Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0748480 | sp|Q55AD9|ARL5_DICDI | 60.556 | 180 | 68 | 1 | 1 | 177 | 1 | 180 | 4.71e-80 | 238 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0748480 | I3SWQ0 | 99.448 | 181 | 1 | 0 | 1 | 181 | 1 | 181 | 6.09e-131 | 374 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0026780 | Msa0748480 | 0.819380 | 1.197287e-52 | -8.615850e-47 |
| Msa0077980 | Msa0748480 | 0.951322 | 2.607692e-109 | -8.615850e-47 |
| Msa0091730 | Msa0748480 | 0.805719 | 1.165593e-49 | -8.615850e-47 |
| Msa0626920 | Msa0748480 | 0.825376 | 4.848800e-54 | -8.615850e-47 |
| Msa0651870 | Msa0748480 | 0.835233 | 1.890703e-56 | -8.615850e-47 |
| Msa0651890 | Msa0748480 | 0.837045 | 6.551459e-57 | -8.615850e-47 |
| Msa0676310 | Msa0748480 | -0.800345 | 1.505742e-48 | -8.615850e-47 |
| Msa0748480 | Msa0880190 | 0.922464 | 9.504853e-89 | -8.615850e-47 |
| Msa0748480 | Msa1191930 | 0.802011 | 6.868748e-49 | -8.615850e-47 |
| Msa0748480 | Msa1376660 | 0.829415 | 5.213141e-55 | -8.615850e-47 |
| Msa0748480 | Msa1392980 | 0.803794 | 2.940506e-49 | -8.615850e-47 |
| Msa0122530 | Msa0748480 | 0.821093 | 4.849613e-53 | -8.615850e-47 |
| Msa0186540 | Msa0748480 | 0.801127 | 1.042683e-48 | -8.615850e-47 |
| Msa0374210 | Msa0748480 | 0.830740 | 2.476625e-55 | -8.615850e-47 |
| Msa0256140 | Msa0748480 | 0.811131 | 8.163243e-51 | -8.615850e-47 |
| Msa0512640 | Msa0748480 | 0.804923 | 1.711241e-49 | -8.615850e-47 |
| Msa0578460 | Msa0748480 | 0.814738 | 1.322417e-51 | -8.615850e-47 |
| Msa0587430 | Msa0748480 | 0.815910 | 7.255622e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0748480 | MtrunA17_Chr1g0188111 | 99.448 | 181 | 1 | 0 | 1 | 181 | 1 | 181 | 1.17e-134 | 374 |
| Msa0748480 | MtrunA17_Chr5g0413451 | 51.934 | 181 | 87 | 0 | 1 | 181 | 1 | 181 | 1.26e-67 | 204 |
| Msa0748480 | MtrunA17_Chr5g0413441 | 51.934 | 181 | 87 | 0 | 1 | 181 | 1 | 181 | 1.26e-67 | 204 |
| Msa0748480 | MtrunA17_Chr6g0450081 | 51.934 | 181 | 87 | 0 | 1 | 181 | 1 | 181 | 1.39e-67 | 204 |
| Msa0748480 | MtrunA17_Chr1g0194261 | 51.934 | 181 | 87 | 0 | 1 | 181 | 1 | 181 | 1.64e-67 | 204 |
| Msa0748480 | MtrunA17_Chr7g0270301 | 51.381 | 181 | 88 | 0 | 1 | 181 | 1 | 181 | 4.79e-67 | 202 |
| Msa0748480 | MtrunA17_Chr5g0401761 | 50.000 | 180 | 90 | 0 | 1 | 180 | 1 | 180 | 2.22e-65 | 198 |
| Msa0748480 | MtrunA17_Chr5g0395631 | 51.149 | 174 | 85 | 0 | 1 | 174 | 1 | 174 | 5.09e-62 | 190 |
| Msa0748480 | MtrunA17_Chr4g0039591 | 50.575 | 174 | 86 | 0 | 1 | 174 | 1 | 174 | 8.85e-61 | 187 |
| Msa0748480 | MtrunA17_Chr4g0072861 | 48.276 | 174 | 90 | 0 | 1 | 174 | 1 | 174 | 1.67e-60 | 186 |
| Msa0748480 | MtrunA17_Chr5g0395641 | 47.253 | 182 | 94 | 1 | 1 | 180 | 1 | 182 | 3.16e-56 | 175 |
| Msa0748480 | MtrunA17_Chr8g0373271 | 39.264 | 163 | 98 | 1 | 19 | 180 | 18 | 180 | 1.55e-39 | 132 |
| Msa0748480 | MtrunA17_Chr2g0287721 | 34.973 | 183 | 106 | 2 | 1 | 173 | 1 | 180 | 2.49e-32 | 115 |
| Msa0748480 | MtrunA17_Chr5g0434561 | 38.028 | 142 | 87 | 1 | 12 | 152 | 14 | 155 | 2.64e-28 | 103 |
| Msa0748480 | MtrunA17_Chr5g0401071 | 35.811 | 148 | 82 | 2 | 12 | 152 | 14 | 155 | 9.33e-25 | 95.1 |
| Msa0748480 | MtrunA17_Chr7g0271761 | 35.088 | 171 | 99 | 2 | 16 | 174 | 19 | 189 | 1.31e-23 | 92.4 |
| Msa0748480 | MtrunA17_Chr4g0012371 | 34.058 | 138 | 84 | 2 | 19 | 152 | 2 | 136 | 7.00e-23 | 89.7 |
| Msa0748480 | MtrunA17_Chr2g0294701 | 40.000 | 130 | 78 | 0 | 16 | 145 | 19 | 148 | 3.45e-22 | 88.6 |
| Msa0748480 | MtrunA17_Chr4g0068171 | 34.503 | 171 | 100 | 2 | 16 | 174 | 19 | 189 | 6.81e-22 | 87.8 |
| Msa0748480 | MtrunA17_Chr5g0395651 | 54.795 | 73 | 33 | 0 | 1 | 73 | 1 | 73 | 1.10e-21 | 84.0 |
| Msa0748480 | MtrunA17_Chr1g0189361 | 33.058 | 121 | 75 | 3 | 18 | 133 | 15 | 134 | 7.92e-11 | 58.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0748480 | AT3G22950.1 | 89.503 | 181 | 19 | 0 | 1 | 181 | 1 | 181 | 1.08e-121 | 341 |
| Msa0748480 | AT3G22950.2 | 89.503 | 181 | 19 | 0 | 1 | 181 | 1 | 181 | 1.08e-121 | 341 |
| Msa0748480 | AT1G23490.1 | 52.486 | 181 | 86 | 0 | 1 | 181 | 1 | 181 | 3.73e-68 | 206 |
| Msa0748480 | AT1G70490.2 | 52.486 | 181 | 86 | 0 | 1 | 181 | 1 | 181 | 3.73e-68 | 206 |
| Msa0748480 | AT1G70490.7 | 52.486 | 181 | 86 | 0 | 1 | 181 | 1 | 181 | 3.73e-68 | 206 |
| Msa0748480 | AT1G70490.4 | 52.486 | 181 | 86 | 0 | 1 | 181 | 1 | 181 | 3.73e-68 | 206 |
| Msa0748480 | AT1G70490.3 | 52.486 | 181 | 86 | 0 | 1 | 181 | 1 | 181 | 3.73e-68 | 206 |
| Msa0748480 | AT1G70490.1 | 52.486 | 181 | 86 | 0 | 1 | 181 | 1 | 181 | 3.73e-68 | 206 |
| Msa0748480 | AT1G70490.6 | 52.486 | 181 | 86 | 0 | 1 | 181 | 1 | 181 | 3.73e-68 | 206 |
| Msa0748480 | AT1G70490.5 | 52.486 | 181 | 86 | 0 | 1 | 181 | 1 | 181 | 3.73e-68 | 206 |
| Msa0748480 | AT1G10630.1 | 51.934 | 181 | 87 | 0 | 1 | 181 | 1 | 181 | 2.70e-67 | 203 |
| Msa0748480 | AT1G10630.2 | 51.934 | 181 | 87 | 0 | 1 | 181 | 1 | 181 | 2.70e-67 | 203 |
| Msa0748480 | AT5G14670.2 | 51.934 | 181 | 87 | 0 | 1 | 181 | 1 | 181 | 4.71e-67 | 203 |
| Msa0748480 | AT5G14670.3 | 51.934 | 181 | 87 | 0 | 1 | 181 | 1 | 181 | 4.71e-67 | 203 |
| Msa0748480 | AT3G62290.3 | 51.934 | 181 | 87 | 0 | 1 | 181 | 1 | 181 | 4.82e-67 | 203 |
| Msa0748480 | AT3G62290.1 | 51.934 | 181 | 87 | 0 | 1 | 181 | 1 | 181 | 4.82e-67 | 203 |
| Msa0748480 | AT3G62290.2 | 51.934 | 181 | 87 | 0 | 1 | 181 | 1 | 181 | 4.82e-67 | 203 |
| Msa0748480 | AT2G47170.2 | 51.934 | 181 | 87 | 0 | 1 | 181 | 1 | 181 | 5.31e-67 | 202 |
| Msa0748480 | AT2G47170.1 | 51.934 | 181 | 87 | 0 | 1 | 181 | 1 | 181 | 5.31e-67 | 202 |
| Msa0748480 | AT2G47170.3 | 51.934 | 181 | 87 | 0 | 1 | 181 | 1 | 181 | 5.31e-67 | 202 |
| Msa0748480 | AT5G14670.1 | 51.381 | 181 | 88 | 0 | 1 | 181 | 1 | 181 | 2.08e-66 | 201 |
| Msa0748480 | AT2G24765.1 | 49.425 | 174 | 88 | 0 | 1 | 174 | 1 | 174 | 2.05e-60 | 186 |
| Msa0748480 | AT5G17060.2 | 48.851 | 174 | 89 | 0 | 1 | 174 | 1 | 174 | 5.41e-60 | 185 |
| Msa0748480 | AT5G17060.1 | 48.851 | 174 | 89 | 0 | 1 | 174 | 1 | 174 | 5.41e-60 | 185 |
| Msa0748480 | AT2G15310.1 | 48.066 | 181 | 94 | 0 | 1 | 181 | 1 | 181 | 1.46e-59 | 184 |
| Msa0748480 | AT3G03120.1 | 49.425 | 174 | 88 | 0 | 1 | 174 | 1 | 174 | 2.07e-59 | 184 |
| Msa0748480 | AT2G24765.2 | 52.344 | 128 | 61 | 0 | 1 | 128 | 1 | 128 | 1.49e-44 | 144 |
| Msa0748480 | AT3G03120.2 | 50.000 | 130 | 65 | 0 | 1 | 130 | 1 | 130 | 2.58e-40 | 133 |
| Msa0748480 | AT2G18390.1 | 39.877 | 163 | 97 | 1 | 19 | 180 | 18 | 180 | 3.95e-40 | 134 |
| Msa0748480 | AT5G52210.1 | 34.615 | 182 | 112 | 1 | 1 | 175 | 1 | 182 | 2.06e-34 | 120 |
| Msa0748480 | AT5G52210.2 | 34.615 | 182 | 112 | 1 | 1 | 175 | 1 | 182 | 2.06e-34 | 120 |
| Msa0748480 | AT1G02430.1 | 36.216 | 185 | 104 | 5 | 1 | 173 | 1 | 183 | 4.42e-34 | 119 |
| Msa0748480 | AT1G02440.1 | 34.054 | 185 | 108 | 5 | 1 | 173 | 1 | 183 | 3.67e-31 | 112 |
| Msa0748480 | AT5G37680.1 | 36.620 | 142 | 89 | 1 | 12 | 152 | 14 | 155 | 5.12e-27 | 101 |
| Msa0748480 | AT1G02430.2 | 34.568 | 162 | 96 | 4 | 1 | 154 | 1 | 160 | 3.86e-26 | 98.2 |
| Msa0748480 | AT3G49870.1 | 35.811 | 148 | 82 | 2 | 12 | 152 | 14 | 155 | 2.64e-24 | 94.4 |
| Msa0748480 | AT5G67560.1 | 35.135 | 148 | 83 | 2 | 12 | 152 | 14 | 155 | 1.34e-23 | 92.4 |
| Msa0748480 | AT3G49860.1 | 34.043 | 141 | 92 | 1 | 13 | 152 | 7 | 147 | 1.52e-23 | 92.0 |
| Msa0748480 | AT3G62560.1 | 33.918 | 171 | 101 | 1 | 16 | 174 | 19 | 189 | 1.04e-22 | 90.1 |
| Msa0748480 | AT3G49870.2 | 35.461 | 141 | 78 | 2 | 19 | 152 | 2 | 136 | 1.89e-22 | 89.0 |
| Msa0748480 | AT5G37680.2 | 34.646 | 127 | 80 | 1 | 47 | 170 | 3 | 129 | 2.56e-22 | 87.8 |
| Msa0748480 | AT4G02080.1 | 33.333 | 171 | 102 | 1 | 16 | 174 | 19 | 189 | 4.56e-22 | 88.6 |
| Msa0748480 | AT1G56330.1 | 40.000 | 130 | 78 | 0 | 16 | 145 | 19 | 148 | 2.42e-21 | 86.7 |
| Msa0748480 | AT1G09180.1 | 40.000 | 130 | 78 | 0 | 16 | 145 | 19 | 148 | 5.56e-20 | 83.2 |
| Msa0748480 | AT1G02440.2 | 27.742 | 155 | 76 | 4 | 1 | 154 | 1 | 120 | 1.27e-14 | 67.4 |
Find 77 sgRNAs with CRISPR-Local
Find 478 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAATTAGTTATTAATTAATT+TGG | 0.073843 | 5_2:-1739719 | Msa0748480:five_prime_UTR |
| GATAGTTGTAGTTGATTAAA+AGG | 0.099548 | 5_2:-1739690 | Msa0748480:five_prime_UTR |
| CCGATTTGATTTGGCGATTT+GGG | 0.232061 | 5_2:+1739939 | None:intergenic |
| GGCTTCTTTCTATAACAATT+TGG | 0.253823 | 5_2:+1734083 | None:intergenic |
| ACCGATTTGATTTGGCGATT+TGG | 0.267331 | 5_2:+1739938 | None:intergenic |
| TCATTTCAGGTCTGGGATCT+TGG | 0.315908 | 5_2:-1734621 | Msa0748480:intron |
| GGATGCAGCAAACAGATAAA+AGG | 0.329957 | 5_2:+1734033 | None:intergenic |
| GAATGAACACCGATTTGATT+TGG | 0.333185 | 5_2:+1739930 | None:intergenic |
| GCTGGGTTTCCTTGCCTTGT+TGG | 0.337792 | 5_2:-1733985 | Msa0748480:three_prime_UTR |
| AATTAGTTATTAATTAATTT+GGG | 0.343296 | 5_2:-1739718 | Msa0748480:five_prime_UTR |
| GATGGTCTTGGATGGATTGC+CGG | 0.370902 | 5_2:-1734303 | Msa0748480:CDS |
| GAGTATAAGATTGTTGTTGT+TGG | 0.394215 | 5_2:-1739615 | Msa0748480:CDS |
| ACTCTTTATAAATTGCATCT+TGG | 0.394363 | 5_2:-1739567 | Msa0748480:CDS |
| GGCTTTATATGATAGCGAAT+TGG | 0.402139 | 5_2:-1733964 | Msa0748480:three_prime_UTR |
| AATTAGCCTATCTGTATGGC+TGG | 0.404702 | 5_2:-1734003 | Msa0748480:three_prime_UTR |
| TGGATTGCCGGGCGAGTAAC+CGG | 0.406341 | 5_2:-1734291 | Msa0748480:CDS |
| TGCTTTGCCGGTTACTCGCC+CGG | 0.406522 | 5_2:+1734284 | None:intergenic |
| GTTGCGATTGCGAAGAGAAT+TGG | 0.416440 | 5_2:+1739908 | None:intergenic |
| ACAATCTTATACTCTTTAGC+AGG | 0.426577 | 5_2:+1739624 | None:intergenic |
| GACGGCCTTTATGATGGTCT+TGG | 0.432233 | 5_2:-1734315 | Msa0748480:CDS |
| CAAGCTTGCAGCGCCCTCTC+AGG | 0.432795 | 5_2:-1734339 | Msa0748480:CDS |
| AAACCCACATCATGCTTTGC+CGG | 0.443216 | 5_2:+1734272 | None:intergenic |
| GGGCAATGATGTCTAGATTC+TGG | 0.443324 | 5_2:-1739659 | Msa0748480:CDS |
| TAAGATTGTTGTTGTTGGAT+TGG | 0.448953 | 5_2:-1739610 | Msa0748480:CDS |
| ATCCTTCATTAAAGAGATCC+TGG | 0.463726 | 5_2:+1734512 | None:intergenic |
| ATAGTTGTAGTTGATTAAAA+GGG | 0.463809 | 5_2:-1739689 | Msa0748480:five_prime_UTR |
| TCCATCCAAGACCATCATAA+AGG | 0.464813 | 5_2:+1734310 | None:intergenic |
| AAAGCATGATGTGGGTTTGC+TGG | 0.470420 | 5_2:-1734267 | Msa0748480:exon |
| CATCAATTAGCCTATCTGTA+TGG | 0.484638 | 5_2:-1734007 | Msa0748480:three_prime_UTR |
| TGCTAATAAACAAGATATCA+AGG | 0.484675 | 5_2:-1734433 | Msa0748480:CDS |
| GGAAACCCAGCCATACAGAT+AGG | 0.484935 | 5_2:+1733997 | None:intergenic |
| CCCAAATCGCCAAATCAAAT+CGG | 0.492653 | 5_2:-1739939 | Msa0748480:five_prime_UTR |
| GCCTTTATGATGGTCTTGGA+TGG | 0.493098 | 5_2:-1734311 | Msa0748480:CDS |
| TAGTTGATTAAAAGGGAGGA+TGG | 0.496304 | 5_2:-1739682 | Msa0748480:exon |
| AATATGTTGCCCATGATGTC+CGG | 0.496677 | 5_2:+1734583 | None:intergenic |
| AAGAAAGACTCCGGACATCA+TGG | 0.503977 | 5_2:-1734593 | Msa0748480:CDS |
| GTTGATTAAAAGGGAGGATG+GGG | 0.505474 | 5_2:-1739680 | Msa0748480:exon |
| ACAGCATCAAGGATCATGAT+TGG | 0.511844 | 5_2:-1734368 | Msa0748480:CDS |
| TTTCAGGTCTGGGATCTTGG+CGG | 0.512294 | 5_2:-1734618 | Msa0748480:intron |
| ATGGTCTTGGATGGATTGCC+GGG | 0.515323 | 5_2:-1734302 | Msa0748480:CDS |
| AATTCATACACACACTAGCC+TGG | 0.526989 | 5_2:+1734156 | None:intergenic |
| AGAGCATCAGTGATTTCAGC+AGG | 0.529085 | 5_2:+1734399 | None:intergenic |
| TCAGGAGACGGCCTTTATGA+TGG | 0.533539 | 5_2:-1734321 | Msa0748480:CDS |
| CACAGACAACGCTACCTCCC+AGG | 0.538657 | 5_2:-1739886 | Msa0748480:intron |
| TGCAGCGCCCTCTCAGGAGA+CGG | 0.539815 | 5_2:-1734333 | Msa0748480:CDS |
| TTATAAATTGCATCTTGGTG+AGG | 0.541529 | 5_2:-1739562 | Msa0748480:CDS |
| AGCCAGGATCTCTTTAATGA+AGG | 0.547926 | 5_2:-1734514 | Msa0748480:CDS |
| GTTGTAGTTGATTAAAAGGG+AGG | 0.548123 | 5_2:-1739686 | Msa0748480:five_prime_UTR |
| TCGACGTTGCTACCAACAGT+AGG | 0.548630 | 5_2:+1739525 | None:intergenic |
| TGTGGGTTTGCTGGAAACTA+AGG | 0.552981 | 5_2:-1734258 | Msa0748480:three_prime_UTR |
| AGTTGATTAAAAGGGAGGAT+GGG | 0.553148 | 5_2:-1739681 | Msa0748480:exon |
| TCGACAGCAGTGATAGAGCC+AGG | 0.557461 | 5_2:-1734530 | Msa0748480:CDS |
| CATAAAGGCCGTCTCCTGAG+AGG | 0.561891 | 5_2:+1734325 | None:intergenic |
| ATTAGCCTATCTGTATGGCT+GGG | 0.562189 | 5_2:-1734002 | Msa0748480:three_prime_UTR |
| CATATAAAGCCAACAAGGCA+AGG | 0.562323 | 5_2:+1733976 | None:intergenic |
| CTTGTTTATTAGCAAAGACA+AGG | 0.566607 | 5_2:+1734442 | None:intergenic |
| ATATTTCAAAGAATCAAGCC+AGG | 0.572391 | 5_2:-1734174 | Msa0748480:three_prime_UTR |
| CAATTACAGCATGAGTTCCT+CGG | 0.575990 | 5_2:+1734559 | None:intergenic |
| CCTCTGCATTGCATGCACCT+TGG | 0.577104 | 5_2:-1734062 | Msa0748480:three_prime_UTR |
| TCTGTCACTTCACAGCATCA+AGG | 0.579384 | 5_2:-1734379 | Msa0748480:CDS |
| AAGATGCAATTTATAAAGAG+TGG | 0.580200 | 5_2:+1739569 | None:intergenic |
| TTGATTAAAAGGGAGGATGG+GGG | 0.584384 | 5_2:-1739679 | Msa0748480:exon |
| AGAAAGACTCCGGACATCAT+GGG | 0.590125 | 5_2:-1734592 | Msa0748480:CDS |
| ATAAAGGCCGTCTCCTGAGA+GGG | 0.592089 | 5_2:+1734326 | None:intergenic |
| CGACGTTGCTACCAACAGTA+GGG | 0.595721 | 5_2:+1739526 | None:intergenic |
| GTTACTACTAACCCTACTGT+TGG | 0.624128 | 5_2:-1739537 | Msa0748480:CDS |
| CAGATAGGCTAATTGATGAG+AGG | 0.628286 | 5_2:+1734012 | None:intergenic |
| TTGGCGGACAAGAAAGACTC+CGG | 0.636413 | 5_2:-1734602 | Msa0748480:CDS |
| CAGATAAAAGGAAGTGACCA+AGG | 0.637812 | 5_2:+1734045 | None:intergenic |
| TAACCGGCAAAGCATGATGT+GGG | 0.639528 | 5_2:-1734275 | Msa0748480:exon |
| CAATCTTATACTCTTTAGCA+GGG | 0.643634 | 5_2:+1739625 | None:intergenic |
| GTAACCGGCAAAGCATGATG+TGG | 0.646220 | 5_2:-1734276 | Msa0748480:exon |
| CCAAGGTGCATGCAATGCAG+AGG | 0.647435 | 5_2:+1734062 | None:intergenic |
| GTTGTTGGATTGGATAACGC+TGG | 0.661294 | 5_2:-1739600 | Msa0748480:CDS |
| GCTATCATATAAAGCCAACA+AGG | 0.696600 | 5_2:+1733971 | None:intergenic |
| AGAAAAGGATCGAACCTGGG+AGG | 0.724445 | 5_2:+1739872 | None:intergenic |
| TCATGGGCAACATATTACCG+AGG | 0.738917 | 5_2:-1734576 | Msa0748480:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GTTTAATTTAATTGATATAA+TGG | + | chr5_2:1736567-1736586 | None:intergenic | 10.0% |
| !! | ACATAATCAAATGAATTAAT+CGG | + | chr5_2:1734197-1734216 | None:intergenic | 15.0% |
| !! | ACATAAGTTAAAAGAAAAAT+TGG | - | chr5_2:1734694-1734713 | Msa0748480:intron | 15.0% |
| !! | GAATATACAAGATAATTATA+AGG | - | chr5_2:1734716-1734735 | Msa0748480:intron | 15.0% |
| !! | TAAGAAAATAGAAGATTAAA+TGG | - | chr5_2:1735731-1735750 | Msa0748480:intron | 15.0% |
| !! | AAGAAAATAGAAGATTAAAT+GGG | - | chr5_2:1735732-1735751 | Msa0748480:intron | 15.0% |
| !! | AAATTGTACTTAGAATTTAT+AGG | + | chr5_2:1735842-1735861 | None:intergenic | 15.0% |
| !! | ATATTCATATTTACTTCAAT+AGG | - | chr5_2:1736777-1736796 | Msa0748480:intron | 15.0% |
| !! | AATTTACTATAGTAGTAAAA+TGG | + | chr5_2:1737650-1737669 | None:intergenic | 15.0% |
| !!! | ATTTTATTAGGAAAAAATGT+GGG | + | chr5_2:1737886-1737905 | None:intergenic | 15.0% |
| !!! | AATTTTATTAGGAAAAAATG+TGG | + | chr5_2:1737887-1737906 | None:intergenic | 15.0% |
| !!! | AAAATTTAGGTTGAAAAAAA+TGG | + | chr5_2:1738905-1738924 | None:intergenic | 15.0% |
| !! | ATAGTTGTAGTTGATTAAAA+GGG | - | chr5_2:1734269-1734288 | Msa0748480:exon | 20.0% |
| !! | AAAGATTGTTCCTTTATATT+TGG | - | chr5_2:1734757-1734776 | Msa0748480:intron | 20.0% |
| !! | TATAGGATAAATAGTGTTAT+AGG | - | chr5_2:1734817-1734836 | Msa0748480:intron | 20.0% |
| !! | TTACACATTAACATGAATTT+GGG | - | chr5_2:1735511-1735530 | Msa0748480:intron | 20.0% |
| !!! | TGATGGATATACATATAATA+CGG | + | chr5_2:1735807-1735826 | None:intergenic | 20.0% |
| !! | ACATCTTATGTAAATTCTAA+TGG | + | chr5_2:1736093-1736112 | None:intergenic | 20.0% |
| !! | ATACTATATTTATTCCAACA+TGG | + | chr5_2:1736192-1736211 | None:intergenic | 20.0% |
| !! | AAAATCATAAAAACAAACTC+TGG | - | chr5_2:1736296-1736315 | Msa0748480:intron | 20.0% |
| !! | TTACTACATTTGAACTTATT+TGG | + | chr5_2:1737009-1737028 | None:intergenic | 20.0% |
| !! | TATGTCATGATATTAGTATT+AGG | - | chr5_2:1737384-1737403 | Msa0748480:intron | 20.0% |
| !! | AGTTATTCATGATCATAATA+TGG | - | chr5_2:1737552-1737571 | Msa0748480:intron | 20.0% |
| !!! | ATTTTAATTATTTTTCCCCT+TGG | + | chr5_2:1737852-1737871 | None:intergenic | 20.0% |
| !! | TTAATTTATTTGTTCAACCT+GGG | + | chr5_2:1738079-1738098 | None:intergenic | 20.0% |
| !! | ATGATTCAACTCAATTAATT+GGG | + | chr5_2:1738189-1738208 | None:intergenic | 20.0% |
| !! | AATGATTCAACTCAATTAAT+TGG | + | chr5_2:1738190-1738209 | None:intergenic | 20.0% |
| !!! | GAAATTAATGCTTTGAAAAT+CGG | + | chr5_2:1738599-1738618 | None:intergenic | 20.0% |
| !!! | GTACCATTTAAATTTTCTTA+GGG | - | chr5_2:1738726-1738745 | Msa0748480:intron | 20.0% |
| !!! | ATGTGTTTTTAAACTACATT+TGG | - | chr5_2:1739251-1739270 | Msa0748480:intron | 20.0% |
| !! | TAGATAGTTCTTCTTTTCTT+CGG | - | chr5_2:1733972-1733991 | Msa0748480:three_prime_UTR | 25.0% |
| ! | GATAGTTGTAGTTGATTAAA+AGG | - | chr5_2:1734268-1734287 | Msa0748480:exon | 25.0% |
| ! | AAGATGCAATTTATAAAGAG+TGG | + | chr5_2:1734392-1734411 | None:intergenic | 25.0% |
| ! | ACTCTTTATAAATTGCATCT+TGG | - | chr5_2:1734391-1734410 | Msa0748480:CDS | 25.0% |
| ! | AAATGATGATAAACTGGTAA+GGG | + | chr5_2:1734497-1734516 | None:intergenic | 25.0% |
| ! | AAAATGATGATAAACTGGTA+AGG | + | chr5_2:1734498-1734517 | None:intergenic | 25.0% |
| ! | ATAGCAAAATGATGATAAAC+TGG | + | chr5_2:1734503-1734522 | None:intergenic | 25.0% |
| !! | TTGTTGATCAAAGTTTTCAT+TGG | - | chr5_2:1734583-1734602 | Msa0748480:CDS | 25.0% |
| ! | CAAATATTAGCGTTCATATT+TGG | - | chr5_2:1734639-1734658 | Msa0748480:intron | 25.0% |
| ! | TGACAAATATAATCACATTG+TGG | + | chr5_2:1735152-1735171 | None:intergenic | 25.0% |
| !! | TTTTTACCATTGAACTGTTT+TGG | - | chr5_2:1735199-1735218 | Msa0748480:intron | 25.0% |
| ! | AATTTGATTGCTAGAATAGT+TGG | - | chr5_2:1735277-1735296 | Msa0748480:intron | 25.0% |
| ! | AAAGAAAGACAACTTTAGAT+TGG | + | chr5_2:1735316-1735335 | None:intergenic | 25.0% |
| !!! | TCTAAAGTTGTCTTTCTTTT+TGG | - | chr5_2:1735317-1735336 | Msa0748480:intron | 25.0% |
| ! | ACCTTATTGATAGAAGTTAA+GGG | - | chr5_2:1735355-1735374 | Msa0748480:intron | 25.0% |
| ! | CACAAAATTAAAGATGTTGT+GGG | + | chr5_2:1735464-1735483 | None:intergenic | 25.0% |
| ! | CTTACACATTAACATGAATT+TGG | - | chr5_2:1735510-1735529 | Msa0748480:intron | 25.0% |
| ! | AGTAGCGTAATAGATTAATT+GGG | + | chr5_2:1735926-1735945 | None:intergenic | 25.0% |
| ! | AAGTAGCGTAATAGATTAAT+TGG | + | chr5_2:1735927-1735946 | None:intergenic | 25.0% |
| ! | AATTAATCTATTACGCTACT+TGG | - | chr5_2:1735926-1735945 | Msa0748480:intron | 25.0% |
| ! | TTTACATATTGCATCCAATA+TGG | + | chr5_2:1736332-1736351 | None:intergenic | 25.0% |
| !!! | GCTTTTTTCTTAAATAGAGA+AGG | + | chr5_2:1736885-1736904 | None:intergenic | 25.0% |
| ! | TGCATATTTAAATGCAGATT+GGG | + | chr5_2:1737133-1737152 | None:intergenic | 25.0% |
| ! | TTGCATATTTAAATGCAGAT+TGG | + | chr5_2:1737134-1737153 | None:intergenic | 25.0% |
| ! | TACTAATATCATGACATATC+AGG | + | chr5_2:1737382-1737401 | None:intergenic | 25.0% |
| !!! | AAATATGCTTGATATTTTGG+AGG | + | chr5_2:1737453-1737472 | None:intergenic | 25.0% |
| !! | AAAGATCAGAATTGTTACTT+CGG | + | chr5_2:1737481-1737500 | None:intergenic | 25.0% |
| ! | ATTAGCAATATTCAGATTCT+AGG | - | chr5_2:1737667-1737686 | Msa0748480:intron | 25.0% |
| ! | CTTAATTTATTTGTTCAACC+TGG | + | chr5_2:1738080-1738099 | None:intergenic | 25.0% |
| !! | ATCACTGTTAAATTTTGCTA+CGG | - | chr5_2:1738105-1738124 | Msa0748480:intron | 25.0% |
| ! | TACTGAAGAAATTAAGATCA+AGG | - | chr5_2:1738157-1738176 | Msa0748480:intron | 25.0% |
| ! | TGATTCAACTCAATTAATTG+GGG | + | chr5_2:1738188-1738207 | None:intergenic | 25.0% |
| ! | TTAAAGTGAGTAGAATTTGT+TGG | - | chr5_2:1738278-1738297 | Msa0748480:intron | 25.0% |
| !! | TCATGATTTAATTGGTTCAA+CGG | + | chr5_2:1738546-1738565 | None:intergenic | 25.0% |
| ! | TTTCTGGATCATGATTTAAT+TGG | + | chr5_2:1738554-1738573 | None:intergenic | 25.0% |
| !! | GGTACCATTTAAATTTTCTT+AGG | - | chr5_2:1738725-1738744 | Msa0748480:intron | 25.0% |
| ! | TAGCCCTAAGAAAATTTAAA+TGG | + | chr5_2:1738732-1738751 | None:intergenic | 25.0% |
| !!! | GTGCTGATTAGAAAAAATTT+AGG | + | chr5_2:1738918-1738937 | None:intergenic | 25.0% |
| ! | ACTGAGTACTAAATTAGAAA+AGG | + | chr5_2:1739200-1739219 | None:intergenic | 25.0% |
| ! | TTTAAAAACACATGCATACA+TGG | + | chr5_2:1739244-1739263 | None:intergenic | 25.0% |
| ! | TGCTAATAAACAAGATATCA+AGG | - | chr5_2:1739525-1739544 | Msa0748480:CDS | 25.0% |
| ATTATGTGATTATTCGCTTC+AGG | - | chr5_2:1734210-1734229 | Msa0748480:three_prime_UTR | 30.0% | |
| CAATCTTATACTCTTTAGCA+GGG | + | chr5_2:1734336-1734355 | None:intergenic | 30.0% | |
| ACAATCTTATACTCTTTAGC+AGG | + | chr5_2:1734337-1734356 | None:intergenic | 30.0% | |
| ! | GAGTATAAGATTGTTGTTGT+TGG | - | chr5_2:1734343-1734362 | Msa0748480:CDS | 30.0% |
| ! | TAAGATTGTTGTTGTTGGAT+TGG | - | chr5_2:1734348-1734367 | Msa0748480:CDS | 30.0% |
| TTATAAATTGCATCTTGGTG+AGG | - | chr5_2:1734396-1734415 | Msa0748480:CDS | 30.0% | |
| TCCTTTATATTTGGTTGTTG+TGG | - | chr5_2:1734766-1734785 | Msa0748480:intron | 30.0% | |
| ACCACAACAACCAAATATAA+AGG | + | chr5_2:1734770-1734789 | None:intergenic | 30.0% | |
| AGGATAAATAGTGTTATAGG+CGG | - | chr5_2:1734820-1734839 | Msa0748480:intron | 30.0% | |
| !!! | TTGGTTTTACTTTGTTGTCA+GGG | - | chr5_2:1734904-1734923 | Msa0748480:intron | 30.0% |
| AACTTTGTATAGAAGTTGTG+TGG | - | chr5_2:1735035-1735054 | Msa0748480:intron | 30.0% | |
| TAGATGTAAGTCCTTAAAGA+CGG | + | chr5_2:1735098-1735117 | None:intergenic | 30.0% | |
| TTTAAGGACTTACATCTAGA+GGG | - | chr5_2:1735100-1735119 | Msa0748480:intron | 30.0% | |
| !! | GACACTTTCTTTTTGAAGAA+CGG | + | chr5_2:1735130-1735149 | None:intergenic | 30.0% |
| ! | TATCAATAAGGTGTTCTCAA+TGG | + | chr5_2:1735347-1735366 | None:intergenic | 30.0% |
| CACCTTATTGATAGAAGTTA+AGG | - | chr5_2:1735354-1735373 | Msa0748480:intron | 30.0% | |
| CCTTATTGATAGAAGTTAAG+GGG | - | chr5_2:1735356-1735375 | Msa0748480:intron | 30.0% | |
| AAATGCACATCTCCATATTA+GGG | + | chr5_2:1735412-1735431 | None:intergenic | 30.0% | |
| AAAATGCACATCTCCATATT+AGG | + | chr5_2:1735413-1735432 | None:intergenic | 30.0% | |
| ! | TAATATGGAGATGTGCATTT+TGG | - | chr5_2:1735412-1735431 | Msa0748480:intron | 30.0% |
| CCACAAAATTAAAGATGTTG+TGG | + | chr5_2:1735465-1735484 | None:intergenic | 30.0% | |
| !! | CCACAACATCTTTAATTTTG+TGG | - | chr5_2:1735462-1735481 | Msa0748480:intron | 30.0% |
| TTTATTCCAACATGGACATA+CGG | + | chr5_2:1736184-1736203 | None:intergenic | 30.0% | |
| TATTGATCTGAACCAAAAAC+AGG | - | chr5_2:1736209-1736228 | Msa0748480:intron | 30.0% | |
| ATTGATCTGAACCAAAAACA+GGG | - | chr5_2:1736210-1736229 | Msa0748480:intron | 30.0% | |
| AGACTAAGAGAAAGTAAAGA+GGG | + | chr5_2:1736254-1736273 | None:intergenic | 30.0% | |
| AAGACTAAGAGAAAGTAAAG+AGG | + | chr5_2:1736255-1736274 | None:intergenic | 30.0% | |
| ! | TTTTATGATTTTTCCTCGCA+AGG | + | chr5_2:1736288-1736307 | None:intergenic | 30.0% |
| GGATGCAATATGTAAATGTA+AGG | - | chr5_2:1736336-1736355 | Msa0748480:intron | 30.0% | |
| ATATGTAAATGTAAGGCTAC+TGG | - | chr5_2:1736343-1736362 | Msa0748480:intron | 30.0% | |
| TTAAAAAAATTTGGCAGGCT+AGG | + | chr5_2:1736423-1736442 | None:intergenic | 30.0% | |
| !!! | TAGCCTGCCAAATTTTTTTA+AGG | - | chr5_2:1736422-1736441 | Msa0748480:intron | 30.0% |
| GCTTAGGCCTTAAAAAAATT+TGG | + | chr5_2:1736432-1736451 | None:intergenic | 30.0% | |
| TCATATTTACTTCAATAGGC+CGG | - | chr5_2:1736781-1736800 | Msa0748480:intron | 30.0% | |
| ! | AGAAGCCTATTTAGCTTAAA+AGG | + | chr5_2:1736849-1736868 | None:intergenic | 30.0% |
| CTCTATTTAAGAAAAAAGCC+TGG | - | chr5_2:1736886-1736905 | Msa0748480:intron | 30.0% | |
| GAGAGAGAATCTAATTTCAT+GGG | + | chr5_2:1737084-1737103 | None:intergenic | 30.0% | |
| ATTCTCTTTGTGATAGTCAT+TGG | + | chr5_2:1737243-1737262 | None:intergenic | 30.0% | |
| CACAAAGAGAATTGAGTATT+TGG | - | chr5_2:1737251-1737270 | Msa0748480:intron | 30.0% | |
| AATATCATGACATATCAGGA+GGG | + | chr5_2:1737378-1737397 | None:intergenic | 30.0% | |
| TAATATCATGACATATCAGG+AGG | + | chr5_2:1737379-1737398 | None:intergenic | 30.0% | |
| ! | GGGAAATATGCTTGATATTT+TGG | + | chr5_2:1737456-1737475 | None:intergenic | 30.0% |
| TGGCAATCTAATATGATTCA+GGG | + | chr5_2:1737630-1737649 | None:intergenic | 30.0% | |
| ATGGCAATCTAATATGATTC+AGG | + | chr5_2:1737631-1737650 | None:intergenic | 30.0% | |
| AACATTGGTAAAAATTGTCC+AGG | + | chr5_2:1737709-1737728 | None:intergenic | 30.0% | |
| TTTCTAACTAGCTGTTTAGA+TGG | + | chr5_2:1737790-1737809 | None:intergenic | 30.0% | |
| ! | CAGTCTGACGAAATTTTATT+AGG | + | chr5_2:1737898-1737917 | None:intergenic | 30.0% |
| GATTCAACTCAATTAATTGG+GGG | + | chr5_2:1738187-1738206 | None:intergenic | 30.0% | |
| ! | GTTGAATCATTGATAGTTGA+AGG | - | chr5_2:1738199-1738218 | Msa0748480:intron | 30.0% |
| CTTTAAATCACAGCTAAAAC+AGG | + | chr5_2:1738264-1738283 | None:intergenic | 30.0% | |
| !!! | TTAGGGGATATTTTGTTTTG+TGG | - | chr5_2:1738340-1738359 | Msa0748480:intron | 30.0% |
| AAAATGACCACCAAATGTTT+GGG | + | chr5_2:1738431-1738450 | None:intergenic | 30.0% | |
| AAAAATGACCACCAAATGTT+TGG | + | chr5_2:1738432-1738451 | None:intergenic | 30.0% | |
| !!! | ATTTGGTGGTCATTTTTTAG+TGG | - | chr5_2:1738435-1738454 | Msa0748480:intron | 30.0% |
| !!! | TTTGGTGGTCATTTTTTAGT+GGG | - | chr5_2:1738436-1738455 | Msa0748480:intron | 30.0% |
| !!! | TTCATTGCATTTTTTCAGCT+TGG | + | chr5_2:1738463-1738482 | None:intergenic | 30.0% |
| TGCTTATTGGAATACATTGT+TGG | - | chr5_2:1739101-1739120 | Msa0748480:intron | 30.0% | |
| GCTTATTGGAATACATTGTT+GGG | - | chr5_2:1739102-1739121 | Msa0748480:intron | 30.0% | |
| TAGAAAAGGATAATGCTTAC+TGG | + | chr5_2:1739186-1739205 | None:intergenic | 30.0% | |
| ! | TTTTTAAACTACATTTGGCG+CGG | - | chr5_2:1739256-1739275 | Msa0748480:intron | 30.0% |
| TTGTGCAAAATAGTAAAGCT+AGG | + | chr5_2:1739289-1739308 | None:intergenic | 30.0% | |
| TCGAATTTGTCATTCATTTC+AGG | - | chr5_2:1739324-1739343 | Msa0748480:intron | 30.0% | |
| ! | TAATGAAGGATGAACTTTTC+AGG | - | chr5_2:1739458-1739477 | Msa0748480:intron | 30.0% |
| CTTGTTTATTAGCAAAGACA+AGG | + | chr5_2:1739519-1739538 | None:intergenic | 30.0% | |
| ATATTTCAAAGAATCAAGCC+AGG | - | chr5_2:1739784-1739803 | Msa0748480:intron | 30.0% | |
| GGCTTCTTTCTATAACAATT+TGG | + | chr5_2:1739878-1739897 | None:intergenic | 30.0% | |
| !! | GAATGAACACCGATTTGATT+TGG | + | chr5_2:1734031-1734050 | None:intergenic | 35.0% |
| CAGATCGATAGAGAAAGAAA+AGG | + | chr5_2:1734104-1734123 | None:intergenic | 35.0% | |
| ! | GAATAAAGCGTTTATTGCGT+TGG | + | chr5_2:1734143-1734162 | None:intergenic | 35.0% |
| GTTGTAGTTGATTAAAAGGG+AGG | - | chr5_2:1734272-1734291 | Msa0748480:exon | 35.0% | |
| TAGTTGATTAAAAGGGAGGA+TGG | - | chr5_2:1734276-1734295 | Msa0748480:exon | 35.0% | |
| AGTTGATTAAAAGGGAGGAT+GGG | - | chr5_2:1734277-1734296 | Msa0748480:exon | 35.0% | |
| ! | CTACAAAAACATTCGATTCG+AGG | - | chr5_2:1734465-1734484 | Msa0748480:CDS | 35.0% |
| GAACGCTAATATTTGCTTGA+GGG | + | chr5_2:1734634-1734653 | None:intergenic | 35.0% | |
| TGAACGCTAATATTTGCTTG+AGG | + | chr5_2:1734635-1734654 | None:intergenic | 35.0% | |
| !! | TTGTGGTTTGTTAACCATCA+GGG | - | chr5_2:1734783-1734802 | Msa0748480:intron | 35.0% |
| ACACTTGAGTGTAAGATCTA+TGG | - | chr5_2:1734877-1734896 | Msa0748480:intron | 35.0% | |
| ! | GTGTAAGATCTATGGTTTGT+TGG | - | chr5_2:1734885-1734904 | Msa0748480:intron | 35.0% |
| !!! | GTTGGTTTTACTTTGTTGTC+AGG | - | chr5_2:1734903-1734922 | Msa0748480:intron | 35.0% |
| ATGATTAGAATCATGAGCAG+TGG | - | chr5_2:1734954-1734973 | Msa0748480:intron | 35.0% | |
| ACTATAGCAGCAATGAAGAT+TGG | + | chr5_2:1735061-1735080 | None:intergenic | 35.0% | |
| ! | CTTTAAGGACTTACATCTAG+AGG | - | chr5_2:1735099-1735118 | Msa0748480:intron | 35.0% |
| CCCCTTAACTTCTATCAATA+AGG | + | chr5_2:1735359-1735378 | None:intergenic | 35.0% | |
| ! | ATTTTGTGGAGTTTAAGTCG+TGG | - | chr5_2:1735476-1735495 | Msa0748480:intron | 35.0% |
| CCTCAAGAAAATATTCTCCA+AGG | + | chr5_2:1735550-1735569 | None:intergenic | 35.0% | |
| ! | CCTTGGAGAATATTTTCTTG+AGG | - | chr5_2:1735547-1735566 | Msa0748480:intron | 35.0% |
| ACCATCAATCCAAATGATGT+TGG | - | chr5_2:1735590-1735609 | Msa0748480:intron | 35.0% | |
| ACCAACATCATTTGGATTGA+TGG | + | chr5_2:1735594-1735613 | None:intergenic | 35.0% | |
| AGATTGCTACCAACATCATT+TGG | + | chr5_2:1735602-1735621 | None:intergenic | 35.0% | |
| !!! | GTCATACACTTGTTTTGTCT+TGG | + | chr5_2:1735653-1735672 | None:intergenic | 35.0% |
| AGTGGATCAGCAATAAAAGA+TGG | - | chr5_2:1735700-1735719 | Msa0748480:intron | 35.0% | |
| ATATAATACGGCAAGAGAGT+TGG | + | chr5_2:1735795-1735814 | None:intergenic | 35.0% | |
| !! | ATAGGCTTCTCTATTTCTGA+TGG | + | chr5_2:1735824-1735843 | None:intergenic | 35.0% |
| AGCGTAATAGATTAATTGGG+TGG | + | chr5_2:1735923-1735942 | None:intergenic | 35.0% | |
| GGTACAATATAAGATACCCT+CGG | - | chr5_2:1736032-1736051 | Msa0748480:intron | 35.0% | |
| GTACAATATAAGATACCCTC+GGG | - | chr5_2:1736033-1736052 | Msa0748480:intron | 35.0% | |
| ! | ATGTTTTCACCAAGTCTCTA+AGG | + | chr5_2:1736059-1736078 | None:intergenic | 35.0% |
| CCATGAGAAGATTGTTTATG+AGG | + | chr5_2:1736131-1736150 | None:intergenic | 35.0% | |
| CCTCATAAACAATCTTCTCA+TGG | - | chr5_2:1736128-1736147 | Msa0748480:intron | 35.0% | |
| AGGCCTTAAAAAAATTTGGC+AGG | + | chr5_2:1736428-1736447 | None:intergenic | 35.0% | |
| !!! | ATTTTTTTAAGGCCTAAGCC+TGG | - | chr5_2:1736433-1736452 | Msa0748480:intron | 35.0% |
| CTAAAAAGTAAGCCTATGAC+AGG | + | chr5_2:1736466-1736485 | None:intergenic | 35.0% | |
| !!! | CTGTCATAGGCTTACTTTTT+AGG | - | chr5_2:1736464-1736483 | Msa0748480:intron | 35.0% |
| GATCACATTGCTTATTTAGC+AGG | + | chr5_2:1736522-1736541 | None:intergenic | 35.0% | |
| ! | ATAGGCTTCTAAAAAAGCCT+AGG | - | chr5_2:1736859-1736878 | Msa0748480:intron | 35.0% |
| TTCTTAAATAGAGAAGGCCT+AGG | + | chr5_2:1736879-1736898 | None:intergenic | 35.0% | |
| !!! | AGTCTCTTTTGAGATGACTA+GGG | + | chr5_2:1736970-1736989 | None:intergenic | 35.0% |
| !!! | AAGTCTCTTTTGAGATGACT+AGG | + | chr5_2:1736971-1736990 | None:intergenic | 35.0% |
| TCATCTCAAAAGAGACTTGT+TGG | - | chr5_2:1736973-1736992 | Msa0748480:intron | 35.0% | |
| ATGTAGTAAGATCCATATCC+CGG | - | chr5_2:1737020-1737039 | Msa0748480:intron | 35.0% | |
| ATTGCTAGATCTAGTGAAAC+CGG | + | chr5_2:1737042-1737061 | None:intergenic | 35.0% | |
| GGAGAGAGAATCTAATTTCA+TGG | + | chr5_2:1737085-1737104 | None:intergenic | 35.0% | |
| !! | CTCGGCTATTATTAACTTGT+AGG | + | chr5_2:1737106-1737125 | None:intergenic | 35.0% |
| AATATGCAACATTATCAGCG+TGG | - | chr5_2:1737145-1737164 | Msa0748480:intron | 35.0% | |
| GTATATCAAAGGGTCTCAAA+GGG | + | chr5_2:1737197-1737216 | None:intergenic | 35.0% | |
| GAATCCTGAGGTATATCAAA+GGG | + | chr5_2:1737207-1737226 | None:intergenic | 35.0% | |
| TGAATCCTGAGGTATATCAA+AGG | + | chr5_2:1737208-1737227 | None:intergenic | 35.0% | |
| TCCACAACAATGATGACAAA+GGG | - | chr5_2:1737274-1737293 | Msa0748480:intron | 35.0% | |
| ATATCATGACATATCAGGAG+GGG | + | chr5_2:1737377-1737396 | None:intergenic | 35.0% | |
| !! | TAAGCTCATTGGTTCACATA+CGG | + | chr5_2:1737412-1737431 | None:intergenic | 35.0% |
| GATTTATGCTGTAAGCTCAT+TGG | + | chr5_2:1737423-1737442 | None:intergenic | 35.0% | |
| TGATCTTTGCTTGCGTAATT+TGG | - | chr5_2:1737493-1737512 | Msa0748480:intron | 35.0% | |
| GATCTTTGCTTGCGTAATTT+GGG | - | chr5_2:1737494-1737513 | Msa0748480:intron | 35.0% | |
| GTAATTTGGGTCTTTACACT+CGG | - | chr5_2:1737507-1737526 | Msa0748480:intron | 35.0% | |
| TATTTATACAGAGCTGAAGC+TGG | + | chr5_2:1737598-1737617 | None:intergenic | 35.0% | |
| CAGTTCGATCATGAAAACAT+TGG | + | chr5_2:1737724-1737743 | None:intergenic | 35.0% | |
| ! | CAATGTTTTCATGATCGAAC+TGG | - | chr5_2:1737722-1737741 | Msa0748480:intron | 35.0% |
| !! | AATTATTTTTCCCCTTGGAC+AGG | + | chr5_2:1737847-1737866 | None:intergenic | 35.0% |
| AAGAACCAAGATTTGTAGCA+TGG | + | chr5_2:1737997-1738016 | None:intergenic | 35.0% | |
| !! | AGTGAGTAGAATTTGTTGGA+TGG | - | chr5_2:1738282-1738301 | Msa0748480:intron | 35.0% |
| ATTGTTGTCGTAGTTAGGTT+AGG | - | chr5_2:1738306-1738325 | Msa0748480:intron | 35.0% | |
| TTGTTGTCGTAGTTAGGTTA+GGG | - | chr5_2:1738307-1738326 | Msa0748480:intron | 35.0% | |
| GATTTATGAGCCCAAACATT+TGG | - | chr5_2:1738418-1738437 | Msa0748480:intron | 35.0% | |
| !!! | TTGGTGGTCATTTTTTAGTG+GGG | - | chr5_2:1738437-1738456 | Msa0748480:intron | 35.0% |
| TACTTCTCTTGTAAGAAGCT+TGG | - | chr5_2:1738619-1738638 | Msa0748480:intron | 35.0% | |
| TGGTGAGTGGTAGTAAATAA+AGG | + | chr5_2:1738656-1738675 | None:intergenic | 35.0% | |
| ! | TGGGTGTTTCTAAATGAACA+TGG | - | chr5_2:1738703-1738722 | Msa0748480:intron | 35.0% |
| ! | GGGTGTTTCTAAATGAACAT+GGG | - | chr5_2:1738704-1738723 | Msa0748480:intron | 35.0% |
| ! | TTTGTCATTCATTTCAGGTC+TGG | - | chr5_2:1739329-1739348 | Msa0748480:intron | 35.0% |
| ! | TTGTCATTCATTTCAGGTCT+GGG | - | chr5_2:1739330-1739349 | Msa0748480:intron | 35.0% |
| ATCCTTCATTAAAGAGATCC+TGG | + | chr5_2:1739449-1739468 | None:intergenic | 35.0% | |
| ! | CATCAATTAGCCTATCTGTA+TGG | - | chr5_2:1739951-1739970 | Msa0748480:five_prime_UTR | 35.0% |
| GCTATCATATAAAGCCAACA+AGG | + | chr5_2:1739990-1740009 | None:intergenic | 35.0% | |
| ! | GGCTTTATATGATAGCGAAT+TGG | - | chr5_2:1739994-1740013 | Msa0748480:five_prime_UTR | 35.0% |
| !! | CCGATTTGATTTGGCGATTT+GGG | + | chr5_2:1734022-1734041 | None:intergenic | 40.0% |
| CCCAAATCGCCAAATCAAAT+CGG | - | chr5_2:1734019-1734038 | Msa0748480:three_prime_UTR | 40.0% | |
| !! | ACCGATTTGATTTGGCGATT+TGG | + | chr5_2:1734023-1734042 | None:intergenic | 40.0% |
| GAAAGAAAAGGATCGAACCT+GGG | + | chr5_2:1734092-1734111 | None:intergenic | 40.0% | |
| AGAAAGAAAAGGATCGAACC+TGG | + | chr5_2:1734093-1734112 | None:intergenic | 40.0% | |
| GTTGATTAAAAGGGAGGATG+GGG | - | chr5_2:1734278-1734297 | Msa0748480:exon | 40.0% | |
| TTGATTAAAAGGGAGGATGG+GGG | - | chr5_2:1734279-1734298 | Msa0748480:exon | 40.0% | |
| GTTACTACTAACCCTACTGT+TGG | - | chr5_2:1734421-1734440 | Msa0748480:CDS | 40.0% | |
| TGTTGATCTTGCTTGCTTCT+AGG | - | chr5_2:1734535-1734554 | Msa0748480:CDS | 40.0% | |
| GTTGATCTTGCTTGCTTCTA+GGG | - | chr5_2:1734536-1734555 | Msa0748480:CDS | 40.0% | |
| !! | GTTGTGGTTTGTTAACCATC+AGG | - | chr5_2:1734782-1734801 | Msa0748480:intron | 40.0% |
| TAACCATCAGGGAGAAGAAT+TGG | - | chr5_2:1734794-1734813 | Msa0748480:intron | 40.0% | |
| ATACCAATTCTTCTCCCTGA+TGG | + | chr5_2:1734800-1734819 | None:intergenic | 40.0% | |
| TCAGGGAGAAGAATTGGTAT+AGG | - | chr5_2:1734800-1734819 | Msa0748480:intron | 40.0% | |
| CAAAGACAAGGAGGAAACTA+TGG | - | chr5_2:1734846-1734865 | Msa0748480:intron | 40.0% | |
| AATCATGAGCAGTGGCTATA+GGG | - | chr5_2:1734962-1734981 | Msa0748480:intron | 40.0% | |
| TGCTATAGTTGCAACCTGAT+TGG | - | chr5_2:1735072-1735091 | Msa0748480:intron | 40.0% | |
| !! | ATGTGTACATCGCTTTTGAG+AGG | - | chr5_2:1735174-1735193 | Msa0748480:intron | 40.0% |
| GGTAGTCCAAAACAGTTCAA+TGG | + | chr5_2:1735208-1735227 | None:intergenic | 40.0% | |
| TTGGACTACCATGAGATGAA+TGG | - | chr5_2:1735218-1735237 | Msa0748480:intron | 40.0% | |
| AGATGAATGGCCTATACCTT+GGG | - | chr5_2:1735231-1735250 | Msa0748480:intron | 40.0% | |
| TGGGATATTATCAGTCACCT+TGG | - | chr5_2:1735530-1735549 | Msa0748480:intron | 40.0% | |
| AAGTGTATGACAGTGTTTCC+AGG | - | chr5_2:1735662-1735681 | Msa0748480:intron | 40.0% | |
| AATGTCACACTCATCAAGCT+TGG | - | chr5_2:1736011-1736030 | Msa0748480:intron | 40.0% | |
| CTGGTCATTGAAGACCATAT+TGG | - | chr5_2:1736315-1736334 | Msa0748480:intron | 40.0% | |
| !!! | TTACTTTTTAGGCCTGAGTC+TGG | - | chr5_2:1736475-1736494 | Msa0748480:intron | 40.0% |
| AAAAGCCTCTTACGCCAATT+AGG | + | chr5_2:1736807-1736826 | None:intergenic | 40.0% | |
| ! | CCTATTTAGCTTAAAAGGCC+AGG | + | chr5_2:1736844-1736863 | None:intergenic | 40.0% |
| !! | CCTGGCCTTTTAAGCTAAAT+AGG | - | chr5_2:1736841-1736860 | Msa0748480:intron | 40.0% |
| TTTAAGAAAAAAGCCTGGCC+TGG | - | chr5_2:1736891-1736910 | Msa0748480:intron | 40.0% | |
| !!! | CTTTTGAGATGACTAGGGAT+GGG | + | chr5_2:1736965-1736984 | None:intergenic | 40.0% |
| !!! | TCTTTTGAGATGACTAGGGA+TGG | + | chr5_2:1736966-1736985 | None:intergenic | 40.0% |
| TTGCTAGATCTAGTGAAACC+GGG | + | chr5_2:1737041-1737060 | None:intergenic | 40.0% | |
| GGATCAGTCTATGAGAAAAG+AGG | + | chr5_2:1737171-1737190 | None:intergenic | 40.0% | |
| GGTATATCAAAGGGTCTCAA+AGG | + | chr5_2:1737198-1737217 | None:intergenic | 40.0% | |
| ATGCAATAGCTTGAATCCTG+AGG | + | chr5_2:1737219-1737238 | None:intergenic | 40.0% | |
| GTCCACAACAATGATGACAA+AGG | - | chr5_2:1737273-1737292 | Msa0748480:intron | 40.0% | |
| ACCCTTTGTCATCATTGTTG+TGG | + | chr5_2:1737278-1737297 | None:intergenic | 40.0% | |
| CATCTACCATGGTCTGAAAA+GGG | - | chr5_2:1737348-1737367 | Msa0748480:intron | 40.0% | |
| !! | AAGCTCATTGGTTCACATAC+GGG | + | chr5_2:1737411-1737430 | None:intergenic | 40.0% |
| ! | ATCAGAATTGTTACTTCGGC+GGG | + | chr5_2:1737477-1737496 | None:intergenic | 40.0% |
| ! | GATCAGAATTGTTACTTCGG+CGG | + | chr5_2:1737478-1737497 | None:intergenic | 40.0% |
| !!! | CCTGTACCAGTTTTGGAAAA+CGG | - | chr5_2:1737820-1737839 | Msa0748480:intron | 40.0% |
| AAACGATTGAGAGGGACATA+GGG | + | chr5_2:1737924-1737943 | None:intergenic | 40.0% | |
| AAAACGATTGAGAGGGACAT+AGG | + | chr5_2:1737925-1737944 | None:intergenic | 40.0% | |
| GAGGAAGAAAACGATTGAGA+GGG | + | chr5_2:1737932-1737951 | None:intergenic | 40.0% | |
| TGAGGAAGAAAACGATTGAG+AGG | + | chr5_2:1737933-1737952 | None:intergenic | 40.0% | |
| ATTTGTAGCATGGAACAGCA+TGG | + | chr5_2:1737987-1738006 | None:intergenic | 40.0% | |
| CTGTTCCATGCTACAAATCT+TGG | - | chr5_2:1737989-1738008 | Msa0748480:intron | 40.0% | |
| ATCATGGTGTGAAAACTGTG+TGG | + | chr5_2:1738047-1738066 | None:intergenic | 40.0% | |
| ! | CTGTTAAATTTTGCTACGGC+TGG | - | chr5_2:1738109-1738128 | Msa0748480:intron | 40.0% |
| ATGGCATTGTTGTCGTAGTT+AGG | - | chr5_2:1738301-1738320 | Msa0748480:intron | 40.0% | |
| TAGTTAGGTTAGGGTTGGAT+TGG | - | chr5_2:1738316-1738335 | Msa0748480:intron | 40.0% | |
| !! | GTTAGGGTTGGATTGGTTTA+GGG | - | chr5_2:1738323-1738342 | Msa0748480:intron | 40.0% |
| !! | TTAGGGTTGGATTGGTTTAG+GGG | - | chr5_2:1738324-1738343 | Msa0748480:intron | 40.0% |
| TTATGAGCCCAAACATTTGG+TGG | - | chr5_2:1738421-1738440 | Msa0748480:intron | 40.0% | |
| TCATGATCCAGAAACTTCAG+TGG | - | chr5_2:1738560-1738579 | Msa0748480:intron | 40.0% | |
| GATCAAACCACTGAAGTTTC+TGG | + | chr5_2:1738570-1738589 | None:intergenic | 40.0% | |
| AACTTCAGTGGTTTGATCTC+TGG | - | chr5_2:1738572-1738591 | Msa0748480:intron | 40.0% | |
| AAGATCGAAAGCCAAAATCG+TGG | + | chr5_2:1738676-1738695 | None:intergenic | 40.0% | |
| !!! | TGAGTCCTCTTGTTTTGAAG+AGG | - | chr5_2:1738787-1738806 | Msa0748480:intron | 40.0% |
| !!! | GAGTCCTCTTGTTTTGAAGA+GGG | - | chr5_2:1738788-1738807 | Msa0748480:intron | 40.0% |
| TGGGGTAAAAACAAACAAGC+AGG | + | chr5_2:1738825-1738844 | None:intergenic | 40.0% | |
| !!! | TTGGCTGCACTGTGTTTTTT+GGG | + | chr5_2:1738844-1738863 | None:intergenic | 40.0% |
| ! | ATCGTGCTCCTCAATTTTGT+TGG | + | chr5_2:1738863-1738882 | None:intergenic | 40.0% |
| CATACAATAGCGCTGCTTAT+TGG | - | chr5_2:1739088-1739107 | Msa0748480:intron | 40.0% | |
| AATATGTTGCCCATGATGTC+CGG | + | chr5_2:1739378-1739397 | None:intergenic | 40.0% | |
| CAATTACAGCATGAGTTCCT+CGG | + | chr5_2:1739402-1739421 | None:intergenic | 40.0% | |
| AGCCAGGATCTCTTTAATGA+AGG | - | chr5_2:1739444-1739463 | Msa0748480:intron | 40.0% | |
| !!! | GATGAACTTTTCAGGTTGCT+GGG | - | chr5_2:1739466-1739485 | Msa0748480:intron | 40.0% |
| ACAGCATCAAGGATCATGAT+TGG | - | chr5_2:1739590-1739609 | Msa0748480:CDS | 40.0% | |
| TCCATCCAAGACCATCATAA+AGG | + | chr5_2:1739651-1739670 | None:intergenic | 40.0% | |
| AATTCATACACACACTAGCC+TGG | + | chr5_2:1739805-1739824 | None:intergenic | 40.0% | |
| CAGATAAAAGGAAGTGACCA+AGG | + | chr5_2:1739916-1739935 | None:intergenic | 40.0% | |
| GGATGCAGCAAACAGATAAA+AGG | + | chr5_2:1739928-1739947 | None:intergenic | 40.0% | |
| CAGATAGGCTAATTGATGAG+AGG | + | chr5_2:1739949-1739968 | None:intergenic | 40.0% | |
| ! | AATTAGCCTATCTGTATGGC+TGG | - | chr5_2:1739955-1739974 | Msa0748480:five_prime_UTR | 40.0% |
| ! | ATTAGCCTATCTGTATGGCT+GGG | - | chr5_2:1739956-1739975 | Msa0748480:five_prime_UTR | 40.0% |
| CATATAAAGCCAACAAGGCA+AGG | + | chr5_2:1739985-1740004 | None:intergenic | 40.0% | |
| GTTGCGATTGCGAAGAGAAT+TGG | + | chr5_2:1734053-1734072 | None:intergenic | 45.0% | |
| GGGCAATGATGTCTAGATTC+TGG | - | chr5_2:1734299-1734318 | Msa0748480:CDS | 45.0% | |
| ! | GTTGTTGGATTGGATAACGC+TGG | - | chr5_2:1734358-1734377 | Msa0748480:CDS | 45.0% |
| TATAGGCGGTGACAAAGACA+AGG | - | chr5_2:1734834-1734853 | Msa0748480:intron | 45.0% | |
| ! | ACTTTGTTGTCAGGGTGACA+TGG | - | chr5_2:1734912-1734931 | Msa0748480:intron | 45.0% |
| GAATCATGAGCAGTGGCTAT+AGG | - | chr5_2:1734961-1734980 | Msa0748480:intron | 45.0% | |
| TGGCTATAGGGTTTGATCGT+GGG | - | chr5_2:1734974-1734993 | Msa0748480:intron | 45.0% | |
| ! | AACCTGATTGGCCGTCTTTA+AGG | - | chr5_2:1735084-1735103 | Msa0748480:intron | 45.0% |
| GGTATAGGCCATTCATCTCA+TGG | + | chr5_2:1735229-1735248 | None:intergenic | 45.0% | |
| GAGATGAATGGCCTATACCT+TGG | - | chr5_2:1735230-1735249 | Msa0748480:intron | 45.0% | |
| TTGCTGGGTAAGAGCTAGTT+TGG | - | chr5_2:1735254-1735273 | Msa0748480:intron | 45.0% | |
| TTTGTCCCAAATCCTGCTGA+TGG | + | chr5_2:1735383-1735402 | None:intergenic | 45.0% | |
| GACAAACGCGATCCCTAATA+TGG | - | chr5_2:1735397-1735416 | Msa0748480:intron | 45.0% | |
| GGGACGAACATTGCAATTTG+TGG | + | chr5_2:1735444-1735463 | None:intergenic | 45.0% | |
| !! | TTGATGGTGCATCAGAAGTC+TGG | + | chr5_2:1735578-1735597 | None:intergenic | 45.0% |
| TGACATTTACACCAGCTTGG+AGG | + | chr5_2:1735998-1736017 | None:intergenic | 45.0% | |
| GTGTGACATTTACACCAGCT+TGG | + | chr5_2:1736001-1736020 | None:intergenic | 45.0% | |
| TGAAGTCCGTATGTCCATGT+TGG | - | chr5_2:1736175-1736194 | Msa0748480:intron | 45.0% | |
| ! | TGTTTGAGCTGCCCTGTTTT+TGG | + | chr5_2:1736224-1736243 | None:intergenic | 45.0% |
| AAACAGGGCAGCTCAAACAA+AGG | - | chr5_2:1736225-1736244 | Msa0748480:intron | 45.0% | |
| CTTATCATAGTTGCCTTGCG+AGG | - | chr5_2:1736272-1736291 | Msa0748480:intron | 45.0% | |
| TAAGGCTACTGGTCATCTCT+AGG | - | chr5_2:1736354-1736373 | Msa0748480:intron | 45.0% | |
| AAGGCTACTGGTCATCTCTA+GGG | - | chr5_2:1736355-1736374 | Msa0748480:intron | 45.0% | |
| ! | TACTGGTCATCTCTAGGGAT+GGG | - | chr5_2:1736360-1736379 | Msa0748480:intron | 45.0% |
| ! | TCATCTCTAGGGATGGGAAT+AGG | - | chr5_2:1736366-1736385 | Msa0748480:intron | 45.0% |
| CTTATTTAGCAGGCCGTATC+AGG | + | chr5_2:1736512-1736531 | None:intergenic | 45.0% | |
| ! | GGCGTAAGAGGCTTTTTGAA+TGG | - | chr5_2:1736811-1736830 | Msa0748480:intron | 45.0% |
| AGATGACTAGGGATGGGAAT+AGG | + | chr5_2:1736959-1736978 | None:intergenic | 45.0% | |
| GATCTAGTGAAACCGGGATA+TGG | + | chr5_2:1737035-1737054 | None:intergenic | 45.0% | |
| AAATGCAGATTGGGTCAGCT+CGG | + | chr5_2:1737124-1737143 | None:intergenic | 45.0% | |
| TCAAAGGGTCTCAAAGGGAA+AGG | + | chr5_2:1737192-1737211 | None:intergenic | 45.0% | |
| GAGACCCTTTGATATACCTC+AGG | - | chr5_2:1737200-1737219 | Msa0748480:intron | 45.0% | |
| GGGTATGTCAAGTCTAGTCA+CGG | - | chr5_2:1737294-1737313 | Msa0748480:intron | 45.0% | |
| GGTAGATGGTGAAGATTGGT+TGG | + | chr5_2:1737336-1737355 | None:intergenic | 45.0% | |
| CCATGGTAGATGGTGAAGAT+TGG | + | chr5_2:1737340-1737359 | None:intergenic | 45.0% | |
| CCAATCTTCACCATCTACCA+TGG | - | chr5_2:1737337-1737356 | Msa0748480:intron | 45.0% | |
| ! | CCTTTTCAGACCATGGTAGA+TGG | + | chr5_2:1737350-1737369 | None:intergenic | 45.0% |
| CCATCTACCATGGTCTGAAA+AGG | - | chr5_2:1737347-1737366 | Msa0748480:intron | 45.0% | |
| ! | TCAGAATTGTTACTTCGGCG+GGG | + | chr5_2:1737476-1737495 | None:intergenic | 45.0% |
| ! | GTTTTCATGATCGAACTGGC+TGG | - | chr5_2:1737726-1737745 | Msa0748480:intron | 45.0% |
| ! | CCGTTTTCCAAAACTGGTAC+AGG | + | chr5_2:1737823-1737842 | None:intergenic | 45.0% |
| ! | ACAGGACCGTTTTCCAAAAC+TGG | + | chr5_2:1737829-1737848 | None:intergenic | 45.0% |
| GTTGAAGGTTTGCGATCTGT+TGG | - | chr5_2:1738214-1738233 | Msa0748480:intron | 45.0% | |
| TGTCGTAGTTAGGTTAGGGT+TGG | - | chr5_2:1738311-1738330 | Msa0748480:intron | 45.0% | |
| !! | GGTTAGGGTTGGATTGGTTT+AGG | - | chr5_2:1738322-1738341 | Msa0748480:intron | 45.0% |
| CTTGTAAGAAGCTTGGCTAC+AGG | - | chr5_2:1738626-1738645 | Msa0748480:intron | 45.0% | |
| ! | ACTACCACTCACCACGATTT+TGG | - | chr5_2:1738662-1738681 | Msa0748480:intron | 45.0% |
| AAAGCCAAAATCGTGGTGAG+TGG | + | chr5_2:1738669-1738688 | None:intergenic | 45.0% | |
| GCTTTCGATCTTGCTTGCTT+GGG | - | chr5_2:1738684-1738703 | Msa0748480:intron | 45.0% | |
| !!! | TGGCTGCACTGTGTTTTTTG+GGG | + | chr5_2:1738843-1738862 | None:intergenic | 45.0% |
| !!! | GTTGGCTGCACTGTGTTTTT+TGG | + | chr5_2:1738845-1738864 | None:intergenic | 45.0% |
| CAGTGCAGCCAACAAAATTG+AGG | - | chr5_2:1738852-1738871 | Msa0748480:intron | 45.0% | |
| GTCCCACTTTCCACAATACA+CGG | - | chr5_2:1739027-1739046 | Msa0748480:intron | 45.0% | |
| TCCCACTTTCCACAATACAC+GGG | - | chr5_2:1739028-1739047 | Msa0748480:intron | 45.0% | |
| ! | TCATTTCAGGTCTGGGATCT+TGG | - | chr5_2:1739337-1739356 | Msa0748480:intron | 45.0% |
| AAGAAAGACTCCGGACATCA+TGG | - | chr5_2:1739365-1739384 | Msa0748480:intron | 45.0% | |
| AGAAAGACTCCGGACATCAT+GGG | - | chr5_2:1739366-1739385 | Msa0748480:intron | 45.0% | |
| TCATGGGCAACATATTACCG+AGG | - | chr5_2:1739382-1739401 | Msa0748480:intron | 45.0% | |
| !!! | GGATGAACTTTTCAGGTTGC+TGG | - | chr5_2:1739465-1739484 | Msa0748480:intron | 45.0% |
| ! | AGAGCATCAGTGATTTCAGC+AGG | + | chr5_2:1739562-1739581 | None:intergenic | 45.0% |
| ! | TCTGTCACTTCACAGCATCA+AGG | - | chr5_2:1739579-1739598 | Msa0748480:CDS | 45.0% |
| ! | GCCTTTATGATGGTCTTGGA+TGG | - | chr5_2:1739647-1739666 | Msa0748480:CDS | 45.0% |
| TAACCGGCAAAGCATGATGT+GGG | - | chr5_2:1739683-1739702 | Msa0748480:exon | 45.0% | |
| AAACCCACATCATGCTTTGC+CGG | + | chr5_2:1739689-1739708 | None:intergenic | 45.0% | |
| AAAGCATGATGTGGGTTTGC+TGG | - | chr5_2:1739691-1739710 | Msa0748480:five_prime_UTR | 45.0% | |
| !! | TGTGGGTTTGCTGGAAACTA+AGG | - | chr5_2:1739700-1739719 | Msa0748480:five_prime_UTR | 45.0% |
| !! | TAATTAGTTATTAATTAATT+TGG | - | chr5_2:1734239-1734258 | Msa0748480:three_prime_UTR | 5.0% |
| !! | AATTAGTTATTAATTAATTT+GGG | - | chr5_2:1734240-1734259 | Msa0748480:three_prime_UTR | 5.0% |
| AGAAAAGGATCGAACCTGGG+AGG | + | chr5_2:1734089-1734108 | None:intergenic | 50.0% | |
| CGACGTTGCTACCAACAGTA+GGG | + | chr5_2:1734435-1734454 | None:intergenic | 50.0% | |
| TCGACGTTGCTACCAACAGT+AGG | + | chr5_2:1734436-1734455 | None:intergenic | 50.0% | |
| GTGGCTATAGGGTTTGATCG+TGG | - | chr5_2:1734973-1734992 | Msa0748480:intron | 50.0% | |
| GGCTATAGGGTTTGATCGTG+GGG | - | chr5_2:1734975-1734994 | Msa0748480:intron | 50.0% | |
| GTCCTTAAAGACGGCCAATC+AGG | + | chr5_2:1735089-1735108 | None:intergenic | 50.0% | |
| TACCCAGCAACCCAAGGTAT+AGG | + | chr5_2:1735244-1735263 | None:intergenic | 50.0% | |
| AAGTTAAGGGGTCCATCAGC+AGG | - | chr5_2:1735368-1735387 | Msa0748480:intron | 50.0% | |
| !! | GGAGATGTGCATTTTGGCAG+AGG | - | chr5_2:1735418-1735437 | Msa0748480:intron | 50.0% |
| TGCTGATCCACTGAGTCATG+AGG | + | chr5_2:1735692-1735711 | None:intergenic | 50.0% | |
| ! | CTACTGGTCATCTCTAGGGA+TGG | - | chr5_2:1736359-1736378 | Msa0748480:intron | 50.0% |
| TCTAGGGATGGGAATAGGCT+AGG | - | chr5_2:1736371-1736390 | Msa0748480:intron | 50.0% | |
| AAATTTGGCAGGCTAGGCTC+AGG | + | chr5_2:1736417-1736436 | None:intergenic | 50.0% | |
| ! | GGCCTTCTGAAAGCCTGATA+CGG | - | chr5_2:1736496-1736515 | Msa0748480:intron | 50.0% |
| CTTCAATAGGCCGGCCTAAT+TGG | - | chr5_2:1736790-1736809 | Msa0748480:intron | 50.0% | |
| ! | GAGGCTTTTTGAATGGCCTG+TGG | - | chr5_2:1736818-1736837 | Msa0748480:intron | 50.0% |
| ! | TTTTTGAATGGCCTGTGGCC+TGG | - | chr5_2:1736823-1736842 | Msa0748480:intron | 50.0% |
| ! | GGGAATCCCTTTTCAGACCA+TGG | + | chr5_2:1737357-1737376 | None:intergenic | 50.0% |
| TGTCCAGGAAAAGTTGCGTC+AGG | + | chr5_2:1737694-1737713 | None:intergenic | 50.0% | |
| ATCGAACTGGCTGGTAGAAC+CGG | - | chr5_2:1737735-1737754 | Msa0748480:intron | 50.0% | |
| !! | ACTGGCTTGGAACCAAGTTC+GGG | + | chr5_2:1737763-1737782 | None:intergenic | 50.0% |
| !! | GACTGGCTTGGAACCAAGTT+CGG | + | chr5_2:1737764-1737783 | None:intergenic | 50.0% |
| AACTTGGTTCCAAGCCAGTC+AGG | - | chr5_2:1737764-1737783 | Msa0748480:intron | 50.0% | |
| ! | TTTAGATGGCCTGACTGGCT+TGG | + | chr5_2:1737776-1737795 | None:intergenic | 50.0% |
| AGCTGTTTAGATGGCCTGAC+TGG | + | chr5_2:1737781-1737800 | None:intergenic | 50.0% | |
| ! | CGCAGAACCTGTACCAGTTT+TGG | - | chr5_2:1737813-1737832 | Msa0748480:intron | 50.0% |
| TTGGAAAACGGTCCTGTCCA+AGG | - | chr5_2:1737832-1737851 | Msa0748480:intron | 50.0% | |
| TGGAAAACGGTCCTGTCCAA+GGG | - | chr5_2:1737833-1737852 | Msa0748480:intron | 50.0% | |
| ATGGAACAGCATGGAGGAAG+GGG | + | chr5_2:1737978-1737997 | None:intergenic | 50.0% | |
| CATGGAACAGCATGGAGGAA+GGG | + | chr5_2:1737979-1737998 | None:intergenic | 50.0% | |
| TGTAGCATGGAACAGCATGG+AGG | + | chr5_2:1737984-1738003 | None:intergenic | 50.0% | |
| GACGACAATGACATGCTGAG+GGG | + | chr5_2:1738025-1738044 | None:intergenic | 50.0% | |
| GGACGACAATGACATGCTGA+GGG | + | chr5_2:1738026-1738045 | None:intergenic | 50.0% | |
| TGGACGACAATGACATGCTG+AGG | + | chr5_2:1738027-1738046 | None:intergenic | 50.0% | |
| TTTGTTCAACCTGGGCAGAG+TGG | + | chr5_2:1738071-1738090 | None:intergenic | 50.0% | |
| GGTTTGCGATCTGTTGGTGT+TGG | - | chr5_2:1738220-1738239 | Msa0748480:intron | 50.0% | |
| GGCTTTCGATCTTGCTTGCT+TGG | - | chr5_2:1738683-1738702 | Msa0748480:intron | 50.0% | |
| CCTGCCCTCTTCAAAACAAG+AGG | + | chr5_2:1738795-1738814 | None:intergenic | 50.0% | |
| !!! | CCTCTTGTTTTGAAGAGGGC+AGG | - | chr5_2:1738792-1738811 | Msa0748480:intron | 50.0% |
| CCCCGTGTATTGTGGAAAGT+GGG | + | chr5_2:1739032-1739051 | None:intergenic | 50.0% | |
| CCCACTTTCCACAATACACG+GGG | - | chr5_2:1739029-1739048 | Msa0748480:intron | 50.0% | |
| ACCCCGTGTATTGTGGAAAG+TGG | + | chr5_2:1739033-1739052 | None:intergenic | 50.0% | |
| TCCACAATACACGGGGTAGT+TGG | - | chr5_2:1739036-1739055 | Msa0748480:intron | 50.0% | |
| ACCAACTACCCCGTGTATTG+TGG | + | chr5_2:1739040-1739059 | None:intergenic | 50.0% | |
| ! | TTTCAGGTCTGGGATCTTGG+CGG | - | chr5_2:1739340-1739359 | Msa0748480:intron | 50.0% |
| ! | TTGGCGGACAAGAAAGACTC+CGG | - | chr5_2:1739356-1739375 | Msa0748480:intron | 50.0% |
| ATAAAGGCCGTCTCCTGAGA+GGG | + | chr5_2:1739635-1739654 | None:intergenic | 50.0% | |
| TCAGGAGACGGCCTTTATGA+TGG | - | chr5_2:1739637-1739656 | Msa0748480:CDS | 50.0% | |
| GACGGCCTTTATGATGGTCT+TGG | - | chr5_2:1739643-1739662 | Msa0748480:CDS | 50.0% | |
| !! | GATGGTCTTGGATGGATTGC+CGG | - | chr5_2:1739655-1739674 | Msa0748480:CDS | 50.0% |
| !! | ATGGTCTTGGATGGATTGCC+GGG | - | chr5_2:1739656-1739675 | Msa0748480:CDS | 50.0% |
| GTAACCGGCAAAGCATGATG+TGG | - | chr5_2:1739682-1739701 | Msa0748480:exon | 50.0% | |
| GGAAACCCAGCCATACAGAT+AGG | + | chr5_2:1739964-1739983 | None:intergenic | 50.0% | |
| AGGCGGTGACAAAGACAAGG+AGG | - | chr5_2:1734837-1734856 | Msa0748480:intron | 55.0% | |
| GGGAGCAATGCAAGTAGAGC+TGG | - | chr5_2:1734995-1735014 | Msa0748480:intron | 55.0% | |
| ! | TGGCCTATACCTTGGGTTGC+TGG | - | chr5_2:1735238-1735257 | Msa0748480:intron | 55.0% |
| ! | GGCCTATACCTTGGGTTGCT+GGG | - | chr5_2:1735239-1735258 | Msa0748480:intron | 55.0% |
| AGCTCTTACCCAGCAACCCA+AGG | + | chr5_2:1735250-1735269 | None:intergenic | 55.0% | |
| AGGGGTCCATCAGCAGGATT+TGG | - | chr5_2:1735374-1735393 | Msa0748480:intron | 55.0% | |
| GGGGTCCATCAGCAGGATTT+GGG | - | chr5_2:1735375-1735394 | Msa0748480:intron | 55.0% | |
| ACTGAGTCATGAGGCATGCC+TGG | + | chr5_2:1735683-1735702 | None:intergenic | 55.0% | |
| AGGCATGCCTCATGACTCAG+TGG | - | chr5_2:1735682-1735701 | Msa0748480:intron | 55.0% | |
| CTCAACACTCTCCTCCAAGC+TGG | - | chr5_2:1735984-1736003 | Msa0748480:intron | 55.0% | |
| !! | ACCAAGTCTCTAAGGCCCGA+GGG | + | chr5_2:1736051-1736070 | None:intergenic | 55.0% |
| AGGCCTTGCAAAGCCTAGCT+CGG | + | chr5_2:1736397-1736416 | None:intergenic | 55.0% | |
| GCTTTCAGAAGGCCAGACTC+AGG | + | chr5_2:1736490-1736509 | None:intergenic | 55.0% | |
| GGCCGTATCAGGCTTTCAGA+AGG | + | chr5_2:1736501-1736520 | None:intergenic | 55.0% | |
| GCCTCTTACGCCAATTAGGC+CGG | + | chr5_2:1736803-1736822 | None:intergenic | 55.0% | |
| AGCTTAAAAGGCCAGGCCAC+AGG | + | chr5_2:1736837-1736856 | None:intergenic | 55.0% | |
| ACTAGGGATGGGAATAGGCC+AGG | + | chr5_2:1736954-1736973 | None:intergenic | 55.0% | |
| ! | GGACCTGACGCAACTTTTCC+TGG | - | chr5_2:1737688-1737707 | Msa0748480:intron | 55.0% |
| TCGAACTGGCTGGTAGAACC+GGG | - | chr5_2:1737736-1737755 | Msa0748480:intron | 55.0% | |
| TTGGAACCAAGTTCGGGTCC+CGG | + | chr5_2:1737757-1737776 | None:intergenic | 55.0% | |
| GGAAAACGGTCCTGTCCAAG+GGG | - | chr5_2:1737834-1737853 | Msa0748480:intron | 55.0% | |
| ACAGTGAGCAAGGCAGTGTG+AGG | + | chr5_2:1737951-1737970 | None:intergenic | 55.0% | |
| AAGGGGAACGACAGTGAGCA+AGG | + | chr5_2:1737961-1737980 | None:intergenic | 55.0% | |
| GCATGGAACAGCATGGAGGA+AGG | + | chr5_2:1737980-1737999 | None:intergenic | 55.0% | |
| CAATGACATGCTGAGGGGTG+TGG | + | chr5_2:1738020-1738039 | None:intergenic | 55.0% | |
| GCTACGGCTGGAATGCATGT+AGG | - | chr5_2:1738121-1738140 | Msa0748480:intron | 55.0% | |
| TCGACAGCAGTGATAGAGCC+AGG | - | chr5_2:1739428-1739447 | Msa0748480:intron | 55.0% | |
| CATAAAGGCCGTCTCCTGAG+AGG | + | chr5_2:1739636-1739655 | None:intergenic | 55.0% | |
| CCAAGGTGCATGCAATGCAG+AGG | + | chr5_2:1739899-1739918 | None:intergenic | 55.0% | |
| CCTCTGCATTGCATGCACCT+TGG | - | chr5_2:1739896-1739915 | Msa0748480:five_prime_UTR | 55.0% | |
| GCTGGGTTTCCTTGCCTTGT+TGG | - | chr5_2:1739973-1739992 | Msa0748480:five_prime_UTR | 55.0% | |
| CACAGACAACGCTACCTCCC+AGG | - | chr5_2:1734072-1734091 | Msa0748480:three_prime_UTR | 60.0% | |
| ACCCTCGGGCCTTAGAGACT+TGG | - | chr5_2:1736047-1736066 | Msa0748480:intron | 60.0% | |
| !! | CACCAAGTCTCTAAGGCCCG+AGG | + | chr5_2:1736052-1736071 | None:intergenic | 60.0% |
| GGAATAGGCTAGGCCGAGCT+AGG | - | chr5_2:1736381-1736400 | Msa0748480:intron | 60.0% | |
| AGGCCGAGCTAGGCTTTGCA+AGG | - | chr5_2:1736391-1736410 | Msa0748480:intron | 60.0% | |
| TAAGGCCTAAGCCTGGCCTG+CGG | - | chr5_2:1736440-1736459 | Msa0748480:intron | 60.0% | |
| GTAAGCCTATGACAGGCCGC+AGG | + | chr5_2:1736459-1736478 | None:intergenic | 60.0% | |
| GCCGGCCTAATTGGCGTAAG+AGG | - | chr5_2:1736799-1736818 | Msa0748480:intron | 60.0% | |
| GTAGAACCGGGACCCGAACT+TGG | - | chr5_2:1737748-1737767 | Msa0748480:intron | 60.0% | |
| ACCATGATGCCACTCTGCCC+AGG | - | chr5_2:1738059-1738078 | Msa0748480:intron | 60.0% | |
| ACCTGGGCAGAGTGGCATCA+TGG | + | chr5_2:1738063-1738082 | None:intergenic | 60.0% | |
| TGGATTGCCGGGCGAGTAAC+CGG | - | chr5_2:1739667-1739686 | Msa0748480:exon | 60.0% | |
| ! | TGCTTTGCCGGTTACTCGCC+CGG | + | chr5_2:1739677-1739696 | None:intergenic | 60.0% |
| CCTACGGCCTAGCCTACGAC+AGG | + | chr5_2:1736917-1736936 | None:intergenic | 65.0% | |
| CCTGTCGTAGGCTAGGCCGT+AGG | - | chr5_2:1736914-1736933 | Msa0748480:intron | 65.0% | |
| ATAGGCCAGGCCGGCCTACA+GGG | + | chr5_2:1736941-1736960 | None:intergenic | 65.0% | |
| AATAGGCCAGGCCGGCCTAC+AGG | + | chr5_2:1736942-1736961 | None:intergenic | 65.0% | |
| GGGATGGGAATAGGCCAGGC+CGG | + | chr5_2:1736950-1736969 | None:intergenic | 65.0% | |
| CAAGCTTGCAGCGCCCTCTC+AGG | - | chr5_2:1739619-1739638 | Msa0748480:CDS | 65.0% | |
| TGCAGCGCCCTCTCAGGAGA+CGG | - | chr5_2:1739625-1739644 | Msa0748480:CDS | 65.0% | |
| ACAGGCCGCAGGCCAGGCTT+AGG | + | chr5_2:1736448-1736467 | None:intergenic | 70.0% | |
| CCTATGACAGGCCGCAGGCC+AGG | + | chr5_2:1736454-1736473 | None:intergenic | 70.0% | |
| CCTGGCCTGCGGCCTGTCAT+AGG | - | chr5_2:1736451-1736470 | Msa0748480:intron | 70.0% | |
| AGCCTGGCCTGGCCTGTCGT+AGG | - | chr5_2:1736902-1736921 | Msa0748480:intron | 70.0% | |
| AGCCTACGACAGGCCAGGCC+AGG | + | chr5_2:1736907-1736926 | None:intergenic | 70.0% | |
| GGCCTGGCCTGTCGTAGGCT+AGG | - | chr5_2:1736907-1736926 | Msa0748480:intron | 70.0% | |
| GGCCTAGCCTACGACAGGCC+AGG | + | chr5_2:1736912-1736931 | None:intergenic | 70.0% | |
| GCTAGGCCGTAGGCCCCTGT+AGG | - | chr5_2:1736924-1736943 | Msa0748480:intron | 70.0% | |
| TAGGCCAGGCCGGCCTACAG+GGG | + | chr5_2:1736940-1736959 | None:intergenic | 70.0% | |
| GGCCGTAGGCCCCTGTAGGC+CGG | - | chr5_2:1736928-1736947 | Msa0748480:intron | 75.0% | |
| GGCCGGCCTACAGGGGCCTA+CGG | + | chr5_2:1736933-1736952 | None:intergenic | 75.0% | |
| TAGGCCCCTGTAGGCCGGCC+TGG | - | chr5_2:1736933-1736952 | Msa0748480:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 1733942 | 1740038 | 1733942 | ID=Msa0748480;Name=Msa0748480 |
| chr5_2 | mRNA | 1733942 | 1740038 | 1733942 | ID=Msa0748480-mRNA-1;Parent=Msa0748480;Name=Msa0748480-mRNA-1;_AED=0.02;_eAED=0.02;_QI=215|1|1|1|0.5|0.33|3|339|181 |
| chr5_2 | exon | 1733942 | 1734634 | 1733942 | ID=Msa0748480-mRNA-1:exon:505;Parent=Msa0748480-mRNA-1 |
| chr5_2 | exon | 1739494 | 1739748 | 1739494 | ID=Msa0748480-mRNA-1:exon:504;Parent=Msa0748480-mRNA-1 |
| chr5_2 | exon | 1739887 | 1740038 | 1739887 | ID=Msa0748480-mRNA-1:exon:503;Parent=Msa0748480-mRNA-1 |
| chr5_2 | five_prime_UTR | 1739887 | 1740038 | 1739887 | ID=Msa0748480-mRNA-1:five_prime_utr;Parent=Msa0748480-mRNA-1 |
| chr5_2 | five_prime_UTR | 1739686 | 1739748 | 1739686 | ID=Msa0748480-mRNA-1:five_prime_utr;Parent=Msa0748480-mRNA-1 |
| chr5_2 | CDS | 1739494 | 1739685 | 1739494 | ID=Msa0748480-mRNA-1:cds;Parent=Msa0748480-mRNA-1 |
| chr5_2 | CDS | 1734281 | 1734634 | 1734281 | ID=Msa0748480-mRNA-1:cds;Parent=Msa0748480-mRNA-1 |
| chr5_2 | three_prime_UTR | 1733942 | 1734280 | 1733942 | ID=Msa0748480-mRNA-1:three_prime_utr;Parent=Msa0748480-mRNA-1 |
| Gene Sequence |
| Protein sequence |
