AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0880190

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0880190 MtrunA17_Chr1g0188111 99.448 181 1 0 1 181 1 181 1.17e-134 374
Msa0880190 MtrunA17_Chr5g0413451 51.934 181 87 0 1 181 1 181 1.26e-67 204
Msa0880190 MtrunA17_Chr5g0413441 51.934 181 87 0 1 181 1 181 1.26e-67 204
Msa0880190 MtrunA17_Chr6g0450081 51.934 181 87 0 1 181 1 181 1.39e-67 204
Msa0880190 MtrunA17_Chr1g0194261 51.934 181 87 0 1 181 1 181 1.64e-67 204
Msa0880190 MtrunA17_Chr7g0270301 51.381 181 88 0 1 181 1 181 4.79e-67 202
Msa0880190 MtrunA17_Chr5g0401761 50.000 180 90 0 1 180 1 180 2.22e-65 198
Msa0880190 MtrunA17_Chr5g0395631 51.149 174 85 0 1 174 1 174 5.09e-62 190
Msa0880190 MtrunA17_Chr4g0039591 50.575 174 86 0 1 174 1 174 8.85e-61 187
Msa0880190 MtrunA17_Chr4g0072861 48.276 174 90 0 1 174 1 174 1.67e-60 186
Msa0880190 MtrunA17_Chr5g0395641 47.253 182 94 1 1 180 1 182 3.16e-56 175
Msa0880190 MtrunA17_Chr8g0373271 39.264 163 98 1 19 180 18 180 1.55e-39 132
Msa0880190 MtrunA17_Chr2g0287721 34.973 183 106 2 1 173 1 180 2.49e-32 115
Msa0880190 MtrunA17_Chr5g0434561 38.028 142 87 1 12 152 14 155 2.64e-28 103
Msa0880190 MtrunA17_Chr5g0401071 35.811 148 82 2 12 152 14 155 9.33e-25 95.1
Msa0880190 MtrunA17_Chr7g0271761 35.088 171 99 2 16 174 19 189 1.31e-23 92.4
Msa0880190 MtrunA17_Chr4g0012371 34.058 138 84 2 19 152 2 136 7.00e-23 89.7
Msa0880190 MtrunA17_Chr2g0294701 40.000 130 78 0 16 145 19 148 3.45e-22 88.6
Msa0880190 MtrunA17_Chr4g0068171 34.503 171 100 2 16 174 19 189 6.81e-22 87.8
Msa0880190 MtrunA17_Chr5g0395651 54.795 73 33 0 1 73 1 73 1.10e-21 84.0
Msa0880190 MtrunA17_Chr1g0189361 33.058 121 75 3 18 133 15 134 7.92e-11 58.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0880190 AT3G22950.1 89.503 181 19 0 1 181 1 181 1.08e-121 341
Msa0880190 AT3G22950.2 89.503 181 19 0 1 181 1 181 1.08e-121 341
Msa0880190 AT1G23490.1 52.486 181 86 0 1 181 1 181 3.73e-68 206
Msa0880190 AT1G70490.2 52.486 181 86 0 1 181 1 181 3.73e-68 206
Msa0880190 AT1G70490.7 52.486 181 86 0 1 181 1 181 3.73e-68 206
Msa0880190 AT1G70490.4 52.486 181 86 0 1 181 1 181 3.73e-68 206
Msa0880190 AT1G70490.3 52.486 181 86 0 1 181 1 181 3.73e-68 206
Msa0880190 AT1G70490.1 52.486 181 86 0 1 181 1 181 3.73e-68 206
Msa0880190 AT1G70490.6 52.486 181 86 0 1 181 1 181 3.73e-68 206
Msa0880190 AT1G70490.5 52.486 181 86 0 1 181 1 181 3.73e-68 206
Msa0880190 AT1G10630.1 51.934 181 87 0 1 181 1 181 2.70e-67 203
Msa0880190 AT1G10630.2 51.934 181 87 0 1 181 1 181 2.70e-67 203
Msa0880190 AT5G14670.2 51.934 181 87 0 1 181 1 181 4.71e-67 203
Msa0880190 AT5G14670.3 51.934 181 87 0 1 181 1 181 4.71e-67 203
Msa0880190 AT3G62290.3 51.934 181 87 0 1 181 1 181 4.82e-67 203
Msa0880190 AT3G62290.1 51.934 181 87 0 1 181 1 181 4.82e-67 203
Msa0880190 AT3G62290.2 51.934 181 87 0 1 181 1 181 4.82e-67 203
Msa0880190 AT2G47170.2 51.934 181 87 0 1 181 1 181 5.31e-67 202
Msa0880190 AT2G47170.1 51.934 181 87 0 1 181 1 181 5.31e-67 202
Msa0880190 AT2G47170.3 51.934 181 87 0 1 181 1 181 5.31e-67 202
Msa0880190 AT5G14670.1 51.381 181 88 0 1 181 1 181 2.08e-66 201
Msa0880190 AT2G24765.1 49.425 174 88 0 1 174 1 174 2.05e-60 186
Msa0880190 AT5G17060.2 48.851 174 89 0 1 174 1 174 5.41e-60 185
Msa0880190 AT5G17060.1 48.851 174 89 0 1 174 1 174 5.41e-60 185
Msa0880190 AT2G15310.1 48.066 181 94 0 1 181 1 181 1.46e-59 184
Msa0880190 AT3G03120.1 49.425 174 88 0 1 174 1 174 2.07e-59 184
Msa0880190 AT2G24765.2 52.344 128 61 0 1 128 1 128 1.49e-44 144
Msa0880190 AT3G03120.2 50.000 130 65 0 1 130 1 130 2.58e-40 133
Msa0880190 AT2G18390.1 39.877 163 97 1 19 180 18 180 3.95e-40 134
Msa0880190 AT5G52210.1 34.615 182 112 1 1 175 1 182 2.06e-34 120
Msa0880190 AT5G52210.2 34.615 182 112 1 1 175 1 182 2.06e-34 120
Msa0880190 AT1G02430.1 36.216 185 104 5 1 173 1 183 4.42e-34 119
Msa0880190 AT1G02440.1 34.054 185 108 5 1 173 1 183 3.67e-31 112
Msa0880190 AT5G37680.1 36.620 142 89 1 12 152 14 155 5.12e-27 101
Msa0880190 AT1G02430.2 34.568 162 96 4 1 154 1 160 3.86e-26 98.2
Msa0880190 AT3G49870.1 35.811 148 82 2 12 152 14 155 2.64e-24 94.4
Msa0880190 AT5G67560.1 35.135 148 83 2 12 152 14 155 1.34e-23 92.4
Msa0880190 AT3G49860.1 34.043 141 92 1 13 152 7 147 1.52e-23 92.0
Msa0880190 AT3G62560.1 33.918 171 101 1 16 174 19 189 1.04e-22 90.1
Msa0880190 AT3G49870.2 35.461 141 78 2 19 152 2 136 1.89e-22 89.0
Msa0880190 AT5G37680.2 34.646 127 80 1 47 170 3 129 2.56e-22 87.8
Msa0880190 AT4G02080.1 33.333 171 102 1 16 174 19 189 4.56e-22 88.6
Msa0880190 AT1G56330.1 40.000 130 78 0 16 145 19 148 2.42e-21 86.7
Msa0880190 AT1G09180.1 40.000 130 78 0 16 145 19 148 5.56e-20 83.2
Msa0880190 AT1G02440.2 27.742 155 76 4 1 154 1 120 1.27e-14 67.4

Find 77 sgRNAs with CRISPR-Local

Find 477 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAATTAATTATTAATTAATT+TGG 0.065801 6_1:+26691392 Msa0880190:five_prime_UTR
GATAGTTGTAGTTGATTAAA+AGG 0.099548 6_1:+26691421 Msa0880190:five_prime_UTR
CCGATTTGATTTGGCGATTT+GGG 0.232061 6_1:-26691172 None:intergenic
GGCTTCTTTCTATAACAATT+TGG 0.253823 6_1:-26697028 None:intergenic
ACCGATTTGATTTGGCGATT+TGG 0.267331 6_1:-26691173 None:intergenic
TCATTTCAGGTCTGGGATCT+TGG 0.315908 6_1:+26696490 Msa0880190:intron
AATTAATTATTAATTAATTT+GGG 0.319901 6_1:+26691393 Msa0880190:five_prime_UTR
GGATGCAGCAAACAGATAAA+AGG 0.329957 6_1:-26697078 None:intergenic
GAATGAACACCGATTTGATT+TGG 0.333185 6_1:-26691181 None:intergenic
GCTGGGTTTCCTTGCCTTGT+TGG 0.337792 6_1:+26697126 Msa0880190:three_prime_UTR
GATGGTCTTGGATGGATTGC+CGG 0.370902 6_1:+26696808 Msa0880190:CDS
GAGTATAAGATTGTTGTTGT+TGG 0.394215 6_1:+26691496 Msa0880190:CDS
ACTCTTTATAAATTGCATCT+TGG 0.394363 6_1:+26691544 Msa0880190:CDS
GGCTTTATATGATAGCGAAT+TGG 0.402139 6_1:+26697147 Msa0880190:three_prime_UTR
AATTAGCCTATCTGTATGGC+TGG 0.404702 6_1:+26697108 Msa0880190:three_prime_UTR
TGGATTGCCGGGCGAGTAAC+CGG 0.406341 6_1:+26696820 Msa0880190:CDS
TGCTTTGCCGGTTACTCGCC+CGG 0.406522 6_1:-26696827 None:intergenic
GTTGCGATTGCGAAGAGAAT+TGG 0.416440 6_1:-26691203 None:intergenic
ACAATCTTATACTCTTTAGC+AGG 0.426577 6_1:-26691487 None:intergenic
GACGGCCTTTATGATGGTCT+TGG 0.432233 6_1:+26696796 Msa0880190:CDS
CAAGCTTGCAGCGCCCTCTC+AGG 0.432795 6_1:+26696772 Msa0880190:CDS
AAACCCACATCATGCTTTGC+CGG 0.443216 6_1:-26696839 None:intergenic
GGGCAATGATGTCTAGATTC+TGG 0.443324 6_1:+26691452 Msa0880190:CDS
TAAGATTGTTGTTGTTGGAT+TGG 0.448953 6_1:+26691501 Msa0880190:CDS
ATCCTTCATTAAAGAGATCC+TGG 0.463726 6_1:-26696599 None:intergenic
ATAGTTGTAGTTGATTAAAA+GGG 0.463809 6_1:+26691422 Msa0880190:five_prime_UTR
TCCATCCAAGACCATCATAA+AGG 0.464813 6_1:-26696801 None:intergenic
AAAGCATGATGTGGGTTTGC+TGG 0.470420 6_1:+26696844 Msa0880190:exon
CATCAATTAGCCTATCTGTA+TGG 0.484638 6_1:+26697104 Msa0880190:three_prime_UTR
TGCTAATAAACAAGATATCA+AGG 0.484675 6_1:+26696678 Msa0880190:CDS
GGAAACCCAGCCATACAGAT+AGG 0.484935 6_1:-26697114 None:intergenic
CCCAAATCGCCAAATCAAAT+CGG 0.492653 6_1:+26691172 Msa0880190:five_prime_UTR
GCCTTTATGATGGTCTTGGA+TGG 0.493098 6_1:+26696800 Msa0880190:CDS
TAGTTGATTAAAAGGGAGGA+TGG 0.496304 6_1:+26691429 Msa0880190:exon
AATATGTTGCCCATGATGTC+CGG 0.496677 6_1:-26696528 None:intergenic
AAGAAAGACTCCGGACATCA+TGG 0.503977 6_1:+26696518 Msa0880190:CDS
GTTGATTAAAAGGGAGGATG+GGG 0.505474 6_1:+26691431 Msa0880190:exon
ACAGCATCAAGGATCATGAT+TGG 0.511844 6_1:+26696743 Msa0880190:CDS
TTTCAGGTCTGGGATCTTGG+CGG 0.512294 6_1:+26696493 Msa0880190:intron
ATGGTCTTGGATGGATTGCC+GGG 0.515323 6_1:+26696809 Msa0880190:CDS
AATTCATACACACACTAGCC+TGG 0.526989 6_1:-26696955 None:intergenic
AGAGCATCAGTGATTTCAGC+AGG 0.529085 6_1:-26696712 None:intergenic
TCAGGAGACGGCCTTTATGA+TGG 0.533539 6_1:+26696790 Msa0880190:CDS
CACAGACAACGCTACCTCCC+AGG 0.538657 6_1:+26691225 Msa0880190:five_prime_UTR
TGCAGCGCCCTCTCAGGAGA+CGG 0.539815 6_1:+26696778 Msa0880190:CDS
TTATAAATTGCATCTTGGTG+AGG 0.541529 6_1:+26691549 Msa0880190:CDS
AGCCAGGATCTCTTTAATGA+AGG 0.547926 6_1:+26696597 Msa0880190:CDS
GTTGTAGTTGATTAAAAGGG+AGG 0.548123 6_1:+26691425 Msa0880190:five_prime_UTR
TCGACGTTGCTACCAACAGT+AGG 0.548630 6_1:-26691586 None:intergenic
TGTGGGTTTGCTGGAAACTA+AGG 0.552981 6_1:+26696853 Msa0880190:three_prime_UTR
AGTTGATTAAAAGGGAGGAT+GGG 0.553148 6_1:+26691430 Msa0880190:exon
TCGACAGCAGTGATAGAGCC+AGG 0.557461 6_1:+26696581 Msa0880190:CDS
CATAAAGGCCGTCTCCTGAG+AGG 0.561891 6_1:-26696786 None:intergenic
ATTAGCCTATCTGTATGGCT+GGG 0.562189 6_1:+26697109 Msa0880190:three_prime_UTR
CATATAAAGCCAACAAGGCA+AGG 0.562323 6_1:-26697135 None:intergenic
CTTGTTTATTAGCAAAGACA+AGG 0.566607 6_1:-26696669 None:intergenic
ATATTTCAAAGAATCAAGCC+AGG 0.572391 6_1:+26696937 Msa0880190:three_prime_UTR
CAATTACAGCATGAGTTCCT+CGG 0.575990 6_1:-26696552 None:intergenic
CCTCTGCATTGCATGCACCT+TGG 0.577104 6_1:+26697049 Msa0880190:three_prime_UTR
TCTGTCACTTCACAGCATCA+AGG 0.579384 6_1:+26696732 Msa0880190:CDS
AAGATGCAATTTATAAAGAG+TGG 0.580200 6_1:-26691542 None:intergenic
TTGATTAAAAGGGAGGATGG+GGG 0.584384 6_1:+26691432 Msa0880190:exon
AGAAAGACTCCGGACATCAT+GGG 0.590125 6_1:+26696519 Msa0880190:CDS
ATAAAGGCCGTCTCCTGAGA+GGG 0.592089 6_1:-26696785 None:intergenic
CGACGTTGCTACCAACAGTA+GGG 0.595721 6_1:-26691585 None:intergenic
GTTACTACTAACCCTACTGT+TGG 0.624128 6_1:+26691574 Msa0880190:CDS
CAGATAGGCTAATTGATGAG+AGG 0.628286 6_1:-26697099 None:intergenic
TTGGCGGACAAGAAAGACTC+CGG 0.636413 6_1:+26696509 Msa0880190:CDS
CAGATAAAAGGAAGTGACCA+AGG 0.637812 6_1:-26697066 None:intergenic
TAACCGGCAAAGCATGATGT+GGG 0.639528 6_1:+26696836 Msa0880190:exon
CAATCTTATACTCTTTAGCA+GGG 0.643634 6_1:-26691486 None:intergenic
GTAACCGGCAAAGCATGATG+TGG 0.646220 6_1:+26696835 Msa0880190:exon
CCAAGGTGCATGCAATGCAG+AGG 0.647435 6_1:-26697049 None:intergenic
GTTGTTGGATTGGATAACGC+TGG 0.661294 6_1:+26691511 Msa0880190:CDS
GCTATCATATAAAGCCAACA+AGG 0.696600 6_1:-26697140 None:intergenic
AGAAAATGATCGAACCTGGG+AGG 0.696640 6_1:-26691239 None:intergenic
TCATGGGCAACATATTACCG+AGG 0.738917 6_1:+26696535 Msa0880190:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAATTAATTATTAATTAATT+TGG + chr6_1:26691392-26691411 Msa0880190:five_prime_UTR 0.0%
!! AATTAATTATTAATTAATTT+GGG + chr6_1:26691393-26691412 Msa0880190:five_prime_UTR 0.0%
!!! GTTTAATTTAATTGATATAA+TGG - chr6_1:26693720-26693739 None:intergenic 10.0%
!! ACATAATCAAATGAATTAAT+CGG - chr6_1:26691350-26691369 None:intergenic 15.0%
!! ACATAAGTTAAAAGAAAAAT+TGG + chr6_1:26691847-26691866 Msa0880190:intron 15.0%
!! GAATATACAAGATAATTATA+AGG + chr6_1:26691869-26691888 Msa0880190:intron 15.0%
!! TAAGAAAATAGAAGATTAAA+TGG + chr6_1:26692884-26692903 Msa0880190:intron 15.0%
!! AAGAAAATAGAAGATTAAAT+GGG + chr6_1:26692885-26692904 Msa0880190:intron 15.0%
!! AAATTGTACTTAGAATTTAT+AGG - chr6_1:26692995-26693014 None:intergenic 15.0%
!! ATATTCATATTTACTTCAAT+AGG + chr6_1:26693930-26693949 Msa0880190:intron 15.0%
!! AATTTACTATAGTAGTAAAA+TGG - chr6_1:26694803-26694822 None:intergenic 15.0%
!!! ATTTTATTAGGAAAAAATGT+GGG - chr6_1:26695039-26695058 None:intergenic 15.0%
!!! AATTTTATTAGGAAAAAATG+TGG - chr6_1:26695040-26695059 None:intergenic 15.0%
!!! AAAATTTAGGTTGAAAAAAA+TGG - chr6_1:26696058-26696077 None:intergenic 15.0%
!! ATAGTTGTAGTTGATTAAAA+GGG + chr6_1:26691422-26691441 Msa0880190:five_prime_UTR 20.0%
!! AAAGATTGTTCCTTTATATT+TGG + chr6_1:26691910-26691929 Msa0880190:intron 20.0%
!! TATAGGATAAATAGTGTTAT+AGG + chr6_1:26691970-26691989 Msa0880190:intron 20.0%
!! TTACACATTAACATGAATTT+GGG + chr6_1:26692664-26692683 Msa0880190:intron 20.0%
!!! TGATGGATATACATATAATA+CGG - chr6_1:26692960-26692979 None:intergenic 20.0%
!! ACATCTTATGTAAATTCTAA+TGG - chr6_1:26693246-26693265 None:intergenic 20.0%
!! ATACTATATTTATTCCAACA+TGG - chr6_1:26693345-26693364 None:intergenic 20.0%
!! AAAATCATAAAAACAAACTC+TGG + chr6_1:26693449-26693468 Msa0880190:intron 20.0%
!! TTACTACATTTGAACTTATT+TGG - chr6_1:26694162-26694181 None:intergenic 20.0%
!! TATGTCATGATATTAGTATT+AGG + chr6_1:26694537-26694556 Msa0880190:intron 20.0%
!! AGTTATTCATGATCATAATA+TGG + chr6_1:26694705-26694724 Msa0880190:intron 20.0%
!!! ATTTTAATTATTTTTCCCCT+TGG - chr6_1:26695005-26695024 None:intergenic 20.0%
!! TTAATTTATTTGTTCAACCT+GGG - chr6_1:26695232-26695251 None:intergenic 20.0%
!! ATGATTCAACTCAATTAATT+GGG - chr6_1:26695342-26695361 None:intergenic 20.0%
!! AATGATTCAACTCAATTAAT+TGG - chr6_1:26695343-26695362 None:intergenic 20.0%
!!! GAAATTAATGCTTTGAAAAT+CGG - chr6_1:26695752-26695771 None:intergenic 20.0%
!!! GTACCATTTAAATTTTCTTA+GGG + chr6_1:26695879-26695898 Msa0880190:intron 20.0%
!!! ATGTGTTTTTAAACTACATT+TGG + chr6_1:26696404-26696423 Msa0880190:intron 20.0%
! GATAGTTGTAGTTGATTAAA+AGG + chr6_1:26691421-26691440 Msa0880190:five_prime_UTR 25.0%
! AAGATGCAATTTATAAAGAG+TGG - chr6_1:26691545-26691564 None:intergenic 25.0%
! ACTCTTTATAAATTGCATCT+TGG + chr6_1:26691544-26691563 Msa0880190:CDS 25.0%
! AAATGATGATAAACTGGTAA+GGG - chr6_1:26691650-26691669 None:intergenic 25.0%
! AAAATGATGATAAACTGGTA+AGG - chr6_1:26691651-26691670 None:intergenic 25.0%
! ATAGCAAAATGATGATAAAC+TGG - chr6_1:26691656-26691675 None:intergenic 25.0%
!! TTGTTGATCAAAGTTTTCAT+TGG + chr6_1:26691736-26691755 Msa0880190:intron 25.0%
! CAAATATTAGCGTTCATATT+TGG + chr6_1:26691792-26691811 Msa0880190:intron 25.0%
! TGACAAATATAATCACATTG+TGG - chr6_1:26692305-26692324 None:intergenic 25.0%
!! TTTTTACCATTGAACTGTTT+TGG + chr6_1:26692352-26692371 Msa0880190:intron 25.0%
! AATTTGATTGCTAGAATAGT+TGG + chr6_1:26692430-26692449 Msa0880190:intron 25.0%
! AAAGAAAGACAACTTTAGAT+TGG - chr6_1:26692469-26692488 None:intergenic 25.0%
!!! TCTAAAGTTGTCTTTCTTTT+TGG + chr6_1:26692470-26692489 Msa0880190:intron 25.0%
! ACCTTATTGATAGAAGTTAA+GGG + chr6_1:26692508-26692527 Msa0880190:intron 25.0%
! CACAAAATTAAAGATGTTGT+GGG - chr6_1:26692617-26692636 None:intergenic 25.0%
! CTTACACATTAACATGAATT+TGG + chr6_1:26692663-26692682 Msa0880190:intron 25.0%
! AGTAGCGTAATAGATTAATT+GGG - chr6_1:26693079-26693098 None:intergenic 25.0%
! AAGTAGCGTAATAGATTAAT+TGG - chr6_1:26693080-26693099 None:intergenic 25.0%
! AATTAATCTATTACGCTACT+TGG + chr6_1:26693079-26693098 Msa0880190:intron 25.0%
! TTTACATATTGCATCCAATA+TGG - chr6_1:26693485-26693504 None:intergenic 25.0%
!!! GCTTTTTTCTTAAATAGAGA+AGG - chr6_1:26694038-26694057 None:intergenic 25.0%
! TGCATATTTAAATGCAGATT+GGG - chr6_1:26694286-26694305 None:intergenic 25.0%
! TTGCATATTTAAATGCAGAT+TGG - chr6_1:26694287-26694306 None:intergenic 25.0%
! TACTAATATCATGACATATC+AGG - chr6_1:26694535-26694554 None:intergenic 25.0%
!!! AAATATGCTTGATATTTTGG+AGG - chr6_1:26694606-26694625 None:intergenic 25.0%
!! AAAGATCAGAATTGTTACTT+CGG - chr6_1:26694634-26694653 None:intergenic 25.0%
! ATTAGCAATATTCAGATTCT+AGG + chr6_1:26694820-26694839 Msa0880190:intron 25.0%
! CTTAATTTATTTGTTCAACC+TGG - chr6_1:26695233-26695252 None:intergenic 25.0%
!! ATCACTGTTAAATTTTGCTA+CGG + chr6_1:26695258-26695277 Msa0880190:intron 25.0%
! TACTGAAGAAATTAAGATCA+AGG + chr6_1:26695310-26695329 Msa0880190:intron 25.0%
! TGATTCAACTCAATTAATTG+GGG - chr6_1:26695341-26695360 None:intergenic 25.0%
! TTAAAGTGAGTAGAATTTGT+TGG + chr6_1:26695431-26695450 Msa0880190:intron 25.0%
!! TCATGATTTAATTGGTTCAA+CGG - chr6_1:26695699-26695718 None:intergenic 25.0%
! TTTCTGGATCATGATTTAAT+TGG - chr6_1:26695707-26695726 None:intergenic 25.0%
!! GGTACCATTTAAATTTTCTT+AGG + chr6_1:26695878-26695897 Msa0880190:intron 25.0%
! TAGCCCTAAGAAAATTTAAA+TGG - chr6_1:26695885-26695904 None:intergenic 25.0%
!!! GTGCTGATTAGAAAAAATTT+AGG - chr6_1:26696071-26696090 None:intergenic 25.0%
! ACTGAGTACTAAATTAGAAA+AGG - chr6_1:26696353-26696372 None:intergenic 25.0%
! TTTAAAAACACATGCATACA+TGG - chr6_1:26696397-26696416 None:intergenic 25.0%
! TGCTAATAAACAAGATATCA+AGG + chr6_1:26696678-26696697 Msa0880190:CDS 25.0%
! ACGTAGATAGTTCTTTTCTT+CGG + chr6_1:26691125-26691144 Msa0880190:five_prime_UTR 30.0%
ATTATGTGATTATTCGCTTC+AGG + chr6_1:26691363-26691382 Msa0880190:intron 30.0%
CAATCTTATACTCTTTAGCA+GGG - chr6_1:26691489-26691508 None:intergenic 30.0%
ACAATCTTATACTCTTTAGC+AGG - chr6_1:26691490-26691509 None:intergenic 30.0%
! GAGTATAAGATTGTTGTTGT+TGG + chr6_1:26691496-26691515 Msa0880190:CDS 30.0%
! TAAGATTGTTGTTGTTGGAT+TGG + chr6_1:26691501-26691520 Msa0880190:CDS 30.0%
TTATAAATTGCATCTTGGTG+AGG + chr6_1:26691549-26691568 Msa0880190:CDS 30.0%
TCCTTTATATTTGGTTGTTG+TGG + chr6_1:26691919-26691938 Msa0880190:intron 30.0%
ACCACAACAACCAAATATAA+AGG - chr6_1:26691923-26691942 None:intergenic 30.0%
AGGATAAATAGTGTTATAGG+CGG + chr6_1:26691973-26691992 Msa0880190:intron 30.0%
!!! TTGGTTTTACTTTGTTGTCA+GGG + chr6_1:26692057-26692076 Msa0880190:intron 30.0%
AACTTTGTATAGAAGTTGTG+TGG + chr6_1:26692188-26692207 Msa0880190:intron 30.0%
TAGATGTAAGTCCTTAAAGA+CGG - chr6_1:26692251-26692270 None:intergenic 30.0%
TTTAAGGACTTACATCTAGA+GGG + chr6_1:26692253-26692272 Msa0880190:intron 30.0%
!! GACACTTTCTTTTTGAAGAA+CGG - chr6_1:26692283-26692302 None:intergenic 30.0%
! TATCAATAAGGTGTTCTCAA+TGG - chr6_1:26692500-26692519 None:intergenic 30.0%
CACCTTATTGATAGAAGTTA+AGG + chr6_1:26692507-26692526 Msa0880190:intron 30.0%
CCTTATTGATAGAAGTTAAG+GGG + chr6_1:26692509-26692528 Msa0880190:intron 30.0%
AAATGCACATCTCCATATTA+GGG - chr6_1:26692565-26692584 None:intergenic 30.0%
AAAATGCACATCTCCATATT+AGG - chr6_1:26692566-26692585 None:intergenic 30.0%
! TAATATGGAGATGTGCATTT+TGG + chr6_1:26692565-26692584 Msa0880190:intron 30.0%
CCACAAAATTAAAGATGTTG+TGG - chr6_1:26692618-26692637 None:intergenic 30.0%
!! CCACAACATCTTTAATTTTG+TGG + chr6_1:26692615-26692634 Msa0880190:intron 30.0%
TTTATTCCAACATGGACATA+CGG - chr6_1:26693337-26693356 None:intergenic 30.0%
TATTGATCTGAACCAAAAAC+AGG + chr6_1:26693362-26693381 Msa0880190:intron 30.0%
ATTGATCTGAACCAAAAACA+GGG + chr6_1:26693363-26693382 Msa0880190:intron 30.0%
AGACTAAGAGAAAGTAAAGA+GGG - chr6_1:26693407-26693426 None:intergenic 30.0%
AAGACTAAGAGAAAGTAAAG+AGG - chr6_1:26693408-26693427 None:intergenic 30.0%
! TTTTATGATTTTTCCTCGCA+AGG - chr6_1:26693441-26693460 None:intergenic 30.0%
GGATGCAATATGTAAATGTA+AGG + chr6_1:26693489-26693508 Msa0880190:intron 30.0%
ATATGTAAATGTAAGGCTAC+TGG + chr6_1:26693496-26693515 Msa0880190:intron 30.0%
TTAAAAAAATTTGGCAGGCT+AGG - chr6_1:26693576-26693595 None:intergenic 30.0%
!!! TAGCCTGCCAAATTTTTTTA+AGG + chr6_1:26693575-26693594 Msa0880190:intron 30.0%
GCTTAGGCCTTAAAAAAATT+TGG - chr6_1:26693585-26693604 None:intergenic 30.0%
TCATATTTACTTCAATAGGC+CGG + chr6_1:26693934-26693953 Msa0880190:intron 30.0%
! AGAAGCCTATTTAGCTTAAA+AGG - chr6_1:26694002-26694021 None:intergenic 30.0%
CTCTATTTAAGAAAAAAGCC+TGG + chr6_1:26694039-26694058 Msa0880190:intron 30.0%
GAGAGAGAATCTAATTTCAT+GGG - chr6_1:26694237-26694256 None:intergenic 30.0%
ATTCTCTTTGTGATAGTCAT+TGG - chr6_1:26694396-26694415 None:intergenic 30.0%
CACAAAGAGAATTGAGTATT+TGG + chr6_1:26694404-26694423 Msa0880190:intron 30.0%
AATATCATGACATATCAGGA+GGG - chr6_1:26694531-26694550 None:intergenic 30.0%
TAATATCATGACATATCAGG+AGG - chr6_1:26694532-26694551 None:intergenic 30.0%
! GGGAAATATGCTTGATATTT+TGG - chr6_1:26694609-26694628 None:intergenic 30.0%
TGGCAATCTAATATGATTCA+GGG - chr6_1:26694783-26694802 None:intergenic 30.0%
ATGGCAATCTAATATGATTC+AGG - chr6_1:26694784-26694803 None:intergenic 30.0%
AACATTGGTAAAAATTGTCC+AGG - chr6_1:26694862-26694881 None:intergenic 30.0%
TTTCTAACTAGCTGTTTAGA+TGG - chr6_1:26694943-26694962 None:intergenic 30.0%
! CAGTCTGACGAAATTTTATT+AGG - chr6_1:26695051-26695070 None:intergenic 30.0%
GATTCAACTCAATTAATTGG+GGG - chr6_1:26695340-26695359 None:intergenic 30.0%
! GTTGAATCATTGATAGTTGA+AGG + chr6_1:26695352-26695371 Msa0880190:intron 30.0%
CTTTAAATCACAGCTAAAAC+AGG - chr6_1:26695417-26695436 None:intergenic 30.0%
!!! TTAGGGGATATTTTGTTTTG+TGG + chr6_1:26695493-26695512 Msa0880190:intron 30.0%
AAAATGACCACCAAATGTTT+GGG - chr6_1:26695584-26695603 None:intergenic 30.0%
AAAAATGACCACCAAATGTT+TGG - chr6_1:26695585-26695604 None:intergenic 30.0%
!!! ATTTGGTGGTCATTTTTTAG+TGG + chr6_1:26695588-26695607 Msa0880190:intron 30.0%
!!! TTTGGTGGTCATTTTTTAGT+GGG + chr6_1:26695589-26695608 Msa0880190:intron 30.0%
!!! TTCATTGCATTTTTTCAGCT+TGG - chr6_1:26695616-26695635 None:intergenic 30.0%
TGCTTATTGGAATACATTGT+TGG + chr6_1:26696254-26696273 Msa0880190:intron 30.0%
GCTTATTGGAATACATTGTT+GGG + chr6_1:26696255-26696274 Msa0880190:intron 30.0%
TAGAAAAGGATAATGCTTAC+TGG - chr6_1:26696339-26696358 None:intergenic 30.0%
! TTTTTAAACTACATTTGGCG+CGG + chr6_1:26696409-26696428 Msa0880190:intron 30.0%
TTGTGCAAAATAGTAAAGCT+AGG - chr6_1:26696442-26696461 None:intergenic 30.0%
TCGAATTTGTCATTCATTTC+AGG + chr6_1:26696477-26696496 Msa0880190:intron 30.0%
! TAATGAAGGATGAACTTTTC+AGG + chr6_1:26696611-26696630 Msa0880190:CDS 30.0%
CTTGTTTATTAGCAAAGACA+AGG - chr6_1:26696672-26696691 None:intergenic 30.0%
ATATTTCAAAGAATCAAGCC+AGG + chr6_1:26696937-26696956 Msa0880190:three_prime_UTR 30.0%
GGCTTCTTTCTATAACAATT+TGG - chr6_1:26697031-26697050 None:intergenic 30.0%
!! GAATGAACACCGATTTGATT+TGG - chr6_1:26691184-26691203 None:intergenic 35.0%
GAAAGAAAATGATCGAACCT+GGG - chr6_1:26691245-26691264 None:intergenic 35.0%
AGAAAGAAAATGATCGAACC+TGG - chr6_1:26691246-26691265 None:intergenic 35.0%
! GAATAAAGCGTTTATTGCGT+TGG - chr6_1:26691296-26691315 None:intergenic 35.0%
GTTGTAGTTGATTAAAAGGG+AGG + chr6_1:26691425-26691444 Msa0880190:five_prime_UTR 35.0%
TAGTTGATTAAAAGGGAGGA+TGG + chr6_1:26691429-26691448 Msa0880190:exon 35.0%
AGTTGATTAAAAGGGAGGAT+GGG + chr6_1:26691430-26691449 Msa0880190:exon 35.0%
! CTACAAAAACATTCGATTCG+AGG + chr6_1:26691618-26691637 Msa0880190:CDS 35.0%
GAACGCTAATATTTGCTTGA+GGG - chr6_1:26691787-26691806 None:intergenic 35.0%
TGAACGCTAATATTTGCTTG+AGG - chr6_1:26691788-26691807 None:intergenic 35.0%
!! TTGTGGTTTGTTAACCATCA+GGG + chr6_1:26691936-26691955 Msa0880190:intron 35.0%
ACACTTGAGTGTAAGATCTA+TGG + chr6_1:26692030-26692049 Msa0880190:intron 35.0%
! GTGTAAGATCTATGGTTTGT+TGG + chr6_1:26692038-26692057 Msa0880190:intron 35.0%
!!! GTTGGTTTTACTTTGTTGTC+AGG + chr6_1:26692056-26692075 Msa0880190:intron 35.0%
ATGATTAGAATCATGAGCAG+TGG + chr6_1:26692107-26692126 Msa0880190:intron 35.0%
ACTATAGCAGCAATGAAGAT+TGG - chr6_1:26692214-26692233 None:intergenic 35.0%
! CTTTAAGGACTTACATCTAG+AGG + chr6_1:26692252-26692271 Msa0880190:intron 35.0%
CCCCTTAACTTCTATCAATA+AGG - chr6_1:26692512-26692531 None:intergenic 35.0%
! ATTTTGTGGAGTTTAAGTCG+TGG + chr6_1:26692629-26692648 Msa0880190:intron 35.0%
CCTCAAGAAAATATTCTCCA+AGG - chr6_1:26692703-26692722 None:intergenic 35.0%
! CCTTGGAGAATATTTTCTTG+AGG + chr6_1:26692700-26692719 Msa0880190:intron 35.0%
ACCATCAATCCAAATGATGT+TGG + chr6_1:26692743-26692762 Msa0880190:intron 35.0%
ACCAACATCATTTGGATTGA+TGG - chr6_1:26692747-26692766 None:intergenic 35.0%
AGATTGCTACCAACATCATT+TGG - chr6_1:26692755-26692774 None:intergenic 35.0%
!!! GTCATACACTTGTTTTGTCT+TGG - chr6_1:26692806-26692825 None:intergenic 35.0%
AGTGGATCAGCAATAAAAGA+TGG + chr6_1:26692853-26692872 Msa0880190:intron 35.0%
ATATAATACGGCAAGAGAGT+TGG - chr6_1:26692948-26692967 None:intergenic 35.0%
!! ATAGGCTTCTCTATTTCTGA+TGG - chr6_1:26692977-26692996 None:intergenic 35.0%
AGCGTAATAGATTAATTGGG+TGG - chr6_1:26693076-26693095 None:intergenic 35.0%
GGTACAATATAAGATACCCT+CGG + chr6_1:26693185-26693204 Msa0880190:intron 35.0%
GTACAATATAAGATACCCTC+GGG + chr6_1:26693186-26693205 Msa0880190:intron 35.0%
! ATGTTTTCACCAAGTCTCTA+AGG - chr6_1:26693212-26693231 None:intergenic 35.0%
CCATGAGAAGATTGTTTATG+AGG - chr6_1:26693284-26693303 None:intergenic 35.0%
CCTCATAAACAATCTTCTCA+TGG + chr6_1:26693281-26693300 Msa0880190:intron 35.0%
AGGCCTTAAAAAAATTTGGC+AGG - chr6_1:26693581-26693600 None:intergenic 35.0%
!!! ATTTTTTTAAGGCCTAAGCC+TGG + chr6_1:26693586-26693605 Msa0880190:intron 35.0%
CTAAAAAGTAAGCCTATGAC+AGG - chr6_1:26693619-26693638 None:intergenic 35.0%
!!! CTGTCATAGGCTTACTTTTT+AGG + chr6_1:26693617-26693636 Msa0880190:intron 35.0%
GATCACATTGCTTATTTAGC+AGG - chr6_1:26693675-26693694 None:intergenic 35.0%
! ATAGGCTTCTAAAAAAGCCT+AGG + chr6_1:26694012-26694031 Msa0880190:intron 35.0%
TTCTTAAATAGAGAAGGCCT+AGG - chr6_1:26694032-26694051 None:intergenic 35.0%
!!! AGTCTCTTTTGAGATGACTA+GGG - chr6_1:26694123-26694142 None:intergenic 35.0%
!!! AAGTCTCTTTTGAGATGACT+AGG - chr6_1:26694124-26694143 None:intergenic 35.0%
TCATCTCAAAAGAGACTTGT+TGG + chr6_1:26694126-26694145 Msa0880190:intron 35.0%
ATGTAGTAAGATCCATATCC+CGG + chr6_1:26694173-26694192 Msa0880190:intron 35.0%
ATTGCTAGATCTAGTGAAAC+CGG - chr6_1:26694195-26694214 None:intergenic 35.0%
GGAGAGAGAATCTAATTTCA+TGG - chr6_1:26694238-26694257 None:intergenic 35.0%
!! CTCGGCTATTATTAACTTGT+AGG - chr6_1:26694259-26694278 None:intergenic 35.0%
AATATGCAACATTATCAGCG+TGG + chr6_1:26694298-26694317 Msa0880190:intron 35.0%
GTATATCAAAGGGTCTCAAA+GGG - chr6_1:26694350-26694369 None:intergenic 35.0%
GAATCCTGAGGTATATCAAA+GGG - chr6_1:26694360-26694379 None:intergenic 35.0%
TGAATCCTGAGGTATATCAA+AGG - chr6_1:26694361-26694380 None:intergenic 35.0%
TCCACAACAATGATGACAAA+GGG + chr6_1:26694427-26694446 Msa0880190:intron 35.0%
ATATCATGACATATCAGGAG+GGG - chr6_1:26694530-26694549 None:intergenic 35.0%
!! TAAGCTCATTGGTTCACATA+CGG - chr6_1:26694565-26694584 None:intergenic 35.0%
GATTTATGCTGTAAGCTCAT+TGG - chr6_1:26694576-26694595 None:intergenic 35.0%
TGATCTTTGCTTGCGTAATT+TGG + chr6_1:26694646-26694665 Msa0880190:intron 35.0%
GATCTTTGCTTGCGTAATTT+GGG + chr6_1:26694647-26694666 Msa0880190:intron 35.0%
GTAATTTGGGTCTTTACACT+CGG + chr6_1:26694660-26694679 Msa0880190:intron 35.0%
TATTTATACAGAGCTGAAGC+TGG - chr6_1:26694751-26694770 None:intergenic 35.0%
CAGTTCGATCATGAAAACAT+TGG - chr6_1:26694877-26694896 None:intergenic 35.0%
! CAATGTTTTCATGATCGAAC+TGG + chr6_1:26694875-26694894 Msa0880190:intron 35.0%
!! AATTATTTTTCCCCTTGGAC+AGG - chr6_1:26695000-26695019 None:intergenic 35.0%
AAGAACCAAGATTTGTAGCA+TGG - chr6_1:26695150-26695169 None:intergenic 35.0%
!! AGTGAGTAGAATTTGTTGGA+TGG + chr6_1:26695435-26695454 Msa0880190:intron 35.0%
ATTGTTGTCGTAGTTAGGTT+AGG + chr6_1:26695459-26695478 Msa0880190:intron 35.0%
TTGTTGTCGTAGTTAGGTTA+GGG + chr6_1:26695460-26695479 Msa0880190:intron 35.0%
GATTTATGAGCCCAAACATT+TGG + chr6_1:26695571-26695590 Msa0880190:intron 35.0%
!!! TTGGTGGTCATTTTTTAGTG+GGG + chr6_1:26695590-26695609 Msa0880190:intron 35.0%
TACTTCTCTTGTAAGAAGCT+TGG + chr6_1:26695772-26695791 Msa0880190:intron 35.0%
TGGTGAGTGGTAGTAAATAA+AGG - chr6_1:26695809-26695828 None:intergenic 35.0%
! TGGGTGTTTCTAAATGAACA+TGG + chr6_1:26695856-26695875 Msa0880190:intron 35.0%
! GGGTGTTTCTAAATGAACAT+GGG + chr6_1:26695857-26695876 Msa0880190:intron 35.0%
! TTTGTCATTCATTTCAGGTC+TGG + chr6_1:26696482-26696501 Msa0880190:intron 35.0%
! TTGTCATTCATTTCAGGTCT+GGG + chr6_1:26696483-26696502 Msa0880190:intron 35.0%
ATCCTTCATTAAAGAGATCC+TGG - chr6_1:26696602-26696621 None:intergenic 35.0%
! CATCAATTAGCCTATCTGTA+TGG + chr6_1:26697104-26697123 Msa0880190:three_prime_UTR 35.0%
GCTATCATATAAAGCCAACA+AGG - chr6_1:26697143-26697162 None:intergenic 35.0%
! GGCTTTATATGATAGCGAAT+TGG + chr6_1:26697147-26697166 Msa0880190:three_prime_UTR 35.0%
!! CCGATTTGATTTGGCGATTT+GGG - chr6_1:26691175-26691194 None:intergenic 40.0%
CCCAAATCGCCAAATCAAAT+CGG + chr6_1:26691172-26691191 Msa0880190:five_prime_UTR 40.0%
!! ACCGATTTGATTTGGCGATT+TGG - chr6_1:26691176-26691195 None:intergenic 40.0%
GTTGATTAAAAGGGAGGATG+GGG + chr6_1:26691431-26691450 Msa0880190:exon 40.0%
TTGATTAAAAGGGAGGATGG+GGG + chr6_1:26691432-26691451 Msa0880190:exon 40.0%
GTTACTACTAACCCTACTGT+TGG + chr6_1:26691574-26691593 Msa0880190:CDS 40.0%
TGTTGATCTTGCTTGCTTCT+AGG + chr6_1:26691688-26691707 Msa0880190:intron 40.0%
GTTGATCTTGCTTGCTTCTA+GGG + chr6_1:26691689-26691708 Msa0880190:intron 40.0%
!! GTTGTGGTTTGTTAACCATC+AGG + chr6_1:26691935-26691954 Msa0880190:intron 40.0%
TAACCATCAGGGAGAAGAAT+TGG + chr6_1:26691947-26691966 Msa0880190:intron 40.0%
ATACCAATTCTTCTCCCTGA+TGG - chr6_1:26691953-26691972 None:intergenic 40.0%
TCAGGGAGAAGAATTGGTAT+AGG + chr6_1:26691953-26691972 Msa0880190:intron 40.0%
CAAAGACAAGGAGGAAACTA+TGG + chr6_1:26691999-26692018 Msa0880190:intron 40.0%
AATCATGAGCAGTGGCTATA+GGG + chr6_1:26692115-26692134 Msa0880190:intron 40.0%
TGCTATAGTTGCAACCTGAT+TGG + chr6_1:26692225-26692244 Msa0880190:intron 40.0%
!! ATGTGTACATCGCTTTTGAG+AGG + chr6_1:26692327-26692346 Msa0880190:intron 40.0%
GGTAGTCCAAAACAGTTCAA+TGG - chr6_1:26692361-26692380 None:intergenic 40.0%
TTGGACTACCATGAGATGAA+TGG + chr6_1:26692371-26692390 Msa0880190:intron 40.0%
AGATGAATGGCCTATACCTT+GGG + chr6_1:26692384-26692403 Msa0880190:intron 40.0%
TGGGATATTATCAGTCACCT+TGG + chr6_1:26692683-26692702 Msa0880190:intron 40.0%
AAGTGTATGACAGTGTTTCC+AGG + chr6_1:26692815-26692834 Msa0880190:intron 40.0%
AATGTCACACTCATCAAGCT+TGG + chr6_1:26693164-26693183 Msa0880190:intron 40.0%
CTGGTCATTGAAGACCATAT+TGG + chr6_1:26693468-26693487 Msa0880190:intron 40.0%
!!! TTACTTTTTAGGCCTGAGTC+TGG + chr6_1:26693628-26693647 Msa0880190:intron 40.0%
AAAAGCCTCTTACGCCAATT+AGG - chr6_1:26693960-26693979 None:intergenic 40.0%
! CCTATTTAGCTTAAAAGGCC+AGG - chr6_1:26693997-26694016 None:intergenic 40.0%
!! CCTGGCCTTTTAAGCTAAAT+AGG + chr6_1:26693994-26694013 Msa0880190:intron 40.0%
TTTAAGAAAAAAGCCTGGCC+TGG + chr6_1:26694044-26694063 Msa0880190:intron 40.0%
!!! CTTTTGAGATGACTAGGGAT+GGG - chr6_1:26694118-26694137 None:intergenic 40.0%
!!! TCTTTTGAGATGACTAGGGA+TGG - chr6_1:26694119-26694138 None:intergenic 40.0%
TTGCTAGATCTAGTGAAACC+GGG - chr6_1:26694194-26694213 None:intergenic 40.0%
GGATCAGTCTATGAGAAAAG+AGG - chr6_1:26694324-26694343 None:intergenic 40.0%
GGTATATCAAAGGGTCTCAA+AGG - chr6_1:26694351-26694370 None:intergenic 40.0%
ATGCAATAGCTTGAATCCTG+AGG - chr6_1:26694372-26694391 None:intergenic 40.0%
GTCCACAACAATGATGACAA+AGG + chr6_1:26694426-26694445 Msa0880190:intron 40.0%
ACCCTTTGTCATCATTGTTG+TGG - chr6_1:26694431-26694450 None:intergenic 40.0%
CATCTACCATGGTCTGAAAA+GGG + chr6_1:26694501-26694520 Msa0880190:intron 40.0%
!! AAGCTCATTGGTTCACATAC+GGG - chr6_1:26694564-26694583 None:intergenic 40.0%
! ATCAGAATTGTTACTTCGGC+GGG - chr6_1:26694630-26694649 None:intergenic 40.0%
! GATCAGAATTGTTACTTCGG+CGG - chr6_1:26694631-26694650 None:intergenic 40.0%
!!! CCTGTACCAGTTTTGGAAAA+CGG + chr6_1:26694973-26694992 Msa0880190:intron 40.0%
AAACGATTGAGAGGGACATA+GGG - chr6_1:26695077-26695096 None:intergenic 40.0%
AAAACGATTGAGAGGGACAT+AGG - chr6_1:26695078-26695097 None:intergenic 40.0%
GAGGAAGAAAACGATTGAGA+GGG - chr6_1:26695085-26695104 None:intergenic 40.0%
TGAGGAAGAAAACGATTGAG+AGG - chr6_1:26695086-26695105 None:intergenic 40.0%
ATTTGTAGCATGGAACAGCA+TGG - chr6_1:26695140-26695159 None:intergenic 40.0%
CTGTTCCATGCTACAAATCT+TGG + chr6_1:26695142-26695161 Msa0880190:intron 40.0%
ATCATGGTGTGAAAACTGTG+TGG - chr6_1:26695200-26695219 None:intergenic 40.0%
! CTGTTAAATTTTGCTACGGC+TGG + chr6_1:26695262-26695281 Msa0880190:intron 40.0%
ATGGCATTGTTGTCGTAGTT+AGG + chr6_1:26695454-26695473 Msa0880190:intron 40.0%
TAGTTAGGTTAGGGTTGGAT+TGG + chr6_1:26695469-26695488 Msa0880190:intron 40.0%
!! GTTAGGGTTGGATTGGTTTA+GGG + chr6_1:26695476-26695495 Msa0880190:intron 40.0%
!! TTAGGGTTGGATTGGTTTAG+GGG + chr6_1:26695477-26695496 Msa0880190:intron 40.0%
TTATGAGCCCAAACATTTGG+TGG + chr6_1:26695574-26695593 Msa0880190:intron 40.0%
TCATGATCCAGAAACTTCAG+TGG + chr6_1:26695713-26695732 Msa0880190:intron 40.0%
GATCAAACCACTGAAGTTTC+TGG - chr6_1:26695723-26695742 None:intergenic 40.0%
AACTTCAGTGGTTTGATCTC+TGG + chr6_1:26695725-26695744 Msa0880190:intron 40.0%
AAGATCGAAAGCCAAAATCG+TGG - chr6_1:26695829-26695848 None:intergenic 40.0%
!!! TGAGTCCTCTTGTTTTGAAG+AGG + chr6_1:26695940-26695959 Msa0880190:intron 40.0%
!!! GAGTCCTCTTGTTTTGAAGA+GGG + chr6_1:26695941-26695960 Msa0880190:intron 40.0%
TGGGGTAAAAACAAACAAGC+AGG - chr6_1:26695978-26695997 None:intergenic 40.0%
!!! TTGGCTGCACTGTGTTTTTT+GGG - chr6_1:26695997-26696016 None:intergenic 40.0%
! ATCGTGCTCCTCAATTTTGT+TGG - chr6_1:26696016-26696035 None:intergenic 40.0%
CATACAATAGCGCTGCTTAT+TGG + chr6_1:26696241-26696260 Msa0880190:intron 40.0%
AATATGTTGCCCATGATGTC+CGG - chr6_1:26696531-26696550 None:intergenic 40.0%
CAATTACAGCATGAGTTCCT+CGG - chr6_1:26696555-26696574 None:intergenic 40.0%
AGCCAGGATCTCTTTAATGA+AGG + chr6_1:26696597-26696616 Msa0880190:CDS 40.0%
!!! GATGAACTTTTCAGGTTGCT+GGG + chr6_1:26696619-26696638 Msa0880190:CDS 40.0%
ACAGCATCAAGGATCATGAT+TGG + chr6_1:26696743-26696762 Msa0880190:CDS 40.0%
TCCATCCAAGACCATCATAA+AGG - chr6_1:26696804-26696823 None:intergenic 40.0%
AATTCATACACACACTAGCC+TGG - chr6_1:26696958-26696977 None:intergenic 40.0%
CAGATAAAAGGAAGTGACCA+AGG - chr6_1:26697069-26697088 None:intergenic 40.0%
GGATGCAGCAAACAGATAAA+AGG - chr6_1:26697081-26697100 None:intergenic 40.0%
CAGATAGGCTAATTGATGAG+AGG - chr6_1:26697102-26697121 None:intergenic 40.0%
! AATTAGCCTATCTGTATGGC+TGG + chr6_1:26697108-26697127 Msa0880190:three_prime_UTR 40.0%
! ATTAGCCTATCTGTATGGCT+GGG + chr6_1:26697109-26697128 Msa0880190:three_prime_UTR 40.0%
CATATAAAGCCAACAAGGCA+AGG - chr6_1:26697138-26697157 None:intergenic 40.0%
GTTGCGATTGCGAAGAGAAT+TGG - chr6_1:26691206-26691225 None:intergenic 45.0%
AGAAAATGATCGAACCTGGG+AGG - chr6_1:26691242-26691261 None:intergenic 45.0%
GGGCAATGATGTCTAGATTC+TGG + chr6_1:26691452-26691471 Msa0880190:CDS 45.0%
! GTTGTTGGATTGGATAACGC+TGG + chr6_1:26691511-26691530 Msa0880190:CDS 45.0%
TATAGGCGGTGACAAAGACA+AGG + chr6_1:26691987-26692006 Msa0880190:intron 45.0%
! ACTTTGTTGTCAGGGTGACA+TGG + chr6_1:26692065-26692084 Msa0880190:intron 45.0%
GAATCATGAGCAGTGGCTAT+AGG + chr6_1:26692114-26692133 Msa0880190:intron 45.0%
TGGCTATAGGGTTTGATCGT+GGG + chr6_1:26692127-26692146 Msa0880190:intron 45.0%
! AACCTGATTGGCCGTCTTTA+AGG + chr6_1:26692237-26692256 Msa0880190:intron 45.0%
GGTATAGGCCATTCATCTCA+TGG - chr6_1:26692382-26692401 None:intergenic 45.0%
GAGATGAATGGCCTATACCT+TGG + chr6_1:26692383-26692402 Msa0880190:intron 45.0%
TTGCTGGGTAAGAGCTAGTT+TGG + chr6_1:26692407-26692426 Msa0880190:intron 45.0%
TTTGTCCCAAATCCTGCTGA+TGG - chr6_1:26692536-26692555 None:intergenic 45.0%
GACAAACGCGATCCCTAATA+TGG + chr6_1:26692550-26692569 Msa0880190:intron 45.0%
GGGACGAACATTGCAATTTG+TGG - chr6_1:26692597-26692616 None:intergenic 45.0%
!! TTGATGGTGCATCAGAAGTC+TGG - chr6_1:26692731-26692750 None:intergenic 45.0%
TGACATTTACACCAGCTTGG+AGG - chr6_1:26693151-26693170 None:intergenic 45.0%
GTGTGACATTTACACCAGCT+TGG - chr6_1:26693154-26693173 None:intergenic 45.0%
TGAAGTCCGTATGTCCATGT+TGG + chr6_1:26693328-26693347 Msa0880190:intron 45.0%
! TGTTTGAGCTGCCCTGTTTT+TGG - chr6_1:26693377-26693396 None:intergenic 45.0%
AAACAGGGCAGCTCAAACAA+AGG + chr6_1:26693378-26693397 Msa0880190:intron 45.0%
CTTATCATAGTTGCCTTGCG+AGG + chr6_1:26693425-26693444 Msa0880190:intron 45.0%
TAAGGCTACTGGTCATCTCT+AGG + chr6_1:26693507-26693526 Msa0880190:intron 45.0%
AAGGCTACTGGTCATCTCTA+GGG + chr6_1:26693508-26693527 Msa0880190:intron 45.0%
! TACTGGTCATCTCTAGGGAT+GGG + chr6_1:26693513-26693532 Msa0880190:intron 45.0%
! TCATCTCTAGGGATGGGAAT+AGG + chr6_1:26693519-26693538 Msa0880190:intron 45.0%
CTTATTTAGCAGGCCGTATC+AGG - chr6_1:26693665-26693684 None:intergenic 45.0%
! GGCGTAAGAGGCTTTTTGAA+TGG + chr6_1:26693964-26693983 Msa0880190:intron 45.0%
AGATGACTAGGGATGGGAAT+AGG - chr6_1:26694112-26694131 None:intergenic 45.0%
GATCTAGTGAAACCGGGATA+TGG - chr6_1:26694188-26694207 None:intergenic 45.0%
AAATGCAGATTGGGTCAGCT+CGG - chr6_1:26694277-26694296 None:intergenic 45.0%
TCAAAGGGTCTCAAAGGGAA+AGG - chr6_1:26694345-26694364 None:intergenic 45.0%
GAGACCCTTTGATATACCTC+AGG + chr6_1:26694353-26694372 Msa0880190:intron 45.0%
GGGTATGTCAAGTCTAGTCA+CGG + chr6_1:26694447-26694466 Msa0880190:intron 45.0%
GGTAGATGGTGAAGATTGGT+TGG - chr6_1:26694489-26694508 None:intergenic 45.0%
CCATGGTAGATGGTGAAGAT+TGG - chr6_1:26694493-26694512 None:intergenic 45.0%
CCAATCTTCACCATCTACCA+TGG + chr6_1:26694490-26694509 Msa0880190:intron 45.0%
! CCTTTTCAGACCATGGTAGA+TGG - chr6_1:26694503-26694522 None:intergenic 45.0%
CCATCTACCATGGTCTGAAA+AGG + chr6_1:26694500-26694519 Msa0880190:intron 45.0%
! TCAGAATTGTTACTTCGGCG+GGG - chr6_1:26694629-26694648 None:intergenic 45.0%
! GTTTTCATGATCGAACTGGC+TGG + chr6_1:26694879-26694898 Msa0880190:intron 45.0%
! CCGTTTTCCAAAACTGGTAC+AGG - chr6_1:26694976-26694995 None:intergenic 45.0%
! ACAGGACCGTTTTCCAAAAC+TGG - chr6_1:26694982-26695001 None:intergenic 45.0%
GTTGAAGGTTTGCGATCTGT+TGG + chr6_1:26695367-26695386 Msa0880190:intron 45.0%
TGTCGTAGTTAGGTTAGGGT+TGG + chr6_1:26695464-26695483 Msa0880190:intron 45.0%
!! GGTTAGGGTTGGATTGGTTT+AGG + chr6_1:26695475-26695494 Msa0880190:intron 45.0%
CTTGTAAGAAGCTTGGCTAC+AGG + chr6_1:26695779-26695798 Msa0880190:intron 45.0%
! ACTACCACTCACCACGATTT+TGG + chr6_1:26695815-26695834 Msa0880190:intron 45.0%
AAAGCCAAAATCGTGGTGAG+TGG - chr6_1:26695822-26695841 None:intergenic 45.0%
GCTTTCGATCTTGCTTGCTT+GGG + chr6_1:26695837-26695856 Msa0880190:intron 45.0%
!!! TGGCTGCACTGTGTTTTTTG+GGG - chr6_1:26695996-26696015 None:intergenic 45.0%
!!! GTTGGCTGCACTGTGTTTTT+TGG - chr6_1:26695998-26696017 None:intergenic 45.0%
CAGTGCAGCCAACAAAATTG+AGG + chr6_1:26696005-26696024 Msa0880190:intron 45.0%
GTCCCACTTTCCACAATACA+CGG + chr6_1:26696180-26696199 Msa0880190:intron 45.0%
TCCCACTTTCCACAATACAC+GGG + chr6_1:26696181-26696200 Msa0880190:intron 45.0%
! TCATTTCAGGTCTGGGATCT+TGG + chr6_1:26696490-26696509 Msa0880190:intron 45.0%
AAGAAAGACTCCGGACATCA+TGG + chr6_1:26696518-26696537 Msa0880190:CDS 45.0%
AGAAAGACTCCGGACATCAT+GGG + chr6_1:26696519-26696538 Msa0880190:CDS 45.0%
TCATGGGCAACATATTACCG+AGG + chr6_1:26696535-26696554 Msa0880190:CDS 45.0%
!!! GGATGAACTTTTCAGGTTGC+TGG + chr6_1:26696618-26696637 Msa0880190:CDS 45.0%
! AGAGCATCAGTGATTTCAGC+AGG - chr6_1:26696715-26696734 None:intergenic 45.0%
! TCTGTCACTTCACAGCATCA+AGG + chr6_1:26696732-26696751 Msa0880190:CDS 45.0%
! GCCTTTATGATGGTCTTGGA+TGG + chr6_1:26696800-26696819 Msa0880190:CDS 45.0%
TAACCGGCAAAGCATGATGT+GGG + chr6_1:26696836-26696855 Msa0880190:exon 45.0%
AAACCCACATCATGCTTTGC+CGG - chr6_1:26696842-26696861 None:intergenic 45.0%
AAAGCATGATGTGGGTTTGC+TGG + chr6_1:26696844-26696863 Msa0880190:exon 45.0%
!! TGTGGGTTTGCTGGAAACTA+AGG + chr6_1:26696853-26696872 Msa0880190:three_prime_UTR 45.0%
CGACGTTGCTACCAACAGTA+GGG - chr6_1:26691588-26691607 None:intergenic 50.0%
TCGACGTTGCTACCAACAGT+AGG - chr6_1:26691589-26691608 None:intergenic 50.0%
GTGGCTATAGGGTTTGATCG+TGG + chr6_1:26692126-26692145 Msa0880190:intron 50.0%
GGCTATAGGGTTTGATCGTG+GGG + chr6_1:26692128-26692147 Msa0880190:intron 50.0%
GTCCTTAAAGACGGCCAATC+AGG - chr6_1:26692242-26692261 None:intergenic 50.0%
TACCCAGCAACCCAAGGTAT+AGG - chr6_1:26692397-26692416 None:intergenic 50.0%
AAGTTAAGGGGTCCATCAGC+AGG + chr6_1:26692521-26692540 Msa0880190:intron 50.0%
!! GGAGATGTGCATTTTGGCAG+AGG + chr6_1:26692571-26692590 Msa0880190:intron 50.0%
TGCTGATCCACTGAGTCATG+AGG - chr6_1:26692845-26692864 None:intergenic 50.0%
! CTACTGGTCATCTCTAGGGA+TGG + chr6_1:26693512-26693531 Msa0880190:intron 50.0%
TCTAGGGATGGGAATAGGCT+AGG + chr6_1:26693524-26693543 Msa0880190:intron 50.0%
AAATTTGGCAGGCTAGGCTC+AGG - chr6_1:26693570-26693589 None:intergenic 50.0%
! GGCCTTCTGAAAGCCTGATA+CGG + chr6_1:26693649-26693668 Msa0880190:intron 50.0%
CTTCAATAGGCCGGCCTAAT+TGG + chr6_1:26693943-26693962 Msa0880190:intron 50.0%
! GAGGCTTTTTGAATGGCCTG+TGG + chr6_1:26693971-26693990 Msa0880190:intron 50.0%
! TTTTTGAATGGCCTGTGGCC+TGG + chr6_1:26693976-26693995 Msa0880190:intron 50.0%
! GGGAATCCCTTTTCAGACCA+TGG - chr6_1:26694510-26694529 None:intergenic 50.0%
TGTCCAGGAAAAGTTGCGTC+AGG - chr6_1:26694847-26694866 None:intergenic 50.0%
ATCGAACTGGCTGGTAGAAC+CGG + chr6_1:26694888-26694907 Msa0880190:intron 50.0%
!! ACTGGCTTGGAACCAAGTTC+GGG - chr6_1:26694916-26694935 None:intergenic 50.0%
!! GACTGGCTTGGAACCAAGTT+CGG - chr6_1:26694917-26694936 None:intergenic 50.0%
AACTTGGTTCCAAGCCAGTC+AGG + chr6_1:26694917-26694936 Msa0880190:intron 50.0%
! TTTAGATGGCCTGACTGGCT+TGG - chr6_1:26694929-26694948 None:intergenic 50.0%
AGCTGTTTAGATGGCCTGAC+TGG - chr6_1:26694934-26694953 None:intergenic 50.0%
! CGCAGAACCTGTACCAGTTT+TGG + chr6_1:26694966-26694985 Msa0880190:intron 50.0%
TTGGAAAACGGTCCTGTCCA+AGG + chr6_1:26694985-26695004 Msa0880190:intron 50.0%
TGGAAAACGGTCCTGTCCAA+GGG + chr6_1:26694986-26695005 Msa0880190:intron 50.0%
ATGGAACAGCATGGAGGAAG+GGG - chr6_1:26695131-26695150 None:intergenic 50.0%
CATGGAACAGCATGGAGGAA+GGG - chr6_1:26695132-26695151 None:intergenic 50.0%
TGTAGCATGGAACAGCATGG+AGG - chr6_1:26695137-26695156 None:intergenic 50.0%
GACGACAATGACATGCTGAG+GGG - chr6_1:26695178-26695197 None:intergenic 50.0%
GGACGACAATGACATGCTGA+GGG - chr6_1:26695179-26695198 None:intergenic 50.0%
TGGACGACAATGACATGCTG+AGG - chr6_1:26695180-26695199 None:intergenic 50.0%
TTTGTTCAACCTGGGCAGAG+TGG - chr6_1:26695224-26695243 None:intergenic 50.0%
GGTTTGCGATCTGTTGGTGT+TGG + chr6_1:26695373-26695392 Msa0880190:intron 50.0%
GGCTTTCGATCTTGCTTGCT+TGG + chr6_1:26695836-26695855 Msa0880190:intron 50.0%
CCTGCCCTCTTCAAAACAAG+AGG - chr6_1:26695948-26695967 None:intergenic 50.0%
!!! CCTCTTGTTTTGAAGAGGGC+AGG + chr6_1:26695945-26695964 Msa0880190:intron 50.0%
CCCCGTGTATTGTGGAAAGT+GGG - chr6_1:26696185-26696204 None:intergenic 50.0%
CCCACTTTCCACAATACACG+GGG + chr6_1:26696182-26696201 Msa0880190:intron 50.0%
ACCCCGTGTATTGTGGAAAG+TGG - chr6_1:26696186-26696205 None:intergenic 50.0%
TCCACAATACACGGGGTAGT+TGG + chr6_1:26696189-26696208 Msa0880190:intron 50.0%
ACCAACTACCCCGTGTATTG+TGG - chr6_1:26696193-26696212 None:intergenic 50.0%
! TTTCAGGTCTGGGATCTTGG+CGG + chr6_1:26696493-26696512 Msa0880190:intron 50.0%
! TTGGCGGACAAGAAAGACTC+CGG + chr6_1:26696509-26696528 Msa0880190:CDS 50.0%
ATAAAGGCCGTCTCCTGAGA+GGG - chr6_1:26696788-26696807 None:intergenic 50.0%
TCAGGAGACGGCCTTTATGA+TGG + chr6_1:26696790-26696809 Msa0880190:CDS 50.0%
GACGGCCTTTATGATGGTCT+TGG + chr6_1:26696796-26696815 Msa0880190:CDS 50.0%
!! GATGGTCTTGGATGGATTGC+CGG + chr6_1:26696808-26696827 Msa0880190:CDS 50.0%
!! ATGGTCTTGGATGGATTGCC+GGG + chr6_1:26696809-26696828 Msa0880190:CDS 50.0%
GTAACCGGCAAAGCATGATG+TGG + chr6_1:26696835-26696854 Msa0880190:exon 50.0%
GGAAACCCAGCCATACAGAT+AGG - chr6_1:26697117-26697136 None:intergenic 50.0%
AGGCGGTGACAAAGACAAGG+AGG + chr6_1:26691990-26692009 Msa0880190:intron 55.0%
GGGAGCAATGCAAGTAGAGC+TGG + chr6_1:26692148-26692167 Msa0880190:intron 55.0%
! TGGCCTATACCTTGGGTTGC+TGG + chr6_1:26692391-26692410 Msa0880190:intron 55.0%
! GGCCTATACCTTGGGTTGCT+GGG + chr6_1:26692392-26692411 Msa0880190:intron 55.0%
AGCTCTTACCCAGCAACCCA+AGG - chr6_1:26692403-26692422 None:intergenic 55.0%
AGGGGTCCATCAGCAGGATT+TGG + chr6_1:26692527-26692546 Msa0880190:intron 55.0%
GGGGTCCATCAGCAGGATTT+GGG + chr6_1:26692528-26692547 Msa0880190:intron 55.0%
ACTGAGTCATGAGGCATGCC+TGG - chr6_1:26692836-26692855 None:intergenic 55.0%
AGGCATGCCTCATGACTCAG+TGG + chr6_1:26692835-26692854 Msa0880190:intron 55.0%
CTCAACACTCTCCTCCAAGC+TGG + chr6_1:26693137-26693156 Msa0880190:intron 55.0%
!! ACCAAGTCTCTAAGGCCCGA+GGG - chr6_1:26693204-26693223 None:intergenic 55.0%
AGGCCTTGCAAAGCCTAGCT+CGG - chr6_1:26693550-26693569 None:intergenic 55.0%
GCTTTCAGAAGGCCAGACTC+AGG - chr6_1:26693643-26693662 None:intergenic 55.0%
GGCCGTATCAGGCTTTCAGA+AGG - chr6_1:26693654-26693673 None:intergenic 55.0%
GCCTCTTACGCCAATTAGGC+CGG - chr6_1:26693956-26693975 None:intergenic 55.0%
AGCTTAAAAGGCCAGGCCAC+AGG - chr6_1:26693990-26694009 None:intergenic 55.0%
ACTAGGGATGGGAATAGGCC+AGG - chr6_1:26694107-26694126 None:intergenic 55.0%
! GGACCTGACGCAACTTTTCC+TGG + chr6_1:26694841-26694860 Msa0880190:intron 55.0%
TCGAACTGGCTGGTAGAACC+GGG + chr6_1:26694889-26694908 Msa0880190:intron 55.0%
TTGGAACCAAGTTCGGGTCC+CGG - chr6_1:26694910-26694929 None:intergenic 55.0%
GGAAAACGGTCCTGTCCAAG+GGG + chr6_1:26694987-26695006 Msa0880190:intron 55.0%
ACAGTGAGCAAGGCAGTGTG+AGG - chr6_1:26695104-26695123 None:intergenic 55.0%
AAGGGGAACGACAGTGAGCA+AGG - chr6_1:26695114-26695133 None:intergenic 55.0%
GCATGGAACAGCATGGAGGA+AGG - chr6_1:26695133-26695152 None:intergenic 55.0%
CAATGACATGCTGAGGGGTG+TGG - chr6_1:26695173-26695192 None:intergenic 55.0%
GCTACGGCTGGAATGCATGT+AGG + chr6_1:26695274-26695293 Msa0880190:intron 55.0%
TCGACAGCAGTGATAGAGCC+AGG + chr6_1:26696581-26696600 Msa0880190:CDS 55.0%
CATAAAGGCCGTCTCCTGAG+AGG - chr6_1:26696789-26696808 None:intergenic 55.0%
CCAAGGTGCATGCAATGCAG+AGG - chr6_1:26697052-26697071 None:intergenic 55.0%
CCTCTGCATTGCATGCACCT+TGG + chr6_1:26697049-26697068 Msa0880190:three_prime_UTR 55.0%
GCTGGGTTTCCTTGCCTTGT+TGG + chr6_1:26697126-26697145 Msa0880190:three_prime_UTR 55.0%
CACAGACAACGCTACCTCCC+AGG + chr6_1:26691225-26691244 Msa0880190:five_prime_UTR 60.0%
ACCCTCGGGCCTTAGAGACT+TGG + chr6_1:26693200-26693219 Msa0880190:intron 60.0%
!! CACCAAGTCTCTAAGGCCCG+AGG - chr6_1:26693205-26693224 None:intergenic 60.0%
GGAATAGGCTAGGCCGAGCT+AGG + chr6_1:26693534-26693553 Msa0880190:intron 60.0%
AGGCCGAGCTAGGCTTTGCA+AGG + chr6_1:26693544-26693563 Msa0880190:intron 60.0%
TAAGGCCTAAGCCTGGCCTG+CGG + chr6_1:26693593-26693612 Msa0880190:intron 60.0%
GTAAGCCTATGACAGGCCGC+AGG - chr6_1:26693612-26693631 None:intergenic 60.0%
GCCGGCCTAATTGGCGTAAG+AGG + chr6_1:26693952-26693971 Msa0880190:intron 60.0%
GTAGAACCGGGACCCGAACT+TGG + chr6_1:26694901-26694920 Msa0880190:intron 60.0%
ACCATGATGCCACTCTGCCC+AGG + chr6_1:26695212-26695231 Msa0880190:intron 60.0%
ACCTGGGCAGAGTGGCATCA+TGG - chr6_1:26695216-26695235 None:intergenic 60.0%
TGGATTGCCGGGCGAGTAAC+CGG + chr6_1:26696820-26696839 Msa0880190:CDS 60.0%
! TGCTTTGCCGGTTACTCGCC+CGG - chr6_1:26696830-26696849 None:intergenic 60.0%
CCTACGGCCTAGCCTACGAC+AGG - chr6_1:26694070-26694089 None:intergenic 65.0%
CCTGTCGTAGGCTAGGCCGT+AGG + chr6_1:26694067-26694086 Msa0880190:intron 65.0%
ATAGGCCAGGCCGGCCTACA+GGG - chr6_1:26694094-26694113 None:intergenic 65.0%
AATAGGCCAGGCCGGCCTAC+AGG - chr6_1:26694095-26694114 None:intergenic 65.0%
GGGATGGGAATAGGCCAGGC+CGG - chr6_1:26694103-26694122 None:intergenic 65.0%
CAAGCTTGCAGCGCCCTCTC+AGG + chr6_1:26696772-26696791 Msa0880190:CDS 65.0%
TGCAGCGCCCTCTCAGGAGA+CGG + chr6_1:26696778-26696797 Msa0880190:CDS 65.0%
ACAGGCCGCAGGCCAGGCTT+AGG - chr6_1:26693601-26693620 None:intergenic 70.0%
CCTATGACAGGCCGCAGGCC+AGG - chr6_1:26693607-26693626 None:intergenic 70.0%
CCTGGCCTGCGGCCTGTCAT+AGG + chr6_1:26693604-26693623 Msa0880190:intron 70.0%
AGCCTGGCCTGGCCTGTCGT+AGG + chr6_1:26694055-26694074 Msa0880190:intron 70.0%
AGCCTACGACAGGCCAGGCC+AGG - chr6_1:26694060-26694079 None:intergenic 70.0%
GGCCTGGCCTGTCGTAGGCT+AGG + chr6_1:26694060-26694079 Msa0880190:intron 70.0%
GGCCTAGCCTACGACAGGCC+AGG - chr6_1:26694065-26694084 None:intergenic 70.0%
GCTAGGCCGTAGGCCCCTGT+AGG + chr6_1:26694077-26694096 Msa0880190:intron 70.0%
TAGGCCAGGCCGGCCTACAG+GGG - chr6_1:26694093-26694112 None:intergenic 70.0%
GGCCGTAGGCCCCTGTAGGC+CGG + chr6_1:26694081-26694100 Msa0880190:intron 75.0%
GGCCGGCCTACAGGGGCCTA+CGG - chr6_1:26694086-26694105 None:intergenic 75.0%
TAGGCCCCTGTAGGCCGGCC+TGG + chr6_1:26694086-26694105 Msa0880190:intron 75.0%
Chromosome Type Strat End Strand Name
chr6_1 gene 26691098 26697191 26691098 ID=Msa0880190;Name=Msa0880190
chr6_1 mRNA 26691098 26697191 26691098 ID=Msa0880190-mRNA-1;Parent=Msa0880190;Name=Msa0880190-mRNA-1;_AED=0.02;_eAED=0.02;_QI=212|1|1|1|0.5|0.33|3|339|181
chr6_1 exon 26691098 26691246 26691098 ID=Msa0880190-mRNA-1:exon:6459;Parent=Msa0880190-mRNA-1
chr6_1 exon 26691385 26691639 26691385 ID=Msa0880190-mRNA-1:exon:6460;Parent=Msa0880190-mRNA-1
chr6_1 exon 26696499 26697191 26696499 ID=Msa0880190-mRNA-1:exon:6461;Parent=Msa0880190-mRNA-1
chr6_1 five_prime_UTR 26691098 26691246 26691098 ID=Msa0880190-mRNA-1:five_prime_utr;Parent=Msa0880190-mRNA-1
chr6_1 five_prime_UTR 26691385 26691447 26691385 ID=Msa0880190-mRNA-1:five_prime_utr;Parent=Msa0880190-mRNA-1
chr6_1 CDS 26691448 26691639 26691448 ID=Msa0880190-mRNA-1:cds;Parent=Msa0880190-mRNA-1
chr6_1 CDS 26696499 26696852 26696499 ID=Msa0880190-mRNA-1:cds;Parent=Msa0880190-mRNA-1
chr6_1 three_prime_UTR 26696853 26697191 26696853 ID=Msa0880190-mRNA-1:three_prime_utr;Parent=Msa0880190-mRNA-1
Gene Sequence

>Msa0880190

ATGGGGGCAATGATGTCTAGATTCTGGTTCATGTTATTCCCTGCTAAAGAGTATAAGATTGTTGTTGTTGGATTGGATAACGCTGGTAAAACTACCACTCTTTATAAATTGCATCTTGGTGAGGTTGTTACTACTAACCCTACTGTTGGTAGCAACGTCGAAGAGCTCGTCTACAAAAACATTCGATTCGAGGTCTGGGATCTTGGCGGACAAGAAAGACTCCGGACATCATGGGCAACATATTACCGAGGAACTCATGCTGTAATTGCAGTGATCGACAGCAGTGATAGAGCCAGGATCTCTTTAATGAAGGATGAACTTTTCAGGTTGCTGGGTCATGAAGATTTACAACATTCAGTCATCCTTGTCTTTGCTAATAAACAAGATATCAAGGATGCTATGACTCCTGCTGAAATCACTGATGCTCTGTCACTTCACAGCATCAAGGATCATGATTGGCATATACAAGCTTGCAGCGCCCTCTCAGGAGACGGCCTTTATGATGGTCTTGGATGGATTGCCGGGCGAGTAACCGGCAAAGCATGA
Protein sequence

>Msa0880190

MGAMMSRFWFMLFPAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTNPTVGSNVEELVYKNIRFEVWDLGGQERLRTSWATYYRGTHAVIAVIDSSDRARISLMKDELFRLLGHEDLQHSVILVFANKQDIKDAMTPAEITDALSLHSIKDHDWHIQACSALSGDGLYDGLGWIAGRVTGKA*