AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0879610

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0879610 MtrunA17_Chr8g0347491 96.840 1076 23 4 1 1070 1 1071 0.0 2076
Msa0879610 MtrunA17_Chr7g0249941 55.525 1095 335 29 20 1070 26 1012 0.0 892
Msa0879610 MtrunA17_Chr4g0045881 64.946 465 144 6 617 1066 428 888 0.0 587
Msa0879610 MtrunA17_Chr5g0401291 60.998 441 157 7 616 1048 455 888 1.48e-170 524
Msa0879610 MtrunA17_Chr4g0054001 58.985 473 174 8 609 1070 394 857 9.05e-170 520
Msa0879610 MtrunA17_Chr1g0192111 54.187 406 171 7 625 1024 497 893 3.77e-131 421
Msa0879610 MtrunA17_Chr4g0023611 46.791 483 216 10 616 1066 393 866 1.47e-119 389
Msa0879610 MtrunA17_Chr2g0319201 49.034 414 193 7 623 1024 393 800 8.64e-115 375
Msa0879610 MtrunA17_Chr2g0323071 46.265 415 200 8 623 1024 316 720 1.17e-105 349
Msa0879610 MtrunA17_Chr5g0414941 40.416 433 221 10 622 1025 411 835 3.10e-89 305
Msa0879610 MtrunA17_Chr8g0364331 40.654 428 217 12 625 1025 309 726 4.39e-87 297
Msa0879610 MtrunA17_Chr3g0118231 37.897 409 236 8 622 1024 245 641 1.04e-75 264
Msa0879610 MtrunA17_Chr4g0074091 27.968 379 225 10 625 992 792 1133 4.77e-33 139
Msa0879610 MtrunA17_Chr4g0061111 26.178 382 234 10 626 995 1171 1516 1.93e-31 134
Msa0879610 MtrunA17_Chr1g0150261 24.586 362 228 7 620 971 1359 1685 1.51e-29 127
Msa0879610 MtrunA17_Chr3g0091511 24.719 356 224 8 626 971 1584 1905 7.04e-28 122
Msa0879610 MtrunA17_Chr5g0409151 23.502 217 132 3 757 971 2 186 7.62e-16 79.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0879610 AT3G25500.1 74.227 485 108 5 583 1059 551 1026 0.0 721
Msa0879610 AT2G43800.1 62.791 430 139 6 616 1035 438 856 3.33e-179 546
Msa0879610 AT5G67470.1 56.967 488 178 8 592 1067 420 887 3.87e-167 515
Msa0879610 AT3G05470.1 46.449 521 221 13 545 1024 365 868 4.76e-119 388
Msa0879610 AT5G54650.2 48.926 419 195 6 618 1024 435 846 6.84e-119 388
Msa0879610 AT5G54650.1 48.926 419 195 6 618 1024 435 846 6.84e-119 388
Msa0879610 AT5G48360.1 46.453 437 169 9 592 1026 409 782 1.82e-108 357
Msa0879610 AT3G07540.1 42.529 435 201 6 593 1024 446 834 3.94e-88 302
Msa0879610 AT1G70140.1 38.293 457 234 10 618 1041 298 739 2.97e-83 287
Msa0879610 AT1G59910.1 36.941 425 238 10 617 1024 454 865 1.72e-78 277
Msa0879610 AT3G25493.1 71.795 117 33 0 942 1058 31 147 2.23e-54 186
Msa0879610 AT1G24150.2 42.466 219 105 6 625 833 312 519 6.27e-43 165
Msa0879610 AT5G07740.3 26.893 383 227 9 623 992 1222 1564 4.75e-33 139
Msa0879610 AT5G07740.1 26.893 383 227 9 623 992 1244 1586 4.87e-33 139
Msa0879610 AT5G07740.2 25.180 417 225 10 623 992 1244 1620 7.11e-29 126
Msa0879610 AT1G31810.2 24.607 382 237 9 623 992 816 1158 2.39e-28 124
Msa0879610 AT1G31810.1 24.607 382 237 9 623 992 816 1158 2.39e-28 124
Msa0879610 AT5G07770.2 23.611 360 220 8 643 992 181 495 2.63e-22 103
Msa0879610 AT3G32400.2 23.038 395 246 10 588 971 69 416 8.43e-22 100
Msa0879610 AT5G07760.1 23.355 304 200 5 690 992 523 794 1.65e-20 98.2
Msa0879610 AT5G07760.2 23.355 304 200 5 690 992 523 794 1.86e-20 98.2
Msa0879610 AT2G25050.1 21.573 445 270 13 620 1024 739 1144 4.12e-20 97.4
Msa0879610 AT5G07770.3 22.717 449 256 12 556 992 160 529 2.50e-18 91.3
Msa0879610 AT5G07770.1 22.717 449 256 12 556 992 153 522 3.14e-18 90.9
Msa0879610 AT5G07650.2 22.785 316 213 4 656 971 435 719 3.17e-18 90.9
Msa0879610 AT5G07770.4 22.717 449 256 12 556 992 19 388 1.03e-17 88.6
Msa0879610 AT5G07650.1 22.623 305 181 5 691 971 470 743 3.99e-15 80.9
Msa0879610 AT3G32400.1 24.383 324 202 9 556 851 18 326 6.32e-11 66.6

Find 304 sgRNAs with CRISPR-Local

Find 416 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAACATGAGATGGTAAAATT+TGG 0.159908 6_1:+22217329 None:intergenic
CGGAATTTCAGCTGAGAATT+TGG 0.162169 6_1:-22216349 Msa0879610:CDS
CAGACACCTAACTGCATATT+TGG 0.185975 6_1:+22212780 None:intergenic
CTCAAGCTGGTTGACGTTAA+AGG 0.220743 6_1:-22213586 Msa0879610:CDS
TGAAGGTGGTGGTGGGGTTG+AGG 0.222154 6_1:+22216914 None:intergenic
TTGATGCTTCAACAAAATTA+AGG 0.236522 6_1:-22212836 Msa0879610:three_prime_UTR
CTCCACTTCAGATTCAAAAT+TGG 0.253331 6_1:+22213857 None:intergenic
GTAGTAGAAAATGGGTATTT+TGG 0.269771 6_1:+22216990 None:intergenic
CTCGGTTCATTTGATGAGAT+TGG 0.272451 6_1:+22217110 None:intergenic
CGCCTCCGCAACCAGCTTCT+AGG 0.273342 6_1:-22215687 Msa0879610:CDS
TCAATGGGTTACTGTGATTT+AGG 0.274124 6_1:-22212872 Msa0879610:three_prime_UTR
CATCAAAATCACCTGGTTAA+AGG 0.274808 6_1:+22212701 None:intergenic
CTTGAAGGAGGTTTCAATTC+CGG 0.289182 6_1:+22215406 None:intergenic
GGAGGTGGTGGTGGCGGCGG+TGG 0.293087 6_1:+22215520 None:intergenic
GACTTTGGTTGTGATCTTCT+TGG 0.293641 6_1:+22216216 None:intergenic
GGTGGTGGTGGCGGCGGTGG+AGG 0.295244 6_1:+22215523 None:intergenic
ACTTCTTAACAGTTCTTGAT+AGG 0.298082 6_1:-22213084 Msa0879610:CDS
AAAATCCTTGTAAAAGATTT+GGG 0.302784 6_1:-22212616 Msa0879610:three_prime_UTR
CTAGAGGCCGTGCTCAAAAC+TGG 0.311014 6_1:-22213670 Msa0879610:CDS
ATGCTTCCACAACCACTTCC+TGG 0.318071 6_1:-22212983 Msa0879610:CDS
ACTCTATTAGCAGGTGTAAT+TGG 0.319957 6_1:+22215553 None:intergenic
TGATACATAACCTTCATAAA+AGG 0.321299 6_1:+22212532 None:intergenic
AGAGGTTCTTTGAACGGAAA+TGG 0.329385 6_1:-22216396 Msa0879610:CDS
TTGCGCTCTTCTTCCTTGCT+TGG 0.329564 6_1:+22213996 None:intergenic
AAGCAATTCAAATGGCAAAT+TGG 0.330738 6_1:-22212494 Msa0879610:three_prime_UTR
CAATGCAAAGGCTTCAACTT+TGG 0.331536 6_1:+22215295 None:intergenic
ACTACCATGAAGATTCTAAA+TGG 0.334807 6_1:+22213112 None:intergenic
GAAGGTGGTGGTGGGGTTGA+GGG 0.335139 6_1:+22216915 None:intergenic
GGAGTAGCATCCTTTGGTTT+TGG 0.338452 6_1:+22214937 None:intergenic
GGCAAATTGGAGACAACATT+TGG 0.343834 6_1:-22212481 Msa0879610:three_prime_UTR
TTGGTCAACCGGTGGTTTGT+AGG 0.347205 6_1:-22215432 Msa0879610:CDS
TTCATCTTCTTCTGCTTCAC+CGG 0.347731 6_1:-22216283 Msa0879610:CDS
CAAATTCTCAGCTGAAATTC+CGG 0.348675 6_1:+22216350 None:intergenic
TCAGCAGAACCGAGTTTGTT+TGG 0.349669 6_1:+22213948 None:intergenic
AATGGCGACGGCGAGGAGTT+TGG 0.355283 6_1:+22216812 None:intergenic
AAGGAACGGGCAACTATATA+AGG 0.356397 6_1:-22212352 Msa0879610:three_prime_UTR
AAGGTGGTGGTGGGGTTGAG+GGG 0.359462 6_1:+22216916 None:intergenic
GCCAGTGGAGGTGGAGGTGG+TGG 0.365320 6_1:+22215508 None:intergenic
GAGTTTGGAAGAAGATGATT+TGG 0.367500 6_1:+22216827 None:intergenic
GGTGGAGGTGGTGGTGGCGG+CGG 0.367532 6_1:+22215517 None:intergenic
TCATCCATTTAGAATCTTCA+TGG 0.368202 6_1:-22213116 Msa0879610:CDS
AACAACTCCTGTTGGTCAAC+CGG 0.373070 6_1:-22215443 Msa0879610:CDS
GCTGGTTGCGGAGGCGGTGG+TGG 0.374459 6_1:+22215694 None:intergenic
GGAGGTGGAGGTGGTGGTGG+CGG 0.374914 6_1:+22215514 None:intergenic
TCATCTCCTTAGCGCATGTT+TGG 0.375341 6_1:-22212917 Msa0879610:exon
ATAGTTGCCCGTTCCTTAAC+GGG 0.375493 6_1:+22212358 None:intergenic
AGCATAGGGTTCACTGGAAC+AGG 0.375806 6_1:+22213001 None:intergenic
TCCAATGGAGGGTCCTTAAC+GGG 0.376598 6_1:+22212398 None:intergenic
TTCTTCAATGTCTTCATCTC+CGG 0.378453 6_1:-22216082 Msa0879610:CDS
TTCCGATCGTGAAATGGTTT+GGG 0.379861 6_1:-22215254 Msa0879610:CDS
GTTCCGATCGTGAAATGGTT+TGG 0.383773 6_1:-22215255 Msa0879610:CDS
TTCAAATACATTGGTTTCTC+CGG 0.386226 6_1:-22215362 Msa0879610:CDS
AACATGAGATGGTAAAATTT+GGG 0.393475 6_1:+22217330 None:intergenic
CATTGCTTCCGCTGCTTCAT+CGG 0.394401 6_1:+22215481 None:intergenic
GGTGGGGTTGAGGGGTATGT+AGG 0.396440 6_1:+22216924 None:intergenic
GAAGAAGGTGAAGGTGGTGG+TGG 0.397218 6_1:+22216906 None:intergenic
ACTCCTCGCCGTCGCCATTA+CGG 0.398244 6_1:-22216808 Msa0879610:CDS
TATAGTTGCCCGTTCCTTAA+CGG 0.398665 6_1:+22212357 None:intergenic
CTAGAAGCTGGTTGCGGAGG+CGG 0.399204 6_1:+22215688 None:intergenic
ACGGAAATGGGTCGGGTTCT+CGG 0.401902 6_1:-22216383 Msa0879610:CDS
ACAGTTGGTGATTCAGCAAT+TGG 0.406410 6_1:+22215634 None:intergenic
GCAATTGGTGTTAACAAGTC+AGG 0.418269 6_1:+22215649 None:intergenic
CTCCAATGGAGGGTCCTTAA+CGG 0.418414 6_1:+22212397 None:intergenic
CAACCACTTCCTGGATTACA+TGG 0.421232 6_1:-22212974 Msa0879610:CDS
AGTGGAGGTGGAGGTGGTGG+TGG 0.422015 6_1:+22215511 None:intergenic
GTTAGAGATGAAATGTTAGC+TGG 0.426511 6_1:+22216870 None:intergenic
GGTTGCGGAGGCGGTGGTGG+TGG 0.429065 6_1:+22215697 None:intergenic
TTGAGTCCCCGTTAAGGAAC+GGG 0.429080 6_1:-22212365 Msa0879610:three_prime_UTR
GGGTCATGGAGGGTGCGTTA+TGG 0.432169 6_1:-22212678 Msa0879610:three_prime_UTR
GAGAGAGTAGAGAGTGATGA+AGG 0.433001 6_1:+22217243 None:intergenic
GAACGTGGAGTAGCATCCTT+TGG 0.434256 6_1:+22214931 None:intergenic
AAAGTTGAAGCCTTTGCATT+GGG 0.434876 6_1:-22215293 Msa0879610:CDS
CCACGTGGCGCCGGTGGTGG+TGG 0.435858 6_1:-22216558 Msa0879610:CDS
ATCGGCATTGCCAGTGGAGG+TGG 0.436024 6_1:+22215499 None:intergenic
GGCGGTAACGGCTGTAGCTC+CGG 0.439758 6_1:+22216510 None:intergenic
GGTTGATGAAGGAATCTTCT+CGG 0.443152 6_1:+22217092 None:intergenic
CTTCTTCACATTCGCTAGAT+CGG 0.443176 6_1:+22213399 None:intergenic
GAGGTTCTTTGAACGGAAAT+GGG 0.443783 6_1:-22216395 Msa0879610:CDS
CCACCGGCGCCACGTGGATC+AGG 0.444587 6_1:+22216564 None:intergenic
GGAAGAAGAGCGCAAATTGA+AGG 0.444590 6_1:-22213988 Msa0879610:CDS
GAAGAAGAAGATGAAGTGTT+GGG 0.445687 6_1:+22216963 None:intergenic
GGCTAGTTCCGATCGTGAAA+TGG 0.446015 6_1:-22215260 Msa0879610:CDS
TGCAACACAAAAGGCCTTGA+AGG 0.446280 6_1:+22215391 None:intergenic
ATGGAGGGTGCGTTATGGTC+TGG 0.447271 6_1:-22212673 Msa0879610:three_prime_UTR
AAATGGTTTGGGATCATTTG+AGG 0.449038 6_1:-22215243 Msa0879610:CDS
ATTGCCAGTGGAGGTGGAGG+TGG 0.449780 6_1:+22215505 None:intergenic
GTAATTGGTGTTGAAAGAAC+AGG 0.452574 6_1:+22215568 None:intergenic
CGGAATTGAAACCTCCTTCA+AGG 0.453324 6_1:-22215405 Msa0879610:CDS
ATGAATCTTCATAGCAATCA+TGG 0.453942 6_1:-22215841 Msa0879610:CDS
TTTGGATTTGGTGATGGAGG+TGG 0.455463 6_1:+22217008 None:intergenic
ACCACCACCTCCACCTCCAC+TGG 0.457782 6_1:-22215509 Msa0879610:CDS
AATCAATGAACAAGTTTATG+AGG 0.460163 6_1:-22213246 Msa0879610:CDS
GAAGGAGTTTGCAACACAAA+AGG 0.463090 6_1:+22215382 None:intergenic
TCTTCGGAGTTTCTTTACCT+TGG 0.463799 6_1:-22216618 Msa0879610:CDS
CAAAGTTGAAGCCTTTGCAT+TGG 0.465268 6_1:-22215294 Msa0879610:CDS
AAGACCAAGTCTTCTGCACT+TGG 0.465976 6_1:+22213444 None:intergenic
ACAAGGACCACTCCCCGTTA+AGG 0.467855 6_1:-22212411 Msa0879610:three_prime_UTR
TTTCCGTTCAAAGAACCTCT+TGG 0.467984 6_1:+22216399 None:intergenic
AGTGAGTTAGATAGAATCAA+TGG 0.468327 6_1:-22212888 Msa0879610:three_prime_UTR
CTATTAAGAGCATCTCCAAT+GGG 0.468521 6_1:-22212447 Msa0879610:three_prime_UTR
GAAGTCTCTAAACTTTCAAA+AGG 0.468986 6_1:-22213343 Msa0879610:CDS
CAAACCACCGGTTGACCAAC+AGG 0.469210 6_1:+22215436 None:intergenic
GAAGCTGGTTGCGGAGGCGG+TGG 0.470974 6_1:+22215691 None:intergenic
TGTGTACAAAGCAATTCAAA+TGG 0.476638 6_1:-22212502 Msa0879610:three_prime_UTR
AAACTAGGTGGTAACTCAAC+CGG 0.476660 6_1:+22215343 None:intergenic
AAGAAGGTGAAGGTGGTGGT+GGG 0.477077 6_1:+22216907 None:intergenic
TCTTTGAACGGAAATGGGTC+GGG 0.477096 6_1:-22216390 Msa0879610:CDS
TTCTTTGAACGGAAATGGGT+CGG 0.479986 6_1:-22216391 Msa0879610:CDS
TCTGAAACATCAGAAATTGT+TGG 0.480351 6_1:+22215805 None:intergenic
GCAAACTCCTTCAAATACAT+TGG 0.480573 6_1:-22215371 Msa0879610:CDS
GATGATAGAAACATTATTTG+TGG 0.481950 6_1:-22214974 Msa0879610:CDS
GCTTCGAGCGGTTAATGTTA+CGG 0.484806 6_1:-22214839 Msa0879610:CDS
AACCAGCTTCTAGGAAGCAT+TGG 0.485263 6_1:-22215678 Msa0879610:CDS
GCGATTCCAAATATGCAGTT+AGG 0.485381 6_1:-22212786 Msa0879610:three_prime_UTR
CTCTCTCCTGAGTAACTAAC+GGG 0.485509 6_1:-22212324 Msa0879610:three_prime_UTR
GGTGATGGAGGTGGTGATGA+AGG 0.487698 6_1:+22217017 None:intergenic
TGTCGCATAAGCGGCGGTAA+CGG 0.487975 6_1:+22216498 None:intergenic
GTGGGGTTGAGGGGTATGTA+GGG 0.489242 6_1:+22216925 None:intergenic
GATAGGGTATGTAAAGAAGT+TGG 0.489334 6_1:-22213067 Msa0879610:CDS
GTGGCGCCGGTGGTGGTGGT+CGG 0.490605 6_1:-22216554 Msa0879610:CDS
GGAGAAACCAATGTATTTGA+AGG 0.494248 6_1:+22215364 None:intergenic
GGCGGCGATGACGGCCGTAA+TGG 0.497226 6_1:+22216794 None:intergenic
TTCTCGATTTAGCGACGGTA+GGG 0.498089 6_1:+22216646 None:intergenic
TGTAATCCAGGAAGTGGTTG+TGG 0.499250 6_1:+22212977 None:intergenic
CTTCTTAACAGTTCTTGATA+GGG 0.499816 6_1:-22213083 Msa0879610:CDS
ACTCAATCTTGTAATGAAGA+TGG 0.500417 6_1:-22215961 Msa0879610:CDS
CGATCTAGCGAATGTGAAGA+AGG 0.502743 6_1:-22213398 Msa0879610:CDS
ACCCTATCCTCGTGACTTGG+AGG 0.502964 6_1:+22214898 None:intergenic
GGTTGACCAACAGGAGTTGT+TGG 0.504807 6_1:+22215445 None:intergenic
GATCCACGTGGCGCCGGTGG+TGG 0.504808 6_1:-22216561 Msa0879610:CDS
CTACCTGATCCACGTGGCGC+CGG 0.505864 6_1:-22216567 Msa0879610:CDS
AAACCCTTACTTAAAAGAGC+TGG 0.505939 6_1:+22215219 None:intergenic
GACAGCGACGGCGGCGATGA+CGG 0.506397 6_1:+22216785 None:intergenic
GGCATTGCCAGTGGAGGTGG+AGG 0.507694 6_1:+22215502 None:intergenic
ACCAGCTTCTAGGAAGCATT+GGG 0.509100 6_1:-22215677 Msa0879610:CDS
GTAAAATTGAATCAAACTGC+GGG 0.510252 6_1:-22213298 Msa0879610:CDS
ACTGGGAACCGCATGAATGT+TGG 0.511036 6_1:-22213652 Msa0879610:CDS
TTTCCATGTAATCCAGGAAG+TGG 0.512207 6_1:+22212971 None:intergenic
CCCCGTTAAGGACCCTCCAT+TGG 0.513158 6_1:-22212399 Msa0879610:three_prime_UTR
GGCGTTTACTTTACCATCGC+CGG 0.513346 6_1:-22215878 Msa0879610:CDS
AATACCCTATCCTCGTGACT+TGG 0.513434 6_1:+22214895 None:intergenic
TCTTCATTCTCCTCAAAACT+AGG 0.514159 6_1:+22215328 None:intergenic
AAGTCACGAGGATAGGGTAT+TGG 0.515638 6_1:-22214893 Msa0879610:CDS
TCCCAATGCTTCCTAGAAGC+TGG 0.515895 6_1:+22215676 None:intergenic
TCATCTTCTTCTGCTTCACC+GGG 0.516704 6_1:-22216282 Msa0879610:CDS
CGATGAAGCAGCGGAAGCAA+TGG 0.518498 6_1:-22215480 Msa0879610:CDS
GGAGGGTCCTTAACGGGGAG+TGG 0.522087 6_1:+22212404 None:intergenic
TGTCTCTTTCCATGTAATCC+AGG 0.522444 6_1:+22212965 None:intergenic
TGCTTCCTAGAAGCTGGTTG+CGG 0.522899 6_1:+22215682 None:intergenic
TGAATTCCGACCACCACCAC+CGG 0.523389 6_1:+22216548 None:intergenic
GGAAGTGGTTGTGGAAGCAT+AGG 0.525174 6_1:+22212986 None:intergenic
AGTAGTGGCTGTGTCGGTGC+CGG 0.525966 6_1:+22216174 None:intergenic
CAAGAAATCATTAGAACAGA+AGG 0.526066 6_1:-22213526 Msa0879610:CDS
TAAATCGAGAAACGTTTCTT+CGG 0.526566 6_1:-22216634 Msa0879610:CDS
GGAGCTGAAACTCTATTAGC+AGG 0.528162 6_1:+22215544 None:intergenic
GATGCCAAGTGCAGAAGACT+TGG 0.528209 6_1:-22213448 Msa0879610:CDS
TGTGGAAGCATAGGGTTCAC+TGG 0.528253 6_1:+22212995 None:intergenic
AGAAGAAGAAGATGAAGTGT+TGG 0.528262 6_1:+22216962 None:intergenic
GAAAGAAGCGTTGGTGAAAG+TGG 0.528287 6_1:+22215751 None:intergenic
CCTGATCCACGTGGCGCCGG+TGG 0.528780 6_1:-22216564 Msa0879610:CDS
TCTCCAAGAGGTTCTTTGAA+CGG 0.529792 6_1:-22216402 Msa0879610:CDS
AGCGGTTAATGTTACGGTAG+AGG 0.530275 6_1:-22214833 Msa0879610:CDS
GGAGTGGTCCTTGTTAAGTA+AGG 0.533286 6_1:+22212420 None:intergenic
TTCGATCAGTCTCTCTCCAC+CGG 0.533928 6_1:-22216250 Msa0879610:CDS
AAGGAAGAAGGTGAAGGTGG+TGG 0.534529 6_1:+22216903 None:intergenic
TGGTAAAATTTGGGTAATGG+TGG 0.534827 6_1:+22217339 None:intergenic
CACCTCCAAGTCACGAGGAT+AGG 0.534967 6_1:-22214900 Msa0879610:CDS
ACCTCCAAGTCACGAGGATA+GGG 0.535294 6_1:-22214899 Msa0879610:CDS
AATGAACAAGTTTATGAGGA+TGG 0.535360 6_1:-22213242 Msa0879610:CDS
AGATGGTAAAATTTGGGTAA+TGG 0.537096 6_1:+22217336 None:intergenic
TTAGTGTCACTGTGACATCT+TGG 0.537792 6_1:-22212748 Msa0879610:three_prime_UTR
GATGAAGCAGCGGAAGCAAT+GGG 0.538647 6_1:-22215479 Msa0879610:CDS
GTAATAAAATGTGTACTACT+TGG 0.539053 6_1:-22212285 Msa0879610:three_prime_UTR
TGTGAAGAAGGCCGCGACAA+TGG 0.539842 6_1:-22213386 Msa0879610:CDS
GGAAAGAAGAGAGTGTGAAA+AGG 0.539959 6_1:+22217296 None:intergenic
TTTGTGGAAAAGGTTGATGA+AGG 0.542138 6_1:+22217081 None:intergenic
ACAGGTGTTACTGATACACT+TGG 0.542268 6_1:-22214053 Msa0879610:intron
CGTTAAGGACCCTCCATTGG+AGG 0.542327 6_1:-22212396 Msa0879610:three_prime_UTR
AATTTCAGCTGAGAATTTGG+TGG 0.542465 6_1:-22216346 Msa0879610:CDS
TGTTTCTCAGAGAAAACAAT+GGG 0.545960 6_1:-22215596 Msa0879610:CDS
GCAAAGGAAGAAGGTGAAGG+TGG 0.547065 6_1:+22216900 None:intergenic
ACCGGTGGTTTGTAGGCCGC+CGG 0.547405 6_1:-22215425 Msa0879610:CDS
GGTGGTGCTACTGTTACTGC+TGG 0.548803 6_1:-22216450 Msa0879610:CDS
TCTATGAGCAGAACTAATCA+TGG 0.548946 6_1:+22213027 None:intergenic
CAATTTCTGATGTTTCAGAT+CGG 0.552148 6_1:-22215801 Msa0879610:CDS
AATTGGGTGCAGGTTGAATG+AGG 0.552324 6_1:-22214998 Msa0879610:intron
AGAAGGTGAAGGTGGTGGTG+GGG 0.552621 6_1:+22216908 None:intergenic
AGACGGTGACTTACATTCTC+CGG 0.553919 6_1:+22216047 None:intergenic
TTAGAGATGAAATGTTAGCT+GGG 0.555490 6_1:+22216871 None:intergenic
CTTTACCTCTAGAGTCTGAA+AGG 0.557119 6_1:+22213821 None:intergenic
GTGAGTTAGATAGAATCAAT+GGG 0.558277 6_1:-22212887 Msa0879610:three_prime_UTR
GGAAGTGTGTGAAGCACTGT+TGG 0.558493 6_1:-22214812 Msa0879610:CDS
TGCTTCATCGGCATTGCCAG+TGG 0.558910 6_1:+22215493 None:intergenic
CCACTACTTGTTAATGACGT+TGG 0.559691 6_1:-22216159 Msa0879610:CDS
TTATTACTTCTTTATGCAAG+TGG 0.560226 6_1:+22212260 None:intergenic
TCCGGCGATGAAAGAAGCGT+TGG 0.561706 6_1:+22215742 None:intergenic
ATTTCAGCTGAGAATTTGGT+GGG 0.562793 6_1:-22216345 Msa0879610:CDS
GGGAATGAAGCAAAGGAAGA+AGG 0.563340 6_1:+22216891 None:intergenic
TATTACTTCTTTATGCAAGT+GGG 0.564425 6_1:+22212261 None:intergenic
ATCCCAAACCATTTCACGAT+CGG 0.564571 6_1:+22215252 None:intergenic
GCTCGATACACTTCTCAAGC+TGG 0.564612 6_1:-22213599 Msa0879610:CDS
GGTGGTGATGAAGGAGGTGA+TGG 0.564813 6_1:+22217026 None:intergenic
CAAAGCTCGATGTACGATGA+AGG 0.566959 6_1:-22216477 Msa0879610:CDS
TAGAGGCCGTGCTCAAAACT+GGG 0.567552 6_1:-22213669 Msa0879610:CDS
TCTTCATAGCAATCATGGGT+TGG 0.568916 6_1:-22215836 Msa0879610:CDS
CTAGAAGCATTCGATAATCT+CGG 0.569242 6_1:+22215928 None:intergenic
GACTTCGCTCGTGAGGACTT+CGG 0.569518 6_1:+22213360 None:intergenic
TCGTCACTCAATGTTGCGCT+CGG 0.570493 6_1:+22213469 None:intergenic
GTTAGTTACTCAGGAGAGAG+AGG 0.570925 6_1:+22212327 None:intergenic
ACCAACGCTTCTTTCATCGC+CGG 0.572966 6_1:-22215743 Msa0879610:CDS
TTCCTAGAAGCTGGTTGCGG+AGG 0.574345 6_1:+22215685 None:intergenic
GTGGGACCCGTTAGTTACTC+AGG 0.575354 6_1:+22212318 None:intergenic
ATTGAGTCCCCGTTAAGGAA+CGG 0.577014 6_1:-22212366 Msa0879610:three_prime_UTR
CTTTGCATTGGGATAAAGTG+AGG 0.577902 6_1:-22215282 Msa0879610:CDS
GTGCTCATTATATCTCTCTC+CGG 0.580272 6_1:+22215724 None:intergenic
GCTATTAAGAGCATCTCCAA+TGG 0.580646 6_1:-22212448 Msa0879610:three_prime_UTR
AAGAAGAAGATGAAGTGTTG+GGG 0.580875 6_1:+22216964 None:intergenic
GTTTATGAGGATGGCTGAGG+AGG 0.581248 6_1:-22213233 Msa0879610:CDS
TTCGTCGGTGAAAGATTCAA+CGG 0.583773 6_1:+22216018 None:intergenic
GTGTGTGAAGCACTGTTGGA+AGG 0.583862 6_1:-22214808 Msa0879610:intron
CGTCTCTTCCCTCGCGACGG+TGG 0.583926 6_1:-22216672 Msa0879610:CDS
TCTCTCTCCTGAGTAACTAA+CGG 0.587505 6_1:-22212325 Msa0879610:three_prime_UTR
AGAAGAAGATGAAGTGTTGG+GGG 0.587835 6_1:+22216965 None:intergenic
AAGATCACAACCAAAGTCGC+CGG 0.588309 6_1:-22216211 Msa0879610:CDS
ATCGAGCTTTGTCGCATAAG+CGG 0.588627 6_1:+22216489 None:intergenic
ATCATCGTCTTCTTCATCGT+CGG 0.589871 6_1:-22215899 Msa0879610:CDS
CAAGTTTATGAGGATGGCTG+AGG 0.589924 6_1:-22213236 Msa0879610:CDS
CCAACGTCATTAACAAGTAG+TGG 0.591694 6_1:+22216159 None:intergenic
GCCGGAAAATGTTGTAACTC+CGG 0.592070 6_1:-22216193 Msa0879610:CDS
AAAGAGACATTACAGTTCCT+CGG 0.592779 6_1:-22212951 Msa0879610:CDS
ACAAAATTAAGGTGCTATCG+TGG 0.597187 6_1:-22212825 Msa0879610:three_prime_UTR
GTTTAGAGACTTCGCTCGTG+AGG 0.598816 6_1:+22213353 None:intergenic
GAAGGAGGTGATGGTGAAGG+AGG 0.598971 6_1:+22217035 None:intergenic
CCAACAGGAGTTGTTGGAGA+AGG 0.599161 6_1:+22215451 None:intergenic
GTTAGCTGGGAATGAAGCAA+AGG 0.599604 6_1:+22216884 None:intergenic
TGGCAATGCCGATGAAGCAG+CGG 0.603767 6_1:-22215489 Msa0879610:CDS
TGAGATTGCGACGACAGCGA+CGG 0.605214 6_1:+22216773 None:intergenic
ATTCGTCTCTTCCCTCGCGA+CGG 0.606037 6_1:-22216675 Msa0879610:CDS
GATGAAGGAGGTGATGGTGA+AGG 0.606651 6_1:+22217032 None:intergenic
CTCACTTTATCCCAATGCAA+AGG 0.607976 6_1:+22215283 None:intergenic
TAAATCCTTTCAGACTCTAG+AGG 0.608370 6_1:-22213826 Msa0879610:intron
TCGATGTACGATGAAGGTAA+TGG 0.608976 6_1:-22216471 Msa0879610:CDS
CTTCTTGGACTCAAACTCAC+CGG 0.609186 6_1:+22216231 None:intergenic
GTTGACGTTAAAGGTGCAGA+TGG 0.609955 6_1:-22213577 Msa0879610:CDS
TGAATCTTCATAGCAATCAT+GGG 0.610122 6_1:-22215840 Msa0879610:CDS
GCGGATCCAAACATGCGCTA+AGG 0.610792 6_1:+22212911 None:intergenic
TTAACAAGTAGTGGCTGTGT+CGG 0.611368 6_1:+22216168 None:intergenic
GATGGAGGTGGTGATGAAGG+AGG 0.611563 6_1:+22217020 None:intergenic
CCTTCTCCAACAACTCCTGT+TGG 0.612388 6_1:-22215451 Msa0879610:CDS
AACACAAAAGGCCTTGAAGG+AGG 0.613056 6_1:+22215394 None:intergenic
GAAGGAGGTTTCAATTCCGG+CGG 0.613492 6_1:+22215409 None:intergenic
GAAGTGGTTGTGGAAGCATA+GGG 0.615204 6_1:+22212987 None:intergenic
GAAGAGACGAATACTACTGT+CGG 0.617100 6_1:+22216686 None:intergenic
GGTACTATTGCTAACTCTCG+TGG 0.617399 6_1:-22216597 Msa0879610:CDS
AACTCCTGTTGGTCAACCGG+TGG 0.617457 6_1:-22215440 Msa0879610:CDS
TGTAAAATTGAATCAAACTG+CGG 0.617720 6_1:-22213299 Msa0879610:CDS
TAGGGACGCCACCGTCGCGA+GGG 0.619280 6_1:+22216664 None:intergenic
GATGACGGCCGTAATGGCGA+CGG 0.620399 6_1:+22216800 None:intergenic
TGATTCTGCGAATTTACGAA+CGG 0.620646 6_1:+22213264 None:intergenic
GTAGGGACGCCACCGTCGCG+AGG 0.621384 6_1:+22216663 None:intergenic
TCTCCGGAGAAAATCTTCGC+CGG 0.621785 6_1:-22216066 Msa0879610:CDS
TTCATCGGCATTGCCAGTGG+AGG 0.621823 6_1:+22215496 None:intergenic
TACACCAAATCCAAAACCAA+AGG 0.622056 6_1:-22214947 Msa0879610:CDS
GATGGTGAAGGAGGTTGTGA+AGG 0.623251 6_1:+22217044 None:intergenic
TTTGCATTGGGATAAAGTGA+GGG 0.623532 6_1:-22215281 Msa0879610:CDS
AATGTTCTTGAAGCTTCTAG+AGG 0.625174 6_1:-22213686 Msa0879610:CDS
CCACCACCACCGGCGCCACG+TGG 0.625191 6_1:+22216558 None:intergenic
TTTCTCGATTTAGCGACGGT+AGG 0.625639 6_1:+22216645 None:intergenic
TCCGGCGGCCTACAAACCAC+CGG 0.626956 6_1:+22215424 None:intergenic
ATGAATGTTGGAACAAATCG+AGG 0.627492 6_1:-22213640 Msa0879610:CDS
AGATTCAACGGTGATAAAGA+CGG 0.631157 6_1:+22216030 None:intergenic
CCGTTCTGAATCAAAACAGT+TGG 0.633306 6_1:+22215619 None:intergenic
GACGACTCTCCAAACAAACT+CGG 0.633316 6_1:-22213957 Msa0879610:CDS
GAAGCAAAGGAAGAAGGTGA+AGG 0.634591 6_1:+22216897 None:intergenic
ATGACCCCATCAAAATCACC+TGG 0.636716 6_1:+22212694 None:intergenic
GAAGAAGATGAAGTGTTGGG+GGG 0.638653 6_1:+22216966 None:intergenic
ATTAAGAGCATCTCCAATGG+GGG 0.639987 6_1:-22212445 Msa0879610:three_prime_UTR
TATTGCTATCTTGCTTCGAG+CGG 0.641001 6_1:-22214851 Msa0879610:CDS
GAAAGTGGCAATGATGAAAG+AGG 0.642013 6_1:+22215766 None:intergenic
GACTTCGGAGTCCATTGTCG+CGG 0.643223 6_1:+22213375 None:intergenic
GATTTGTTCCAACATTCATG+CGG 0.646426 6_1:+22213644 None:intergenic
CCAATGGAGGGTCCTTAACG+GGG 0.647949 6_1:+22212399 None:intergenic
TTAGTTACTCAGGAGAGAGA+GGG 0.648431 6_1:+22212328 None:intergenic
GATTGCGACGACAGCGACGG+CGG 0.649008 6_1:+22216776 None:intergenic
AAGTTGGTAATATAAATGAA+AGG 0.649106 6_1:-22213051 Msa0879610:CDS
AACGTTTCTCGATTTAGCGA+CGG 0.654326 6_1:+22216641 None:intergenic
TAGTTGCCCGTTCCTTAACG+GGG 0.654399 6_1:+22212359 None:intergenic
TATTAAGAGCATCTCCAATG+GGG 0.655111 6_1:-22212446 Msa0879610:three_prime_UTR
AGATTATCGAATGCTTCTAG+TGG 0.659854 6_1:-22215925 Msa0879610:CDS
CTTGGACTCAAACTCACCGG+TGG 0.662936 6_1:+22216234 None:intergenic
GTGTTTCTCAGAGAAAACAA+TGG 0.669343 6_1:-22215597 Msa0879610:CDS
AGATGAACTATCATCATCCG+AGG 0.672198 6_1:+22212934 None:intergenic
CGGCCGTAATGGCGACGGCG+AGG 0.672765 6_1:+22216805 None:intergenic
AAGAACAAGACTGCACGTGA+CGG 0.682308 6_1:+22216100 None:intergenic
TTAAGAGCATCTCCAATGGG+GGG 0.690619 6_1:-22212444 Msa0879610:three_prime_UTR
CTGATCGAATGAGAACGACC+CGG 0.693335 6_1:+22216264 None:intergenic
ATGTACGATGAAGGTAATGG+TGG 0.698028 6_1:-22216468 Msa0879610:CDS
TCATTCTCCTCAAAACTAGG+TGG 0.700909 6_1:+22215331 None:intergenic
GAGCTTTGTCGCATAAGCGG+CGG 0.702357 6_1:+22216492 None:intergenic
GAGAGTTAGCAATAGTACCA+AGG 0.705268 6_1:+22216601 None:intergenic
TCTTACACCTCCAAGTCACG+AGG 0.721324 6_1:-22214905 Msa0879610:CDS
TGATTCTATCTAACTCACTG+CGG 0.749210 6_1:+22212892 None:intergenic
GGAGGTGTAAGAACTGAACG+TGG 0.758096 6_1:+22214916 None:intergenic
GATGAACTACCTGATCCACG+TGG 0.801529 6_1:-22216573 Msa0879610:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CAAAAAATAAAATATTCATT+TGG + chr6_1:22216972-22216991 None:intergenic 10.0%
!!! TTTTAAAATCTAAAGTAGTT+TGG - chr6_1:22214583-22214602 Msa0879610:intron 15.0%
!!! TTGATTTAATTTAAGAAGTT+AGG - chr6_1:22215094-22215113 Msa0879610:intron 15.0%
!!! TTGTTATAATGTGTTTTAAA+AGG - chr6_1:22215480-22215499 Msa0879610:CDS 15.0%
!!! TTTATTACTTTTTTAAACGT+GGG + chr6_1:22217321-22217340 None:intergenic 15.0%
!!! TTTTATTACTTTTTTAAACG+TGG + chr6_1:22217322-22217341 None:intergenic 15.0%
!!! AACTGTTTTTGTTACTATTT+TGG - chr6_1:22214499-22214518 Msa0879610:intron 20.0%
!!! ACTGTTTTTGTTACTATTTT+GGG - chr6_1:22214500-22214519 Msa0879610:intron 20.0%
!!! AATTTCTTATTTAAGTGTTG+TGG - chr6_1:22214897-22214916 Msa0879610:CDS 20.0%
!! CAAATAAACAAAAACAAACA+AGG + chr6_1:22214945-22214964 None:intergenic 20.0%
!!! CTTGTTTGTTTTTGTTTATT+TGG - chr6_1:22214943-22214962 Msa0879610:CDS 20.0%
!!! ATTTAATTTAAGAAGTTAGG+TGG - chr6_1:22215097-22215116 Msa0879610:intron 20.0%
!! GTTAATTAATCATAATCGTT+TGG - chr6_1:22215355-22215374 Msa0879610:CDS 20.0%
!! CTTAATCAATATCTAAACAA+GGG + chr6_1:22215516-22215535 None:intergenic 20.0%
!! ACTTAATCAATATCTAAACA+AGG + chr6_1:22215517-22215536 None:intergenic 20.0%
!! GTAAATAAGTTAAACCAATT+TGG - chr6_1:22215535-22215554 Msa0879610:CDS 20.0%
!! ACTTGAAAGCTTATTAAAAA+TGG - chr6_1:22215597-22215616 Msa0879610:CDS 20.0%
!!! TTGATTCAATTTTACAATCT+CGG + chr6_1:22216315-22216334 None:intergenic 20.0%
!!! AAGTTGGTAATATAAATGAA+AGG - chr6_1:22216567-22216586 Msa0879610:CDS 20.0%
!! AAAAATCCTTGTAAAAGATT+TGG - chr6_1:22217001-22217020 Msa0879610:CDS 20.0%
!! AAAATCCTTGTAAAAGATTT+GGG - chr6_1:22217002-22217021 Msa0879610:CDS 20.0%
! AACATGAGATGGTAAAATTT+GGG + chr6_1:22212291-22212310 None:intergenic 25.0%
! TAACATGAGATGGTAAAATT+TGG + chr6_1:22212292-22212311 None:intergenic 25.0%
! TTGAAAAACATAACATGAGA+TGG + chr6_1:22212302-22212321 None:intergenic 25.0%
! AAGAGAAATGAGAAAAAGAA+AGG + chr6_1:22212355-22212374 None:intergenic 25.0%
!!! AGAAGATGATTTGGTTTTTT+GGG + chr6_1:22212785-22212804 None:intergenic 25.0%
!!! AAGAAGATGATTTGGTTTTT+TGG + chr6_1:22212786-22212805 None:intergenic 25.0%
! ACAACATAGCAATAAGATAA+TGG + chr6_1:22214447-22214466 None:intergenic 25.0%
! GAATGTTAGTTATAAGTAGT+TGG - chr6_1:22214522-22214541 Msa0879610:intron 25.0%
!! AAATCTAAAGTAGTTTGGTT+TGG - chr6_1:22214588-22214607 Msa0879610:intron 25.0%
! GATGATAGAAACATTATTTG+TGG - chr6_1:22214644-22214663 Msa0879610:intron 25.0%
!!! GCAATATTTTGAGACTTTTT+CGG + chr6_1:22214753-22214772 None:intergenic 25.0%
!! TTTGTTTATTTGGAATCCTT+TGG - chr6_1:22214953-22214972 Msa0879610:CDS 25.0%
!!! TTGCACATGATTTTAGTTAA+TGG - chr6_1:22214994-22215013 Msa0879610:intron 25.0%
! TTTAGTTAATGGTATGCAAA+TGG - chr6_1:22215005-22215024 Msa0879610:intron 25.0%
! CATAAACGTGAATCATTATA+AGG - chr6_1:22215289-22215308 Msa0879610:CDS 25.0%
! GTAAAAAAACTTTACACTGA+CGG + chr6_1:22215332-22215351 None:intergenic 25.0%
! AAAAAATCACAAACAGTCAT+AGG + chr6_1:22215427-22215446 None:intergenic 25.0%
!! ATGTACCTTTTGCATTTAAA+AGG - chr6_1:22215716-22215735 Msa0879610:CDS 25.0%
!! TGTACCTTTTGCATTTAAAA+GGG - chr6_1:22215717-22215736 Msa0879610:CDS 25.0%
! TGTAAAATTGAATCAAACTG+CGG - chr6_1:22216319-22216338 Msa0879610:CDS 25.0%
! AATCAATGAACAAGTTTATG+AGG - chr6_1:22216372-22216391 Msa0879610:CDS 25.0%
! TTGATGCTTCAACAAAATTA+AGG - chr6_1:22216782-22216801 Msa0879610:CDS 25.0%
!! TATAACCCAAATCTTTTACA+AGG + chr6_1:22217010-22217029 None:intergenic 25.0%
! TGATACATAACCTTCATAAA+AGG + chr6_1:22217089-22217108 None:intergenic 25.0%
! GTAATAAAATGTGTACTACT+TGG - chr6_1:22217333-22217352 Msa0879610:five_prime_UTR 25.0%
AGATGGTAAAATTTGGGTAA+TGG + chr6_1:22212285-22212304 None:intergenic 30.0%
!! TTTGTGTTGTTCTCTCTTTT+TGG + chr6_1:22212422-22212441 None:intergenic 30.0%
!!! AGATTGTTGTTTTGTGGAAA+AGG + chr6_1:22212550-22212569 None:intergenic 30.0%
!! GAAAATGGGTATTTTGGATT+TGG + chr6_1:22212625-22212644 None:intergenic 30.0%
! GTAGTAGAAAATGGGTATTT+TGG + chr6_1:22212631-22212650 None:intergenic 30.0%
TTAGAGATGAAATGTTAGCT+GGG + chr6_1:22212750-22212769 None:intergenic 30.0%
!!! ATTTGGTTTTTTGGGTTTGT+GGG + chr6_1:22212777-22212796 None:intergenic 30.0%
TAAATCGAGAAACGTTTCTT+CGG - chr6_1:22212984-22213003 Msa0879610:CDS 30.0%
ACTCAATCTTGTAATGAAGA+TGG - chr6_1:22213657-22213676 Msa0879610:CDS 30.0%
ATGAATCTTCATAGCAATCA+TGG - chr6_1:22213777-22213796 Msa0879610:intron 30.0%
TGAATCTTCATAGCAATCAT+GGG - chr6_1:22213778-22213797 Msa0879610:intron 30.0%
! TCTGAAACATCAGAAATTGT+TGG + chr6_1:22213816-22213835 None:intergenic 30.0%
CAATTTCTGATGTTTCAGAT+CGG - chr6_1:22213817-22213836 Msa0879610:intron 30.0%
TGTTTCTCAGAGAAAACAAT+GGG - chr6_1:22214022-22214041 Msa0879610:CDS 30.0%
!! TTCAAATACATTGGTTTCTC+CGG - chr6_1:22214256-22214275 Msa0879610:intron 30.0%
! ATAGCAATAAGATAATGGCA+TGG + chr6_1:22214442-22214461 None:intergenic 30.0%
! TGGTTTGGATTGAATTGAAT+TGG - chr6_1:22214603-22214622 Msa0879610:intron 30.0%
GGTTTGGATTGAATTGAATT+GGG - chr6_1:22214604-22214623 Msa0879610:intron 30.0%
TTACTTGCAACAAAACATGA+GGG + chr6_1:22214852-22214871 None:intergenic 30.0%
ATTACTTGCAACAAAACATG+AGG + chr6_1:22214853-22214872 None:intergenic 30.0%
TGGTAACAAATCTAATCCAA+AGG + chr6_1:22214972-22214991 None:intergenic 30.0%
AACTAAAATCATGTGCAAGT+TGG + chr6_1:22214992-22215011 None:intergenic 30.0%
AATGGTAGTTGCACATTTAA+AGG - chr6_1:22215023-22215042 Msa0879610:intron 30.0%
GAGTTATACCAACACTAATT+TGG - chr6_1:22215056-22215075 Msa0879610:intron 30.0%
!!! AACCAATTTGGCTTTTTAAC+AGG - chr6_1:22215547-22215566 Msa0879610:CDS 30.0%
! TTCTGCTGAGAAATTTTTGA+AGG - chr6_1:22215684-22215703 Msa0879610:CDS 30.0%
TAGTGATGTCCCATAATTTA+CGG - chr6_1:22215846-22215865 Msa0879610:CDS 30.0%
ATGGAAGAACCGTAAATTAT+GGG + chr6_1:22215858-22215877 None:intergenic 30.0%
AATGGAAGAACCGTAAATTA+TGG + chr6_1:22215859-22215878 None:intergenic 30.0%
CAAATGTTTCGATCAGAAAA+TGG + chr6_1:22215877-22215896 None:intergenic 30.0%
CAAGAAATCATTAGAACAGA+AGG - chr6_1:22216092-22216111 Msa0879610:CDS 30.0%
GAAGTCTCTAAACTTTCAAA+AGG - chr6_1:22216275-22216294 Msa0879610:CDS 30.0%
GTAAAATTGAATCAAACTGC+GGG - chr6_1:22216320-22216339 Msa0879610:CDS 30.0%
AATGAACAAGTTTATGAGGA+TGG - chr6_1:22216376-22216395 Msa0879610:CDS 30.0%
! TCATCCATTTAGAATCTTCA+TGG - chr6_1:22216502-22216521 Msa0879610:CDS 30.0%
ACTACCATGAAGATTCTAAA+TGG + chr6_1:22216509-22216528 None:intergenic 30.0%
ACTTCTTAACAGTTCTTGAT+AGG - chr6_1:22216534-22216553 Msa0879610:CDS 30.0%
CTTCTTAACAGTTCTTGATA+GGG - chr6_1:22216535-22216554 Msa0879610:CDS 30.0%
AGTGAGTTAGATAGAATCAA+TGG - chr6_1:22216730-22216749 Msa0879610:CDS 30.0%
GTGAGTTAGATAGAATCAAT+GGG - chr6_1:22216731-22216750 Msa0879610:CDS 30.0%
TAGAAAAACAACCTTTAACC+AGG - chr6_1:22216906-22216925 Msa0879610:CDS 30.0%
!! TTTAACCAGGTGATTTTGAT+GGG - chr6_1:22216919-22216938 Msa0879610:CDS 30.0%
TGTGTACAAAGCAATTCAAA+TGG - chr6_1:22217116-22217135 Msa0879610:CDS 30.0%
AAGCAATTCAAATGGCAAAT+TGG - chr6_1:22217124-22217143 Msa0879610:CDS 30.0%
! TGGTAAAATTTGGGTAATGG+TGG + chr6_1:22212282-22212301 None:intergenic 35.0%
GAGAAAAAGAAAGGAGAAGT+GGG + chr6_1:22212346-22212365 None:intergenic 35.0%
TGAGAAAAAGAAAGGAGAAG+TGG + chr6_1:22212347-22212366 None:intergenic 35.0%
!! TTTGTGGAAAAGGTTGATGA+AGG + chr6_1:22212540-22212559 None:intergenic 35.0%
!!! TATTTTGGATTTGGTGATGG+AGG + chr6_1:22212616-22212635 None:intergenic 35.0%
!! AAGAAGAAGATGAAGTGTTG+GGG + chr6_1:22212657-22212676 None:intergenic 35.0%
! GAAGAAGAAGATGAAGTGTT+GGG + chr6_1:22212658-22212677 None:intergenic 35.0%
AGAAGAAGAAGATGAAGTGT+TGG + chr6_1:22212659-22212678 None:intergenic 35.0%
GTTAGAGATGAAATGTTAGC+TGG + chr6_1:22212751-22212770 None:intergenic 35.0%
!!! GATTTGGTTTTTTGGGTTTG+TGG + chr6_1:22212778-22212797 None:intergenic 35.0%
GAGTTTGGAAGAAGATGATT+TGG + chr6_1:22212794-22212813 None:intergenic 35.0%
TGGTCGGAATTCAAGAAAAA+TGG - chr6_1:22213080-22213099 Msa0879610:CDS 35.0%
!!! GAAGAGTTTTATTCTCCAAG+AGG - chr6_1:22213204-22213223 Msa0879610:CDS 35.0%
CAAATTCTCAGCTGAAATTC+CGG + chr6_1:22213271-22213290 None:intergenic 35.0%
AATTTCAGCTGAGAATTTGG+TGG - chr6_1:22213272-22213291 Msa0879610:CDS 35.0%
ATTTCAGCTGAGAATTTGGT+GGG - chr6_1:22213273-22213292 Msa0879610:CDS 35.0%
TTCTTCAATGTCTTCATCTC+CGG - chr6_1:22213536-22213555 Msa0879610:CDS 35.0%
AGATTCAACGGTGATAAAGA+CGG + chr6_1:22213591-22213610 None:intergenic 35.0%
TCACCGACGAAAAATTTAGA+TGG - chr6_1:22213612-22213631 Msa0879610:CDS 35.0%
CACCGACGAAAAATTTAGAT+GGG - chr6_1:22213613-22213632 Msa0879610:CDS 35.0%
! GACCCATCTAAATTTTTCGT+CGG + chr6_1:22213618-22213637 None:intergenic 35.0%
!! CTAGAAGCATTCGATAATCT+CGG + chr6_1:22213693-22213712 None:intergenic 35.0%
AGATTATCGAATGCTTCTAG+TGG - chr6_1:22213693-22213712 Msa0879610:CDS 35.0%
! TTCATCATCGTCATCTTTTC+CGG + chr6_1:22213762-22213781 None:intergenic 35.0%
!!! CCAACTGTTTTGATTCAGAA+CGG - chr6_1:22213999-22214018 Msa0879610:CDS 35.0%
GTGTTTCTCAGAGAAAACAA+TGG - chr6_1:22214021-22214040 Msa0879610:CDS 35.0%
!! GTAATTGGTGTTGAAAGAAC+AGG + chr6_1:22214053-22214072 None:intergenic 35.0%
ACTCTATTAGCAGGTGTAAT+TGG + chr6_1:22214068-22214087 None:intergenic 35.0%
GCAAACTCCTTCAAATACAT+TGG - chr6_1:22214247-22214266 Msa0879610:intron 35.0%
GGAGAAACCAATGTATTTGA+AGG + chr6_1:22214257-22214276 None:intergenic 35.0%
TCTTCATTCTCCTCAAAACT+AGG + chr6_1:22214293-22214312 None:intergenic 35.0%
!!! TAGTTTTGAGGAGAATGAAG+AGG - chr6_1:22214292-22214311 Msa0879610:intron 35.0%
AAAGTTGAAGCCTTTGCATT+GGG - chr6_1:22214325-22214344 Msa0879610:intron 35.0%
TTTGCATTGGGATAAAGTGA+GGG - chr6_1:22214337-22214356 Msa0879610:intron 35.0%
! AAATGGTTTGGGATCATTTG+AGG - chr6_1:22214375-22214394 Msa0879610:intron 35.0%
AAACCCTTACTTAAAAGAGC+TGG + chr6_1:22214402-22214421 None:intergenic 35.0%
TACACCAAATCCAAAACCAA+AGG - chr6_1:22214671-22214690 Msa0879610:intron 35.0%
TACTTGCAACAAAACATGAG+GGG + chr6_1:22214851-22214870 None:intergenic 35.0%
ACAAGGATTTACACAAGTGA+TGG + chr6_1:22214928-22214947 None:intergenic 35.0%
GATGTTTGCCAAATTAGTGT+TGG + chr6_1:22215067-22215086 None:intergenic 35.0%
! ATGCTTTTAGTAGTAACCAG+AGG + chr6_1:22215198-22215217 None:intergenic 35.0%
! CATAGGTATGACTTTAGAAG+TGG + chr6_1:22215410-22215429 None:intergenic 35.0%
CACCTGTTAAAAAGCCAAAT+TGG + chr6_1:22215552-22215571 None:intergenic 35.0%
! ACCTTTTGCATTTAAAAGGG+TGG - chr6_1:22215720-22215739 Msa0879610:CDS 35.0%
! TCCACCCTTTTAAATGCAAA+AGG + chr6_1:22215724-22215743 None:intergenic 35.0%
! AGCCAATTTTGAATCTGAAG+TGG - chr6_1:22215759-22215778 Msa0879610:CDS 35.0%
CTCCACTTCAGATTCAAAAT+TGG + chr6_1:22215764-22215783 None:intergenic 35.0%
TAAATCCTTTCAGACTCTAG+AGG - chr6_1:22215792-22215811 Msa0879610:CDS 35.0%
AAATTATGGGACATCACTAC+TGG + chr6_1:22215845-22215864 None:intergenic 35.0%
CTGATCGAAACATTTGTTTC+AGG - chr6_1:22215881-22215900 Msa0879610:CDS 35.0%
AATGTTCTTGAAGCTTCTAG+AGG - chr6_1:22215932-22215951 Msa0879610:CDS 35.0%
! GATTTGTTCCAACATTCATG+CGG + chr6_1:22215977-22215996 None:intergenic 35.0%
ATGAATGTTGGAACAAATCG+AGG - chr6_1:22215978-22215997 Msa0879610:CDS 35.0%
TGATTCTGCGAATTTACGAA+CGG + chr6_1:22216357-22216376 None:intergenic 35.0%
!! GAGATCACAGAGTATTTTCA+TGG - chr6_1:22216458-22216477 Msa0879610:CDS 35.0%
GATAGGGTATGTAAAGAAGT+TGG - chr6_1:22216551-22216570 Msa0879610:CDS 35.0%
TCTATGAGCAGAACTAATCA+TGG + chr6_1:22216594-22216613 None:intergenic 35.0%
AAAGAGACATTACAGTTCCT+CGG - chr6_1:22216667-22216686 Msa0879610:CDS 35.0%
TGATTCTATCTAACTCACTG+CGG + chr6_1:22216729-22216748 None:intergenic 35.0%
!! TCAATGGGTTACTGTGATTT+AGG - chr6_1:22216746-22216765 Msa0879610:CDS 35.0%
! ACAAAATTAAGGTGCTATCG+TGG - chr6_1:22216793-22216812 Msa0879610:CDS 35.0%
CATCAAAATCACCTGGTTAA+AGG + chr6_1:22216920-22216939 None:intergenic 35.0%
! CTTTAACCAGGTGATTTTGA+TGG - chr6_1:22216918-22216937 Msa0879610:CDS 35.0%
!! TTAACCAGGTGATTTTGATG+GGG - chr6_1:22216920-22216939 Msa0879610:CDS 35.0%
! TAAGCTTGTGCCTTTTATGA+AGG - chr6_1:22217076-22217095 Msa0879610:CDS 35.0%
!! CTATTAAGAGCATCTCCAAT+GGG - chr6_1:22217171-22217190 Msa0879610:exon 35.0%
!! TATTAAGAGCATCTCCAATG+GGG - chr6_1:22217172-22217191 Msa0879610:exon 35.0%
! ATTTTTCTTCCTCCAATGGA+GGG + chr6_1:22217234-22217253 None:intergenic 35.0%
! AATTTTTCTTCCTCCAATGG+AGG + chr6_1:22217235-22217254 None:intergenic 35.0%
! CTCAATTTTTCTTCCTCCAA+TGG + chr6_1:22217238-22217257 None:intergenic 35.0%
! GGAAAGAAGAGAGTGTGAAA+AGG + chr6_1:22212325-22212344 None:intergenic 40.0%
CTCGGTTCATTTGATGAGAT+TGG + chr6_1:22212511-22212530 None:intergenic 40.0%
!! GGTTGATGAAGGAATCTTCT+CGG + chr6_1:22212529-22212548 None:intergenic 40.0%
!!! GGTGAGAGATTGTTGTTTTG+TGG + chr6_1:22212556-22212575 None:intergenic 40.0%
!!! GGGTATTTTGGATTTGGTGA+TGG + chr6_1:22212619-22212638 None:intergenic 40.0%
!! AGAAGAAGATGAAGTGTTGG+GGG + chr6_1:22212656-22212675 None:intergenic 40.0%
GAAGAGACGAATACTACTGT+CGG + chr6_1:22212935-22212954 None:intergenic 40.0%
AACGTTTCTCGATTTAGCGA+CGG + chr6_1:22212980-22212999 None:intergenic 40.0%
TCTTCGGAGTTTCTTTACCT+TGG - chr6_1:22213000-22213019 Msa0879610:CDS 40.0%
GAGAGTTAGCAATAGTACCA+AGG + chr6_1:22213020-22213039 None:intergenic 40.0%
! TTCAAGAAAAATGGACTCGC+CGG - chr6_1:22213089-22213108 Msa0879610:CDS 40.0%
TCGATGTACGATGAAGGTAA+TGG - chr6_1:22213147-22213166 Msa0879610:CDS 40.0%
! ATGTACGATGAAGGTAATGG+TGG - chr6_1:22213150-22213169 Msa0879610:CDS 40.0%
TCTCCAAGAGGTTCTTTGAA+CGG - chr6_1:22213216-22213235 Msa0879610:CDS 40.0%
TTTCCGTTCAAAGAACCTCT+TGG + chr6_1:22213222-22213241 None:intergenic 40.0%
AGAGGTTCTTTGAACGGAAA+TGG - chr6_1:22213222-22213241 Msa0879610:CDS 40.0%
GAGGTTCTTTGAACGGAAAT+GGG - chr6_1:22213223-22213242 Msa0879610:CDS 40.0%
TTCTTTGAACGGAAATGGGT+CGG - chr6_1:22213227-22213246 Msa0879610:CDS 40.0%
CGGAATTTCAGCTGAGAATT+TGG - chr6_1:22213269-22213288 Msa0879610:CDS 40.0%
TTCATCTTCTTCTGCTTCAC+CGG - chr6_1:22213335-22213354 Msa0879610:CDS 40.0%
GACTTTGGTTGTGATCTTCT+TGG + chr6_1:22213405-22213424 None:intergenic 40.0%
TTAACAAGTAGTGGCTGTGT+CGG + chr6_1:22213453-22213472 None:intergenic 40.0%
CCAACGTCATTAACAAGTAG+TGG + chr6_1:22213462-22213481 None:intergenic 40.0%
! CCACTACTTGTTAATGACGT+TGG - chr6_1:22213459-22213478 Msa0879610:CDS 40.0%
TTCGTCGGTGAAAGATTCAA+CGG + chr6_1:22213603-22213622 None:intergenic 40.0%
ATCATCGTCTTCTTCATCGT+CGG - chr6_1:22213719-22213738 Msa0879610:intron 40.0%
TCTTCATAGCAATCATGGGT+TGG - chr6_1:22213782-22213801 Msa0879610:intron 40.0%
GAAAGTGGCAATGATGAAAG+AGG + chr6_1:22213855-22213874 None:intergenic 40.0%
GTGCTCATTATATCTCTCTC+CGG + chr6_1:22213897-22213916 None:intergenic 40.0%
!! GCAATTGGTGTTAACAAGTC+AGG + chr6_1:22213972-22213991 None:intergenic 40.0%
!! ACAGTTGGTGATTCAGCAAT+TGG + chr6_1:22213987-22214006 None:intergenic 40.0%
! CCGTTCTGAATCAAAACAGT+TGG + chr6_1:22214002-22214021 None:intergenic 40.0%
CTTGAAGGAGGTTTCAATTC+CGG + chr6_1:22214215-22214234 None:intergenic 40.0%
GAAGGAGTTTGCAACACAAA+AGG + chr6_1:22214239-22214258 None:intergenic 40.0%
AAACTAGGTGGTAACTCAAC+CGG + chr6_1:22214278-22214297 None:intergenic 40.0%
!!! TGAGTTACCACCTAGTTTTG+AGG - chr6_1:22214280-22214299 Msa0879610:intron 40.0%
TCATTCTCCTCAAAACTAGG+TGG + chr6_1:22214290-22214309 None:intergenic 40.0%
CAATGCAAAGGCTTCAACTT+TGG + chr6_1:22214326-22214345 None:intergenic 40.0%
CAAAGTTGAAGCCTTTGCAT+TGG - chr6_1:22214324-22214343 Msa0879610:intron 40.0%
CTCACTTTATCCCAATGCAA+AGG + chr6_1:22214338-22214357 None:intergenic 40.0%
CTTTGCATTGGGATAAAGTG+AGG - chr6_1:22214336-22214355 Msa0879610:intron 40.0%
TTCCGATCGTGAAATGGTTT+GGG - chr6_1:22214364-22214383 Msa0879610:intron 40.0%
ATCCCAAACCATTTCACGAT+CGG + chr6_1:22214369-22214388 None:intergenic 40.0%
!! AGGTCCAGCTCTTTTAAGTA+AGG - chr6_1:22214395-22214414 Msa0879610:intron 40.0%
!! GGTCCAGCTCTTTTAAGTAA+GGG - chr6_1:22214396-22214415 Msa0879610:intron 40.0%
GATTGAATTGAATTGGGTGC+AGG - chr6_1:22214610-22214629 Msa0879610:intron 40.0%
!!! GCATCCTTTGGTTTTGGATT+TGG + chr6_1:22214678-22214697 None:intergenic 40.0%
TATTGCTATCTTGCTTCGAG+CGG - chr6_1:22214767-22214786 Msa0879610:intron 40.0%
!! GCTGTTTTATAGCTATCCTC+TGG - chr6_1:22215179-22215198 Msa0879610:intron 40.0%
!! ACAGGTGTTACTGATACACT+TGG - chr6_1:22215565-22215584 Msa0879610:CDS 40.0%
ATTAAAAATGGCGCCAAGCA+AGG - chr6_1:22215609-22215628 Msa0879610:CDS 40.0%
!! CTTTACCTCTAGAGTCTGAA+AGG + chr6_1:22215800-22215819 None:intergenic 40.0%
CTTCTTCACATTCGCTAGAT+CGG + chr6_1:22216222-22216241 None:intergenic 40.0%
TTTCCATGTAATCCAGGAAG+TGG + chr6_1:22216650-22216669 None:intergenic 40.0%
TGTCTCTTTCCATGTAATCC+AGG + chr6_1:22216656-22216675 None:intergenic 40.0%
AGATGAACTATCATCATCCG+AGG + chr6_1:22216687-22216706 None:intergenic 40.0%
GCGATTCCAAATATGCAGTT+AGG - chr6_1:22216832-22216851 Msa0879610:CDS 40.0%
CAGACACCTAACTGCATATT+TGG + chr6_1:22216841-22216860 None:intergenic 40.0%
! TTAGTGTCACTGTGACATCT+TGG - chr6_1:22216870-22216889 Msa0879610:CDS 40.0%
GGCAAATTGGAGACAACATT+TGG - chr6_1:22217137-22217156 Msa0879610:CDS 40.0%
!! GCTATTAAGAGCATCTCCAA+TGG - chr6_1:22217170-22217189 Msa0879610:exon 40.0%
!! ATTAAGAGCATCTCCAATGG+GGG - chr6_1:22217173-22217192 Msa0879610:exon 40.0%
GAAAAATTGAGTCCCCGTTA+AGG - chr6_1:22217247-22217266 Msa0879610:five_prime_UTR 40.0%
TATAGTTGCCCGTTCCTTAA+CGG + chr6_1:22217264-22217283 None:intergenic 40.0%
AAGGAACGGGCAACTATATA+AGG - chr6_1:22217266-22217285 Msa0879610:five_prime_UTR 40.0%
TTAGTTACTCAGGAGAGAGA+GGG + chr6_1:22217293-22217312 None:intergenic 40.0%
TCTCTCTCCTGAGTAACTAA+CGG - chr6_1:22217293-22217312 Msa0879610:five_prime_UTR 40.0%
GAGAGAGTAGAGAGTGATGA+AGG + chr6_1:22212378-22212397 None:intergenic 45.0%
!! TTTGGATTTGGTGATGGAGG+TGG + chr6_1:22212613-22212632 None:intergenic 45.0%
! TGGGGGGTGTAGTAGAAAAT+GGG + chr6_1:22212639-22212658 None:intergenic 45.0%
! TTGGGGGGTGTAGTAGAAAA+TGG + chr6_1:22212640-22212659 None:intergenic 45.0%
!! GAAGAAGATGAAGTGTTGGG+GGG + chr6_1:22212655-22212674 None:intergenic 45.0%
GGGTATGTAGGGAAAAAAGG+AGG + chr6_1:22212685-22212704 None:intergenic 45.0%
! GAGGGGTATGTAGGGAAAAA+AGG + chr6_1:22212688-22212707 None:intergenic 45.0%
GAAGCAAAGGAAGAAGGTGA+AGG + chr6_1:22212724-22212743 None:intergenic 45.0%
GGGAATGAAGCAAAGGAAGA+AGG + chr6_1:22212730-22212749 None:intergenic 45.0%
GTTAGCTGGGAATGAAGCAA+AGG + chr6_1:22212737-22212756 None:intergenic 45.0%
TTCTCGATTTAGCGACGGTA+GGG + chr6_1:22212975-22212994 None:intergenic 45.0%
TTTCTCGATTTAGCGACGGT+AGG + chr6_1:22212976-22212995 None:intergenic 45.0%
GGTACTATTGCTAACTCTCG+TGG - chr6_1:22213021-22213040 Msa0879610:CDS 45.0%
! ATCGAGCTTTGTCGCATAAG+CGG + chr6_1:22213132-22213151 None:intergenic 45.0%
CAAAGCTCGATGTACGATGA+AGG - chr6_1:22213141-22213160 Msa0879610:CDS 45.0%
TCTTTGAACGGAAATGGGTC+GGG - chr6_1:22213228-22213247 Msa0879610:CDS 45.0%
TCATCTTCTTCTGCTTCACC+GGG - chr6_1:22213336-22213355 Msa0879610:CDS 45.0%
CTTCTTGGACTCAAACTCAC+CGG + chr6_1:22213390-22213409 None:intergenic 45.0%
AAGATCACAACCAAAGTCGC+CGG - chr6_1:22213407-22213426 Msa0879610:CDS 45.0%
! ACAACATTTTCCGGCGACTT+TGG + chr6_1:22213420-22213439 None:intergenic 45.0%
GCCGGAAAATGTTGTAACTC+CGG - chr6_1:22213425-22213444 Msa0879610:CDS 45.0%
! GCCGGAGTTACAACATTTTC+CGG + chr6_1:22213429-22213448 None:intergenic 45.0%
AAGAACAAGACTGCACGTGA+CGG + chr6_1:22213521-22213540 None:intergenic 45.0%
AGACGGTGACTTACATTCTC+CGG + chr6_1:22213574-22213593 None:intergenic 45.0%
!! GAAAGAAGCGTTGGTGAAAG+TGG + chr6_1:22213870-22213889 None:intergenic 45.0%
! AACCAGCTTCTAGGAAGCAT+TGG - chr6_1:22213940-22213959 Msa0879610:CDS 45.0%
!! ACCAGCTTCTAGGAAGCATT+GGG - chr6_1:22213941-22213960 Msa0879610:CDS 45.0%
GGAGCTGAAACTCTATTAGC+AGG + chr6_1:22214077-22214096 None:intergenic 45.0%
AACAACTCCTGTTGGTCAAC+CGG - chr6_1:22214175-22214194 Msa0879610:intron 45.0%
CGGAATTGAAACCTCCTTCA+AGG - chr6_1:22214213-22214232 Msa0879610:intron 45.0%
AACACAAAAGGCCTTGAAGG+AGG + chr6_1:22214227-22214246 None:intergenic 45.0%
TGCAACACAAAAGGCCTTGA+AGG + chr6_1:22214230-22214249 None:intergenic 45.0%
GTTCCGATCGTGAAATGGTT+TGG - chr6_1:22214363-22214382 Msa0879610:intron 45.0%
! AATTGGGTGCAGGTTGAATG+AGG - chr6_1:22214620-22214639 Msa0879610:intron 45.0%
!! GGAGTAGCATCCTTTGGTTT+TGG + chr6_1:22214684-22214703 None:intergenic 45.0%
AATACCCTATCCTCGTGACT+TGG + chr6_1:22214726-22214745 None:intergenic 45.0%
AAGTCACGAGGATAGGGTAT+TGG - chr6_1:22214725-22214744 Msa0879610:intron 45.0%
GCTTCGAGCGGTTAATGTTA+CGG - chr6_1:22214779-22214798 Msa0879610:intron 45.0%
AGCGGTTAATGTTACGGTAG+AGG - chr6_1:22214785-22214804 Msa0879610:intron 45.0%
! GGAAGAAGAGCGCAAATTGA+AGG - chr6_1:22215630-22215649 Msa0879610:CDS 45.0%
GACGACTCTCCAAACAAACT+CGG - chr6_1:22215661-22215680 Msa0879610:CDS 45.0%
! TCAGCAGAACCGAGTTTGTT+TGG + chr6_1:22215673-22215692 None:intergenic 45.0%
CTCAAGCTGGTTGACGTTAA+AGG - chr6_1:22216032-22216051 Msa0879610:CDS 45.0%
! GTTGACGTTAAAGGTGCAGA+TGG - chr6_1:22216041-22216060 Msa0879610:CDS 45.0%
AAGACCAAGTCTTCTGCACT+TGG + chr6_1:22216177-22216196 None:intergenic 45.0%
CGATCTAGCGAATGTGAAGA+AGG - chr6_1:22216220-22216239 Msa0879610:CDS 45.0%
CAAGTTTATGAGGATGGCTG+AGG - chr6_1:22216382-22216401 Msa0879610:CDS 45.0%
! GAAGTGGTTGTGGAAGCATA+GGG + chr6_1:22216634-22216653 None:intergenic 45.0%
TGTAATCCAGGAAGTGGTTG+TGG + chr6_1:22216644-22216663 None:intergenic 45.0%
CAACCACTTCCTGGATTACA+TGG - chr6_1:22216644-22216663 Msa0879610:CDS 45.0%
TCATCTCCTTAGCGCATGTT+TGG - chr6_1:22216701-22216720 Msa0879610:CDS 45.0%
ATGACCCCATCAAAATCACC+TGG + chr6_1:22216927-22216946 None:intergenic 45.0%
!! AGGTGATTTTGATGGGGTCA+TGG - chr6_1:22216926-22216945 Msa0879610:CDS 45.0%
!! TGATTTTGATGGGGTCATGG+AGG - chr6_1:22216929-22216948 Msa0879610:CDS 45.0%
!! GATTTTGATGGGGTCATGGA+GGG - chr6_1:22216930-22216949 Msa0879610:CDS 45.0%
!! TTAAGAGCATCTCCAATGGG+GGG - chr6_1:22217174-22217193 Msa0879610:exon 45.0%
GGAGTGGTCCTTGTTAAGTA+AGG + chr6_1:22217201-22217220 None:intergenic 45.0%
ATTGAGTCCCCGTTAAGGAA+CGG - chr6_1:22217252-22217271 Msa0879610:five_prime_UTR 45.0%
ATAGTTGCCCGTTCCTTAAC+GGG + chr6_1:22217263-22217282 None:intergenic 45.0%
GTTAGTTACTCAGGAGAGAG+AGG + chr6_1:22217294-22217313 None:intergenic 45.0%
CTCTCTCCTGAGTAACTAAC+GGG - chr6_1:22217294-22217313 Msa0879610:five_prime_UTR 45.0%
!! AAAAAATAAAATATTCATTT+GGG + chr6_1:22216971-22216990 None:intergenic 5.0%
GATGGTGAAGGAGGTTGTGA+AGG + chr6_1:22212577-22212596 None:intergenic 50.0%
! GATGAAGGAGGTGATGGTGA+AGG + chr6_1:22212589-22212608 None:intergenic 50.0%
! AAGAAGGTGAAGGTGGTGGT+GGG + chr6_1:22212714-22212733 None:intergenic 50.0%
AAGGAAGAAGGTGAAGGTGG+TGG + chr6_1:22212718-22212737 None:intergenic 50.0%
GCAAAGGAAGAAGGTGAAGG+TGG + chr6_1:22212721-22212740 None:intergenic 50.0%
GATGAACTACCTGATCCACG+TGG - chr6_1:22213045-22213064 Msa0879610:CDS 50.0%
CTGATCGAATGAGAACGACC+CGG + chr6_1:22213357-22213376 None:intergenic 50.0%
TTCGATCAGTCTCTCTCCAC+CGG - chr6_1:22213368-22213387 Msa0879610:CDS 50.0%
TCTCCGGAGAAAATCTTCGC+CGG - chr6_1:22213552-22213571 Msa0879610:CDS 50.0%
! TCTCCGGCGAAGATTTTCTC+CGG + chr6_1:22213558-22213577 None:intergenic 50.0%
GGCGTTTACTTTACCATCGC+CGG - chr6_1:22213740-22213759 Msa0879610:intron 50.0%
! ATCGTCATCTTTTCCGGCGA+TGG + chr6_1:22213756-22213775 None:intergenic 50.0%
ACCAACGCTTCTTTCATCGC+CGG - chr6_1:22213875-22213894 Msa0879610:CDS 50.0%
TGCTTCCTAGAAGCTGGTTG+CGG + chr6_1:22213939-22213958 None:intergenic 50.0%
TCCCAATGCTTCCTAGAAGC+TGG + chr6_1:22213945-22213964 None:intergenic 50.0%
CATTGCTTCCGCTGCTTCAT+CGG + chr6_1:22214140-22214159 None:intergenic 50.0%
GATGAAGCAGCGGAAGCAAT+GGG - chr6_1:22214139-22214158 Msa0879610:intron 50.0%
CCAACAGGAGTTGTTGGAGA+AGG + chr6_1:22214170-22214189 None:intergenic 50.0%
CCTTCTCCAACAACTCCTGT+TGG - chr6_1:22214167-22214186 Msa0879610:intron 50.0%
GGTTGACCAACAGGAGTTGT+TGG + chr6_1:22214176-22214195 None:intergenic 50.0%
! TTGGTCAACCGGTGGTTTGT+AGG - chr6_1:22214186-22214205 Msa0879610:intron 50.0%
GAAGGAGGTTTCAATTCCGG+CGG + chr6_1:22214212-22214231 None:intergenic 50.0%
! GGCTAGTTCCGATCGTGAAA+TGG - chr6_1:22214358-22214377 Msa0879610:intron 50.0%
GAACGTGGAGTAGCATCCTT+TGG + chr6_1:22214690-22214709 None:intergenic 50.0%
! GGAGGTGTAAGAACTGAACG+TGG + chr6_1:22214705-22214724 None:intergenic 50.0%
TCTTACACCTCCAAGTCACG+AGG - chr6_1:22214713-22214732 Msa0879610:intron 50.0%
ACCTCCAAGTCACGAGGATA+GGG - chr6_1:22214719-22214738 Msa0879610:intron 50.0%
!! GGAAGTGTGTGAAGCACTGT+TGG - chr6_1:22214806-22214825 Msa0879610:intron 50.0%
!! GTGTGTGAAGCACTGTTGGA+AGG - chr6_1:22214810-22214829 Msa0879610:CDS 50.0%
TTGCGCTCTTCTTCCTTGCT+TGG + chr6_1:22215625-22215644 None:intergenic 50.0%
TAGAGGCCGTGCTCAAAACT+GGG - chr6_1:22215949-22215968 Msa0879610:CDS 50.0%
ACTGGGAACCGCATGAATGT+TGG - chr6_1:22215966-22215985 Msa0879610:CDS 50.0%
GCTCGATACACTTCTCAAGC+TGG - chr6_1:22216019-22216038 Msa0879610:CDS 50.0%
TCGTCACTCAATGTTGCGCT+CGG + chr6_1:22216152-22216171 None:intergenic 50.0%
GATGCCAAGTGCAGAAGACT+TGG - chr6_1:22216170-22216189 Msa0879610:CDS 50.0%
GTTTAGAGACTTCGCTCGTG+AGG + chr6_1:22216268-22216287 None:intergenic 50.0%
GTTTATGAGGATGGCTGAGG+AGG - chr6_1:22216385-22216404 Msa0879610:CDS 50.0%
AGCATAGGGTTCACTGGAAC+AGG + chr6_1:22216620-22216639 None:intergenic 50.0%
! TGTGGAAGCATAGGGTTCAC+TGG + chr6_1:22216626-22216645 None:intergenic 50.0%
! GGAAGTGGTTGTGGAAGCAT+AGG + chr6_1:22216635-22216654 None:intergenic 50.0%
ATGCTTCCACAACCACTTCC+TGG - chr6_1:22216635-22216654 Msa0879610:CDS 50.0%
GTTAAGTAAGGACCCCCCAT+TGG + chr6_1:22217189-22217208 None:intergenic 50.0%
TGGGGGGTCCTTACTTAACA+AGG - chr6_1:22217190-22217209 Msa0879610:five_prime_UTR 50.0%
TCCAATGGAGGGTCCTTAAC+GGG + chr6_1:22217223-22217242 None:intergenic 50.0%
CTCCAATGGAGGGTCCTTAA+CGG + chr6_1:22217224-22217243 None:intergenic 50.0%
TTGAGTCCCCGTTAAGGAAC+GGG - chr6_1:22217253-22217272 Msa0879610:five_prime_UTR 50.0%
TAGTTGCCCGTTCCTTAACG+GGG + chr6_1:22217262-22217281 None:intergenic 50.0%
! GAAGGAGGTGATGGTGAAGG+AGG + chr6_1:22212586-22212605 None:intergenic 55.0%
! GGTGGTGATGAAGGAGGTGA+TGG + chr6_1:22212595-22212614 None:intergenic 55.0%
! GATGGAGGTGGTGATGAAGG+AGG + chr6_1:22212601-22212620 None:intergenic 55.0%
!! GGTGATGGAGGTGGTGATGA+AGG + chr6_1:22212604-22212623 None:intergenic 55.0%
! GTGGGGTTGAGGGGTATGTA+GGG + chr6_1:22212696-22212715 None:intergenic 55.0%
! AGAAGGTGAAGGTGGTGGTG+GGG + chr6_1:22212713-22212732 None:intergenic 55.0%
! GAAGAAGGTGAAGGTGGTGG+TGG + chr6_1:22212715-22212734 None:intergenic 55.0%
TGAGATTGCGACGACAGCGA+CGG + chr6_1:22212848-22212867 None:intergenic 55.0%
ATTCGTCTCTTCCCTCGCGA+CGG - chr6_1:22212943-22212962 Msa0879610:CDS 55.0%
TGAATTCCGACCACCACCAC+CGG + chr6_1:22213073-22213092 None:intergenic 55.0%
TGTCGCATAAGCGGCGGTAA+CGG + chr6_1:22213123-22213142 None:intergenic 55.0%
! GAGCTTTGTCGCATAAGCGG+CGG + chr6_1:22213129-22213148 None:intergenic 55.0%
!! GGTGGTGCTACTGTTACTGC+TGG - chr6_1:22213168-22213187 Msa0879610:CDS 55.0%
ACGGAAATGGGTCGGGTTCT+CGG - chr6_1:22213235-22213254 Msa0879610:CDS 55.0%
! GGTTCTCGGAGAGTTTTCGC+CGG - chr6_1:22213249-22213268 Msa0879610:CDS 55.0%
CTTGGACTCAAACTCACCGG+TGG + chr6_1:22213387-22213406 None:intergenic 55.0%
! TCCGGCGATGAAAGAAGCGT+TGG + chr6_1:22213879-22213898 None:intergenic 55.0%
TTCCTAGAAGCTGGTTGCGG+AGG + chr6_1:22213936-22213955 None:intergenic 55.0%
TTCATCGGCATTGCCAGTGG+AGG + chr6_1:22214125-22214144 None:intergenic 55.0%
TGCTTCATCGGCATTGCCAG+TGG + chr6_1:22214128-22214147 None:intergenic 55.0%
TGGCAATGCCGATGAAGCAG+CGG - chr6_1:22214129-22214148 Msa0879610:intron 55.0%
CGATGAAGCAGCGGAAGCAA+TGG - chr6_1:22214138-22214157 Msa0879610:intron 55.0%
AACTCCTGTTGGTCAACCGG+TGG - chr6_1:22214178-22214197 Msa0879610:intron 55.0%
! CAAACCACCGGTTGACCAAC+AGG + chr6_1:22214185-22214204 None:intergenic 55.0%
CACCTCCAAGTCACGAGGAT+AGG - chr6_1:22214718-22214737 Msa0879610:intron 55.0%
! ACCCTATCCTCGTGACTTGG+AGG + chr6_1:22214723-22214742 None:intergenic 55.0%
CTAGAGGCCGTGCTCAAAAC+TGG - chr6_1:22215948-22215967 Msa0879610:CDS 55.0%
!!! GCGGTTCCCAGTTTTGAGCA+CGG + chr6_1:22215958-22215977 None:intergenic 55.0%
TGTGAAGAAGGCCGCGACAA+TGG - chr6_1:22216232-22216251 Msa0879610:CDS 55.0%
GACTTCGGAGTCCATTGTCG+CGG + chr6_1:22216246-22216265 None:intergenic 55.0%
GACTTCGCTCGTGAGGACTT+CGG + chr6_1:22216261-22216280 None:intergenic 55.0%
GCGGATCCAAACATGCGCTA+AGG + chr6_1:22216710-22216729 None:intergenic 55.0%
! ATGGAGGGTGCGTTATGGTC+TGG - chr6_1:22216945-22216964 Msa0879610:CDS 55.0%
ACAAGGACCACTCCCCGTTA+AGG - chr6_1:22217207-22217226 Msa0879610:five_prime_UTR 55.0%
CCAATGGAGGGTCCTTAACG+GGG + chr6_1:22217222-22217241 None:intergenic 55.0%
CGTTAAGGACCCTCCATTGG+AGG - chr6_1:22217222-22217241 Msa0879610:five_prime_UTR 55.0%
GTGGGACCCGTTAGTTACTC+AGG + chr6_1:22217303-22217322 None:intergenic 55.0%
! GGTGGGGTTGAGGGGTATGT+AGG + chr6_1:22212697-22212716 None:intergenic 60.0%
!! AAGGTGGTGGTGGGGTTGAG+GGG + chr6_1:22212705-22212724 None:intergenic 60.0%
!! GAAGGTGGTGGTGGGGTTGA+GGG + chr6_1:22212706-22212725 None:intergenic 60.0%
!! TGAAGGTGGTGGTGGGGTTG+AGG + chr6_1:22212707-22212726 None:intergenic 60.0%
AATGGCGACGGCGAGGAGTT+TGG + chr6_1:22212809-22212828 None:intergenic 60.0%
ACTCCTCGCCGTCGCCATTA+CGG - chr6_1:22212810-22212829 Msa0879610:three_prime_UTR 60.0%
! GATGACGGCCGTAATGGCGA+CGG + chr6_1:22212821-22212840 None:intergenic 60.0%
! AGTAGTGGCTGTGTCGGTGC+CGG + chr6_1:22213447-22213466 None:intergenic 60.0%
CTAGAAGCTGGTTGCGGAGG+CGG + chr6_1:22213933-22213952 None:intergenic 60.0%
ATTGCCAGTGGAGGTGGAGG+TGG + chr6_1:22214116-22214135 None:intergenic 60.0%
ATCGGCATTGCCAGTGGAGG+TGG + chr6_1:22214122-22214141 None:intergenic 60.0%
! GGGTCATGGAGGGTGCGTTA+TGG - chr6_1:22216940-22216959 Msa0879610:CDS 60.0%
CCCCGTTAAGGACCCTCCAT+TGG - chr6_1:22217219-22217238 Msa0879610:five_prime_UTR 60.0%
GATTGCGACGACAGCGACGG+CGG + chr6_1:22212845-22212864 None:intergenic 65.0%
CTACCTGATCCACGTGGCGC+CGG - chr6_1:22213051-22213070 Msa0879610:CDS 65.0%
! GGCGGTAACGGCTGTAGCTC+CGG + chr6_1:22213111-22213130 None:intergenic 65.0%
CGCCTCCGCAACCAGCTTCT+AGG - chr6_1:22213931-22213950 Msa0879610:CDS 65.0%
! AGTGGAGGTGGAGGTGGTGG+TGG + chr6_1:22214110-22214129 None:intergenic 65.0%
ACCACCACCTCCACCTCCAC+TGG - chr6_1:22214109-22214128 Msa0879610:intron 65.0%
GGCATTGCCAGTGGAGGTGG+AGG + chr6_1:22214119-22214138 None:intergenic 65.0%
! ACCGGTGGTTTGTAGGCCGC+CGG - chr6_1:22214193-22214212 Msa0879610:intron 65.0%
TCCGGCGGCCTACAAACCAC+CGG + chr6_1:22214197-22214216 None:intergenic 65.0%
GGAGGGTCCTTAACGGGGAG+TGG + chr6_1:22217217-22217236 None:intergenic 65.0%
! GGCGGCGATGACGGCCGTAA+TGG + chr6_1:22212827-22212846 None:intergenic 70.0%
GACAGCGACGGCGGCGATGA+CGG + chr6_1:22212836-22212855 None:intergenic 70.0%
CGTCTCTTCCCTCGCGACGG+TGG - chr6_1:22212946-22212965 Msa0879610:CDS 70.0%
TAGGGACGCCACCGTCGCGA+GGG + chr6_1:22212957-22212976 None:intergenic 70.0%
GAAGCTGGTTGCGGAGGCGG+TGG + chr6_1:22213930-22213949 None:intergenic 70.0%
!! GGAGGTGGAGGTGGTGGTGG+CGG + chr6_1:22214107-22214126 None:intergenic 70.0%
GCCAGTGGAGGTGGAGGTGG+TGG + chr6_1:22214113-22214132 None:intergenic 70.0%
CGGCCGTAATGGCGACGGCG+AGG + chr6_1:22212816-22212835 None:intergenic 75.0%
GTAGGGACGCCACCGTCGCG+AGG + chr6_1:22212958-22212977 None:intergenic 75.0%
CCACCGGCGCCACGTGGATC+AGG + chr6_1:22213057-22213076 None:intergenic 75.0%
! CCTGATCCACGTGGCGCCGG+TGG - chr6_1:22213054-22213073 Msa0879610:CDS 75.0%
!! GATCCACGTGGCGCCGGTGG+TGG - chr6_1:22213057-22213076 Msa0879610:CDS 75.0%
!! GTGGCGCCGGTGGTGGTGGT+CGG - chr6_1:22213064-22213083 Msa0879610:CDS 75.0%
! GGTTGCGGAGGCGGTGGTGG+TGG + chr6_1:22213924-22213943 None:intergenic 75.0%
GCTGGTTGCGGAGGCGGTGG+TGG + chr6_1:22213927-22213946 None:intergenic 75.0%
!! GGTGGAGGTGGTGGTGGCGG+CGG + chr6_1:22214104-22214123 None:intergenic 75.0%
! CCACCACCACCGGCGCCACG+TGG + chr6_1:22213063-22213082 None:intergenic 80.0%
!!! CCACGTGGCGCCGGTGGTGG+TGG - chr6_1:22213060-22213079 Msa0879610:CDS 80.0%
!!! GGTGGTGGTGGCGGCGGTGG+AGG + chr6_1:22214098-22214117 None:intergenic 80.0%
!!! GGAGGTGGTGGTGGCGGCGG+TGG + chr6_1:22214101-22214120 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr6_1 gene 22212272 22217368 22212272 ID=Msa0879610;Name=Msa0879610
chr6_1 mRNA 22212272 22217368 22212272 ID=Msa0879610-mRNA-1;Parent=Msa0879610;Name=Msa0879610-mRNA-1;_AED=0.02;_eAED=0.02;_QI=182|1|1|1|1|1|4|656|1070
chr6_1 exon 22212272 22213737 22212272 ID=Msa0879610-mRNA-1:exon:6063;Parent=Msa0879610-mRNA-1
chr6_1 exon 22213827 22214071 22213827 ID=Msa0879610-mRNA-1:exon:6062;Parent=Msa0879610-mRNA-1
chr6_1 exon 22214809 22215008 22214809 ID=Msa0879610-mRNA-1:exon:6061;Parent=Msa0879610-mRNA-1
chr6_1 exon 22215229 22217368 22215229 ID=Msa0879610-mRNA-1:exon:6060;Parent=Msa0879610-mRNA-1
chr6_1 five_prime_UTR 22217187 22217368 22217187 ID=Msa0879610-mRNA-1:five_prime_utr;Parent=Msa0879610-mRNA-1
chr6_1 CDS 22215229 22217186 22215229 ID=Msa0879610-mRNA-1:cds;Parent=Msa0879610-mRNA-1
chr6_1 CDS 22214809 22215008 22214809 ID=Msa0879610-mRNA-1:cds;Parent=Msa0879610-mRNA-1
chr6_1 CDS 22213827 22214071 22213827 ID=Msa0879610-mRNA-1:cds;Parent=Msa0879610-mRNA-1
chr6_1 CDS 22212928 22213737 22212928 ID=Msa0879610-mRNA-1:cds;Parent=Msa0879610-mRNA-1
chr6_1 three_prime_UTR 22212272 22212927 22212272 ID=Msa0879610-mRNA-1:three_prime_utr;Parent=Msa0879610-mRNA-1
Gene Sequence

>Msa0879610

ATGTGCTATTACTCTTTCTTCTTCTTCTTCTTATGCATTCTCATCTTCTTCAAACCAATCTCATCAAATGAACCGAGAAGATTCCTTCATCAACCTTTTCCACAAAACAACAATCTCTCACCTTCACAACCTCCTTCACCATCACCTCCTTCATCACCACCTCCATCACCAAATCCAAAATACCCATTTTCTACTACACCCCCCAACACTTCATCTTCTTCTTCTACACCTCCTTTTTTCCCTACATACCCCTCAACCCCACCACCACCTTCACCTTCTTCCTTTGCTTCATTCCCAGCTAACATTTCATCTCTAACTATCCCACAAACCCAAAAAACCAAATCATCTTCTTCCAAACTCCTCGCCGTCGCCATTACGGCCGTCATCGCCGCCGTCGCTGTCGTCGCAATCTCAGCTTTCGTTTACTGTCGCAGAAGTCGCAATAAAAGTTTCTTAGCTGATGATAAAACACTCAGATCCGACAGTAGTATTCGTCTCTTCCCTCGCGACGGTGGCGTCCCTACCGTCGCTAAATCGAGAAACGTTTCTTCGGAGTTTCTTTACCTTGGTACTATTGCTAACTCTCGTGGCGATGAACTACCTGATCCACGTGGCGCCGGTGGTGGTGGTCGGAATTCAAGAAAAATGGACTCGCCGGAGCTACAGCCGTTACCGCCGCTTATGCGACAAAGCTCGATGTACGATGAAGGTAATGGTGGTGCTACTGTTACTGCTGGTGAAGATGATGAAGAAGAGTTTTATTCTCCAAGAGGTTCTTTGAACGGAAATGGGTCGGGTTCTCGGAGAGTTTTCGCCGGAATTTCAGCTGAGAATTTGGTGGGTCGAAGTAGCAGTGAATCTACTTCGTCATCTTCTTCGTATTCATCTTCTTCTGCTTCACCGGGTCGTTCTCATTCGATCAGTCTCTCTCCACCGGTGAGTTTGAGTCCAAGAAGATCACAACCAAAGTCGCCGGAAAATGTTGTAACTCCGGCACCGACACAGCCACTACTTGTTAATGACGTTGGAAGAAGCTCGTTGTCGTCGTCACGAGCTTCTTCTAACCGTCACGTGCAGTCTTGTTCTTCAATGTCTTCATCTCCGGAGAAAATCTTCGCCGGAGAATGTAAGTCACCGTCTTTATCACCGTTGAATCTTTCACCGACGAAAAATTTAGATGGGTCTTTTGTAAAAGTTGAAAAGACTCAATCTTGTAATGAAGATGGTTCTTCTTCGCCGAGATTATCGAATGCTTCTAGTGGTAAATCATCGTCTTCTTCATCGTCGGCGTTTACTTTACCATCGCCGGAAAAGATGACGATGATGAATCTTCATAGCAATCATGGGTTGGATCAGTCTCCAACAATTTCTGATGTTTCAGATCGGTTTAGACATTCTCCTCTTTCATCATTGCCACTTTCACCAACGCTTCTTTCATCGCCGGAGAGAGATATAATGAGCACTCAACCACCACCACCGCCTCCGCAACCAGCTTCTAGGAAGCATTGGGAGATTCCTGACTTGTTAACACCAATTGCTGAATCACCAACTGTTTTGATTCAGAACGGTGTTTCTCAGAGAAAACAATGGGAAATTCCTGTTCTTTCAACACCAATTACACCTGCTAATAGAGTTTCAGCTCCTCCACCGCCGCCACCACCACCTCCACCTCCACTGGCAATGCCGATGAAGCAGCGGAAGCAATGGGAAGTACCTTCTCCAACAACTCCTGTTGGTCAACCGGTGGTTTGTAGGCCGCCGGAATTGAAACCTCCTTCAAGGCCTTTTGTGTTGCAAACTCCTTCAAATACATTGGTTTCTCCGGTTGAGTTACCACCTAGTTTTGAGGAGAATGAAGAGGTTTCTAAACCAAAGTTGAAGCCTTTGCATTGGGATAAAGTGAGGGCTAGTTCCGATCGTGAAATGGTTTGGGATCATTTGAGGTCCAGCTCTTTTAAGTTGAATGAGGAGATGATAGAAACATTATTTGTGGTGAATACACCAAATCCAAAACCAAAGGATGCTACTCCACGTTCAGTTCTTACACCTCCAAGTCACGAGGATAGGGTATTGGATCCGAAAAAGTCTCAAAATATTGCTATCTTGCTTCGAGCGGTTAATGTTACGGTAGAGGAAGTGTGTGAAGCACTGTTGGAAGGTGTTACTGATACACTTGGAACTGAACTACTTGAAAGCTTATTAAAAATGGCGCCAAGCAAGGAAGAAGAGCGCAAATTGAAGGAACATAAAGACGACTCTCCAAACAAACTCGGTTCTGCTGAGAAATTTTTGAAGGCAGTTCTCGATGTACCTTTTGCATTTAAAAGGGTGGAAGCTATGCTTTACATAGCCAATTTTGAATCTGAAGTGGAGTATATTCGTAAATCCTTTCAGACTCTAGAGGTTGCATGTGAAGAGCTGCGAAACAGTAGAATGTTCTTGAAGCTTCTAGAGGCCGTGCTCAAAACTGGGAACCGCATGAATGTTGGAACAAATCGAGGTGATGCGCATGCATTCAAGCTCGATACACTTCTCAAGCTGGTTGACGTTAAAGGTGCAGATGGTAAAACAACTCTTCTACACTTTGTTGTACAAGAAATCATTAGAACAGAAGGAGCTCGTCATTCAGATACTTCTACTAATCAAACACCGAGCGCAACATTGAGTGACGATGCCAAGTGCAGAAGACTTGGTCTTCAAGTAGTATCTAGTCTAAGTTCCGATCTAGCGAATGTGAAGAAGGCCGCGACAATGGACTCCGAAGTCCTCACGAGCGAAGTCTCTAAACTTTCAAAAGGAATCACACACATCGCCGAGATTGTAAAATTGAATCAAACTGCGGGATCAGATGAAACCGTTCGTAAATTCGCAGAATCAATGAACAAGTTTATGAGGATGGCTGAGGAGGAGATTTTAAGAATTCAAGCACAAGAAAGTGTTGCTTTATCACTTGTGAAAGAGATCACAGAGTATTTTCATGGTAACTTATCTAAAGAAGAAGCTCATCCATTTAGAATCTTCATGGTAGTAAGAGACTTCTTAACAGTTCTTGATAGGGTATGTAAAGAAGTTGGTAATATAAATGAAAGGACCATGATTAGTTCTGCTCATAGATTTCCTGTTCCAGTGAACCCTATGCTTCCACAACCACTTCCTGGATTACATGGAAAGAGACATTACAGTTCCTCGGATGATGATAGTTCATCTCCTTAG
Protein sequence

>Msa0879610

MCYYSFFFFFLCILIFFKPISSNEPRRFLHQPFPQNNNLSPSQPPSPSPPSSPPPSPNPKYPFSTTPPNTSSSSSTPPFFPTYPSTPPPPSPSSFASFPANISSLTIPQTQKTKSSSSKLLAVAITAVIAAVAVVAISAFVYCRRSRNKSFLADDKTLRSDSSIRLFPRDGGVPTVAKSRNVSSEFLYLGTIANSRGDELPDPRGAGGGGRNSRKMDSPELQPLPPLMRQSSMYDEGNGGATVTAGEDDEEEFYSPRGSLNGNGSGSRRVFAGISAENLVGRSSSESTSSSSSYSSSSASPGRSHSISLSPPVSLSPRRSQPKSPENVVTPAPTQPLLVNDVGRSSLSSSRASSNRHVQSCSSMSSSPEKIFAGECKSPSLSPLNLSPTKNLDGSFVKVEKTQSCNEDGSSSPRLSNASSGKSSSSSSSAFTLPSPEKMTMMNLHSNHGLDQSPTISDVSDRFRHSPLSSLPLSPTLLSSPERDIMSTQPPPPPPQPASRKHWEIPDLLTPIAESPTVLIQNGVSQRKQWEIPVLSTPITPANRVSAPPPPPPPPPPPLAMPMKQRKQWEVPSPTTPVGQPVVCRPPELKPPSRPFVLQTPSNTLVSPVELPPSFEENEEVSKPKLKPLHWDKVRASSDREMVWDHLRSSSFKLNEEMIETLFVVNTPNPKPKDATPRSVLTPPSHEDRVLDPKKSQNIAILLRAVNVTVEEVCEALLEGVTDTLGTELLESLLKMAPSKEEERKLKEHKDDSPNKLGSAEKFLKAVLDVPFAFKRVEAMLYIANFESEVEYIRKSFQTLEVACEELRNSRMFLKLLEAVLKTGNRMNVGTNRGDAHAFKLDTLLKLVDVKGADGKTTLLHFVVQEIIRTEGARHSDTSTNQTPSATLSDDAKCRRLGLQVVSSLSSDLANVKKAATMDSEVLTSEVSKLSKGITHIAEIVKLNQTAGSDETVRKFAESMNKFMRMAEEEILRIQAQESVALSLVKEITEYFHGNLSKEEAHPFRIFMVVRDFLTVLDRVCKEVGNINERTMISSAHRFPVPVNPMLPQPLPGLHGKRHYSSSDDDSSSP*