 6_3:+20231853 None:intergenic
CTCAAATGTTGAATCTGCTG+CGG 0.611992 6_3:-20232331 Msa0943940:CDS
TTACTAGTAGTAGATGAAGA+AGG 0.612171 6_3:+20231796 None:intergenic
GAATCATCCATGAAGATGCA+AGG 0.612962 6_3:+20225193 None:intergenic
TCAGGCCAACTCTTCAACCA+TGG 0.613442 6_3:-20227016 Msa0943940:intron
AACATCTTAAGACCGAACAT+TGG 0.614479 6_3:-20225063 Msa0943940:CDS
GTGACAAATGGTTATACTCG+AGG 0.618192 6_3:-20225267 Msa0943940:CDS
CATAGATATTGGACTGCCGG+TGG 0.627706 6_3:-20225609 Msa0943940:CDS
CACAGATATTGGACCAACGG+TGG 0.629754 6_3:-20232495 Msa0943940:CDS
TGAATCTGAGAAGAACTCAC+CGG 0.630634 6_3:+20233751 None:intergenic
GAATTATCCATGAAGGTGCA+GGG 0.632904 6_3:+20232058 None:intergenic
GAGCACAAGAAATAGGTGCA+TGG 0.635430 6_3:+20224772 None:intergenic
TGTCACAGATATTGGACCAA+CGG 0.638912 6_3:-20232498 Msa0943940:CDS
TGTGTATCGTCTGTGACGAA+CGG 0.639484 6_3:-20232144 Msa0943940:CDS
GTACAATATTGGTCTGTAAG+GGG 0.642274 6_3:-20224821 Msa0943940:three_prime_UTR
TTGATCCTAGTTCAATGCAG+TGG 0.644085 6_3:-20225098 Msa0943940:CDS
TTGCATTGAAGATTGAACCA+TGG 0.644235 6_3:+20225140 None:intergenic
CACATGATTGTAGCTTCCGG+TGG 0.649268 6_3:-20225519 Msa0943940:CDS
ACTGGCGGTCGGAATTCCAT+CGG 0.649455 6_3:+20232389 None:intergenic
TTGATCCTACTTCAATGCAG+TGG 0.649462 6_3:-20231963 Msa0943940:CDS
TGCAGTAACTCAAAGCACAA+AGG 0.653363 6_3:-20225876 Msa0943940:CDS
ACTACAATGTCAGTCAACCT+CGG 0.657312 6_3:-20225650 Msa0943940:CDS
CACCGGAAGCTACAATCATG+TGG 0.658948 6_3:+20225520 None:intergenic
GAAATGTTGCTGTCGGTGCA+GGG 0.663844 6_3:-20232464 Msa0943940:CDS
GTGACGAACGGTCATACTCG+AGG 0.665250 6_3:-20232132 Msa0943940:CDS
CAACTCCGACAGAAATGCCG+AGG 0.680790 6_3:+20232519 None:intergenic
ACTACAACGTCAATCAACCT+CGG 0.682406 6_3:-20232536 Msa0943940:CDS
GACTCTTCTAGGTACCAACA+TGG 0.687547 6_3:-20232354 Msa0943940:CDS
ACAATGAGAAATGTTGCTGT+CGG 0.691886 6_3:-20232471 Msa0943940:CDS
CATCGGACACTACAATCATG+TGG 0.695881 6_3:+20232406 None:intergenic
CAATTGTAGAGAAAATGGAG+AGG 0.705347 6_3:-20232181 Msa0943940:CDS
AAAAGTGAACACAAGCACTG+TGG 0.727270 6_3:-20232673 Msa0943940:CDS
AAAAGTTTACACAAGCACTG+TGG 0.736976 6_3:-20225787 Msa0943940:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTTATTTTTGTTGTAT+TGG - chr6_3:20225104-20225123 Msa0943940:CDS 10.0%
!!! TTTTTTATTTTTGTTGTATT+GGG - chr6_3:20225105-20225124 Msa0943940:CDS 10.0%
!! TAAAGTAATTTCTTATATTT+GGG + chr6_3:20228476-20228495 None:intergenic 10.0%
!! ATAAAGTAATTTCTTATATT+TGG + chr6_3:20228477-20228496 None:intergenic 10.0%
!! ATTAAAAAAATTATTCAATG+CGG - chr6_3:20228665-20228684 Msa0943940:intron 10.0%
!!! TTTCATAATGTAATTTTTTT+TGG + chr6_3:20228907-20228926 None:intergenic 10.0%
!! AAAAAAAATTACATTATGAA+AGG - chr6_3:20228906-20228925 Msa0943940:intron 10.0%
!!! ATAAAGATCTATTTTAATTT+TGG - chr6_3:20228959-20228978 Msa0943940:intron 10.0%
!!! TAAAGATCTATTTTAATTTT+GGG - chr6_3:20228960-20228979 Msa0943940:intron 10.0%
!! ACAAATTAATAGTATTAATT+AGG - chr6_3:20230188-20230207 Msa0943940:intron 10.0%
!! CAAATTAATAGTATTAATTA+GGG - chr6_3:20230189-20230208 Msa0943940:intron 10.0%
!! AAATTAATAGTATTAATTAG+GGG - chr6_3:20230190-20230209 Msa0943940:intron 10.0%
!! TAAGAAAAATGTAAAATAAA+GGG + chr6_3:20231159-20231178 None:intergenic 10.0%
!! TTAAGAAAAATGTAAAATAA+AGG + chr6_3:20231160-20231179 None:intergenic 10.0%
!!! TAAAAAAAAGCATTAATTAA+AGG - chr6_3:20231380-20231399 Msa0943940:intron 10.0%
!!! TATTTTTTAACACATTTATT+TGG - chr6_3:20231889-20231908 Msa0943940:CDS 10.0%
!!! AATTTCTTAATTCTTTTTTT+TGG - chr6_3:20232289-20232308 Msa0943940:intron 10.0%
!! TAAAAAAACAACATAAACAA+TGG + chr6_3:20225067-20225086 None:intergenic 15.0%
!! ATAAAAAAAACTCAAGAATA+TGG - chr6_3:20225209-20225228 Msa0943940:CDS 15.0%
!!! TAAATTTGTTTAATTTTGCT+TGG - chr6_3:20225504-20225523 Msa0943940:CDS 15.0%
!! TTTCATAAATATAACATGAT+TGG - chr6_3:20225584-20225603 Msa0943940:CDS 15.0%
!!! CATATAACATTATTTGAAAT+CGG - chr6_3:20227264-20227283 Msa0943940:intron 15.0%
!!! TTTTAAAAAATATTGACCAA+CGG - chr6_3:20228090-20228109 Msa0943940:intron 15.0%
!! TTAAAAAAATTATTCAATGC+GGG - chr6_3:20228666-20228685 Msa0943940:intron 15.0%
!!! AATTTTATGAGAATTAAGTA+TGG - chr6_3:20228780-20228799 Msa0943940:intron 15.0%
!!! ATTTTATGAGAATTAAGTAT+GGG - chr6_3:20228781-20228800 Msa0943940:intron 15.0%
!! AATAAATATAGTTGAATGAA+TGG - chr6_3:20228932-20228951 Msa0943940:intron 15.0%
!!! AAGATATAGTTTCTTTTTTT+GGG + chr6_3:20229024-20229043 None:intergenic 15.0%
!!! AAAAGTATCAATTTTTGTAT+TGG + chr6_3:20229092-20229111 None:intergenic 15.0%
!! AGATTATCGTAAAAAAATTA+CGG + chr6_3:20229542-20229561 None:intergenic 15.0%
!!! ATTTTTTAAGTTCATTGAAT+AGG - chr6_3:20229852-20229871 Msa0943940:intron 15.0%
!!! TAAGAAAAAACAACTTTTTA+GGG + chr6_3:20229928-20229947 None:intergenic 15.0%
!!! ATAAGAAAAAACAACTTTTT+AGG + chr6_3:20229929-20229948 None:intergenic 15.0%
!! AAGGAAAAAAAAGATTTAAT+TGG - chr6_3:20230366-20230385 Msa0943940:intron 15.0%
!! CAATAAAAAAGTTATTATCA+TGG - chr6_3:20230538-20230557 Msa0943940:intron 15.0%
!! ACTTATTTAAATTGACATAA+AGG - chr6_3:20230751-20230770 Msa0943940:intron 15.0%
!!! TTTTTTTTTCTTCATTTTAG+AGG + chr6_3:20230824-20230843 None:intergenic 15.0%
!! AAAATGGAATATATTGAATT+GGG + chr6_3:20231135-20231154 None:intergenic 15.0%
!! AAGAAAAATGTAAAATAAAG+GGG + chr6_3:20231158-20231177 None:intergenic 15.0%
!! AAAGATAAAGTAAAAAGAAA+AGG - chr6_3:20231337-20231356 Msa0943940:intron 15.0%
!!! AATTTTCAAAGTCTTTTTTT+TGG - chr6_3:20231462-20231481 Msa0943940:intron 15.0%
!! TTCTAAATTAACATGAAAAA+TGG + chr6_3:20231774-20231793 None:intergenic 15.0%
!!! TAATACTCTTCAAATTTTAA+AGG + chr6_3:20231855-20231874 None:intergenic 15.0%
!! AATTTAATAAATTGAGACTA+AGG - chr6_3:20231996-20232015 Msa0943940:intron 15.0%
!! GAAAATATAGACAATATATT+TGG - chr6_3:20232055-20232074 Msa0943940:CDS 15.0%
!!! AGAATTAAGAAATTTTTAAG+AGG + chr6_3:20232283-20232302 None:intergenic 15.0%
!! ACTATAAAATAAATTCCTTA+TGG + chr6_3:20232678-20232697 None:intergenic 15.0%
!! ATATTCAAAAAACAAAATCA+TGG + chr6_3:20232765-20232784 None:intergenic 15.0%
!!! TAATTTTGAAAAGTCTTTGT+AGG - chr6_3:20224700-20224719 Msa0943940:three_prime_UTR 20.0%
!!! AATTTTGAAAAGTCTTTGTA+GGG - chr6_3:20224701-20224720 Msa0943940:three_prime_UTR 20.0%
!! AACAATATCACAAAAATGAA+TGG - chr6_3:20224900-20224919 Msa0943940:three_prime_UTR 20.0%
!! AATTTAAATGTTTCAGAGAT+TGG + chr6_3:20225146-20225165 None:intergenic 20.0%
!!! TTAAGAGTATTTGATCTATA+TGG - chr6_3:20225167-20225186 Msa0943940:CDS 20.0%
!! AATTTAAGAAACTGAGTTTA+AGG - chr6_3:20225356-20225375 Msa0943940:CDS 20.0%
!!! TGAATAATTTTGATTGCTTA+TGG + chr6_3:20227463-20227482 None:intergenic 20.0%
!! ATACGTTTATTCATTTGATA+AGG + chr6_3:20228068-20228087 None:intergenic 20.0%
!! ATCTAATTTCTCACATAAAT+AGG + chr6_3:20228169-20228188 None:intergenic 20.0%
!! TAAAAAAATTATTCAATGCG+GGG - chr6_3:20228667-20228686 Msa0943940:intron 20.0%
!!! TTTTATGAGAATTAAGTATG+GGG - chr6_3:20228782-20228801 Msa0943940:intron 20.0%
!!! AATGTAATTTTTTTTGGTGT+CGG + chr6_3:20228901-20228920 None:intergenic 20.0%
!!! CAAGATATAGTTTCTTTTTT+TGG + chr6_3:20229025-20229044 None:intergenic 20.0%
!!! TTTTTGTATTGGAAATTGTA+CGG + chr6_3:20229081-20229100 None:intergenic 20.0%
!! ATAAGCTTTCAATAAATGTT+TGG + chr6_3:20229219-20229238 None:intergenic 20.0%
!!! AACTTTTTCTTTGTAAATTG+TGG - chr6_3:20229718-20229737 Msa0943940:intron 20.0%
!! ATATATTTAAGGATAATGCT+TGG - chr6_3:20229968-20229987 Msa0943940:intron 20.0%
!! AGAAATGTGAAAAAAACAAA+GGG + chr6_3:20230064-20230083 None:intergenic 20.0%
!! AAGAAATGTGAAAAAAACAA+AGG + chr6_3:20230065-20230084 None:intergenic 20.0%
!! TTTATTACACATACAAACAA+AGG + chr6_3:20230147-20230166 None:intergenic 20.0%
!! ATGCATATAGTAATTTGAAA+AGG - chr6_3:20230236-20230255 Msa0943940:intron 20.0%
!! GGACAAAAATAAAATCAAAT+GGG - chr6_3:20230272-20230291 Msa0943940:intron 20.0%
!!! TTATTTTTCTTTCTACTACT+AGG - chr6_3:20230453-20230472 Msa0943940:intron 20.0%
!! GAAAATGGAATATATTGAAT+TGG + chr6_3:20231136-20231155 None:intergenic 20.0%
!! TATGATTGAATATTTGCTTT+AGG - chr6_3:20231229-20231248 Msa0943940:intron 20.0%
!! TGTTTCTTCTAATATCAAAT+AGG - chr6_3:20232101-20232120 Msa0943940:CDS 20.0%
!!! GAATCTATTTTTGTGAAATT+GGG - chr6_3:20232144-20232163 Msa0943940:CDS 20.0%
!! TATTAAATCATACAATTGCT+TGG - chr6_3:20232220-20232239 Msa0943940:CDS 20.0%
!!! ATAGTATAATTTGTCTTGAA+TGG - chr6_3:20232451-20232470 Msa0943940:CDS 20.0%
!!! AACATTAGCTAAGTTTTTTT+AGG - chr6_3:20232570-20232589 Msa0943940:CDS 20.0%
!!! ACTATAATTCATGATGATTT+TGG + chr6_3:20232641-20232660 None:intergenic 20.0%
!!! ATCATGAATTATAGTTCTAA+TGG - chr6_3:20232646-20232665 Msa0943940:CDS 20.0%
!! GTTAATAATTGTAGAGAAAA+TGG - chr6_3:20233411-20233430 Msa0943940:intron 20.0%
!!! ACCATCTTAAAATTTAAGTT+CGG - chr6_3:20233876-20233895 Msa0943940:five_prime_UTR 20.0%
!! ATTTGACAGAACTTTTCAAA+GGG + chr6_3:20224748-20224767 None:intergenic 25.0%
!! AATTTGACAGAACTTTTCAA+AGG + chr6_3:20224749-20224768 None:intergenic 25.0%
!!! TATAGAAAGAGAAAAGTGTT+TGG + chr6_3:20224793-20224812 None:intergenic 25.0%
! GATAAAATGAGTAATTACCA+TGG + chr6_3:20225021-20225040 None:intergenic 25.0%
! CAACATAAACAATGGTTATT+GGG + chr6_3:20225059-20225078 None:intergenic 25.0%
! ACAACATAAACAATGGTTAT+TGG + chr6_3:20225060-20225079 None:intergenic 25.0%
!!! TTATTTTTGTTGTATTGGGT+TGG - chr6_3:20225109-20225128 Msa0943940:CDS 25.0%
! AAGTCATGAAGAATAAAGTT+TGG + chr6_3:20225914-20225933 None:intergenic 25.0%
! TTTAGGTGTTCAAATGATAA+TGG - chr6_3:20226426-20226445 Msa0943940:intron 25.0%
! AATGGTATTGTCCTAAAATT+TGG - chr6_3:20226444-20226463 Msa0943940:intron 25.0%
! TAATTCCAATGAATCAAAGT+TGG - chr6_3:20226691-20226710 Msa0943940:intron 25.0%
! CTCTATAGAAGTGAATTATA+AGG - chr6_3:20227126-20227145 Msa0943940:intron 25.0%
! TTGCGACAATATATTTACAA+GGG + chr6_3:20227165-20227184 None:intergenic 25.0%
! ATTGCGACAATATATTTACA+AGG + chr6_3:20227166-20227185 None:intergenic 25.0%
!! TTCTTTATCATGTATGCTTT+TGG + chr6_3:20227302-20227321 None:intergenic 25.0%
!! AAAAGCATACATGATAAAGA+AGG - chr6_3:20227301-20227320 Msa0943940:intron 25.0%
!!! TTGTATTGTGTTTGATTTTG+TGG - chr6_3:20227332-20227351 Msa0943940:intron 25.0%
! CTAAAAGTGAATTGAAAGTA+AGG - chr6_3:20227402-20227421 Msa0943940:intron 25.0%
! TATGGGTAAATTATCCAAAT+TGG - chr6_3:20227561-20227580 Msa0943940:intron 25.0%
! TCTCATTTGTTCACTTTAAA+AGG + chr6_3:20227663-20227682 None:intergenic 25.0%
!! TTTTAGATATGTCATGAACT+TGG + chr6_3:20227951-20227970 None:intergenic 25.0%
! ATTTCTCACATAAATAGGAT+TGG + chr6_3:20228164-20228183 None:intergenic 25.0%
!!! ATGTAATTTTTTTTGGTGTC+GGG + chr6_3:20228900-20228919 None:intergenic 25.0%
! CACTGAAAAATTAAAGGAAA+AGG + chr6_3:20229144-20229163 None:intergenic 25.0%
!!! TTTCCTTTAATTTTTCAGTG+TGG - chr6_3:20229144-20229163 Msa0943940:intron 25.0%
! TTTCCACACTGAAAAATTAA+AGG + chr6_3:20229150-20229169 None:intergenic 25.0%
! TGTGGAAATGAAATTATGAA+GGG - chr6_3:20229162-20229181 Msa0943940:intron 25.0%
! ACTTTCAATGTATTTCAATG+AGG + chr6_3:20229244-20229263 None:intergenic 25.0%
!!! ACCAATTTTAAAGTTGTGTT+TGG - chr6_3:20229491-20229510 Msa0943940:intron 25.0%
! TTATCGTAAAAAAATTACGG+TGG + chr6_3:20229539-20229558 None:intergenic 25.0%
!! TTTTTGCTTATAAATGTGAC+CGG + chr6_3:20229829-20229848 None:intergenic 25.0%
! TTCTTATAAATGTGACCATA+TGG - chr6_3:20229942-20229961 Msa0943940:intron 25.0%
! CCTTAAATATATACTCCATA+TGG + chr6_3:20229960-20229979 None:intergenic 25.0%
! CCATATGGAGTATATATTTA+AGG - chr6_3:20229957-20229976 Msa0943940:intron 25.0%
! AAATGTGAAAAAAACAAAGG+GGG + chr6_3:20230062-20230081 None:intergenic 25.0%
! GAAATGTGAAAAAAACAAAG+GGG + chr6_3:20230063-20230082 None:intergenic 25.0%
! GGGACAAAAATAAAATCAAA+TGG - chr6_3:20230271-20230290 Msa0943940:intron 25.0%
!! ATCATGGAATATCATCATTT+TGG - chr6_3:20230554-20230573 Msa0943940:intron 25.0%
! CAGTTATTCAATCAATGATT+TGG + chr6_3:20230597-20230616 None:intergenic 25.0%
!!! GTTTAATTTTTCGTCTTGTT+AGG + chr6_3:20230646-20230665 None:intergenic 25.0%
!!! TTTTTTCTTCATTTTAGAGG+TGG + chr6_3:20230821-20230840 None:intergenic 25.0%
! TAAAAATCCATGAGATTAGA+AGG + chr6_3:20230962-20230981 None:intergenic 25.0%
! AATAAATGAGTCAGATATTC+CGG + chr6_3:20231012-20231031 None:intergenic 25.0%
!!! TGAAATGACTCAGTTATTTT+GGG + chr6_3:20231047-20231066 None:intergenic 25.0%
!! TTGAAATGACTCAGTTATTT+TGG + chr6_3:20231048-20231067 None:intergenic 25.0%
! ATGTAAAATAAAGGGGAAAA+TGG + chr6_3:20231151-20231170 None:intergenic 25.0%
! GATAAAGTAAAAAGAAAAGG+AGG - chr6_3:20231340-20231359 Msa0943940:intron 25.0%
! ATGAGATATAGAAAGAGAAA+AGG + chr6_3:20224799-20224818 None:intergenic 25.0%
!! ATTAATTTTTCCTTCTCCTT+TGG - chr6_3:20231568-20231587 Msa0943940:intron 25.0%
! AACAACATCACAAAAATGAA+TGG - chr6_3:20231639-20231658 Msa0943940:intron 25.0%
! TAAGATATGATAACTTACCA+TGG + chr6_3:20231736-20231755 None:intergenic 25.0%
!!! GCAAGTAGTTGATTTTATAT+AGG - chr6_3:20232033-20232052 Msa0943940:CDS 25.0%
!!! TATTTGGTTCTTTTCTTCAA+AGG - chr6_3:20232071-20232090 Msa0943940:CDS 25.0%
!!! ATTTGGTTCTTTTCTTCAAA+GGG - chr6_3:20232072-20232091 Msa0943940:CDS 25.0%
!!! CGAATCTATTTTTGTGAAAT+TGG - chr6_3:20232143-20232162 Msa0943940:CDS 25.0%
! GAGTTTCAACAAAATTATGA+TGG + chr6_3:20232491-20232510 None:intergenic 25.0%
! AAAACCAATAATCGTAAACA+CGG - chr6_3:20232597-20232616 Msa0943940:CDS 25.0%
!! ATAATTCATGATGATTTTGG+TGG + chr6_3:20232638-20232657 None:intergenic 25.0%
! AAGTTATCCAGAATAAAGTT+TGG + chr6_3:20232802-20232821 None:intergenic 25.0%
!!! TTCTCAATGTTTTGAATATG+AGG + chr6_3:20232892-20232911 None:intergenic 25.0%
!!! TAGTTTTGACCTATTATGTT+CGG + chr6_3:20233508-20233527 None:intergenic 25.0%
!! AATTTGTTCCTGAATCATTT+AGG - chr6_3:20233697-20233716 Msa0943940:intron 25.0%
ATCACAAAAATGAATGGTGA+AGG - chr6_3:20224906-20224925 Msa0943940:three_prime_UTR 30.0%
AATTACCATGGTTGTAGAAT+TGG + chr6_3:20225009-20225028 None:intergenic 30.0%
GATCTGATTCATGTAAACAA+TGG - chr6_3:20225231-20225250 Msa0943940:CDS 30.0%
TGTGAAATAGACTGAAATTG+TGG - chr6_3:20225616-20225635 Msa0943940:CDS 30.0%
! GATTTTGTCAAACTCACTAT+GGG + chr6_3:20225692-20225711 None:intergenic 30.0%
! TGATTTTGTCAAACTCACTA+TGG + chr6_3:20225693-20225712 None:intergenic 30.0%
TAGTGAGTTTGACAAAATCA+CGG - chr6_3:20225693-20225712 Msa0943940:CDS 30.0%
AAAAACCATAAAATTCGACG+TGG + chr6_3:20225833-20225852 None:intergenic 30.0%
!! TTCTCAATGTTTTGAGTATG+AGG + chr6_3:20226006-20226025 None:intergenic 30.0%
GTATTGTCCTAAAATTTGGT+CGG - chr6_3:20226448-20226467 Msa0943940:intron 30.0%
TATTGTCCTAAAATTTGGTC+GGG - chr6_3:20226449-20226468 Msa0943940:intron 30.0%
!! AAGATTAAGCATTGAACCTT+TGG + chr6_3:20226496-20226515 None:intergenic 30.0%
GGTAACAATTGTAGAGAAAA+TGG - chr6_3:20226546-20226565 Msa0943940:intron 30.0%
TTCATTGGAATTATCCATGA+AGG + chr6_3:20226684-20226703 None:intergenic 30.0%
TTGTTCCAACTTTGATTCAT+TGG + chr6_3:20226699-20226718 None:intergenic 30.0%
! TTGGAACAATGTTACTTCTA+TGG - chr6_3:20226710-20226729 Msa0943940:intron 30.0%
! AACATTTTCACACCAAACAT+TGG - chr6_3:20226819-20226838 Msa0943940:intron 30.0%
TTACTAGTAGTAGATGAAGA+AGG + chr6_3:20226939-20226958 None:intergenic 30.0%
ACTAGTAATAGTTGTATCTC+AGG - chr6_3:20226951-20226970 Msa0943940:intron 30.0%
AATAGTTGTATCTCAGGTAA+TGG - chr6_3:20226957-20226976 Msa0943940:intron 30.0%
ATCTGCTTCGTTAATTGTAA+CGG + chr6_3:20227066-20227085 None:intergenic 30.0%
! ACAATTAACGAAGCAGATTT+TGG - chr6_3:20227068-20227087 Msa0943940:CDS 30.0%
AACGTGCTATAAACTACATT+AGG - chr6_3:20227234-20227253 Msa0943940:intron 30.0%
TATGTAAATGATACCCACAA+AGG - chr6_3:20227493-20227512 Msa0943940:intron 30.0%
! ATGCGTCTAACTCTTTTTAT+GGG - chr6_3:20227544-20227563 Msa0943940:intron 30.0%
! TTGCTATACTTTTGCCAATT+TGG + chr6_3:20227578-20227597 None:intergenic 30.0%
!! TGAACTTAACCTAAGTTGAT+AGG + chr6_3:20227729-20227748 None:intergenic 30.0%
AAAAAATATTGACCAACGGT+TGG - chr6_3:20228094-20228113 Msa0943940:intron 30.0%
GTGAGAAATTAGATCAACAA+AGG - chr6_3:20228175-20228194 Msa0943940:intron 30.0%
! TTTTCCCTGATTTCAAAACA+CGG - chr6_3:20228393-20228412 Msa0943940:intron 30.0%
AAACTACCATCGATATTTGA+AGG - chr6_3:20228541-20228560 Msa0943940:intron 30.0%
AATGCATAATGCATAGTTCA+GGG - chr6_3:20228867-20228886 Msa0943940:intron 30.0%
!!! TGTAATTTTTTTTGGTGTCG+GGG + chr6_3:20228899-20228918 None:intergenic 30.0%
TTCCTTCAATAATGTCCTTA+GGG + chr6_3:20229001-20229020 None:intergenic 30.0%
! TTTTAGATGCTTAATCAGCA+TGG - chr6_3:20229108-20229127 Msa0943940:intron 30.0%
GTGTGGAAATGAAATTATGA+AGG - chr6_3:20229161-20229180 Msa0943940:intron 30.0%
!! TCAAAGTCAGAATCACTTTT+TGG - chr6_3:20229284-20229303 Msa0943940:intron 30.0%
! GTATCTTTTGACAGTATCTT+TGG - chr6_3:20229375-20229394 Msa0943940:intron 30.0%
!! GCCAAACACAACTTTAAAAT+TGG + chr6_3:20229495-20229514 None:intergenic 30.0%
! TTTAAAGTTGTGTTTGGCAT+TGG - chr6_3:20229497-20229516 Msa0943940:intron 30.0%
CAACAGAGAGATAAAGTAAA+AGG + chr6_3:20229676-20229695 None:intergenic 30.0%
!! GTGTTATTTGAACAACCATT+TGG + chr6_3:20229763-20229782 None:intergenic 30.0%
AGTAGGTGTGTTAAAATTAG+AGG + chr6_3:20229787-20229806 None:intergenic 30.0%
CATTGAATAGGTAATGTATC+CGG - chr6_3:20229864-20229883 Msa0943940:intron 30.0%
ATCTAACATCTAAATGTGAC+CGG + chr6_3:20229886-20229905 None:intergenic 30.0%
CATACAAACAAAGGACAATT+TGG + chr6_3:20230138-20230157 None:intergenic 30.0%
! TATTAATTAGGGGCATGTTT+AGG - chr6_3:20230200-20230219 Msa0943940:intron 30.0%
TTGAAAAGGAGTTTACATTC+AGG - chr6_3:20230250-20230269 Msa0943940:intron 30.0%
TGAAAAGGAGTTTACATTCA+GGG - chr6_3:20230251-20230270 Msa0943940:intron 30.0%
TCAAATGGGTGTTTAGATAT+AGG - chr6_3:20230286-20230305 Msa0943940:intron 30.0%
CAAATGGGTGTTTAGATATA+GGG - chr6_3:20230287-20230306 Msa0943940:intron 30.0%
! AATTGTGTCGCTGTAAATAT+CGG - chr6_3:20230420-20230439 Msa0943940:intron 30.0%
CTACTACTAGGTTATTATCA+TGG - chr6_3:20230465-20230484 Msa0943940:intron 30.0%
GATAACTAAGACCAACTTAT+TGG - chr6_3:20230867-20230886 Msa0943940:intron 30.0%
ATTCTTTCCTTCTAATCTCA+TGG - chr6_3:20230952-20230971 Msa0943940:intron 30.0%
ATAAATGAGTCAGATATTCC+GGG + chr6_3:20231011-20231030 None:intergenic 30.0%
TGTGAAAAATCAAACTGACT+GGG - chr6_3:20231184-20231203 Msa0943940:intron 30.0%
AAGGAGGTGAAAAAAAACAA+AGG - chr6_3:20231356-20231375 Msa0943940:intron 30.0%
ATCACAAAAATGAATGGTGA+AGG - chr6_3:20224906-20224925 Msa0943940:three_prime_UTR 30.0%
!! GATTTTAGTATCATGCTCTT+TGG - chr6_3:20231684-20231703 Msa0943940:intron 30.0%
AATTTGTCTTGAATGGTGAA+AGG - chr6_3:20232458-20232477 Msa0943940:CDS 30.0%
! TTCTAATGGTTTGTACCATA+AGG - chr6_3:20232660-20232679 Msa0943940:CDS 30.0%
TAAAGTTTGGCAACAAACTT+TGG + chr6_3:20232789-20232808 None:intergenic 30.0%
TTTGTTGCCAAACTTTATTC+TGG - chr6_3:20225904-20225923 Msa0943940:intron 30.0%
TTCAGGTGCTCAAATAATAA+TGG - chr6_3:20233291-20233310 Msa0943940:intron 30.0%
AATGGCATTGTCCTAAAATT+TGG - chr6_3:20233309-20233328 Msa0943940:intron 30.0%
ATATTTCTCTTGTGGTTTCT+AGG + chr6_3:20233381-20233400 None:intergenic 30.0%
TTGCATCAATATTTCTCTTG+TGG + chr6_3:20233389-20233408 None:intergenic 30.0%
TATCTGAATCCGAACATAAT+AGG - chr6_3:20233496-20233515 Msa0943940:intron 30.0%
! TTGTTCAAGCTTTGATTCAA+TGG + chr6_3:20233564-20233583 None:intergenic 30.0%
!! GCCGAACTTAAATTTTAAGA+TGG + chr6_3:20233880-20233899 None:intergenic 30.0%
AATGAATGAGCACAAGAAAT+AGG + chr6_3:20233970-20233989 None:intergenic 30.0%
!! TCTTCTAGTTTCATGCTCTT+TGG - chr6_3:20224948-20224967 Msa0943940:three_prime_UTR 35.0%
TGATTCATGTAAACAATGGC+TGG - chr6_3:20225235-20225254 Msa0943940:CDS 35.0%
AGCTGTCTTATGAAAGTAGT+TGG - chr6_3:20225386-20225405 Msa0943940:CDS 35.0%
TATGGGTAATTCCATAAACC+AGG + chr6_3:20225675-20225694 None:intergenic 35.0%
! ATGTACCACGTCGAATTTTA+TGG - chr6_3:20225825-20225844 Msa0943940:CDS 35.0%
TGCAGTAACTCAAAGCATAA+AGG - chr6_3:20225970-20225989 Msa0943940:intron 35.0%
! AAGCACTGTGGAAGATAATA+TGG - chr6_3:20226071-20226090 Msa0943940:intron 35.0%
! CAATCTTGTCTGGTTTCTTT+AGG + chr6_3:20226125-20226144 None:intergenic 35.0%
ACAATGAGAAATGTTGCTGT+CGG - chr6_3:20226261-20226280 Msa0943940:intron 35.0%
ATTCAACATTTGAGCCATGT+TGG + chr6_3:20226395-20226414 None:intergenic 35.0%
! CATTTTCCCGACCAAATTTT+AGG + chr6_3:20226458-20226477 None:intergenic 35.0%
TTGCATCAACATTTCTCTTG+TGG + chr6_3:20226524-20226543 None:intergenic 35.0%
AAGAGAAATGTTGATGCAAG+TGG - chr6_3:20226525-20226544 Msa0943940:intron 35.0%
CAATTGTAGAGAAAATGGAG+AGG - chr6_3:20226551-20226570 Msa0943940:intron 35.0%
TATTCGAATCCGAACAGAAT+AGG - chr6_3:20226631-20226650 Msa0943940:intron 35.0%
AGGTTTAGACCTATTCTGTT+CGG + chr6_3:20226643-20226662 None:intergenic 35.0%
AAGTAGGATCAATGCCATAA+GGG + chr6_3:20226761-20226780 None:intergenic 35.0%
ACAAATTGCAAGCCAATGTT+TGG + chr6_3:20226834-20226853 None:intergenic 35.0%
! AATTTGTTCCTGCATCAAAC+AGG - chr6_3:20226847-20226866 Msa0943940:intron 35.0%
AATGTGTCCATAGGTTCAAA+TGG - chr6_3:20226903-20226922 Msa0943940:intron 35.0%
AATGCAACCATTTGAACCTA+TGG + chr6_3:20226913-20226932 None:intergenic 35.0%
ATATGTGAGCATTTGTACGA+AGG - chr6_3:20227039-20227058 Msa0943940:CDS 35.0%
! GTAGTTTATAGCACGTTTTG+AGG + chr6_3:20227231-20227250 None:intergenic 35.0%
AGTGAATTGAAAGTAAGGTG+AGG - chr6_3:20227407-20227426 Msa0943940:intron 35.0%
!! AACTTAGTTTGTGCCTTTGT+GGG + chr6_3:20227509-20227528 None:intergenic 35.0%
TAAAAAGAGTTAGACGCATG+AGG + chr6_3:20227543-20227562 None:intergenic 35.0%
! CATGCGTCTAACTCTTTTTA+TGG - chr6_3:20227543-20227562 Msa0943940:intron 35.0%
ATGTGATGTCCTATCAACTT+AGG - chr6_3:20227717-20227736 Msa0943940:intron 35.0%
TCAACTTAGGTTAAGTTCAC+AGG - chr6_3:20227730-20227749 Msa0943940:intron 35.0%
! CAACTCGTTTCAAGCAATTT+TGG + chr6_3:20227913-20227932 None:intergenic 35.0%
! TTGAAACGAGTTGAATTTCG+AGG - chr6_3:20227920-20227939 Msa0943940:intron 35.0%
AATAGTTGAACCTACCTCTT+TGG - chr6_3:20228033-20228052 Msa0943940:intron 35.0%
ATAGTTGAACCTACCTCTTT+GGG - chr6_3:20228034-20228053 Msa0943940:intron 35.0%
TAAGGAGTTATAACCCAAAG+AGG + chr6_3:20228050-20228069 None:intergenic 35.0%
!!! TTTTTTGTTTCACCAACCGT+TGG + chr6_3:20228109-20228128 None:intergenic 35.0%
TCTCACATAAATAGGATTGG+AGG + chr6_3:20228161-20228180 None:intergenic 35.0%
AAAACCCGTCAAATTGGATT+TGG + chr6_3:20228340-20228359 None:intergenic 35.0%
TTTCCCTGATTTCAAAACAC+GGG - chr6_3:20228394-20228413 Msa0943940:intron 35.0%
!!! AAACCCGTGTTTTGAAATCA+GGG + chr6_3:20228400-20228419 None:intergenic 35.0%
!!! TAAACCCGTGTTTTGAAATC+AGG + chr6_3:20228401-20228420 None:intergenic 35.0%
TGATTTCAAAACACGGGTTT+AGG - chr6_3:20228400-20228419 Msa0943940:intron 35.0%
GTTGATCCTTCAAATATCGA+TGG + chr6_3:20228550-20228569 None:intergenic 35.0%
ATGTATTACAACGTTGCTCT+TGG - chr6_3:20228617-20228636 Msa0943940:intron 35.0%
TGTATTACAACGTTGCTCTT+GGG - chr6_3:20228618-20228637 Msa0943940:intron 35.0%
AAAATTATTCAATGCGGGGA+CGG - chr6_3:20228671-20228690 Msa0943940:intron 35.0%
ATGAGAATTAAGTATGGGGA+CGG - chr6_3:20228786-20228805 Msa0943940:intron 35.0%
AACTGATAGACATGACAATG+GGG + chr6_3:20228838-20228857 None:intergenic 35.0%
GAACTGATAGACATGACAAT+GGG + chr6_3:20228839-20228858 None:intergenic 35.0%
CAATGCATAATGCATAGTTC+AGG - chr6_3:20228866-20228885 Msa0943940:intron 35.0%
GTTCCTTCAATAATGTCCTT+AGG + chr6_3:20229002-20229021 None:intergenic 35.0%
ATGATGTGAGAAAGAGAAAG+GGG + chr6_3:20229332-20229351 None:intergenic 35.0%
GATGATGTGAGAAAGAGAAA+GGG + chr6_3:20229333-20229352 None:intergenic 35.0%
! TGATGATGTGAGAAAGAGAA+AGG + chr6_3:20229334-20229353 None:intergenic 35.0%
ACTGTCAAAAGATACTGTAG+TGG + chr6_3:20229370-20229389 None:intergenic 35.0%
! ACTTTATCTCTCTGTTGCTT+TGG - chr6_3:20229679-20229698 Msa0943940:intron 35.0%
ACCAAAAGTTGTCAACCAAA+TGG - chr6_3:20229745-20229764 Msa0943940:intron 35.0%
! ACCATTTGGTTGACAACTTT+TGG + chr6_3:20229749-20229768 None:intergenic 35.0%
!! GGAGTATTTGCTATTACAGT+AGG + chr6_3:20229804-20229823 None:intergenic 35.0%
AACAAAGGGGGTTACATTAA+GGG + chr6_3:20230050-20230069 None:intergenic 35.0%
AAACAAAGGGGGTTACATTA+AGG + chr6_3:20230051-20230070 None:intergenic 35.0%
GAAAAACCCAATAGGTAAAG+GGG + chr6_3:20230345-20230364 None:intergenic 35.0%
CGAAAAACCCAATAGGTAAA+GGG + chr6_3:20230346-20230365 None:intergenic 35.0%
TCGAAAAACCCAATAGGTAA+AGG + chr6_3:20230347-20230366 None:intergenic 35.0%
!! TTACCTATTGGGTTTTTCGA+AGG - chr6_3:20230347-20230366 Msa0943940:intron 35.0%
TTTCCTTCGAAAAACCCAAT+AGG + chr6_3:20230353-20230372 None:intergenic 35.0%
ACATAAAGGACTAAAGACGA+AGG - chr6_3:20230765-20230784 Msa0943940:intron 35.0%
! CTTTTCTCTCTCCAATAAGT+TGG + chr6_3:20230881-20230900 None:intergenic 35.0%
GTGTGAAAAATCAAACTGAC+TGG - chr6_3:20231183-20231202 Msa0943940:intron 35.0%
AAAAATCAAACTGACTGGGA+CGG - chr6_3:20231188-20231207 Msa0943940:intron 35.0%
!! TGTTCTTTTGCACTTTTTGC+AGG - chr6_3:20231430-20231449 Msa0943940:intron 35.0%
!! GTTCTTTTGCACTTTTTGCA+GGG - chr6_3:20231431-20231450 Msa0943940:intron 35.0%
!! AGAGAAAAGGAGAAAGTGTT+TGG + chr6_3:20231537-20231556 None:intergenic 35.0%
!!! TGGTGCTCTTGTTATTTTCA+AGG - chr6_3:20232240-20232259 Msa0943940:intron 35.0%
! AAAAGTTTACACAAGCACTG+TGG - chr6_3:20232945-20232964 Msa0943940:intron 35.0%
! AAGCACTGTGGAAGATAATA+TGG - chr6_3:20226071-20226090 Msa0943940:intron 35.0%
AGACAAAGTCCTCAAAAAAC+CGG - chr6_3:20232999-20233018 Msa0943940:intron 35.0%
ACAATGAGAAACGTTCCTTT+CGG - chr6_3:20233147-20233166 Msa0943940:intron 35.0%
! ATTTGAGGTTGAAATTCCAC+CGG + chr6_3:20233232-20233251 None:intergenic 35.0%
! GACGTTACTTTCAGAATTTG+AGG + chr6_3:20233247-20233266 None:intergenic 35.0%
CATTGTCCTAAAATTTGGTC+CGG - chr6_3:20233314-20233333 Msa0943940:intron 35.0%
! CATTTTCCGGACCAAATTTT+AGG + chr6_3:20233323-20233342 None:intergenic 35.0%
! TCATGGAGAAATGCATTTTC+CGG + chr6_3:20233336-20233355 None:intergenic 35.0%
ACATCGAATCGTTAGATTCA+TGG + chr6_3:20233353-20233372 None:intergenic 35.0%
TGTCACAGAAGATACACATA+AGG + chr6_3:20233451-20233470 None:intergenic 35.0%
TGTGTATCTTCTGTGACAAA+TGG - chr6_3:20233453-20233472 Msa0943940:intron 35.0%
ATTGAAGATTGAACCATGGA+AGG + chr6_3:20233591-20233610 None:intergenic 35.0%
TTGCATTGAAGATTGAACCA+TGG + chr6_3:20233595-20233614 None:intergenic 35.0%
ATGCAAATGTGTAACCCTTA+TGG - chr6_3:20233609-20233628 Msa0943940:intron 35.0%
ATGTTCGGTCTTAAGATGTT+CGG + chr6_3:20233669-20233688 None:intergenic 35.0%
AACATCTTAAGACCGAACAT+TGG - chr6_3:20233669-20233688 Msa0943940:intron 35.0%
ACAAATTGCAAGCCAATGTT+CGG + chr6_3:20226834-20226853 None:intergenic 35.0%
GTTCCTGAATCATTTAGGAA+TGG - chr6_3:20233702-20233721 Msa0943940:intron 35.0%
GATCCATTCCTAAATGATTC+AGG + chr6_3:20233708-20233727 None:intergenic 35.0%
AGGAATGGATCAGTTTCAAT+AGG - chr6_3:20233717-20233736 Msa0943940:intron 35.0%
TAGCTAGTAGTAGATGAAGA+AGG + chr6_3:20233762-20233781 None:intergenic 35.0%
!!! CGAGATTCTGTTTTGATTGA+CGG - chr6_3:20233829-20233848 Msa0943940:exon 35.0%
CCTTACAGACCAATATTGTA+CGG + chr6_3:20233912-20233931 None:intergenic 35.0%
! CGTACAATATTGGTCTGTAA+GGG - chr6_3:20233910-20233929 Msa0943940:five_prime_UTR 35.0%
! GTACAATATTGGTCTGTAAG+GGG - chr6_3:20233911-20233930 Msa0943940:five_prime_UTR 35.0%
TCTTGTGCTCATTCATTTCA+AGG - chr6_3:20233973-20233992 Msa0943940:five_prime_UTR 35.0%
CTTGTGCTCATTCATTTCAA+GGG - chr6_3:20233974-20233993 Msa0943940:five_prime_UTR 35.0%
GCTCTTTGGTAAGAAGATTC+CGG - chr6_3:20224962-20224981 Msa0943940:exon 40.0%
TGAATCTGAGAAGAACTCAC+CGG + chr6_3:20224984-20225003 None:intergenic 40.0%
GGTAATTCCATAAACCAGGA+GGG + chr6_3:20225671-20225690 None:intergenic 40.0%
! AAAAGTGAACACAAGCACTG+TGG - chr6_3:20226059-20226078 Msa0943940:intron 40.0%
GGACATTGAACAATCTTGTC+TGG + chr6_3:20226135-20226154 None:intergenic 40.0%
! GTGTCGAAACTTTTGCATCT+CGG + chr6_3:20226156-20226175 None:intergenic 40.0%
ACTACAACGTCAATCAACCT+CGG - chr6_3:20226196-20226215 Msa0943940:intron 40.0%
TGTCACAGATATTGGACCAA+CGG - chr6_3:20226234-20226253 Msa0943940:intron 40.0%
ATTTCTCATTGTTCCACCGT+TGG + chr6_3:20226253-20226272 None:intergenic 40.0%
!! AGAGTCGTTGGTTTCTAAAC+TGG + chr6_3:20226364-20226383 None:intergenic 40.0%
TAGAAACCAACGACTCTTCT+AGG - chr6_3:20226367-20226386 Msa0943940:intron 40.0%
CTCAAATGTTGAATCTGCTG+CGG - chr6_3:20226401-20226420 Msa0943940:intron 40.0%
! TTGAATCTGCTGCGGTTTTT+AGG - chr6_3:20226409-20226428 Msa0943940:intron 40.0%
! GAATTATCCATGAAGGTGCA+GGG + chr6_3:20226677-20226696 None:intergenic 40.0%
ATGCAGATGTGTAACCCTTA+TGG - chr6_3:20226744-20226763 Msa0943940:intron 40.0%
GAAGTAGGATCAATGCCATA+AGG + chr6_3:20226762-20226781 None:intergenic 40.0%
TTGATCCTACTTCAATGCAG+TGG - chr6_3:20226769-20226788 Msa0943940:intron 40.0%
ATGTTTGTAACCTCAACCCT+CGG + chr6_3:20226804-20226823 None:intergenic 40.0%
AGGAATGGAACACCTTTGTA+TGG - chr6_3:20226867-20226886 Msa0943940:intron 40.0%
CCATTTCCACTACCATACAA+AGG + chr6_3:20226882-20226901 None:intergenic 40.0%
!! CCTTTGTATGGTAGTGGAAA+TGG - chr6_3:20226879-20226898 Msa0943940:intron 40.0%
GGAAATGGAAATGTGTCCAT+AGG - chr6_3:20226894-20226913 Msa0943940:intron 40.0%
AATCTCATGTGTGTTTGCCA+AGG + chr6_3:20226992-20227011 None:intergenic 40.0%
GCTTAGAGGTAGAAGAATTG+TGG - chr6_3:20227429-20227448 Msa0943940:intron 40.0%
!! GAACTTAGTTTGTGCCTTTG+TGG + chr6_3:20227510-20227529 None:intergenic 40.0%
GAGTTATAACCCAAAGAGGT+AGG + chr6_3:20228046-20228065 None:intergenic 40.0%
TACGAACTGAGCTAAGTTCA+CGG + chr6_3:20228276-20228295 None:intergenic 40.0%
! CGTCAAATTGGATTTGGTTC+GGG + chr6_3:20228334-20228353 None:intergenic 40.0%
! CCGTCAAATTGGATTTGGTT+CGG + chr6_3:20228335-20228354 None:intergenic 40.0%
CCGAACCAAATCCAATTTGA+CGG - chr6_3:20228332-20228351 Msa0943940:intron 40.0%
CGAACCAAATCCAATTTGAC+GGG - chr6_3:20228333-20228352 Msa0943940:intron 40.0%
TTCAAAACACGGGTTTAGGA+CGG - chr6_3:20228404-20228423 Msa0943940:intron 40.0%
! TTTGGGACGAGTTTGTGTAT+GGG + chr6_3:20228459-20228478 None:intergenic 40.0%
! ATTTGGGACGAGTTTGTGTA+TGG + chr6_3:20228460-20228479 None:intergenic 40.0%
TGTTAACGTGAGCGTATTGT+TGG - chr6_3:20228591-20228610 Msa0943940:intron 40.0%
GTATTACAACGTTGCTCTTG+GGG - chr6_3:20228619-20228638 Msa0943940:intron 40.0%
AAATTATTCAATGCGGGGAC+GGG - chr6_3:20228672-20228691 Msa0943940:intron 40.0%
ATACAATTTCTCATCCCCGT+TGG - chr6_3:20228737-20228756 Msa0943940:intron 40.0%
TGAGAATTAAGTATGGGGAC+GGG - chr6_3:20228787-20228806 Msa0943940:intron 40.0%
CGAACTGATAGACATGACAA+TGG + chr6_3:20228840-20228859 None:intergenic 40.0%
TGCCCTAAGGACATTATTGA+AGG - chr6_3:20228996-20229015 Msa0943940:intron 40.0%
! TTTTGGCCCATTGTTCCTTT+CGG - chr6_3:20229301-20229320 Msa0943940:intron 40.0%
GATACTGTAGTGGCTAAGAA+TGG + chr6_3:20229360-20229379 None:intergenic 40.0%
GTCTTCTCTCTCTTCATTCT+TGG - chr6_3:20229468-20229487 Msa0943940:intron 40.0%
GTAATAGCAAATACTCCCTC+CGG - chr6_3:20229807-20229826 Msa0943940:intron 40.0%
TGCTTATAAATGTGACCGGA+GGG + chr6_3:20229825-20229844 None:intergenic 40.0%
TTGCTTATAAATGTGACCGG+AGG + chr6_3:20229826-20229845 None:intergenic 40.0%
TGGGTGTTTAGATATAGGGA+CGG - chr6_3:20230291-20230310 Msa0943940:intron 40.0%
TGTTTAGATATAGGGACGGA+AGG - chr6_3:20230295-20230314 Msa0943940:intron 40.0%
! CGTCTTGTTAGGTGTTCATT+TGG + chr6_3:20230635-20230654 None:intergenic 40.0%
TAAAGGACTAAAGACGAAGG+AGG - chr6_3:20230768-20230787 Msa0943940:intron 40.0%
CAAAAACACACCAAAGGAGA+AGG + chr6_3:20231581-20231600 None:intergenic 40.0%
ACAGCTCAAAAACACACCAA+AGG + chr6_3:20231587-20231606 None:intergenic 40.0%
! GCTCTTTGGAAAGAAGATTC+AGG - chr6_3:20231698-20231717 Msa0943940:intron 40.0%
ACTTACCATGGTTGAAGAGT+TGG + chr6_3:20231724-20231743 None:intergenic 40.0%
GTCACCGTGTTTACGATTAT+TGG + chr6_3:20232604-20232623 None:intergenic 40.0%
TGCAGTAACTCAAAGCACAA+AGG - chr6_3:20232856-20232875 Msa0943940:intron 40.0%
!!! CAATCTTGTCCGGTTTTTTG+AGG + chr6_3:20233011-20233030 None:intergenic 40.0%
GGACATTGAACAATCTTGTC+CGG + chr6_3:20226135-20226154 None:intergenic 40.0%
GTGTTGAAACTGTTGCATCT+TGG + chr6_3:20233042-20233061 None:intergenic 40.0%
ACTACAATGTCAGTCAACCT+CGG - chr6_3:20233082-20233101 Msa0943940:intron 40.0%
!! GTCGGAAGTGTCATAGATAT+TGG - chr6_3:20233112-20233131 Msa0943940:intron 40.0%
TGTCATAGATATTGGACTGC+CGG - chr6_3:20233120-20233139 Msa0943940:intron 40.0%
AACGTTTCTCATTGTTCCAC+CGG + chr6_3:20233142-20233161 None:intergenic 40.0%
GTGACAAATGGTTATACTCG+AGG - chr6_3:20233465-20233484 Msa0943940:intron 40.0%
GAATCATCCATGAAGATGCA+AGG + chr6_3:20233542-20233561 None:intergenic 40.0%
CTTGAACAATGTTCCTTCCA+TGG - chr6_3:20233575-20233594 Msa0943940:intron 40.0%
AACTAGGATCAACGCCATAA+GGG + chr6_3:20233626-20233645 None:intergenic 40.0%
TTGATCCTAGTTCAATGCAG+TGG - chr6_3:20233634-20233653 Msa0943940:intron 40.0%
GTCTTAAGATGTTCGGCATA+TGG + chr6_3:20233662-20233681 None:intergenic 40.0%
! AGAATCTCGTGTGTTTTCCA+AGG + chr6_3:20233818-20233837 None:intergenic 40.0%
TTGATTGACGGCACTAATCT+TGG - chr6_3:20233841-20233860 Msa0943940:five_prime_UTR 40.0%
CAATATTGTACGGCTATGCT+AGG + chr6_3:20233902-20233921 None:intergenic 40.0%
CTAGCATAGCCGTACAATAT+TGG - chr6_3:20233900-20233919 Msa0943940:five_prime_UTR 40.0%
! CCGTACAATATTGGTCTGTA+AGG - chr6_3:20233909-20233928 Msa0943940:five_prime_UTR 40.0%
GGTGAGTTCTTCTCAGATTC+AGG - chr6_3:20224983-20225002 Msa0943940:CDS 45.0%
TCAGGCCAATTCTACAACCA+TGG - chr6_3:20225001-20225020 Msa0943940:CDS 45.0%
AACATAAGAGATAGCCCTCC+TGG - chr6_3:20225654-20225673 Msa0943940:CDS 45.0%
GGGTAATTCCATAAACCAGG+AGG + chr6_3:20225672-20225691 None:intergenic 45.0%
ATCAACCTCGGCATTTCTGT+CGG - chr6_3:20226208-20226227 Msa0943940:intron 45.0%
GTCGGAGTTGTCACAGATAT+TGG - chr6_3:20226226-20226245 Msa0943940:intron 45.0%
CATCGGACACTACAATCATG+TGG + chr6_3:20226329-20226348 None:intergenic 45.0%
CACATGATTGTAGTGTCCGA+TGG - chr6_3:20226327-20226346 Msa0943940:intron 45.0%
TTGGTTTCTAAACTGGCGGT+CGG + chr6_3:20226357-20226376 None:intergenic 45.0%
!! GTCGTTGGTTTCTAAACTGG+CGG + chr6_3:20226361-20226380 None:intergenic 45.0%
TTGGTACCTAGAAGAGTCGT+TGG + chr6_3:20226376-20226395 None:intergenic 45.0%
GACTCTTCTAGGTACCAACA+TGG - chr6_3:20226378-20226397 Msa0943940:intron 45.0%
GCATCTCTCGATGAATCCAA+AGG - chr6_3:20226477-20226496 Msa0943940:intron 45.0%
TGTGTATCGTCTGTGACGAA+CGG - chr6_3:20226588-20226607 Msa0943940:intron 45.0%
! GGAATTATCCATGAAGGTGC+AGG + chr6_3:20226678-20226697 None:intergenic 45.0%
TGACACCACTGCATTGAAGT+AGG + chr6_3:20226777-20226796 None:intergenic 45.0%
GTTCCTGCATCAAACAGGAA+TGG - chr6_3:20226852-20226871 Msa0943940:intron 45.0%
GTTCCATTCCTGTTTGATGC+AGG + chr6_3:20226858-20226877 None:intergenic 45.0%
GGAACACCTTTGTATGGTAG+TGG - chr6_3:20226873-20226892 Msa0943940:intron 45.0%
CATGTGTGTTTGCCAAGGAT+TGG + chr6_3:20226987-20227006 None:intergenic 45.0%
GAAAGTAAGGTGAGGCTTAG+AGG - chr6_3:20227415-20227434 Msa0943940:intron 45.0%
GTGAACTTAGCTCAGTTCGT+AGG - chr6_3:20228275-20228294 Msa0943940:intron 45.0%
!! CAAATTGGATTTGGTTCGGG+TGG + chr6_3:20228331-20228350 None:intergenic 45.0%
ATACCCAAACCCAGTCAAAC+GGG + chr6_3:20228364-20228383 None:intergenic 45.0%
CATACCCAAACCCAGTCAAA+CGG + chr6_3:20228365-20228384 None:intergenic 45.0%
ACTGGGTTTGGGTATGGATA+TGG - chr6_3:20228369-20228388 Msa0943940:intron 45.0%
CTGGGTTTGGGTATGGATAT+GGG - chr6_3:20228370-20228389 Msa0943940:intron 45.0%
! TCAAAACACGGGTTTAGGAC+GGG - chr6_3:20228405-20228424 Msa0943940:intron 45.0%
AATTATTCAATGCGGGGACG+GGG - chr6_3:20228673-20228692 Msa0943940:intron 45.0%
TTTCTCATCCCCGTTGGATA+TGG - chr6_3:20228743-20228762 Msa0943940:intron 45.0%
TTCTCATCCCCGTTGGATAT+GGG - chr6_3:20228744-20228763 Msa0943940:intron 45.0%
TTACCCTACCCATATCCAAC+GGG + chr6_3:20228755-20228774 None:intergenic 45.0%
GTTACCCTACCCATATCCAA+CGG + chr6_3:20228756-20228775 None:intergenic 45.0%
GAGAATTAAGTATGGGGACG+GGG - chr6_3:20228788-20228807 Msa0943940:intron 45.0%
TGATAGACATGACAATGGGG+CGG + chr6_3:20228835-20228854 None:intergenic 45.0%
TCTTGCTAACAAGTGCCCTA+AGG - chr6_3:20228983-20229002 Msa0943940:intron 45.0%
TGAAGAGAGAGAAGACAGCT+GGG + chr6_3:20229464-20229483 None:intergenic 45.0%
ATGAAGAGAGAGAAGACAGC+TGG + chr6_3:20229465-20229484 None:intergenic 45.0%
CATCACGAATTTACCGATCG+CGG - chr6_3:20229991-20230010 Msa0943940:intron 45.0%
AAGGGGGTTACATTAAGGGA+CGG + chr6_3:20230046-20230065 None:intergenic 45.0%
AACCCTTCCCCTTTACCTAT+TGG - chr6_3:20230335-20230354 Msa0943940:intron 45.0%
ACCCTTCCCCTTTACCTATT+GGG - chr6_3:20230336-20230355 Msa0943940:intron 45.0%
ACCCAATAGGTAAAGGGGAA+GGG + chr6_3:20230340-20230359 None:intergenic 45.0%
AACCCAATAGGTAAAGGGGA+AGG + chr6_3:20230341-20230360 None:intergenic 45.0%
ATGAGTCAGATATTCCGGGA+CGG + chr6_3:20231007-20231026 None:intergenic 45.0%
! GTCAACCTCGGCATTTTTGT+CGG - chr6_3:20233094-20233113 Msa0943940:intron 45.0%
CCTGAAAACCACAGCAGATT+CGG + chr6_3:20233277-20233296 None:intergenic 45.0%
AGAGCTACCTTGCATCTTCA+TGG - chr6_3:20233532-20233551 Msa0943940:intron 45.0%
GAACTAGGATCAACGCCATA+AGG + chr6_3:20233627-20233646 None:intergenic 45.0%
GCTAGTCATAGTTGTTGCTC+CGG - chr6_3:20233778-20233797 Msa0943940:CDS 45.0%
TCATAGTTGTTGCTCCGGTA+TGG - chr6_3:20233783-20233802 Msa0943940:CDS 45.0%
! CTCGTGTGTTTTCCAAGGAT+CGG + chr6_3:20233813-20233832 None:intergenic 45.0%
GAGCACAAGAAATAGGTGCA+TGG + chr6_3:20233963-20233982 None:intergenic 45.0%
!!! ATAAAAAAATGTTTTTTTTT+TGG - chr6_3:20225278-20225297 Msa0943940:CDS 5.0%
!!! TGATTTTTAAATATAAATTT+AGG + chr6_3:20230732-20230751 None:intergenic 5.0%
GAGATAGCCCTCCTGGTTTA+TGG - chr6_3:20225661-20225680 Msa0943940:CDS 50.0%
CACAGATATTGGACCAACGG+TGG - chr6_3:20226237-20226256 Msa0943940:intron 50.0%
AGAAATGTTGCTGTCGGTGC+AGG - chr6_3:20226267-20226286 Msa0943940:intron 50.0%
GAAATGTTGCTGTCGGTGCA+GGG - chr6_3:20226268-20226287 Msa0943940:intron 50.0%
! GGTAATGGCACACCAATCCT+TGG - chr6_3:20226972-20226991 Msa0943940:intron 50.0%
CTTAGCTCAGTTCGTAGGCA+CGG - chr6_3:20228280-20228299 Msa0943940:intron 50.0%
ACGGGGAAAACCCGTCAAAT+TGG + chr6_3:20228346-20228365 None:intergenic 50.0%
TTTCCCCGTTTGACTGGGTT+TGG - chr6_3:20228357-20228376 Msa0943940:intron 50.0%
TTCCCCGTTTGACTGGGTTT+GGG - chr6_3:20228358-20228377 Msa0943940:intron 50.0%
TACCCAAACCCAGTCAAACG+GGG + chr6_3:20228363-20228382 None:intergenic 50.0%
CGTTTGACTGGGTTTGGGTA+TGG - chr6_3:20228363-20228382 Msa0943940:intron 50.0%
GTTTGTGTATGGGTTCGAGG+TGG + chr6_3:20228449-20228468 None:intergenic 50.0%
CGAGTTTGTGTATGGGTTCG+AGG + chr6_3:20228452-20228471 None:intergenic 50.0%
ATCCCCGTTGGATATGGGTA+GGG - chr6_3:20228749-20228768 Msa0943940:intron 50.0%
TACCCTACCCATATCCAACG+GGG + chr6_3:20228754-20228773 None:intergenic 50.0%
ATTAAGTATGGGGACGGGGA+AGG - chr6_3:20228792-20228811 Msa0943940:intron 50.0%
GATAGACATGACAATGGGGC+GGG + chr6_3:20228834-20228853 None:intergenic 50.0%
GACCCACCGAAAGGAACAAT+GGG + chr6_3:20229310-20229329 None:intergenic 50.0%
GAAGAGAGAGAAGACAGCTG+GGG + chr6_3:20229463-20229482 None:intergenic 50.0%
ACTAGTGATGTTGCCGCGAT+CGG + chr6_3:20230007-20230026 None:intergenic 50.0%
GGGTTACATTAAGGGACGGA+GGG + chr6_3:20230042-20230061 None:intergenic 50.0%
AATCAAACTGACTGGGACGG+AGG - chr6_3:20231191-20231210 Msa0943940:intron 50.0%
ATCAAACTGACTGGGACGGA+GGG - chr6_3:20231192-20231211 Msa0943940:intron 50.0%
TCAGGCCAACTCTTCAACCA+TGG - chr6_3:20231716-20231735 Msa0943940:intron 50.0%
ATCGTAAACACGGTGACACG+TGG - chr6_3:20232607-20232626 Msa0943940:CDS 50.0%
CACTTCCGACAAAAATGCCG+AGG + chr6_3:20233102-20233121 None:intergenic 50.0%
CATAGATATTGGACTGCCGG+TGG - chr6_3:20233123-20233142 Msa0943940:intron 50.0%
! AGAAACGTTCCTTTCGGTGC+AGG - chr6_3:20233153-20233172 Msa0943940:intron 50.0%
! GAAACGTTCCTTTCGGTGCA+GGG - chr6_3:20233154-20233173 Msa0943940:intron 50.0%
CGCCACATGATTGTAGCTTC+CGG - chr6_3:20233210-20233229 Msa0943940:intron 50.0%
CACCGGAAGCTACAATCATG+TGG + chr6_3:20233215-20233234 None:intergenic 50.0%
CACATGATTGTAGCTTCCGG+TGG - chr6_3:20233213-20233232 Msa0943940:intron 50.0%
CTCTTCTACCGAATCTGCTG+TGG - chr6_3:20233266-20233285 Msa0943940:intron 50.0%
! CCGAATCTGCTGTGGTTTTC+AGG - chr6_3:20233274-20233293 Msa0943940:intron 50.0%
TGGCACCACTGCATTGAACT+AGG + chr6_3:20233642-20233661 None:intergenic 50.0%
CAAGGATCGGTGATCCATAC+CGG + chr6_3:20233800-20233819 None:intergenic 50.0%
CAACTCCGACAGAAATGCCG+AGG + chr6_3:20226216-20226235 None:intergenic 55.0%
ACTGGCGGTCGGAATTCCAT+CGG + chr6_3:20226346-20226365 None:intergenic 55.0%
GTGACGAACGGTCATACTCG+AGG - chr6_3:20226600-20226619 Msa0943940:intron 55.0%
AGAGCTACCCTGCACCTTCA+TGG - chr6_3:20226667-20226686 Msa0943940:intron 55.0%
GGCAACAAAACCCATACCCG+CGG - chr6_3:20228301-20228320 Msa0943940:intron 55.0%
!! TTGGTTCGGGTGGTTAACCG+CGG + chr6_3:20228321-20228340 None:intergenic 55.0%
! ACGGGTTTTCCCCGTTTGAC+TGG - chr6_3:20228351-20228370 Msa0943940:intron 55.0%
! CGGGTTTTCCCCGTTTGACT+GGG - chr6_3:20228352-20228371 Msa0943940:intron 55.0%
!! AGGACGGGTGACGGGTATAT+AGG - chr6_3:20228420-20228439 Msa0943940:intron 55.0%
TATCTCATCTCCGTCCCCGA+CGG + chr6_3:20228720-20228739 None:intergenic 55.0%
CATCCCCGTTGGATATGGGT+AGG - chr6_3:20228748-20228767 Msa0943940:intron 55.0%
TGGCCCATTGTTCCTTTCGG+TGG - chr6_3:20229304-20229323 Msa0943940:intron 55.0%
GGCCCATTGTTCCTTTCGGT+GGG - chr6_3:20229305-20229324 Msa0943940:intron 55.0%
GGACCCACCGAAAGGAACAA+TGG + chr6_3:20229311-20229330 None:intergenic 55.0%
ACGGTGGAGCTTCGTGATTC+AGG + chr6_3:20229523-20229542 None:intergenic 55.0%
GGGGTTACATTAAGGGACGG+AGG + chr6_3:20230043-20230062 None:intergenic 55.0%
TCCTATTACTCCCTCCGTCC+CGG - chr6_3:20230990-20231009 Msa0943940:intron 55.0%
GTCAGATATTCCGGGACGGA+GGG + chr6_3:20231003-20231022 None:intergenic 55.0%
AGTCAGATATTCCGGGACGG+AGG + chr6_3:20231004-20231023 None:intergenic 55.0%
! TTCCTTTCGGTGCAGGGAGA+CGG - chr6_3:20233160-20233179 Msa0943940:intron 55.0%
CGGTATGGATCACCGATCCT+TGG - chr6_3:20233798-20233817 Msa0943940:CDS 55.0%
TTGCTGTCGGTGCAGGGAGA+CGG - chr6_3:20226274-20226293 Msa0943940:intron 60.0%
! GGTGCAGGGTAGCTCTGCAT+AGG + chr6_3:20226663-20226682 None:intergenic 60.0%
GGGTGGTTAACCGCGGGTAT+GGG + chr6_3:20228314-20228333 None:intergenic 60.0%
! TGGTTCGGGTGGTTAACCGC+GGG + chr6_3:20228320-20228339 None:intergenic 60.0%
! CACGGGTTTAGGACGGGTGA+CGG - chr6_3:20228411-20228430 Msa0943940:intron 60.0%
! ACGGGTTTAGGACGGGTGAC+GGG - chr6_3:20228412-20228431 Msa0943940:intron 60.0%
GCGGGTATACCCAAACCCGT+CGG - chr6_3:20228701-20228720 Msa0943940:intron 60.0%
CGGGTATACCCAAACCCGTC+GGG - chr6_3:20228702-20228721 Msa0943940:intron 60.0%
GGGTATACCCAAACCCGTCG+GGG - chr6_3:20228703-20228722 Msa0943940:intron 60.0%
ATACCCAAACCCGTCGGGGA+CGG - chr6_3:20228707-20228726 Msa0943940:intron 60.0%
ATCTCATCTCCGTCCCCGAC+GGG + chr6_3:20228719-20228738 None:intergenic 60.0%
ACAATGGGGCGGGATGGAGA+CGG + chr6_3:20228824-20228843 None:intergenic 60.0%
GACATGACAATGGGGCGGGA+TGG + chr6_3:20228830-20228849 None:intergenic 60.0%
GAGAAAGGGGACCCACCGAA+AGG + chr6_3:20229319-20229338 None:intergenic 60.0%
AAGACAGCTGGGGTGGTGAC+AGG + chr6_3:20229453-20229472 None:intergenic 60.0%
GAGAGAGAAGACAGCTGGGG+TGG + chr6_3:20229460-20229479 None:intergenic 60.0%
GGGACGGAAGGAGTAGCTGA+AGG - chr6_3:20230307-20230326 Msa0943940:intron 60.0%
TCCGGGACGGAGGGAGTAAT+AGG + chr6_3:20230994-20231013 None:intergenic 60.0%
TTCCGTCTCCCTGCACCGAA+AGG + chr6_3:20233165-20233184 None:intergenic 60.0%
CGGGTGGTTAACCGCGGGTA+TGG + chr6_3:20228315-20228334 None:intergenic 65.0%
TCAATGCGGGGACGGGGATG+CGG - chr6_3:20228679-20228698 Msa0943940:intron 65.0%
! TCTCCGTCCCCGACGGGTTT+GGG + chr6_3:20228713-20228732 None:intergenic 65.0%
! ATCTCCGTCCCCGACGGGTT+TGG + chr6_3:20228714-20228733 None:intergenic 65.0%
CAATGGGGCGGGATGGAGAC+GGG + chr6_3:20228823-20228842 None:intergenic 65.0%
ACAGCTGGGGTGGTGACAGG+TGG + chr6_3:20229450-20229469 None:intergenic 65.0%
!! TGCAGTGGTGTCACGCGCCG+AGG - chr6_3:20226784-20226803 Msa0943940:intron 70.0%
!! GCAGTGGTGTCACGCGCCGA+GGG - chr6_3:20226785-20226804 Msa0943940:intron 70.0%
GTGTCACGCGCCGAGGGTTG+AGG - chr6_3:20226791-20226810 Msa0943940:intron 70.0%
ATGCGGGGACGGGGATGCGG+CGG - chr6_3:20228682-20228701 Msa0943940:intron 75.0%
! TGCGGGGACGGGGATGCGGC+GGG - chr6_3:20228683-20228702 Msa0943940:intron 80.0%
Chromosome Type Strat End Strand Name
chr6_3 gene 20224699 20234055 20224699 ID=Msa0943940;Name=Msa0943940
chr6_3 mRNA 20224699 20234055 20224699 ID=Msa0943940-mRNA-1;Parent=Msa0943940;Name=Msa0943940-mRNA-1;_AED=0.06;_eAED=0.06;_QI=216|0.4|0.5|1|0.4|0.33|6|273|683
chr6_3 exon 20224699 20225904 20224699 ID=Msa0943940-mRNA-1:exon:6029;Parent=Msa0943940-mRNA-1
chr6_3 exon 20227017 20227087 20227017 ID=Msa0943940-mRNA-1:exon:6028;Parent=Msa0943940-mRNA-1
chr6_3 exon 20231782 20232004 20231782 ID=Msa0943940-mRNA-1:exon:6027;Parent=Msa0943940-mRNA-1
chr6_3 exon 20232023 20232255 20232023 ID=Msa0943940-mRNA-1:exon:6026;Parent=Msa0943940-mRNA-1
chr6_3 exon 20232307 20232790 20232307 ID=Msa0943940-mRNA-1:exon:6025;Parent=Msa0943940-mRNA-1
chr6_3 exon 20233732 20234055 20233732 ID=Msa0943940-mRNA-1:exon:6024;Parent=Msa0943940-mRNA-1
chr6_3 five_prime_UTR 20233840 20234055 20233840 ID=Msa0943940-mRNA-1:five_prime_utr;Parent=Msa0943940-mRNA-1
chr6_3 CDS 20233732 20233839 20233732 ID=Msa0943940-mRNA-1:cds;Parent=Msa0943940-mRNA-1
chr6_3 CDS 20232307 20232790 20232307 ID=Msa0943940-mRNA-1:cds;Parent=Msa0943940-mRNA-1
chr6_3 CDS 20232023 20232255 20232023 ID=Msa0943940-mRNA-1:cds;Parent=Msa0943940-mRNA-1
chr6_3 CDS 20231782 20232004 20231782 ID=Msa0943940-mRNA-1:cds;Parent=Msa0943940-mRNA-1
chr6_3 CDS 20227017 20227087 20227017 ID=Msa0943940-mRNA-1:cds;Parent=Msa0943940-mRNA-1
chr6_3 CDS 20224972 20225904 20224972 ID=Msa0943940-mRNA-1:cds;Parent=Msa0943940-mRNA-1
chr6_3 three_prime_UTR 20224699 20224971 20224699 ID=Msa0943940-mRNA-1:three_prime_utr;Parent=Msa0943940-mRNA-1
Gene Sequence

>Msa0943940

ATGAATGGTGAAGGTGACATGTTTGTTAAAGATTCTTCTAGTTTCATGCTCTTTGGTAAGAAGATTCCGGTGAGTTCTTCTCAGATTCAGGCCAATTCTACAACCATGATTTCTTGCAGTAACTCAAAGCATAAAGGAAATGATATGCCTCATACTCAAAACATTGAGAAATCAAAGAATTCTTCTAATGAAGAAAATGAATCAAAAGTGAACACAAGCACTGTGGAAGATAATATGGAAACTAGCAGCACAGATCAAGACAAAGTCCTAAAGAAACCAGACAAGATTGTTCAATGTCCGAGATGCAAAAGTTTCGACACAAAATTTTGTTATTTCAACAACTACAACGTCAATCAACCTCGGCATTTCTGTCGGAGTTGTCACAGATATTGGACCAACGGTGGAACAATGAGAAATGTTGCTGTCGGTGCAGGGAGACGGAAGAACAAACACATAGCTTCTCAATATCGCCACATGATTGTAGTGTCCGATGGAATTCCGACCGCCAGTTTAGAAACCAACGACTCTTCTAGGTACCAACATGGCTCAAATGTTGAATCTGCTGCGGTTTTTAGGTGTTCAAATGATAATGGTTCAATGCTTAATCTTATGAACCACAAGAGAAATGTTGATGCAAGTGGTAACAATTGTAGAGAAAATGGAGAGGAAGAATCATCGTTATGTGTATCGTCTGTGACGAACGGTCATACTCGAGGAAACGAGTTATTCGAATCCGAACAGAATAGGTCTAAACCTATGCAGAGCTACCCTGCACCTTCATGGATAATTCCAATGAATCAAAGTTGGAACAATGTTACTTCTATGATGTGTAACCCTTATGGCATTGATCCTACTTCAATGCAGTGGTGTCACGCGCCGAGGGTTGAGGTTACAAACATTTTCACACCAAACATTGGCTTGCAATTTGTTCCTGCATCAAACAGGAATGGAACACCTTTGTATGGTAGTGGAAATGGAAATGTGTCCATAGGTTCAAATGGTTGCATTTCACCTTCTTCATCTACTACTAGTAATAGTTGTATCTCAGGTGACATGTGTGTTAAAGATTTTAGTATCATGCTCTTTGGAAAGAAGATTCAGGCCAACTCTTCAACCATGAATTCTTGCAGTAACTCAAAGCACAAAGGAAATGAAATGCCTCATATTCAAAACATTGAGAAATCAAAGAATTCTTCTAATGAAGAAAATGAATCAAAAGTTTACACAAGCACTGTGGAAGATAATATGGAAACTAGCAGCACAGATCAAGACAAAGTCCTCAAAAAACCGGACAAGATTGTTCAATGTCCAAGATGCAACAGTTTCAACACGAAATTTTGTTATTTCAATAACTACAATGTCAGTCAACCTCGGCATTTTTGTCGGAAGTGTCATAGATATTGGACTGCCGGTGGAACAATGAGAAACGTTCCTTTCGGTGCAGGGAGACGGAAGAACAAGCAGATAGCTTCTCAATATCGCCACATGATTGTAGCTTCCGGTGGAATTTCAACCTCAAATTCTGAAAGTAACGTCTCTTCTACCGAATCTGCTGTGGTTTTCAGGTGCTCAAATAATAATGGCATTGTCCTAAAATTTGGTCCGGAAAATGCATTTCTCCATGAATCTAACGATTCGATGTTTAATCCTAGAAACCACAAGAGAAATATTGATGCAAGTGTTAATAATTGTAGAGAAAATGGAGATGAAGAATCATCCTTATGTGTATCTTCTGTGACAAATGGTTATACTCGAGGAAACGAGTTATCTGAATCCGAACATAATAGGTCAAAACTATTGCAGAGCTACCTTGCATCTTCATGGATGATTCCATTGAATCAAAGCTTGAACAATGTTCCTTCCATGGTTCAATCTTCAATGCAAATGTGTAACCCTTATGGCGTTGATCCTAGTTCAATGCAGTGGTGCCATATGCCGAACATCTTAAGACCGAACATTGGCTTGCAATTTGTTCCTGAATCATTTAGGAATGGATCAGTTTCAATAGGTTCAAATAATTGTTTTTCGCCTTCTTCATCTACTACTAGCTAG
Protein sequence

>Msa0943940

MNGEGDMFVKDSSSFMLFGKKIPVSSSQIQANSTTMISCSNSKHKGNDMPHTQNIEKSKNSSNEENESKVNTSTVEDNMETSSTDQDKVLKKPDKIVQCPRCKSFDTKFCYFNNYNVNQPRHFCRSCHRYWTNGGTMRNVAVGAGRRKNKHIASQYRHMIVVSDGIPTASLETNDSSRYQHGSNVESAAVFRCSNDNGSMLNLMNHKRNVDASGNNCRENGEEESSLCVSSVTNGHTRGNELFESEQNRSKPMQSYPAPSWIIPMNQSWNNVTSMMCNPYGIDPTSMQWCHAPRVEVTNIFTPNIGLQFVPASNRNGTPLYGSGNGNVSIGSNGCISPSSSTTSNSCISGDMCVKDFSIMLFGKKIQANSSTMNSCSNSKHKGNEMPHIQNIEKSKNSSNEENESKVYTSTVEDNMETSSTDQDKVLKKPDKIVQCPRCNSFNTKFCYFNNYNVSQPRHFCRKCHRYWTAGGTMRNVPFGAGRRKNKQIASQYRHMIVASGGISTSNSESNVSSTESAVVFRCSNNNGIVLKFGPENAFLHESNDSMFNPRNHKRNIDASVNNCRENGDEESSLCVSSVTNGYTRGNELSESEHNRSKLLQSYLASSWMIPLNQSLNNVPSMVQSSMQMCNPYGVDPSSMQWCHMPNILRPNIGLQFVPESFRNGSVSIGSNNCFSPSSSTTS*