Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0882830 | XP_013451687.1 | 97.433 | 818 | 16 | 1 | 1 | 818 | 1 | 813 | 0.0 | 1628 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0882830 | sp|Q7ZZ25|ATD1A_DANRE | 44.815 | 270 | 143 | 4 | 487 | 751 | 73 | 341 | 2.58e-71 | 242 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0882830 | A0A072UIT2 | 97.433 | 818 | 16 | 1 | 1 | 818 | 1 | 813 | 0.0 | 1628 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0882830 | Msa0910180 | 0.939119 | 2.169993e-99 | -8.615850e-47 |
Msa0882830 | Msa0947930 | 0.821941 | 3.088324e-53 | -8.615850e-47 |
Msa0882830 | Msa0984510 | 0.876706 | 1.128440e-68 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0882830 | MtrunA17_Chr6g0462581 | 97.433 | 818 | 16 | 1 | 1 | 818 | 1 | 813 | 0.0 | 1628 |
Msa0882830 | MtrunA17_Chr5g0397121 | 67.028 | 831 | 258 | 8 | 1 | 818 | 1 | 828 | 0.0 | 1102 |
Msa0882830 | MtrunA17_Chr8g0387641 | 63.457 | 862 | 256 | 14 | 1 | 818 | 1 | 847 | 0.0 | 1048 |
Msa0882830 | MtrunA17_Chr1g0202381 | 59.879 | 825 | 254 | 11 | 3 | 818 | 29 | 785 | 0.0 | 927 |
Msa0882830 | MtrunA17_Chr1g0202371 | 56.295 | 826 | 240 | 12 | 1 | 818 | 1 | 713 | 0.0 | 832 |
Msa0882830 | MtrunA17_Chr3g0116131 | 37.768 | 887 | 373 | 19 | 49 | 818 | 383 | 1207 | 1.55e-176 | 540 |
Msa0882830 | MtrunA17_Chr1g0204031 | 72.485 | 338 | 89 | 3 | 485 | 818 | 537 | 874 | 9.65e-160 | 487 |
Msa0882830 | MtrunA17_Chr1g0195741 | 42.720 | 625 | 254 | 10 | 237 | 818 | 680 | 1243 | 5.60e-159 | 495 |
Msa0882830 | MtrunA17_Chr1g0195741 | 37.963 | 108 | 59 | 2 | 49 | 154 | 424 | 525 | 1.76e-14 | 78.2 |
Msa0882830 | MtrunA17_Chr1g0195731 | 43.065 | 620 | 255 | 11 | 239 | 818 | 678 | 1239 | 1.13e-153 | 481 |
Msa0882830 | MtrunA17_Chr1g0195731 | 40.426 | 94 | 54 | 1 | 45 | 136 | 413 | 506 | 3.31e-14 | 77.0 |
Msa0882830 | MtrunA17_Chr4g0038101 | 42.248 | 516 | 219 | 5 | 308 | 816 | 570 | 1013 | 5.50e-125 | 400 |
Msa0882830 | MtrunA17_Chr3g0127401 | 48.039 | 306 | 127 | 6 | 487 | 785 | 63 | 343 | 4.84e-83 | 270 |
Msa0882830 | MtrunA17_Chr3g0127431 | 50.183 | 273 | 133 | 3 | 484 | 754 | 63 | 334 | 3.03e-82 | 269 |
Msa0882830 | MtrunA17_Chr6g0459561 | 42.216 | 334 | 152 | 9 | 485 | 804 | 352 | 658 | 1.00e-70 | 245 |
Msa0882830 | MtrunA17_Chr6g0459541 | 37.883 | 359 | 157 | 11 | 485 | 804 | 12 | 343 | 8.28e-65 | 220 |
Msa0882830 | MtrunA17_Chr7g0246111 | 42.294 | 279 | 150 | 5 | 454 | 730 | 168 | 437 | 1.62e-62 | 219 |
Msa0882830 | MtrunA17_Chr4g0004121 | 42.222 | 270 | 147 | 4 | 483 | 745 | 221 | 488 | 7.27e-62 | 218 |
Msa0882830 | MtrunA17_Chr4g0052271 | 46.320 | 231 | 120 | 4 | 505 | 733 | 119 | 347 | 9.10e-59 | 205 |
Msa0882830 | MtrunA17_Chr4g0026631 | 47.598 | 229 | 112 | 5 | 505 | 729 | 127 | 351 | 1.13e-57 | 203 |
Msa0882830 | MtrunA17_Chr2g0321241 | 46.725 | 229 | 114 | 5 | 505 | 729 | 132 | 356 | 1.41e-57 | 203 |
Msa0882830 | MtrunA17_Chr6g0459551 | 38.889 | 324 | 147 | 9 | 485 | 765 | 72 | 387 | 7.23e-54 | 192 |
Msa0882830 | MtrunA17_Chr2g0327121 | 39.370 | 254 | 145 | 6 | 505 | 753 | 480 | 729 | 1.20e-47 | 182 |
Msa0882830 | MtrunA17_Chr2g0327121 | 39.300 | 257 | 147 | 5 | 505 | 758 | 207 | 457 | 1.17e-42 | 167 |
Msa0882830 | MtrunA17_Chr7g0264521 | 35.082 | 305 | 184 | 8 | 505 | 804 | 479 | 774 | 2.36e-47 | 181 |
Msa0882830 | MtrunA17_Chr7g0264521 | 39.300 | 257 | 147 | 5 | 505 | 758 | 206 | 456 | 2.99e-45 | 174 |
Msa0882830 | MtrunA17_Chr1g0180791 | 35.410 | 305 | 184 | 8 | 505 | 804 | 478 | 774 | 4.09e-47 | 180 |
Msa0882830 | MtrunA17_Chr1g0180791 | 39.689 | 257 | 146 | 5 | 505 | 758 | 205 | 455 | 1.17e-45 | 176 |
Msa0882830 | MtrunA17_Chr6g0459531 | 35.314 | 303 | 140 | 8 | 505 | 804 | 67 | 316 | 1.19e-45 | 166 |
Msa0882830 | MtrunA17_Chr3g0145011 | 37.778 | 270 | 146 | 10 | 499 | 753 | 136 | 398 | 1.17e-41 | 157 |
Msa0882830 | MtrunA17_Chr3g0141901 | 36.496 | 274 | 157 | 9 | 499 | 762 | 133 | 399 | 2.82e-41 | 156 |
Msa0882830 | MtrunA17_Chr3g0135721 | 42.128 | 235 | 125 | 7 | 496 | 725 | 215 | 443 | 5.97e-41 | 160 |
Msa0882830 | MtrunA17_Chr7g0255721 | 34.965 | 286 | 153 | 7 | 475 | 729 | 628 | 911 | 8.97e-41 | 161 |
Msa0882830 | MtrunA17_Chr7g0255721 | 32.609 | 276 | 169 | 8 | 543 | 805 | 422 | 693 | 1.27e-31 | 132 |
Msa0882830 | MtrunA17_Chr3g0135761 | 42.979 | 235 | 123 | 7 | 496 | 725 | 213 | 441 | 9.03e-41 | 160 |
Msa0882830 | MtrunA17_Chr8g0362771 | 41.667 | 240 | 126 | 7 | 491 | 725 | 227 | 457 | 1.41e-40 | 159 |
Msa0882830 | MtrunA17_Chr7g0217421 | 40.909 | 242 | 135 | 6 | 504 | 740 | 38 | 276 | 1.80e-40 | 154 |
Msa0882830 | MtrunA17_Chr7g0255901 | 34.211 | 304 | 167 | 10 | 505 | 802 | 639 | 915 | 4.28e-40 | 159 |
Msa0882830 | MtrunA17_Chr3g0143721 | 39.759 | 249 | 138 | 7 | 502 | 741 | 246 | 491 | 7.05e-40 | 157 |
Msa0882830 | MtrunA17_Chr5g0429571 | 42.731 | 227 | 119 | 5 | 505 | 723 | 313 | 536 | 8.98e-40 | 157 |
Msa0882830 | MtrunA17_Chr7g0255641 | 37.118 | 229 | 138 | 4 | 505 | 729 | 658 | 884 | 9.37e-40 | 158 |
Msa0882830 | MtrunA17_Chr7g0255641 | 32.852 | 277 | 145 | 11 | 544 | 814 | 432 | 673 | 2.19e-29 | 125 |
Msa0882830 | MtrunA17_Chr3g0104211 | 43.860 | 228 | 115 | 6 | 505 | 723 | 304 | 527 | 1.44e-39 | 157 |
Msa0882830 | MtrunA17_Chr7g0255651 | 38.819 | 237 | 138 | 4 | 505 | 736 | 282 | 516 | 2.00e-38 | 151 |
Msa0882830 | MtrunA17_Chr7g0255651 | 27.984 | 243 | 159 | 5 | 530 | 765 | 38 | 271 | 7.21e-15 | 78.6 |
Msa0882830 | MtrunA17_Chr4g0050561 | 37.931 | 232 | 132 | 7 | 506 | 729 | 157 | 384 | 3.14e-38 | 147 |
Msa0882830 | MtrunA17_Chr7g0248361 | 39.224 | 232 | 130 | 6 | 505 | 728 | 192 | 420 | 7.80e-38 | 150 |
Msa0882830 | MtrunA17_Chr5g0432631 | 39.344 | 244 | 137 | 7 | 491 | 729 | 215 | 452 | 1.36e-37 | 151 |
Msa0882830 | MtrunA17_Chr4g0052411 | 41.333 | 225 | 124 | 6 | 504 | 723 | 228 | 449 | 1.96e-37 | 150 |
Msa0882830 | MtrunA17_Chr1g0182711 | 36.522 | 230 | 137 | 5 | 506 | 729 | 189 | 415 | 3.10e-37 | 145 |
Msa0882830 | MtrunA17_Chr8g0345461 | 37.118 | 229 | 137 | 4 | 505 | 728 | 165 | 391 | 3.12e-37 | 145 |
Msa0882830 | MtrunA17_Chr7g0262801 | 36.522 | 230 | 137 | 5 | 506 | 729 | 188 | 414 | 4.16e-37 | 145 |
Msa0882830 | MtrunA17_Chr4g0033451 | 39.749 | 239 | 130 | 6 | 505 | 733 | 380 | 614 | 1.52e-36 | 149 |
Msa0882830 | MtrunA17_Chr2g0297281 | 41.333 | 225 | 124 | 6 | 504 | 723 | 285 | 506 | 2.07e-36 | 147 |
Msa0882830 | MtrunA17_Chr1g0204051 | 78.667 | 75 | 16 | 0 | 634 | 708 | 1 | 75 | 2.24e-36 | 131 |
Msa0882830 | MtrunA17_Chr6g0456351 | 37.903 | 248 | 141 | 6 | 505 | 743 | 317 | 560 | 1.16e-35 | 143 |
Msa0882830 | MtrunA17_Chr1g0192151 | 34.802 | 227 | 141 | 4 | 507 | 728 | 169 | 393 | 1.37e-35 | 140 |
Msa0882830 | MtrunA17_Chr4g0014731 | 34.802 | 227 | 141 | 4 | 507 | 728 | 170 | 394 | 1.46e-35 | 140 |
Msa0882830 | MtrunA17_Chr2g0277831 | 36.364 | 220 | 130 | 6 | 505 | 718 | 533 | 748 | 3.13e-35 | 144 |
Msa0882830 | MtrunA17_Chr2g0277831 | 34.603 | 315 | 176 | 10 | 504 | 804 | 242 | 540 | 4.99e-35 | 143 |
Msa0882830 | MtrunA17_Chr3g0094871 | 36.797 | 231 | 136 | 5 | 505 | 728 | 11 | 238 | 3.21e-35 | 139 |
Msa0882830 | MtrunA17_Chr1g0200081 | 37.118 | 229 | 136 | 5 | 505 | 728 | 175 | 400 | 3.64e-35 | 139 |
Msa0882830 | MtrunA17_Chr1g0158881 | 38.760 | 258 | 145 | 8 | 491 | 743 | 316 | 565 | 4.26e-35 | 143 |
Msa0882830 | MtrunA17_Chr3g0108321 | 41.176 | 187 | 104 | 3 | 505 | 687 | 159 | 343 | 4.67e-35 | 137 |
Msa0882830 | MtrunA17_Chr2g0327231 | 41.718 | 163 | 91 | 3 | 505 | 665 | 346 | 506 | 5.12e-34 | 137 |
Msa0882830 | MtrunA17_Chr2g0327231 | 44.444 | 90 | 46 | 1 | 505 | 594 | 153 | 238 | 9.74e-15 | 77.8 |
Msa0882830 | MtrunA17_Chr7g0260601 | 37.069 | 232 | 135 | 6 | 505 | 728 | 240 | 468 | 5.17e-34 | 139 |
Msa0882830 | MtrunA17_Chr3g0086411 | 33.191 | 235 | 133 | 5 | 505 | 718 | 215 | 446 | 5.28e-34 | 137 |
Msa0882830 | MtrunA17_Chr3g0086411 | 27.273 | 220 | 144 | 5 | 593 | 802 | 7 | 220 | 4.43e-13 | 72.8 |
Msa0882830 | MtrunA17_Chr6g0476861 | 35.776 | 232 | 138 | 5 | 505 | 728 | 197 | 425 | 9.11e-34 | 138 |
Msa0882830 | MtrunA17_Chr4g0031821 | 36.207 | 232 | 137 | 6 | 505 | 728 | 320 | 548 | 1.48e-33 | 138 |
Msa0882830 | MtrunA17_Chr5g0432641 | 39.331 | 239 | 134 | 7 | 496 | 729 | 182 | 414 | 1.72e-33 | 137 |
Msa0882830 | MtrunA17_Chr4g0043381 | 35.965 | 228 | 136 | 5 | 509 | 731 | 841 | 1063 | 1.80e-32 | 135 |
Msa0882830 | MtrunA17_Chr3g0086401 | 35.565 | 239 | 124 | 7 | 505 | 718 | 385 | 618 | 9.51e-32 | 132 |
Msa0882830 | MtrunA17_Chr3g0086401 | 35.410 | 305 | 170 | 11 | 500 | 790 | 87 | 378 | 5.38e-30 | 126 |
Msa0882830 | MtrunA17_Chr3g0129971 | 35.379 | 277 | 161 | 8 | 494 | 755 | 284 | 557 | 3.64e-31 | 131 |
Msa0882830 | MtrunA17_Chr7g0255691 | 37.069 | 232 | 139 | 4 | 505 | 731 | 286 | 515 | 3.84e-30 | 126 |
Msa0882830 | MtrunA17_Chr7g0255691 | 30.822 | 292 | 165 | 7 | 520 | 804 | 32 | 293 | 5.64e-27 | 116 |
Msa0882830 | MtrunA17_Chr2g0289231 | 31.707 | 246 | 154 | 6 | 505 | 741 | 297 | 537 | 4.03e-30 | 126 |
Msa0882830 | MtrunA17_Chr2g0331161 | 34.764 | 233 | 142 | 7 | 503 | 729 | 413 | 641 | 7.35e-30 | 127 |
Msa0882830 | MtrunA17_Chr8g0388371 | 35.146 | 239 | 139 | 5 | 504 | 729 | 403 | 638 | 2.92e-29 | 125 |
Msa0882830 | MtrunA17_Chr2g0316851 | 31.174 | 247 | 150 | 7 | 507 | 737 | 596 | 838 | 1.66e-28 | 123 |
Msa0882830 | MtrunA17_Chr8g0357301 | 32.364 | 275 | 155 | 10 | 497 | 749 | 459 | 724 | 4.79e-27 | 118 |
Msa0882830 | MtrunA17_Chr3g0135781 | 40.000 | 170 | 94 | 5 | 499 | 666 | 49 | 212 | 3.13e-26 | 107 |
Msa0882830 | MtrunA17_Chr4g0047411 | 32.444 | 225 | 126 | 8 | 539 | 742 | 210 | 429 | 2.79e-19 | 93.2 |
Msa0882830 | MtrunA17_Chr1g0168321 | 36.129 | 155 | 89 | 5 | 582 | 728 | 203 | 355 | 3.33e-19 | 92.0 |
Msa0882830 | MtrunA17_Chr1g0190401 | 30.224 | 268 | 154 | 10 | 473 | 725 | 657 | 906 | 9.34e-19 | 92.0 |
Msa0882830 | MtrunA17_Chr4g0062081 | 46.988 | 83 | 43 | 1 | 504 | 585 | 6 | 88 | 8.74e-17 | 76.6 |
Msa0882830 | MtrunA17_Chr6g0450161 | 28.846 | 208 | 115 | 6 | 541 | 721 | 362 | 563 | 4.94e-15 | 79.3 |
Msa0882830 | MtrunA17_Chr5g0432391 | 34.302 | 172 | 103 | 6 | 584 | 749 | 82 | 249 | 7.13e-15 | 77.8 |
Msa0882830 | MtrunA17_Chr4g0039781 | 29.187 | 209 | 114 | 6 | 541 | 721 | 368 | 570 | 1.08e-14 | 78.2 |
Msa0882830 | MtrunA17_Chr5g0404291 | 29.902 | 204 | 111 | 6 | 541 | 718 | 387 | 584 | 6.92e-14 | 75.5 |
Msa0882830 | MtrunA17_Chr3g0116941 | 30.909 | 165 | 95 | 4 | 543 | 690 | 197 | 359 | 2.62e-13 | 73.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0882830 | AT4G28000.2 | 69.607 | 839 | 227 | 10 | 1 | 818 | 1 | 832 | 0.0 | 1127 |
Msa0882830 | AT4G28000.1 | 69.654 | 837 | 228 | 10 | 1 | 818 | 1 | 830 | 0.0 | 1125 |
Msa0882830 | AT5G52882.1 | 70.048 | 838 | 222 | 11 | 1 | 818 | 1 | 829 | 0.0 | 1111 |
Msa0882830 | AT1G64110.5 | 67.223 | 839 | 242 | 11 | 1 | 818 | 1 | 827 | 0.0 | 1089 |
Msa0882830 | AT1G64110.3 | 67.223 | 839 | 242 | 11 | 1 | 818 | 1 | 827 | 0.0 | 1089 |
Msa0882830 | AT1G64110.2 | 67.104 | 839 | 245 | 11 | 1 | 818 | 1 | 829 | 0.0 | 1087 |
Msa0882830 | AT1G64110.4 | 67.104 | 839 | 245 | 11 | 1 | 818 | 1 | 829 | 0.0 | 1087 |
Msa0882830 | AT1G64110.1 | 67.034 | 816 | 238 | 11 | 24 | 818 | 19 | 824 | 0.0 | 1084 |
Msa0882830 | AT4G28000.3 | 69.116 | 803 | 220 | 10 | 1 | 782 | 1 | 796 | 0.0 | 1064 |
Msa0882830 | AT1G02890.1 | 44.051 | 622 | 252 | 10 | 238 | 818 | 680 | 1246 | 3.80e-163 | 507 |
Msa0882830 | AT1G02890.1 | 38.462 | 91 | 53 | 2 | 49 | 136 | 422 | 512 | 9.47e-12 | 69.7 |
Msa0882830 | AT4G02480.1 | 44.444 | 621 | 250 | 11 | 238 | 818 | 700 | 1265 | 1.68e-158 | 495 |
Msa0882830 | AT4G02480.1 | 41.489 | 94 | 46 | 3 | 49 | 136 | 444 | 534 | 9.96e-13 | 72.8 |
Msa0882830 | AT1G02890.2 | 40.997 | 622 | 243 | 11 | 238 | 818 | 680 | 1218 | 1.34e-140 | 446 |
Msa0882830 | AT1G02890.2 | 38.462 | 91 | 53 | 2 | 49 | 136 | 422 | 512 | 9.33e-12 | 69.7 |
Msa0882830 | AT4G24860.4 | 42.308 | 598 | 266 | 9 | 239 | 817 | 557 | 1094 | 2.50e-139 | 440 |
Msa0882830 | AT4G24860.4 | 45.556 | 90 | 47 | 1 | 49 | 136 | 299 | 388 | 1.56e-15 | 81.6 |
Msa0882830 | AT4G24860.2 | 42.308 | 598 | 266 | 9 | 239 | 817 | 580 | 1117 | 4.10e-139 | 440 |
Msa0882830 | AT4G24860.2 | 45.556 | 90 | 47 | 1 | 49 | 136 | 299 | 388 | 1.84e-15 | 81.6 |
Msa0882830 | AT4G24860.1 | 42.308 | 598 | 266 | 9 | 239 | 817 | 584 | 1121 | 7.69e-139 | 439 |
Msa0882830 | AT4G24860.1 | 45.556 | 90 | 47 | 1 | 49 | 136 | 290 | 379 | 1.92e-15 | 81.6 |
Msa0882830 | AT4G24860.3 | 42.785 | 596 | 264 | 10 | 239 | 817 | 584 | 1119 | 8.72e-139 | 439 |
Msa0882830 | AT4G24860.3 | 45.556 | 90 | 47 | 1 | 49 | 136 | 290 | 379 | 1.88e-15 | 81.6 |
Msa0882830 | AT3G19740.1 | 41.487 | 511 | 230 | 7 | 308 | 816 | 550 | 993 | 2.13e-120 | 387 |
Msa0882830 | AT1G50140.3 | 41.142 | 508 | 230 | 6 | 311 | 816 | 563 | 1003 | 1.71e-116 | 377 |
Msa0882830 | AT1G50140.1 | 41.142 | 508 | 230 | 6 | 311 | 816 | 563 | 1003 | 1.71e-116 | 377 |
Msa0882830 | AT1G50140.4 | 41.142 | 508 | 230 | 6 | 311 | 816 | 563 | 1003 | 1.71e-116 | 377 |
Msa0882830 | AT1G50140.2 | 41.142 | 508 | 230 | 6 | 311 | 816 | 541 | 981 | 1.74e-116 | 377 |
Msa0882830 | AT1G50140.5 | 41.142 | 508 | 230 | 6 | 311 | 816 | 541 | 981 | 1.74e-116 | 377 |
Msa0882830 | AT1G62130.2 | 38.356 | 584 | 276 | 12 | 239 | 818 | 533 | 1036 | 6.12e-115 | 374 |
Msa0882830 | AT1G62130.2 | 43.478 | 92 | 48 | 2 | 49 | 136 | 298 | 389 | 1.43e-14 | 78.6 |
Msa0882830 | AT1G62130.1 | 38.356 | 584 | 276 | 12 | 239 | 818 | 540 | 1043 | 8.26e-115 | 374 |
Msa0882830 | AT1G62130.1 | 43.478 | 92 | 48 | 2 | 49 | 136 | 298 | 389 | 1.47e-14 | 78.6 |
Msa0882830 | AT4G27680.1 | 52.157 | 255 | 119 | 3 | 484 | 736 | 60 | 313 | 8.60e-82 | 268 |
Msa0882830 | AT5G53540.1 | 51.190 | 252 | 120 | 3 | 487 | 736 | 66 | 316 | 9.40e-80 | 263 |
Msa0882830 | AT2G45500.4 | 43.561 | 264 | 142 | 5 | 471 | 730 | 45 | 305 | 1.21e-66 | 226 |
Msa0882830 | AT2G45500.3 | 43.561 | 264 | 142 | 5 | 471 | 730 | 45 | 305 | 1.21e-66 | 226 |
Msa0882830 | AT2G45500.1 | 43.561 | 264 | 142 | 5 | 471 | 730 | 182 | 442 | 2.36e-65 | 226 |
Msa0882830 | AT2G45500.2 | 43.561 | 264 | 142 | 5 | 471 | 730 | 178 | 438 | 2.82e-65 | 226 |
Msa0882830 | AT2G45500.5 | 43.561 | 264 | 142 | 5 | 471 | 730 | 188 | 448 | 3.58e-65 | 226 |
Msa0882830 | AT3G27120.1 | 40.240 | 333 | 160 | 9 | 485 | 804 | 370 | 676 | 2.18e-64 | 229 |
Msa0882830 | AT1G80350.1 | 37.690 | 329 | 176 | 7 | 483 | 804 | 215 | 521 | 1.58e-62 | 219 |
Msa0882830 | AT2G34560.1 | 47.137 | 227 | 115 | 4 | 505 | 728 | 100 | 324 | 1.50e-58 | 204 |
Msa0882830 | AT2G34560.2 | 47.137 | 227 | 115 | 4 | 505 | 728 | 109 | 333 | 2.01e-58 | 204 |
Msa0882830 | AT2G27600.1 | 46.053 | 228 | 117 | 4 | 505 | 729 | 129 | 353 | 5.54e-57 | 202 |
Msa0882830 | AT3G53230.1 | 38.956 | 249 | 141 | 6 | 505 | 748 | 478 | 720 | 1.66e-47 | 182 |
Msa0882830 | AT3G53230.1 | 39.300 | 257 | 147 | 5 | 505 | 758 | 205 | 455 | 4.13e-45 | 174 |
Msa0882830 | AT5G03340.1 | 34.314 | 306 | 186 | 7 | 505 | 804 | 477 | 773 | 1.94e-45 | 176 |
Msa0882830 | AT5G03340.1 | 39.689 | 257 | 146 | 5 | 505 | 758 | 204 | 454 | 5.12e-45 | 174 |
Msa0882830 | AT3G09840.1 | 34.967 | 306 | 184 | 7 | 505 | 804 | 477 | 773 | 1.95e-45 | 176 |
Msa0882830 | AT3G09840.1 | 39.300 | 257 | 147 | 5 | 505 | 758 | 204 | 454 | 1.17e-44 | 173 |
Msa0882830 | AT2G26140.1 | 43.404 | 235 | 122 | 7 | 496 | 725 | 215 | 443 | 4.33e-42 | 164 |
Msa0882830 | AT1G45000.1 | 36.861 | 274 | 156 | 9 | 499 | 762 | 133 | 399 | 5.87e-42 | 158 |
Msa0882830 | AT5G43010.1 | 36.765 | 272 | 159 | 8 | 499 | 762 | 133 | 399 | 7.04e-42 | 158 |
Msa0882830 | AT3G56690.1 | 36.496 | 274 | 160 | 7 | 471 | 735 | 685 | 953 | 3.79e-41 | 163 |
Msa0882830 | AT3G56690.1 | 35.176 | 199 | 122 | 4 | 539 | 733 | 415 | 610 | 5.60e-32 | 134 |
Msa0882830 | AT3G01610.2 | 34.076 | 314 | 184 | 7 | 504 | 804 | 229 | 532 | 9.59e-41 | 161 |
Msa0882830 | AT3G01610.2 | 36.555 | 238 | 143 | 5 | 505 | 738 | 525 | 758 | 3.66e-33 | 137 |
Msa0882830 | AT3G01610.1 | 34.076 | 314 | 184 | 7 | 504 | 804 | 229 | 532 | 1.26e-40 | 161 |
Msa0882830 | AT3G01610.1 | 36.555 | 238 | 143 | 5 | 505 | 738 | 525 | 758 | 4.59e-33 | 137 |
Msa0882830 | AT5G42270.1 | 39.357 | 249 | 139 | 7 | 502 | 741 | 244 | 489 | 1.26e-39 | 157 |
Msa0882830 | AT1G50250.1 | 39.357 | 249 | 139 | 7 | 502 | 741 | 256 | 501 | 2.10e-39 | 156 |
Msa0882830 | AT3G47060.1 | 41.410 | 227 | 122 | 5 | 505 | 723 | 322 | 545 | 1.23e-38 | 155 |
Msa0882830 | AT5G58290.1 | 36.522 | 230 | 139 | 4 | 505 | 729 | 152 | 379 | 3.35e-38 | 148 |
Msa0882830 | AT2G30950.1 | 40.083 | 242 | 137 | 6 | 504 | 740 | 223 | 461 | 4.98e-38 | 152 |
Msa0882830 | AT2G30950.2 | 40.083 | 242 | 137 | 6 | 504 | 740 | 223 | 461 | 4.98e-38 | 152 |
Msa0882830 | AT2G30950.3 | 40.083 | 242 | 137 | 6 | 504 | 740 | 223 | 461 | 4.98e-38 | 152 |
Msa0882830 | AT2G30950.4 | 40.083 | 242 | 137 | 6 | 504 | 740 | 227 | 465 | 5.41e-38 | 152 |
Msa0882830 | AT5G19990.1 | 38.095 | 231 | 133 | 6 | 506 | 729 | 159 | 386 | 8.57e-38 | 147 |
Msa0882830 | AT5G19990.3 | 38.095 | 231 | 133 | 6 | 506 | 729 | 159 | 386 | 8.57e-38 | 147 |
Msa0882830 | AT5G19990.2 | 38.095 | 231 | 133 | 6 | 506 | 729 | 101 | 328 | 9.37e-38 | 145 |
Msa0882830 | AT5G20000.1 | 38.095 | 231 | 133 | 6 | 506 | 729 | 159 | 386 | 9.69e-38 | 147 |
Msa0882830 | AT4G29040.1 | 36.614 | 254 | 145 | 7 | 506 | 746 | 186 | 436 | 1.81e-37 | 146 |
Msa0882830 | AT5G15250.1 | 41.333 | 225 | 124 | 6 | 504 | 723 | 220 | 441 | 1.84e-37 | 150 |
Msa0882830 | AT1G03000.1 | 35.060 | 251 | 155 | 7 | 505 | 749 | 655 | 903 | 2.24e-37 | 151 |
Msa0882830 | AT2G20140.1 | 36.957 | 230 | 136 | 5 | 506 | 729 | 186 | 412 | 2.47e-37 | 146 |
Msa0882830 | AT1G06430.1 | 41.333 | 225 | 124 | 6 | 504 | 723 | 216 | 437 | 4.25e-37 | 149 |
Msa0882830 | AT1G06430.3 | 41.333 | 225 | 124 | 6 | 504 | 723 | 216 | 437 | 4.25e-37 | 149 |
Msa0882830 | AT1G06430.2 | 41.333 | 225 | 124 | 6 | 504 | 723 | 216 | 437 | 4.25e-37 | 149 |
Msa0882830 | AT5G58870.1 | 40.529 | 227 | 124 | 5 | 505 | 723 | 326 | 549 | 4.44e-37 | 150 |
Msa0882830 | AT1G53750.1 | 37.118 | 229 | 137 | 4 | 505 | 728 | 165 | 391 | 6.58e-37 | 144 |
Msa0882830 | AT3G05530.1 | 35.683 | 227 | 139 | 4 | 507 | 728 | 170 | 394 | 3.81e-36 | 142 |
Msa0882830 | AT5G53170.1 | 39.147 | 258 | 144 | 8 | 491 | 743 | 346 | 595 | 6.12e-36 | 146 |
Msa0882830 | AT1G53780.1 | 37.333 | 225 | 130 | 5 | 506 | 723 | 338 | 558 | 3.87e-35 | 142 |
Msa0882830 | AT1G53780.4 | 37.333 | 225 | 130 | 5 | 506 | 723 | 338 | 558 | 3.87e-35 | 142 |
Msa0882830 | AT1G53780.3 | 37.333 | 225 | 130 | 5 | 506 | 723 | 337 | 557 | 4.09e-35 | 142 |
Msa0882830 | AT1G53780.2 | 37.333 | 225 | 130 | 5 | 506 | 723 | 359 | 579 | 4.63e-35 | 142 |
Msa0882830 | AT1G05910.1 | 38.655 | 238 | 134 | 6 | 505 | 733 | 378 | 612 | 8.45e-35 | 144 |
Msa0882830 | AT1G09100.1 | 35.088 | 228 | 139 | 5 | 507 | 728 | 169 | 393 | 2.70e-34 | 137 |
Msa0882830 | AT5G08470.1 | 35.865 | 237 | 142 | 5 | 507 | 738 | 843 | 1074 | 3.54e-34 | 141 |
Msa0882830 | AT5G08470.3 | 35.865 | 237 | 142 | 5 | 507 | 738 | 834 | 1065 | 3.80e-34 | 141 |
Msa0882830 | AT3G02450.1 | 36.328 | 256 | 153 | 6 | 505 | 754 | 331 | 582 | 6.48e-34 | 139 |
Msa0882830 | AT5G15250.2 | 37.500 | 248 | 124 | 7 | 504 | 723 | 220 | 464 | 7.77e-34 | 137 |
Msa0882830 | AT2G29080.1 | 37.611 | 226 | 131 | 6 | 505 | 723 | 319 | 541 | 1.71e-33 | 139 |
Msa0882830 | AT1G07510.1 | 36.564 | 227 | 133 | 6 | 505 | 723 | 324 | 547 | 2.29e-33 | 138 |
Msa0882830 | AT4G23940.1 | 37.238 | 239 | 134 | 5 | 504 | 729 | 426 | 661 | 2.90e-32 | 135 |
Msa0882830 | AT5G64580.1 | 35.018 | 277 | 162 | 8 | 494 | 755 | 301 | 574 | 9.11e-31 | 130 |
Msa0882830 | AT3G16290.1 | 35.193 | 233 | 141 | 7 | 503 | 729 | 405 | 633 | 2.75e-30 | 129 |
Msa0882830 | AT4G04180.1 | 32.389 | 247 | 153 | 6 | 505 | 742 | 316 | 557 | 5.66e-30 | 126 |
Msa0882830 | AT4G04180.2 | 32.389 | 247 | 153 | 6 | 505 | 742 | 311 | 552 | 5.76e-30 | 126 |
Msa0882830 | AT3G15120.2 | 33.603 | 247 | 145 | 8 | 492 | 723 | 708 | 950 | 1.43e-28 | 124 |
Msa0882830 | AT3G15120.1 | 33.603 | 247 | 145 | 8 | 492 | 723 | 698 | 940 | 1.54e-28 | 124 |
Msa0882830 | AT2G03670.1 | 36.975 | 238 | 132 | 5 | 505 | 731 | 283 | 513 | 4.90e-28 | 120 |
Msa0882830 | AT2G03670.1 | 33.333 | 246 | 150 | 6 | 498 | 731 | 12 | 255 | 1.07e-25 | 113 |
Msa0882830 | AT2G03670.2 | 33.333 | 246 | 150 | 6 | 498 | 731 | 12 | 255 | 1.76e-26 | 113 |
Msa0882830 | AT2G03670.2 | 38.889 | 144 | 75 | 2 | 505 | 640 | 283 | 421 | 7.13e-16 | 81.3 |
Msa0882830 | AT1G45000.2 | 41.096 | 146 | 77 | 5 | 499 | 640 | 133 | 273 | 7.04e-25 | 107 |
Msa0882830 | AT1G79560.2 | 34.466 | 206 | 106 | 7 | 542 | 729 | 526 | 720 | 1.44e-24 | 110 |
Msa0882830 | AT1G79560.3 | 34.466 | 206 | 106 | 7 | 542 | 729 | 526 | 720 | 1.47e-24 | 110 |
Msa0882830 | AT1G79560.1 | 34.466 | 206 | 106 | 7 | 542 | 729 | 526 | 720 | 1.55e-24 | 110 |
Msa0882830 | AT4G04910.1 | 33.778 | 225 | 123 | 9 | 539 | 742 | 247 | 466 | 4.63e-20 | 95.9 |
Msa0882830 | AT5G08470.2 | 34.667 | 150 | 91 | 3 | 507 | 654 | 843 | 987 | 2.23e-19 | 94.4 |
Msa0882830 | AT3G04340.1 | 29.412 | 238 | 143 | 8 | 491 | 716 | 774 | 998 | 1.22e-16 | 85.5 |
Msa0882830 | AT5G16930.1 | 29.224 | 219 | 101 | 7 | 541 | 721 | 397 | 599 | 7.19e-15 | 79.3 |
Msa0882830 | AT3G03060.1 | 28.440 | 218 | 104 | 6 | 541 | 721 | 385 | 587 | 3.98e-14 | 76.6 |
Msa0882830 | AT2G18330.1 | 27.700 | 213 | 114 | 6 | 541 | 719 | 384 | 590 | 2.21e-13 | 74.3 |
Msa0882830 | AT4G36580.1 | 31.250 | 144 | 91 | 4 | 541 | 682 | 381 | 518 | 1.65e-11 | 68.6 |
Find 173 sgRNAs with CRISPR-Local
Find 359 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTAGCATTTCACACTCTTAA+AGG | 0.163337 | 6_1:+32519541 | None:intergenic |
GATTCCCTCCAACCCATTTC+TGG | 0.189501 | 6_1:+32525038 | None:intergenic |
CGCGATATCGATGAGGTTTC+TGG | 0.190695 | 6_1:-32525016 | Msa0882830:CDS |
GTGAAATGCTAATTTCATTT+TGG | 0.199307 | 6_1:-32519530 | Msa0882830:three_prime_UTR |
CTGTTTCTGGAGGGTCTTAA+AGG | 0.201924 | 6_1:-32525166 | Msa0882830:five_prime_UTR |
TTCATGTCTTCCATGCTTAA+AGG | 0.218963 | 6_1:+32520014 | None:intergenic |
AAAGGCCTCAAGATAATTTC+TGG | 0.223878 | 6_1:+32520032 | None:intergenic |
ACTTTGATCTCGATGTTATA+AGG | 0.250995 | 6_1:+32522527 | None:intergenic |
ATTGTTCCAGAAAATGATTC+TGG | 0.257437 | 6_1:+32525216 | None:intergenic |
TTCCACTACTCTTGCCTTCC+TGG | 0.264777 | 6_1:+32522120 | None:intergenic |
GGAACAATTCTTATACCTTT+TGG | 0.265596 | 6_1:-32525201 | Msa0882830:five_prime_UTR |
AGAACAAGAATTTGTTCATT+AGG | 0.265912 | 6_1:+32521141 | None:intergenic |
GTGCAGTTGCAAAGCAGATT+TGG | 0.314917 | 6_1:-32523391 | Msa0882830:intron |
CATTGGGATGGACTATTATC+TGG | 0.315982 | 6_1:-32521165 | Msa0882830:CDS |
TTACAACATATCTAAAGTTT+TGG | 0.319613 | 6_1:+32519281 | None:intergenic |
CTCAAGAGACTTGTTGTTGA+TGG | 0.320621 | 6_1:-32524974 | Msa0882830:CDS |
CGCTTCTCGAACTCGTTGTC+CGG | 0.334969 | 6_1:+32521618 | None:intergenic |
AGAATATGATTGCAAAGAAT+TGG | 0.337719 | 6_1:-32522573 | Msa0882830:CDS |
TCAGGGATTGAGTCTGTTCC+AGG | 0.345579 | 6_1:-32522138 | Msa0882830:CDS |
TACATGCTTGCAGGAAGTTC+CGG | 0.349913 | 6_1:-32521637 | Msa0882830:intron |
TATTGTGTCATGTGAGGTTT+TGG | 0.351413 | 6_1:-32519343 | Msa0882830:three_prime_UTR |
TTGAGTGTTGGTGTTGGATT+AGG | 0.352827 | 6_1:-32525094 | Msa0882830:CDS |
CCGCGGCTTATCGACCTGTT+AGG | 0.364530 | 6_1:-32520249 | Msa0882830:CDS |
CGTTACAGGGATAGATTTCT+CGG | 0.365008 | 6_1:+32521763 | None:intergenic |
CTGGACAAGCTGTCCAGAAA+TGG | 0.368219 | 6_1:-32525051 | Msa0882830:CDS |
GTTGGACTTGGATTGAGTTC+TGG | 0.368529 | 6_1:-32525070 | Msa0882830:CDS |
GTAACACCTATCTCATTTGC+AGG | 0.369133 | 6_1:+32521576 | None:intergenic |
CCGAGATGAGTTTCATCTTC+GGG | 0.378569 | 6_1:+32522503 | None:intergenic |
CCAAAGATATAAAAGCTAAG+AGG | 0.379290 | 6_1:-32519427 | Msa0882830:three_prime_UTR |
CTGGATTTGTTGAACCACTT+TGG | 0.383287 | 6_1:+32523041 | None:intergenic |
TATATCTTTGGAACACTTGA+AGG | 0.383455 | 6_1:+32519439 | None:intergenic |
TTTGTTGAAATATACCCTTT+AGG | 0.383667 | 6_1:+32519492 | None:intergenic |
CTTTGATCTCGATGTTATAA+GGG | 0.386195 | 6_1:+32522528 | None:intergenic |
TAGTTGAACTTGTTATAGTT+TGG | 0.390380 | 6_1:-32519208 | Msa0882830:three_prime_UTR |
ACACGAAAACTTGGACTTCA+AGG | 0.392924 | 6_1:-32520408 | Msa0882830:CDS |
TGGATTTGTTGAACCACTTT+GGG | 0.393600 | 6_1:+32523042 | None:intergenic |
CAATGTGGACAGTTTGTCTC+AGG | 0.398322 | 6_1:-32522156 | Msa0882830:intron |
GAAGTAATGTGCTAAAGCTT+TGG | 0.401980 | 6_1:+32523551 | None:intergenic |
TGCTGTATTAACTCCCTAAC+AGG | 0.402030 | 6_1:+32520235 | None:intergenic |
AGAATGATAAATAAACTATC+AGG | 0.409583 | 6_1:-32522632 | Msa0882830:CDS |
GTTATTATTTGAAGCATCTT+CGG | 0.409808 | 6_1:+32520067 | None:intergenic |
TGTCCACCATCACTTCAAAA+TGG | 0.416441 | 6_1:-32521347 | Msa0882830:CDS |
CTTTGTACAGTCACTTTACA+AGG | 0.423608 | 6_1:-32522835 | Msa0882830:intron |
TTACCATTTGATGACTACTA+AGG | 0.424622 | 6_1:-32522300 | Msa0882830:CDS |
ATGACTTTGGAACGAATGTC+TGG | 0.424693 | 6_1:-32523205 | Msa0882830:CDS |
CGAATAATCCTCCAAGGCTT+CGG | 0.427521 | 6_1:-32523105 | Msa0882830:CDS |
GAACGAATGTCTGGTTTGTT+TGG | 0.429036 | 6_1:-32523196 | Msa0882830:CDS |
TTTAATGTTGAGTAGGATCA+TGG | 0.429495 | 6_1:-32520492 | Msa0882830:intron |
GAAAATGTTGACGATATTGC+CGG | 0.435344 | 6_1:-32521839 | Msa0882830:CDS |
TCTTCCATCTGCTGAGAATA+GGG | 0.436797 | 6_1:-32520465 | Msa0882830:CDS |
AAATGAATTCATGACACATT+GGG | 0.437919 | 6_1:-32521181 | Msa0882830:CDS |
GTTGGATTAGGTGTTGGACT+TGG | 0.438941 | 6_1:-32525082 | Msa0882830:CDS |
TTTGACACCAACGTTGTCTT+CGG | 0.444265 | 6_1:-32525289 | Msa0882830:five_prime_UTR |
GTCTTCCATCTGCTGAGAAT+AGG | 0.445088 | 6_1:-32520466 | Msa0882830:CDS |
TGTACGGCGAAGGCGGTTCA+AGG | 0.446430 | 6_1:-32519587 | Msa0882830:CDS |
ATGAAACTCATCTCGGTAGC+TGG | 0.447734 | 6_1:-32522496 | Msa0882830:CDS |
CATGAAACAAGCTAAGAATC+AGG | 0.448416 | 6_1:-32519997 | Msa0882830:intron |
AGTAAAATAGCCCTGCTTGC+CGG | 0.457963 | 6_1:+32523711 | None:intergenic |
TTTGTCACATATATCCTAAA+GGG | 0.458879 | 6_1:-32519506 | Msa0882830:three_prime_UTR |
ACCGAGATGAGTTTCATCTT+CGG | 0.462511 | 6_1:+32522502 | None:intergenic |
ATCCCTTATGTATAAAATGA+TGG | 0.462540 | 6_1:+32522703 | None:intergenic |
ATGAGTTTCCTTATTACCTA+AGG | 0.463467 | 6_1:-32524928 | Msa0882830:intron |
TGCTTCATTCGCAATCGCCT+TGG | 0.464021 | 6_1:+32521395 | None:intergenic |
GTTATCCCTGCAAATGAGAT+AGG | 0.467844 | 6_1:-32521582 | Msa0882830:CDS |
TGAGAGGTTTCTTGTGTGCT+TGG | 0.469934 | 6_1:+32523734 | None:intergenic |
CCTCTAGTTTCACCGGTTGA+AGG | 0.476239 | 6_1:+32523157 | None:intergenic |
ATTAGTAATGGTGATTGTCA+TGG | 0.476973 | 6_1:-32519181 | Msa0882830:three_prime_UTR |
GAAACCTCTCACCGGCAAGC+AGG | 0.479995 | 6_1:-32523722 | Msa0882830:CDS |
ATTTGTCACATATATCCTAA+AGG | 0.480477 | 6_1:-32519507 | Msa0882830:three_prime_UTR |
ATCGCTTCATCAAGATCAAA+TGG | 0.480594 | 6_1:+32521102 | None:intergenic |
ATTCGCAGACATCGGTGCAT+TGG | 0.482826 | 6_1:-32521553 | Msa0882830:CDS |
GTTGGTGTTGGATTAGGTGT+TGG | 0.483479 | 6_1:-32525088 | Msa0882830:CDS |
TGAAGAGGTCTGGTCTCCTA+AGG | 0.485467 | 6_1:+32521490 | None:intergenic |
CAAAGTGGTTCAACAAATCC+AGG | 0.486761 | 6_1:-32523040 | Msa0882830:intron |
CGCGGCTTATCGACCTGTTA+GGG | 0.486783 | 6_1:-32520248 | Msa0882830:CDS |
AACTAGTTATCTCATCCAAT+AGG | 0.487374 | 6_1:-32522256 | Msa0882830:intron |
GAGGCATTCCTCCGAAGCCT+TGG | 0.488205 | 6_1:+32523094 | None:intergenic |
TGTAGTAAATTAAATAACCT+TGG | 0.491357 | 6_1:+32522656 | None:intergenic |
ACCATCACTTCAAAATGGTT+CGG | 0.491372 | 6_1:-32521342 | Msa0882830:CDS |
TGGACAAGCTGTCCAGAAAT+GGG | 0.491969 | 6_1:-32525050 | Msa0882830:CDS |
GCATTCCTCCGAAGCCTTGG+AGG | 0.492073 | 6_1:+32523097 | None:intergenic |
GTCGATATCCGAGATGACTT+TGG | 0.495758 | 6_1:-32523218 | Msa0882830:CDS |
AAGGCGATTGCGAATGAAGC+AGG | 0.496258 | 6_1:-32521393 | Msa0882830:CDS |
GTTCCTTAGTAGTCATCAAA+TGG | 0.500837 | 6_1:+32522297 | None:intergenic |
AGCTAGTAATGCTTCCCCTT+AGG | 0.503492 | 6_1:-32521506 | Msa0882830:CDS |
AGTCCACCTTTGAAGAGGTC+TGG | 0.503700 | 6_1:+32521480 | None:intergenic |
TTTGTTCACGCTAGCAGCTA+AGG | 0.504388 | 6_1:-32521295 | Msa0882830:CDS |
AATATAGTTACTAAGTATCA+TGG | 0.507857 | 6_1:+32522349 | None:intergenic |
TTATACGACGGTTCGAGCGC+AGG | 0.512691 | 6_1:-32521080 | Msa0882830:intron |
ACCATGACAGAAGGATTTAG+TGG | 0.514138 | 6_1:-32520377 | Msa0882830:CDS |
CCTCACATCATTCTTTGCGC+CGG | 0.514346 | 6_1:+32521820 | None:intergenic |
GGTTGAAGGCGTCATTGAAA+AGG | 0.514365 | 6_1:+32523171 | None:intergenic |
CCTTAAAACTCTTATGTCAA+AGG | 0.516270 | 6_1:-32520435 | Msa0882830:CDS |
AAAATGAATTCATGACACAT+TGG | 0.516818 | 6_1:-32521182 | Msa0882830:CDS |
ATTTCCCTATTCTCAGCAGA+TGG | 0.517657 | 6_1:+32520461 | None:intergenic |
TCAGCATTGAGTGTTGGTGT+TGG | 0.519229 | 6_1:-32525100 | Msa0882830:CDS |
TAGTTTGGTTCAATTAGTAA+TGG | 0.522387 | 6_1:-32519193 | Msa0882830:three_prime_UTR |
TGTAGAGGTATATTACTCTT+CGG | 0.523785 | 6_1:-32521447 | Msa0882830:CDS |
CTCTTCGGTCCACCTGGTAC+CGG | 0.524265 | 6_1:-32521432 | Msa0882830:CDS |
ATTTAGTGGAAGTGATCTAA+AGG | 0.528579 | 6_1:-32520363 | Msa0882830:intron |
CAAAGATATAAAAGCTAAGA+GGG | 0.531100 | 6_1:-32519426 | Msa0882830:three_prime_UTR |
TATCTTGAGGCCTTTAAGCA+TGG | 0.532248 | 6_1:-32520024 | Msa0882830:CDS |
TGCATCAGAAGGTTCAGTAA+TGG | 0.535925 | 6_1:-32519634 | Msa0882830:CDS |
ATCAAGATCAAATGGTCTGT+TGG | 0.536190 | 6_1:+32521110 | None:intergenic |
TCCACTAAATCCTTCTGTCA+TGG | 0.536524 | 6_1:+32520376 | None:intergenic |
TCATTTGCAGGGATAACCTC+TGG | 0.541654 | 6_1:+32521588 | None:intergenic |
TTGCAAAGAATTGGACGAAA+GGG | 0.543308 | 6_1:-32522564 | Msa0882830:CDS |
ACTCATCTCGGTAGCTGGAA+AGG | 0.546433 | 6_1:-32522491 | Msa0882830:CDS |
TGTTACTGATTTCTCTGTGA+AGG | 0.546550 | 6_1:-32523505 | Msa0882830:intron |
CTGCTAGCGTGAACAAAGCT+CGG | 0.548824 | 6_1:+32521301 | None:intergenic |
AAACCTCTCACCGGCAAGCA+GGG | 0.550772 | 6_1:-32523721 | Msa0882830:CDS |
CATCAAATGGTAAGAAATTG+CGG | 0.550828 | 6_1:+32522310 | None:intergenic |
AGTAGCACTTCTTCCCAAAG+TGG | 0.551337 | 6_1:-32523055 | Msa0882830:CDS |
GAGAGTACCTCTAGTTTCAC+CGG | 0.552493 | 6_1:+32523150 | None:intergenic |
CAAGCTGTCCAGAAATGGGT+TGG | 0.554692 | 6_1:-32525046 | Msa0882830:CDS |
TAGCCCTGCTTGCCGGTGAG+AGG | 0.558044 | 6_1:+32523718 | None:intergenic |
GATGAAGTTGACAGCATGCT+CGG | 0.560044 | 6_1:-32521249 | Msa0882830:CDS |
GAAGAGGTCTGGTCTCCTAA+GGG | 0.560343 | 6_1:+32521491 | None:intergenic |
CTGTCCAGAAATGGGTTGGA+GGG | 0.561405 | 6_1:-32525042 | Msa0882830:CDS |
TTGTCATGGATTGCATCAAA+TGG | 0.571025 | 6_1:-32519167 | Msa0882830:three_prime_UTR |
TTCCAGGAAGGCAAGAGTAG+TGG | 0.572341 | 6_1:-32522122 | Msa0882830:CDS |
GCTGTCCAGAAATGGGTTGG+AGG | 0.574922 | 6_1:-32525043 | Msa0882830:CDS |
ATATCTTTGGAACACTTGAA+GGG | 0.575428 | 6_1:+32519440 | None:intergenic |
TGTTAGGGAGTTAATACAGC+AGG | 0.578490 | 6_1:-32520233 | Msa0882830:CDS |
TTAGAAGTCCACCTTTGAAG+AGG | 0.579176 | 6_1:+32521475 | None:intergenic |
ATATTACTCTTCGGTCCACC+TGG | 0.580870 | 6_1:-32521438 | Msa0882830:CDS |
CATTCGTTCCAAAGTCATCT+CGG | 0.581888 | 6_1:+32523210 | None:intergenic |
TAATAATCTTCTAATACAAG+TGG | 0.582592 | 6_1:+32519367 | None:intergenic |
GGGTATATTTCAACAAAGCA+AGG | 0.585307 | 6_1:-32519486 | Msa0882830:three_prime_UTR |
CTCGGTCAGCGTACTAGAGT+CGG | 0.585382 | 6_1:-32521231 | Msa0882830:CDS |
AAACAATGGAATGAATTGTA+CGG | 0.586269 | 6_1:-32519603 | Msa0882830:CDS |
AAGGAACCAGAATACCGAAA+CGG | 0.589801 | 6_1:-32522281 | Msa0882830:CDS |
TGGAATGAATTGTACGGCGA+AGG | 0.590358 | 6_1:-32519597 | Msa0882830:CDS |
TAATGGCTGAGCTAAAACAA+TGG | 0.592183 | 6_1:-32519617 | Msa0882830:CDS |
AATGAATTGTACGGCGAAGG+CGG | 0.593092 | 6_1:-32519594 | Msa0882830:CDS |
AATGTGGACAGTTTGTCTCA+GGG | 0.594638 | 6_1:-32522155 | Msa0882830:intron |
ATTGCAAAGAATTGGACGAA+AGG | 0.594966 | 6_1:-32522565 | Msa0882830:CDS |
AATTGGACGAAAGGGTCGCT+AGG | 0.595637 | 6_1:-32522556 | Msa0882830:CDS |
AAAGTTCGAATAATCCTCCA+AGG | 0.598370 | 6_1:-32523111 | Msa0882830:CDS |
TCAGGTTCAGTGTTGATACT+CGG | 0.599560 | 6_1:-32522614 | Msa0882830:CDS |
ATGTTGAGTAGGATCATGGT+TGG | 0.601596 | 6_1:-32520488 | Msa0882830:intron |
GAATTCATGACACATTGGGA+TGG | 0.601740 | 6_1:-32521177 | Msa0882830:CDS |
TACTAGAGTCGGAGAACATG+AGG | 0.602554 | 6_1:-32521220 | Msa0882830:CDS |
TATTAGTATTGTGTCATGTG+AGG | 0.603209 | 6_1:-32519349 | Msa0882830:three_prime_UTR |
ACTTAGATCAGACGCAGCAG+AGG | 0.607845 | 6_1:+32523075 | None:intergenic |
CCCGAAGATGAAACTCATCT+CGG | 0.613969 | 6_1:-32522503 | Msa0882830:CDS |
ATAATCCTCCAAGGCTTCGG+AGG | 0.618504 | 6_1:-32523102 | Msa0882830:CDS |
AGGAGACCAGACCTCTTCAA+AGG | 0.619937 | 6_1:-32521486 | Msa0882830:CDS |
CCGCGAGTACTTCAGCAATG+TGG | 0.624242 | 6_1:+32522420 | None:intergenic |
GGTGTTACATTCGCAGACAT+CGG | 0.629703 | 6_1:-32521561 | Msa0882830:CDS |
GAACTAGCAACCATGACAGA+AGG | 0.634509 | 6_1:-32520386 | Msa0882830:CDS |
TCGGAGAACATGAGGCCATG+AGG | 0.634732 | 6_1:-32521212 | Msa0882830:CDS |
TCATCGACGAATATAATAGT+CGG | 0.640660 | 6_1:+32521267 | None:intergenic |
AGACCAGACCTCTTCAAAGG+TGG | 0.645548 | 6_1:-32521483 | Msa0882830:CDS |
TAACACCTATCTCATTTGCA+GGG | 0.646749 | 6_1:+32521577 | None:intergenic |
CCTTCAACCGGTGAAACTAG+AGG | 0.647499 | 6_1:-32523157 | Msa0882830:CDS |
CCACATTGCTGAAGTACTCG+CGG | 0.647923 | 6_1:-32522420 | Msa0882830:CDS |
AAGAACCAGAAATTATCTTG+AGG | 0.649618 | 6_1:-32520037 | Msa0882830:CDS |
GGACTTCTAAAGCCATGTAG+AGG | 0.650465 | 6_1:-32521462 | Msa0882830:CDS |
CGAGAAGCGAATTAGACCAG+AGG | 0.653973 | 6_1:-32521604 | Msa0882830:CDS |
AAGAGGTCTGGTCTCCTAAG+GGG | 0.660614 | 6_1:+32521492 | None:intergenic |
GCACACAAGAAACCTCTCAC+CGG | 0.666148 | 6_1:-32523730 | Msa0882830:CDS |
AAGAGTAATATACCTCTACA+TGG | 0.666188 | 6_1:+32521450 | None:intergenic |
ACAGAATTTGTGCATAACCG+CGG | 0.668344 | 6_1:-32520266 | Msa0882830:intron |
GGATTGAGTCTGTTCCAGGA+AGG | 0.670020 | 6_1:-32522134 | Msa0882830:CDS |
GAAGACTAATGATTCTAACA+AGG | 0.670841 | 6_1:-32522093 | Msa0882830:intron |
AGCACCAGAAAATAAAAGTG+AGG | 0.671744 | 6_1:-32521786 | Msa0882830:CDS |
AGGGAATCGCGATATCGATG+AGG | 0.687029 | 6_1:-32525023 | Msa0882830:CDS |
AGCTTGTTCTAAAATCACCA+AGG | 0.690448 | 6_1:-32522673 | Msa0882830:CDS |
TTGATGAAGCGATTATACGA+CGG | 0.711157 | 6_1:-32521092 | Msa0882830:CDS |
CCGGCGCAAAGAATGATGTG+AGG | 0.713348 | 6_1:-32521820 | Msa0882830:CDS |
AAAGACTCCGAAGACAACGT+TGG | 0.719596 | 6_1:+32525282 | None:intergenic |
CCTAACAGGTCGATAAGCCG+CGG | 0.727018 | 6_1:+32520249 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TATTAAAAAAAAATTACCTT+AGG | + | chr6_1:32519498-32519517 | None:intergenic | 10.0% |
!!! | TTTGTTAATTATGAATTTTT+AGG | + | chr6_1:32523648-32523667 | None:intergenic | 10.0% |
!! | TGTTTATAAATTATATGCTT+CGG | + | chr6_1:32520169-32520188 | None:intergenic | 15.0% |
!!! | TTTTTTTTTTGTTTTGTAAC+CGG | - | chr6_1:32520938-32520957 | Msa0882830:intron | 15.0% |
!! | AAATAAAATAGTTTAAGTGA+AGG | - | chr6_1:32523535-32523554 | Msa0882830:CDS | 15.0% |
!! | AATAAAATAGTTTAAGTGAA+GGG | - | chr6_1:32523536-32523555 | Msa0882830:CDS | 15.0% |
!!! | ATAATAAAGATATCGATTTT+CGG | + | chr6_1:32523586-32523605 | None:intergenic | 15.0% |
!!! | TGAATTTTTAGGTTTTTTAA+TGG | + | chr6_1:32523637-32523656 | None:intergenic | 15.0% |
!! | ATTCTCAATAAAAAATTTGA+TGG | + | chr6_1:32523675-32523694 | None:intergenic | 15.0% |
!!! | ATAATTTTTTAATGTTGAGT+AGG | - | chr6_1:32523908-32523927 | Msa0882830:intron | 15.0% |
!! | CAAAAATAATACTAATTAAC+CGG | + | chr6_1:32524082-32524101 | None:intergenic | 15.0% |
!!! | ATGTATTTTCTCAATAATAA+CGG | + | chr6_1:32524504-32524523 | None:intergenic | 15.0% |
!!! | ACCAAATATTTTTGATGTTA+TGG | - | chr6_1:32519264-32519283 | Msa0882830:three_prime_UTR | 20.0% |
!! | TCCATAACATCAAAAATATT+TGG | + | chr6_1:32519268-32519287 | None:intergenic | 20.0% |
!! | AAAAATTACCTTAGGTAATA+AGG | + | chr6_1:32519490-32519509 | None:intergenic | 20.0% |
!! | TGTGTTAGTATATGATATAA+TGG | - | chr6_1:32519591-32519610 | Msa0882830:CDS | 20.0% |
!! | ATATGATATAATGGTGTTTA+TGG | - | chr6_1:32519600-32519619 | Msa0882830:CDS | 20.0% |
!! | ATGAAAATCTAAGAAAGATT+GGG | + | chr6_1:32519793-32519812 | None:intergenic | 20.0% |
!! | AATGAAAATCTAAGAAAGAT+TGG | + | chr6_1:32519794-32519813 | None:intergenic | 20.0% |
!! | AAGAATAGAAAATTGCAAAA+AGG | + | chr6_1:32520112-32520131 | None:intergenic | 20.0% |
!! | AGCATATAATTTATAAACAC+CGG | - | chr6_1:32520170-32520189 | Msa0882830:intron | 20.0% |
!! | ATTGAAAGCAAAAGAAAAAA+AGG | + | chr6_1:32520493-32520512 | None:intergenic | 20.0% |
!!! | TTTTCTTTTGCTTTCAATTT+AGG | - | chr6_1:32520495-32520514 | Msa0882830:intron | 20.0% |
!! | TATATGTATATGTATACAAC+CGG | + | chr6_1:32520960-32520979 | None:intergenic | 20.0% |
!!! | TATACTTTGAAAAAGAACAA+TGG | - | chr6_1:32521095-32521114 | Msa0882830:CDS | 20.0% |
!! | TATAGTTCAAAATTATAACC+TGG | + | chr6_1:32521388-32521407 | None:intergenic | 20.0% |
!!! | ATTCCATCATTTTATACATA+AGG | - | chr6_1:32521701-32521720 | Msa0882830:intron | 20.0% |
!!! | TTCCATCATTTTATACATAA+GGG | - | chr6_1:32521702-32521721 | Msa0882830:intron | 20.0% |
!! | TGTAGTAAATTAAATAACCT+TGG | + | chr6_1:32521754-32521773 | None:intergenic | 20.0% |
!! | AGAATGATAAATAAACTATC+AGG | - | chr6_1:32521775-32521794 | Msa0882830:CDS | 20.0% |
!! | AATATAGTTACTAAGTATCA+TGG | + | chr6_1:32522061-32522080 | None:intergenic | 20.0% |
!! | TCGATATCTTTATTATACAT+AGG | - | chr6_1:32523590-32523609 | Msa0882830:intron | 20.0% |
!! | GGATAAAGTATATAAATGTA+TGG | + | chr6_1:32523724-32523743 | None:intergenic | 20.0% |
!!! | TCTCTTCATTTTAAATTACT+TGG | - | chr6_1:32523820-32523839 | Msa0882830:intron | 20.0% |
!!! | CGGTTAATTAGTATTATTTT+TGG | - | chr6_1:32524080-32524099 | Msa0882830:intron | 20.0% |
!!! | CATTTAAGTGAATGATTTTT+GGG | + | chr6_1:32524444-32524463 | None:intergenic | 20.0% |
!!! | TCATTTAAGTGAATGATTTT+TGG | + | chr6_1:32524445-32524464 | None:intergenic | 20.0% |
!! | TAATAATCTTCTAATACAAG+TGG | + | chr6_1:32525043-32525062 | None:intergenic | 20.0% |
!!! | TTACAACATATCTAAAGTTT+TGG | + | chr6_1:32525129-32525148 | None:intergenic | 20.0% |
!!! | AAAAAAAAACTGTTTCTGGA+GGG | - | chr6_1:32519232-32519251 | Msa0882830:three_prime_UTR | 25.0% |
!! | ATGGTGTTTATGGTAATTTT+TGG | - | chr6_1:32519610-32519629 | Msa0882830:CDS | 25.0% |
!! | TGGTGTTTATGGTAATTTTT+GGG | - | chr6_1:32519611-32519630 | Msa0882830:CDS | 25.0% |
!!! | TTTTAATGATGTTTGAGACA+TGG | - | chr6_1:32519634-32519653 | Msa0882830:CDS | 25.0% |
!! | AATTTCATGTTCTGAATCTT+TGG | - | chr6_1:32519678-32519697 | Msa0882830:intron | 25.0% |
! | ATCTTTGGACATATAAATCT+TGG | - | chr6_1:32519693-32519712 | Msa0882830:intron | 25.0% |
! | TCTTTGGACATATAAATCTT+GGG | - | chr6_1:32519694-32519713 | Msa0882830:intron | 25.0% |
!! | GATGAATTTTCTTTGATTGT+TGG | - | chr6_1:32519739-32519758 | Msa0882830:intron | 25.0% |
!! | AATTTTCTTTGATTGTTGGT+TGG | - | chr6_1:32519743-32519762 | Msa0882830:intron | 25.0% |
! | TAATTACAGATGAATTGTTC+GGG | + | chr6_1:32519941-32519960 | None:intergenic | 25.0% |
! | CTAATTACAGATGAATTGTT+CGG | + | chr6_1:32519942-32519961 | None:intergenic | 25.0% |
!!! | TGGTTTCTTAGAGTTTTATT+TGG | - | chr6_1:32519988-32520007 | Msa0882830:intron | 25.0% |
!! | TTTTACAACTTCTATGAAGA+GGG | + | chr6_1:32520085-32520104 | None:intergenic | 25.0% |
!! | TTTTTACAACTTCTATGAAG+AGG | + | chr6_1:32520086-32520105 | None:intergenic | 25.0% |
! | TTCATATAATCTATCCAAGA+TGG | - | chr6_1:32520222-32520241 | Msa0882830:CDS | 25.0% |
! | ATATATTGTTTCCTAAACGA+TGG | - | chr6_1:32520537-32520556 | Msa0882830:intron | 25.0% |
!!! | TAATCACATGTTTTTTCATC+TGG | - | chr6_1:32520576-32520595 | Msa0882830:intron | 25.0% |
! | AAACAAGCATTAGTCAAAAA+AGG | + | chr6_1:32520799-32520818 | None:intergenic | 25.0% |
! | TTACCTTGTTAACCATATTT+AGG | - | chr6_1:32521410-32521429 | Msa0882830:CDS | 25.0% |
! | ATAAAAGTAGATCGATTGTT+CGG | + | chr6_1:32521445-32521464 | None:intergenic | 25.0% |
! | ATCCCTTATGTATAAAATGA+TGG | + | chr6_1:32521707-32521726 | None:intergenic | 25.0% |
! | AGAATATGATTGCAAAGAAT+TGG | - | chr6_1:32521834-32521853 | Msa0882830:CDS | 25.0% |
! | TTGTGAAGATATTTACCTAT+TGG | + | chr6_1:32522169-32522188 | None:intergenic | 25.0% |
! | AATGCAAACGAAAATATGAT+AGG | + | chr6_1:32522446-32522465 | None:intergenic | 25.0% |
!!! | CGATTTGTTTTCTTTATGTT+AGG | - | chr6_1:32522546-32522565 | Msa0882830:CDS | 25.0% |
! | AAATAAGCAGTATACAGTTT+AGG | + | chr6_1:32522727-32522746 | None:intergenic | 25.0% |
!!! | TTCATTTTTAATCTTCCTCA+TGG | + | chr6_1:32523213-32523232 | None:intergenic | 25.0% |
! | AAAATGAATTCATGACACAT+TGG | - | chr6_1:32523225-32523244 | Msa0882830:CDS | 25.0% |
! | AAATGAATTCATGACACATT+GGG | - | chr6_1:32523226-32523245 | Msa0882830:CDS | 25.0% |
!! | AGAACAAGAATTTGTTCATT+AGG | + | chr6_1:32523269-32523288 | None:intergenic | 25.0% |
! | AAAAAACTCAAGTATTCGAT+TGG | - | chr6_1:32523494-32523513 | Msa0882830:intron | 25.0% |
!! | TTTTTATTGAGAATGAAGCA+TGG | - | chr6_1:32523681-32523700 | Msa0882830:intron | 25.0% |
! | TATCAATTGCTTCTTATATC+AGG | - | chr6_1:32524284-32524303 | Msa0882830:intron | 25.0% |
!! | GTTATTATTTGAAGCATCTT+CGG | + | chr6_1:32524343-32524362 | None:intergenic | 25.0% |
!!! | TCTCTTTTTCAAGTTAATCT+CGG | + | chr6_1:32524607-32524626 | None:intergenic | 25.0% |
! | AATAATGACATCTATGTAGA+TGG | + | chr6_1:32524709-32524728 | None:intergenic | 25.0% |
! | AAACAATGGAATGAATTGTA+CGG | - | chr6_1:32524804-32524823 | Msa0882830:intron | 25.0% |
!! | GTGAAATGCTAATTTCATTT+TGG | - | chr6_1:32524877-32524896 | Msa0882830:intron | 25.0% |
! | ATTTGTCACATATATCCTAA+AGG | - | chr6_1:32524900-32524919 | Msa0882830:intron | 25.0% |
! | TTTGTCACATATATCCTAAA+GGG | - | chr6_1:32524901-32524920 | Msa0882830:intron | 25.0% |
! | TTTGTTGAAATATACCCTTT+AGG | + | chr6_1:32524918-32524937 | None:intergenic | 25.0% |
! | CAAAGATATAAAAGCTAAGA+GGG | - | chr6_1:32524981-32525000 | Msa0882830:CDS | 25.0% |
!!! | TAGTTGAACTTGTTATAGTT+TGG | - | chr6_1:32525199-32525218 | Msa0882830:five_prime_UTR | 25.0% |
!! | TAGTTTGGTTCAATTAGTAA+TGG | - | chr6_1:32525214-32525233 | Msa0882830:five_prime_UTR | 25.0% |
ATTGTTCCAGAAAATGATTC+TGG | + | chr6_1:32519194-32519213 | None:intergenic | 30.0% | |
! | GGAACAATTCTTATACCTTT+TGG | - | chr6_1:32519206-32519225 | Msa0882830:three_prime_UTR | 30.0% |
!!! | CAGTTTTTTTTTGCACCAAA+AGG | + | chr6_1:32519224-32519243 | None:intergenic | 30.0% |
GTGCAAAAAAAAACTGTTTC+TGG | - | chr6_1:32519228-32519247 | Msa0882830:three_prime_UTR | 30.0% | |
!! | CAAAAAAAAACTGTTTCTGG+AGG | - | chr6_1:32519231-32519250 | Msa0882830:three_prime_UTR | 30.0% |
ATGAGTTTCCTTATTACCTA+AGG | - | chr6_1:32519479-32519498 | Msa0882830:three_prime_UTR | 30.0% | |
! | AAACTCTAAGAAACCAAGTT+TGG | + | chr6_1:32519984-32520003 | None:intergenic | 30.0% |
GGCATATAATGCCATAATAA+AGG | - | chr6_1:32520009-32520028 | Msa0882830:CDS | 30.0% | |
!! | CCAGATTTTAGCCTTTATTA+TGG | + | chr6_1:32520023-32520042 | None:intergenic | 30.0% |
CCATAATAAAGGCTAAAATC+TGG | - | chr6_1:32520020-32520039 | Msa0882830:CDS | 30.0% | |
CTGATCTTTAAATTCCATCT+TGG | + | chr6_1:32520239-32520258 | None:intergenic | 30.0% | |
! | GTTCTCTGAAAAGCTATTAT+CGG | - | chr6_1:32520265-32520284 | Msa0882830:CDS | 30.0% |
!!! | CATGTTTTTTAGTTGTGACA+GGG | + | chr6_1:32520373-32520392 | None:intergenic | 30.0% |
! | TTTTTGTGTAGTGTTTCAGA+AGG | - | chr6_1:32521167-32521186 | Msa0882830:CDS | 30.0% |
!! | AACTTTCAACGTTTTGTTGA+CGG | + | chr6_1:32521282-32521301 | None:intergenic | 30.0% |
AAGCCTAAATATGGTTAACA+AGG | + | chr6_1:32521416-32521435 | None:intergenic | 30.0% | |
TAAAAGTAGATCGATTGTTC+GGG | + | chr6_1:32521444-32521463 | None:intergenic | 30.0% | |
TCTAACAACTACATTCGTAT+CGG | - | chr6_1:32521640-32521659 | Msa0882830:intron | 30.0% | |
CTTTGATCTCGATGTTATAA+GGG | + | chr6_1:32521882-32521901 | None:intergenic | 30.0% | |
ACTTTGATCTCGATGTTATA+AGG | + | chr6_1:32521883-32521902 | None:intergenic | 30.0% | |
! | TTTTCATGTCTTCTTCTAGT+TGG | + | chr6_1:32521942-32521961 | None:intergenic | 30.0% |
CATCAAATGGTAAGAAATTG+CGG | + | chr6_1:32522100-32522119 | None:intergenic | 30.0% | |
! | TTACCATTTGATGACTACTA+AGG | - | chr6_1:32522107-32522126 | Msa0882830:CDS | 30.0% |
!!! | AGATAACTAGTTTTCCGTTT+CGG | + | chr6_1:32522143-32522162 | None:intergenic | 30.0% |
AACTAGTTATCTCATCCAAT+AGG | - | chr6_1:32522151-32522170 | Msa0882830:intron | 30.0% | |
ACTGATCTTGTATATCAATG+TGG | - | chr6_1:32522236-32522255 | Msa0882830:intron | 30.0% | |
GAAGACTAATGATTCTAACA+AGG | - | chr6_1:32522314-32522333 | Msa0882830:CDS | 30.0% | |
!! | ATTGATCTTACTGCTTTTAC+AGG | + | chr6_1:32522694-32522713 | None:intergenic | 30.0% |
AATTAATTGTACATGCTTGC+AGG | - | chr6_1:32522761-32522780 | Msa0882830:intron | 30.0% | |
AAGAGTAATATACCTCTACA+TGG | + | chr6_1:32522960-32522979 | None:intergenic | 30.0% | |
! | TGTAGAGGTATATTACTCTT+CGG | - | chr6_1:32522960-32522979 | Msa0882830:intron | 30.0% |
TCATCGACGAATATAATAGT+CGG | + | chr6_1:32523143-32523162 | None:intergenic | 30.0% | |
TGAATGTGACTTTGTTCTAA+TGG | + | chr6_1:32523422-32523441 | None:intergenic | 30.0% | |
GTTTAAGTGAAGGGTAAAAT+TGG | - | chr6_1:32523545-32523564 | Msa0882830:CDS | 30.0% | |
TTTAATGTTGAGTAGGATCA+TGG | - | chr6_1:32523915-32523934 | Msa0882830:intron | 30.0% | |
! | CCTTTGACATAAGAGTTTTA+AGG | + | chr6_1:32523975-32523994 | None:intergenic | 30.0% |
CCTTAAAACTCTTATGTCAA+AGG | - | chr6_1:32523972-32523991 | Msa0882830:intron | 30.0% | |
AAAGGAAAAACACGAAAACT+TGG | - | chr6_1:32523990-32524009 | Msa0882830:intron | 30.0% | |
ATTTAGTGGAAGTGATCTAA+AGG | - | chr6_1:32524044-32524063 | Msa0882830:intron | 30.0% | |
!! | CTAAAGGTAAATTTTTCGAC+CGG | - | chr6_1:32524060-32524079 | Msa0882830:intron | 30.0% |
AAGAACCAGAAATTATCTTG+AGG | - | chr6_1:32524370-32524389 | Msa0882830:intron | 30.0% | |
TTAGCATTTCACACTCTTAA+AGG | + | chr6_1:32524869-32524888 | None:intergenic | 30.0% | |
!! | ATATCTTTGGAACACTTGAA+GGG | + | chr6_1:32524970-32524989 | None:intergenic | 30.0% |
!! | TATATCTTTGGAACACTTGA+AGG | + | chr6_1:32524971-32524990 | None:intergenic | 30.0% |
!! | CCTCTTAGCTTTTATATCTT+TGG | + | chr6_1:32524983-32525002 | None:intergenic | 30.0% |
CCAAAGATATAAAAGCTAAG+AGG | - | chr6_1:32524980-32524999 | Msa0882830:CDS | 30.0% | |
TATTAGTATTGTGTCATGTG+AGG | - | chr6_1:32525058-32525077 | Msa0882830:CDS | 30.0% | |
!! | GGAAGATGCAATTGATTTTT+AGG | - | chr6_1:32525085-32525104 | Msa0882830:CDS | 30.0% |
!! | GCAATTGATTTTTAGGAAGT+AGG | - | chr6_1:32525092-32525111 | Msa0882830:CDS | 30.0% |
ATTAGTAATGGTGATTGTCA+TGG | - | chr6_1:32525226-32525245 | Msa0882830:five_prime_UTR | 30.0% | |
!! | TTTTTGTCAGCATTGAGTGT+TGG | - | chr6_1:32519301-32519320 | Msa0882830:three_prime_UTR | 35.0% |
AAATCTTGGGACTTTCCAAA+TGG | - | chr6_1:32519707-32519726 | Msa0882830:intron | 35.0% | |
AATCTTGGGACTTTCCAAAT+GGG | - | chr6_1:32519708-32519727 | Msa0882830:intron | 35.0% | |
TTCATCAAAGAAACCCCATT+TGG | + | chr6_1:32519725-32519744 | None:intergenic | 35.0% | |
!!! | ATCTTAACCTCCCACTTTTT+GGG | - | chr6_1:32519826-32519845 | Msa0882830:intron | 35.0% |
ATCATGACCAGAACAATCAT+TGG | + | chr6_1:32519903-32519922 | None:intergenic | 35.0% | |
TTATATGCTTCGGATCAGAA+CGG | + | chr6_1:32520159-32520178 | None:intergenic | 35.0% | |
CTGATGTATACTAATCAGAC+CGG | + | chr6_1:32520192-32520211 | None:intergenic | 35.0% | |
AAAAAGACAGGCAAGTGAAA+AGG | - | chr6_1:32520307-32520326 | Msa0882830:intron | 35.0% | |
ATTAGTCCTTAAACCGACAA+TGG | + | chr6_1:32520337-32520356 | None:intergenic | 35.0% | |
!!! | CCATGTTTTTTAGTTGTGAC+AGG | + | chr6_1:32520374-32520393 | None:intergenic | 35.0% |
CCTGTCACAACTAAAAAACA+TGG | - | chr6_1:32520371-32520390 | Msa0882830:CDS | 35.0% | |
TTATGTCGAGCAAAGAGTAA+AGG | - | chr6_1:32520402-32520421 | Msa0882830:CDS | 35.0% | |
TCTATGATTGACCATCGTTT+AGG | + | chr6_1:32520551-32520570 | None:intergenic | 35.0% | |
GAAGTAATGTGCTAAAGCTT+TGG | + | chr6_1:32520859-32520878 | None:intergenic | 35.0% | |
!! | TGTTACTGATTTCTCTGTGA+AGG | - | chr6_1:32520902-32520921 | Msa0882830:intron | 35.0% |
!!! | AGACTTACTGGTTCTTTTCT+TGG | + | chr6_1:32521046-32521065 | None:intergenic | 35.0% |
AAGTTGCAAGTTAGACTTAC+TGG | + | chr6_1:32521058-32521077 | None:intergenic | 35.0% | |
AAAGTTCGAATAATCCTCCA+AGG | - | chr6_1:32521296-32521315 | Msa0882830:CDS | 35.0% | |
!! | TGGATTTGTTGAACCACTTT+GGG | + | chr6_1:32521368-32521387 | None:intergenic | 35.0% |
! | CTTTGTACAGTCACTTTACA+AGG | - | chr6_1:32521572-32521591 | Msa0882830:CDS | 35.0% |
!! | AGCTTGTTCTAAAATCACCA+AGG | - | chr6_1:32521734-32521753 | Msa0882830:CDS | 35.0% |
ATTGCAAAGAATTGGACGAA+AGG | - | chr6_1:32521842-32521861 | Msa0882830:CDS | 35.0% | |
TTGCAAAGAATTGGACGAAA+GGG | - | chr6_1:32521843-32521862 | Msa0882830:intron | 35.0% | |
GTTCCTTAGTAGTCATCAAA+TGG | + | chr6_1:32522113-32522132 | None:intergenic | 35.0% | |
AGCATGTCAAGCTAAACAAT+AGG | - | chr6_1:32522413-32522432 | Msa0882830:CDS | 35.0% | |
GAAAATGTTGACGATATTGC+CGG | - | chr6_1:32522568-32522587 | Msa0882830:CDS | 35.0% | |
!!! | CACTTTTATTTTCTGGTGCT+TGG | + | chr6_1:32522621-32522640 | None:intergenic | 35.0% |
AGCACCAGAAAATAAAAGTG+AGG | - | chr6_1:32522621-32522640 | Msa0882830:CDS | 35.0% | |
ATCCCTGTAACGAAAAAAGA+AGG | - | chr6_1:32522655-32522674 | Msa0882830:CDS | 35.0% | |
TAACACCTATCTCATTTGCA+GGG | + | chr6_1:32522833-32522852 | None:intergenic | 35.0% | |
ACCATCACTTCAAAATGGTT+CGG | - | chr6_1:32523065-32523084 | Msa0882830:CDS | 35.0% | |
ATCAAGATCAAATGGTCTGT+TGG | + | chr6_1:32523300-32523319 | None:intergenic | 35.0% | |
ATCGCTTCATCAAGATCAAA+TGG | + | chr6_1:32523308-32523327 | None:intergenic | 35.0% | |
TTGATGAAGCGATTATACGA+CGG | - | chr6_1:32523315-32523334 | Msa0882830:intron | 35.0% | |
GCTAACAATAAGACAAGATG+TGG | + | chr6_1:32523358-32523377 | None:intergenic | 35.0% | |
AATACAGCAGGAGAAAAAGA+AGG | - | chr6_1:32524186-32524205 | Msa0882830:intron | 35.0% | |
TCAGGAGAAGAAGAAAAAAG+AGG | - | chr6_1:32524302-32524321 | Msa0882830:intron | 35.0% | |
AAAGGCCTCAAGATAATTTC+TGG | + | chr6_1:32524378-32524397 | None:intergenic | 35.0% | |
TTCATGTCTTCCATGCTTAA+AGG | + | chr6_1:32524396-32524415 | None:intergenic | 35.0% | |
CATGAAACAAGCTAAGAATC+AGG | - | chr6_1:32524410-32524429 | Msa0882830:intron | 35.0% | |
AAACAAGCTAAGAATCAGGT+AGG | - | chr6_1:32524414-32524433 | Msa0882830:intron | 35.0% | |
!! | TACAAAGTGTCGTCAAATAG+TGG | - | chr6_1:32524531-32524550 | Msa0882830:intron | 35.0% |
GGCTATATTAAAACAGCTAG+CGG | - | chr6_1:32524552-32524571 | Msa0882830:intron | 35.0% | |
ATCTGTTAACAACATCACAC+TGG | - | chr6_1:32524674-32524693 | Msa0882830:intron | 35.0% | |
ATCGATGCATGATTATATGC+AGG | - | chr6_1:32524737-32524756 | Msa0882830:intron | 35.0% | |
TAATGGCTGAGCTAAAACAA+TGG | - | chr6_1:32524790-32524809 | Msa0882830:intron | 35.0% | |
GGGTATATTTCAACAAAGCA+AGG | - | chr6_1:32524921-32524940 | Msa0882830:intron | 35.0% | |
!!! | AGAGGGCTCTAGAATTTTTT+TGG | - | chr6_1:32524998-32525017 | Msa0882830:CDS | 35.0% |
! | TATTGTGTCATGTGAGGTTT+TGG | - | chr6_1:32525064-32525083 | Msa0882830:CDS | 35.0% |
! | TTGTCATGGATTGCATCAAA+TGG | - | chr6_1:32525240-32525259 | Msa0882830:five_prime_UTR | 35.0% |
TTTGACACCAACGTTGTCTT+CGG | - | chr6_1:32519118-32519137 | Msa0882830:three_prime_UTR | 40.0% | |
! | CTCTCTCCAGAATCATTTTC+TGG | - | chr6_1:32519185-32519204 | Msa0882830:three_prime_UTR | 40.0% |
!! | TTGAGTGTTGGTGTTGGATT+AGG | - | chr6_1:32519313-32519332 | Msa0882830:three_prime_UTR | 40.0% |
!! | CTCAAGAGACTTGTTGTTGA+TGG | - | chr6_1:32519433-32519452 | Msa0882830:three_prime_UTR | 40.0% |
ATCTTGGGACTTTCCAAATG+GGG | - | chr6_1:32519709-32519728 | Msa0882830:intron | 40.0% | |
!! | GATCTTAACCTCCCACTTTT+TGG | - | chr6_1:32519825-32519844 | Msa0882830:intron | 40.0% |
!!! | CTCCCACTTTTTGGGAAAAT+GGG | - | chr6_1:32519834-32519853 | Msa0882830:intron | 40.0% |
! | AGCCCATTTTCCCAAAAAGT+GGG | + | chr6_1:32519839-32519858 | None:intergenic | 40.0% |
TGGTAATCCAAAGTTAGGTC+AGG | - | chr6_1:32519860-32519879 | Msa0882830:intron | 40.0% | |
CTTATCTCCTGACCTAACTT+TGG | + | chr6_1:32519870-32519889 | None:intergenic | 40.0% | |
AGTCAGACCAATGATTGTTC+TGG | - | chr6_1:32519893-32519912 | Msa0882830:intron | 40.0% | |
TTCTGGTCATGATTTGAGCT+CGG | - | chr6_1:32519910-32519929 | Msa0882830:intron | 40.0% | |
TTAACCACTTGAGCCAAACT+TGG | - | chr6_1:32519968-32519987 | Msa0882830:intron | 40.0% | |
CTTCCTTGAAGGAAAAAGAC+AGG | - | chr6_1:32520295-32520314 | Msa0882830:intron | 40.0% | |
! | TTGCCTGTCTTTTTCCTTCA+AGG | + | chr6_1:32520301-32520320 | None:intergenic | 40.0% |
!!! | TTTTTAGTTGTGACAGGGCA+AGG | + | chr6_1:32520368-32520387 | None:intergenic | 40.0% |
!! | AGCAGGGCTATTTTACTTTC+TGG | - | chr6_1:32520702-32520721 | Msa0882830:intron | 40.0% |
!! | ATTTTACTTTCTGGTCCTGC+AGG | - | chr6_1:32520711-32520730 | Msa0882830:intron | 40.0% |
CTTGTACATAATGTACCTGC+AGG | + | chr6_1:32520729-32520748 | None:intergenic | 40.0% | |
CATTCGTTCCAAAGTCATCT+CGG | + | chr6_1:32521200-32521219 | None:intergenic | 40.0% | |
!! | ATGACTTTGGAACGAATGTC+TGG | - | chr6_1:32521202-32521221 | Msa0882830:CDS | 40.0% |
!! | GAACGAATGTCTGGTTTGTT+TGG | - | chr6_1:32521211-32521230 | Msa0882830:CDS | 40.0% |
! | TTTTCAATGACGCCTTCAAC+CGG | - | chr6_1:32521238-32521257 | Msa0882830:CDS | 40.0% |
!! | CTGGATTTGTTGAACCACTT+TGG | + | chr6_1:32521369-32521388 | None:intergenic | 40.0% |
CAAAGTGGTTCAACAAATCC+AGG | - | chr6_1:32521367-32521386 | Msa0882830:CDS | 40.0% | |
!!! | CAGGTTTTGGTTTCTATCTC+AGG | - | chr6_1:32521673-32521692 | Msa0882830:intron | 40.0% |
!! | TCAGGTTCAGTGTTGATACT+CGG | - | chr6_1:32521793-32521812 | Msa0882830:CDS | 40.0% |
ACCGAGATGAGTTTCATCTT+CGG | + | chr6_1:32521908-32521927 | None:intergenic | 40.0% | |
AAGGAACCAGAATACCGAAA+CGG | - | chr6_1:32522126-32522145 | Msa0882830:CDS | 40.0% | |
! | AGTTTTCCGTTTCGGTATTC+TGG | + | chr6_1:32522135-32522154 | None:intergenic | 40.0% |
AATGTGGACAGTTTGTCTCA+GGG | - | chr6_1:32522252-32522271 | Msa0882830:intron | 40.0% | |
GCAATAGGCATATCAAAGCT+AGG | + | chr6_1:32522376-32522395 | None:intergenic | 40.0% | |
ACATGCTCTTACGTATTCCT+CGG | + | chr6_1:32522400-32522419 | None:intergenic | 40.0% | |
!!! | TCGGCCTCACTTTTATTTTC+TGG | + | chr6_1:32522628-32522647 | None:intergenic | 40.0% |
CGTTACAGGGATAGATTTCT+CGG | + | chr6_1:32522647-32522666 | None:intergenic | 40.0% | |
!!! | CGCCTTCTTTTTTCGTTACA+GGG | + | chr6_1:32522660-32522679 | None:intergenic | 40.0% |
!!! | TCGCCTTCTTTTTTCGTTAC+AGG | + | chr6_1:32522661-32522680 | None:intergenic | 40.0% |
GTTATCCCTGCAAATGAGAT+AGG | - | chr6_1:32522825-32522844 | Msa0882830:intron | 40.0% | |
GTAACACCTATCTCATTTGC+AGG | + | chr6_1:32522834-32522853 | None:intergenic | 40.0% | |
! | TTAGAAGTCCACCTTTGAAG+AGG | + | chr6_1:32522935-32522954 | None:intergenic | 40.0% |
!! | CTTGGCTAGCATTGTTTTTC+CGG | + | chr6_1:32522997-32523016 | None:intergenic | 40.0% |
TGTCCACCATCACTTCAAAA+TGG | - | chr6_1:32523060-32523079 | Msa0882830:CDS | 40.0% | |
!!! | GAACCATTTTGAAGTGATGG+TGG | + | chr6_1:32523066-32523085 | None:intergenic | 40.0% |
!!! | TCCGAACCATTTTGAAGTGA+TGG | + | chr6_1:32523069-32523088 | None:intergenic | 40.0% |
GAATTCATGACACATTGGGA+TGG | - | chr6_1:32523230-32523249 | Msa0882830:CDS | 40.0% | |
!! | CATTGGGATGGACTATTATC+TGG | - | chr6_1:32523242-32523261 | Msa0882830:intron | 40.0% |
TATCCTCATGATCTTGCACA+TGG | - | chr6_1:32523739-32523758 | Msa0882830:CDS | 40.0% | |
CTATACAAGCTGTTGACAGA+GGG | + | chr6_1:32523767-32523786 | None:intergenic | 40.0% | |
ACTATACAAGCTGTTGACAG+AGG | + | chr6_1:32523768-32523787 | None:intergenic | 40.0% | |
ATGTTGAGTAGGATCATGGT+TGG | - | chr6_1:32523919-32523938 | Msa0882830:intron | 40.0% | |
TCTTCCATCTGCTGAGAATA+GGG | - | chr6_1:32523942-32523961 | Msa0882830:intron | 40.0% | |
ATTTCCCTATTCTCAGCAGA+TGG | + | chr6_1:32523949-32523968 | None:intergenic | 40.0% | |
ACACGAAAACTTGGACTTCA+AGG | - | chr6_1:32523999-32524018 | Msa0882830:intron | 40.0% | |
ACCATGACAGAAGGATTTAG+TGG | - | chr6_1:32524030-32524049 | Msa0882830:intron | 40.0% | |
TCCACTAAATCCTTCTGTCA+TGG | + | chr6_1:32524034-32524053 | None:intergenic | 40.0% | |
ACAGAATTTGTGCATAACCG+CGG | - | chr6_1:32524141-32524160 | Msa0882830:intron | 40.0% | |
TGCTGTATTAACTCCCTAAC+AGG | + | chr6_1:32524175-32524194 | None:intergenic | 40.0% | |
TGTTAGGGAGTTAATACAGC+AGG | - | chr6_1:32524174-32524193 | Msa0882830:intron | 40.0% | |
GCAGGAGAAAAAGAAGGAAA+TGG | - | chr6_1:32524192-32524211 | Msa0882830:intron | 40.0% | |
TATCTTGAGGCCTTTAAGCA+TGG | - | chr6_1:32524383-32524402 | Msa0882830:intron | 40.0% | |
! | TTCAAGTTAATCTCGGATCG+CGG | + | chr6_1:32524600-32524619 | None:intergenic | 40.0% |
GATGCATGATTATATGCAGG+TGG | - | chr6_1:32524740-32524759 | Msa0882830:intron | 40.0% | |
TGCATCAGAAGGTTCAGTAA+TGG | - | chr6_1:32524773-32524792 | Msa0882830:intron | 40.0% | |
AAAGACTCCGAAGACAACGT+TGG | + | chr6_1:32519128-32519147 | None:intergenic | 45.0% | |
!! | CTGTTTCTGGAGGGTCTTAA+AGG | - | chr6_1:32519241-32519260 | Msa0882830:three_prime_UTR | 45.0% |
!! | TCAGCATTGAGTGTTGGTGT+TGG | - | chr6_1:32519307-32519326 | Msa0882830:three_prime_UTR | 45.0% |
!! | GTTGGTGTTGGATTAGGTGT+TGG | - | chr6_1:32519319-32519338 | Msa0882830:three_prime_UTR | 45.0% |
!! | GTTGGATTAGGTGTTGGACT+TGG | - | chr6_1:32519325-32519344 | Msa0882830:three_prime_UTR | 45.0% |
GTTGGACTTGGATTGAGTTC+TGG | - | chr6_1:32519337-32519356 | Msa0882830:three_prime_UTR | 45.0% | |
TGGACAAGCTGTCCAGAAAT+GGG | - | chr6_1:32519357-32519376 | Msa0882830:three_prime_UTR | 45.0% | |
! | CCATTTTCCCAAAAAGTGGG+AGG | + | chr6_1:32519836-32519855 | None:intergenic | 45.0% |
!!! | CCTCCCACTTTTTGGGAAAA+TGG | - | chr6_1:32519833-32519852 | Msa0882830:intron | 45.0% |
! | GAGCCCATTTTCCCAAAAAG+TGG | + | chr6_1:32519840-32519859 | None:intergenic | 45.0% |
!! | CTTTTTGGGAAAATGGGCTC+TGG | - | chr6_1:32519840-32519859 | Msa0882830:intron | 45.0% |
! | GGCTCTGGTAATCCAAAGTT+AGG | - | chr6_1:32519855-32519874 | Msa0882830:intron | 45.0% |
TCTGGTCATGATTTGAGCTC+GGG | - | chr6_1:32519911-32519930 | Msa0882830:intron | 45.0% | |
! | GAAACCAAGTTTGGCTCAAG+TGG | + | chr6_1:32519975-32519994 | None:intergenic | 45.0% |
!! | TCTGGTTCATGCTAGTTCTG+TGG | - | chr6_1:32520038-32520057 | Msa0882830:CDS | 45.0% |
TCGGTGAAACACTTCCTTGA+AGG | - | chr6_1:32520284-32520303 | Msa0882830:intron | 45.0% | |
AGTCCTTAAACCGACAATGG+CGG | + | chr6_1:32520334-32520353 | None:intergenic | 45.0% | |
! | TCGAGTTTTGCTGACAAGTG+CGG | - | chr6_1:32520620-32520639 | Msa0882830:intron | 45.0% |
TGAGAGGTTTCTTGTGTGCT+TGG | + | chr6_1:32520676-32520695 | None:intergenic | 45.0% | |
AGTAAAATAGCCCTGCTTGC+CGG | + | chr6_1:32520699-32520718 | None:intergenic | 45.0% | |
TCTGCTTTGCAACTGCACAA+GGG | + | chr6_1:32521014-32521033 | None:intergenic | 45.0% | |
ATCTGCTTTGCAACTGCACA+AGG | + | chr6_1:32521015-32521034 | None:intergenic | 45.0% | |
GTGCAGTTGCAAAGCAGATT+TGG | - | chr6_1:32521016-32521035 | Msa0882830:intron | 45.0% | |
GTCGATATCCGAGATGACTT+TGG | - | chr6_1:32521189-32521208 | Msa0882830:CDS | 45.0% | |
!! | GGTTGAAGGCGTCATTGAAA+AGG | + | chr6_1:32521239-32521258 | None:intergenic | 45.0% |
!! | GAGAGTACCTCTAGTTTCAC+CGG | + | chr6_1:32521260-32521279 | None:intergenic | 45.0% |
CGAATAATCCTCCAAGGCTT+CGG | - | chr6_1:32521302-32521321 | Msa0882830:CDS | 45.0% | |
AGTAGCACTTCTTCCCAAAG+TGG | - | chr6_1:32521352-32521371 | Msa0882830:CDS | 45.0% | |
AAGTAGATCGATTGTTCGGG+TGG | + | chr6_1:32521441-32521460 | None:intergenic | 45.0% | |
!!! | TCGTATCGGCTCAATTTTGC+AGG | - | chr6_1:32521654-32521673 | Msa0882830:intron | 45.0% |
! | CGGCTCAATTTTGCAGGTTT+TGG | - | chr6_1:32521660-32521679 | Msa0882830:intron | 45.0% |
CCGAGATGAGTTTCATCTTC+GGG | + | chr6_1:32521907-32521926 | None:intergenic | 45.0% | |
CCCGAAGATGAAACTCATCT+CGG | - | chr6_1:32521904-32521923 | Msa0882830:intron | 45.0% | |
ATGAAACTCATCTCGGTAGC+TGG | - | chr6_1:32521911-32521930 | Msa0882830:intron | 45.0% | |
CAATGTGGACAGTTTGTCTC+AGG | - | chr6_1:32522251-32522270 | Msa0882830:intron | 45.0% | |
TTGATATGCCTATTGCACCG+AGG | - | chr6_1:32522380-32522399 | Msa0882830:CDS | 45.0% | |
! | TACGTATTCCTCGGTGCAAT+AGG | + | chr6_1:32522391-32522410 | None:intergenic | 45.0% |
!! | CTTACTGCTTTTACAGGCAC+TGG | + | chr6_1:32522688-32522707 | None:intergenic | 45.0% |
TACATGCTTGCAGGAAGTTC+CGG | - | chr6_1:32522770-32522789 | Msa0882830:intron | 45.0% | |
TCATTTGCAGGGATAACCTC+TGG | + | chr6_1:32522822-32522841 | None:intergenic | 45.0% | |
! | GGTGTTACATTCGCAGACAT+CGG | - | chr6_1:32522846-32522865 | Msa0882830:CDS | 45.0% |
AGCTAGTAATGCTTCCCCTT+AGG | - | chr6_1:32522901-32522920 | Msa0882830:intron | 45.0% | |
!! | GGACTTCTAAAGCCATGTAG+AGG | - | chr6_1:32522945-32522964 | Msa0882830:intron | 45.0% |
ATATTACTCTTCGGTCCACC+TGG | - | chr6_1:32522969-32522988 | Msa0882830:intron | 45.0% | |
!! | ATTGTTTTTCCGGTACCAGG+TGG | + | chr6_1:32522987-32523006 | None:intergenic | 45.0% |
!! | AGCATTGTTTTTCCGGTACC+AGG | + | chr6_1:32522990-32523009 | None:intergenic | 45.0% |
CGGAAAAACAATGCTAGCCA+AGG | - | chr6_1:32522995-32523014 | Msa0882830:intron | 45.0% | |
TTTGTTCACGCTAGCAGCTA+AGG | - | chr6_1:32523112-32523131 | Msa0882830:CDS | 45.0% | |
GATGAAGTTGACAGCATGCT+CGG | - | chr6_1:32523158-32523177 | Msa0882830:CDS | 45.0% | |
TACTAGAGTCGGAGAACATG+AGG | - | chr6_1:32523187-32523206 | Msa0882830:CDS | 45.0% | |
GATCCATGTGCAAGATCATG+AGG | + | chr6_1:32523745-32523764 | None:intergenic | 45.0% | |
GTCTTCCATCTGCTGAGAAT+AGG | - | chr6_1:32523941-32523960 | Msa0882830:intron | 45.0% | |
GAACTAGCAACCATGACAGA+AGG | - | chr6_1:32524021-32524040 | Msa0882830:intron | 45.0% | |
! | GCTGCAAGTTTTGCATCAGA+AGG | - | chr6_1:32524762-32524781 | Msa0882830:intron | 45.0% |
TGGAATGAATTGTACGGCGA+AGG | - | chr6_1:32524810-32524829 | Msa0882830:intron | 45.0% | |
AATGAATTGTACGGCGAAGG+CGG | - | chr6_1:32524813-32524832 | Msa0882830:intron | 45.0% | |
!!! | TAATTATATTTATATTTTTG+TGG | - | chr6_1:32519550-32519569 | Msa0882830:exon | 5.0% |
!!! | AATTATATTTATATTTTTGT+GGG | - | chr6_1:32519551-32519570 | Msa0882830:exon | 5.0% |
CTGGACAAGCTGTCCAGAAA+TGG | - | chr6_1:32519356-32519375 | Msa0882830:three_prime_UTR | 50.0% | |
CAAGCTGTCCAGAAATGGGT+TGG | - | chr6_1:32519361-32519380 | Msa0882830:three_prime_UTR | 50.0% | |
!! | CTGTCCAGAAATGGGTTGGA+GGG | - | chr6_1:32519365-32519384 | Msa0882830:three_prime_UTR | 50.0% |
GATTCCCTCCAACCCATTTC+TGG | + | chr6_1:32519372-32519391 | None:intergenic | 50.0% | |
AGGGAATCGCGATATCGATG+AGG | - | chr6_1:32519384-32519403 | Msa0882830:three_prime_UTR | 50.0% | |
CGCGATATCGATGAGGTTTC+TGG | - | chr6_1:32519391-32519410 | Msa0882830:three_prime_UTR | 50.0% | |
GTGAAAAGGACCGCCATTGT+CGG | - | chr6_1:32520321-32520340 | Msa0882830:intron | 50.0% | |
GCACACAAGAAACCTCTCAC+CGG | - | chr6_1:32520677-32520696 | Msa0882830:intron | 50.0% | |
! | CCTCTAGTTTCACCGGTTGA+AGG | + | chr6_1:32521253-32521272 | None:intergenic | 50.0% |
CCTTCAACCGGTGAAACTAG+AGG | - | chr6_1:32521250-32521269 | Msa0882830:CDS | 50.0% | |
ATAATCCTCCAAGGCTTCGG+AGG | - | chr6_1:32521305-32521324 | Msa0882830:CDS | 50.0% | |
ACTTAGATCAGACGCAGCAG+AGG | + | chr6_1:32521335-32521354 | None:intergenic | 50.0% | |
CGGGTGGTCAAGCCTAAATA+TGG | + | chr6_1:32521425-32521444 | None:intergenic | 50.0% | |
AATTGGACGAAAGGGTCGCT+AGG | - | chr6_1:32521851-32521870 | Msa0882830:intron | 50.0% | |
ACTCATCTCGGTAGCTGGAA+AGG | - | chr6_1:32521916-32521935 | Msa0882830:intron | 50.0% | |
! | CCACATTGCTGAAGTACTCG+CGG | - | chr6_1:32521987-32522006 | Msa0882830:intron | 50.0% |
TCAGGGATTGAGTCTGTTCC+AGG | - | chr6_1:32522269-32522288 | Msa0882830:CDS | 50.0% | |
GGATTGAGTCTGTTCCAGGA+AGG | - | chr6_1:32522273-32522292 | Msa0882830:CDS | 50.0% | |
TTCCAGGAAGGCAAGAGTAG+TGG | - | chr6_1:32522285-32522304 | Msa0882830:CDS | 50.0% | |
TTCCACTACTCTTGCCTTCC+TGG | + | chr6_1:32522290-32522309 | None:intergenic | 50.0% | |
CCTCACATCATTCTTTGCGC+CGG | + | chr6_1:32522590-32522609 | None:intergenic | 50.0% | |
CGAGAAGCGAATTAGACCAG+AGG | - | chr6_1:32522803-32522822 | Msa0882830:intron | 50.0% | |
ATTCGCAGACATCGGTGCAT+TGG | - | chr6_1:32522854-32522873 | Msa0882830:CDS | 50.0% | |
AAGAGGTCTGGTCTCCTAAG+GGG | + | chr6_1:32522918-32522937 | None:intergenic | 50.0% | |
GAAGAGGTCTGGTCTCCTAA+GGG | + | chr6_1:32522919-32522938 | None:intergenic | 50.0% | |
TGAAGAGGTCTGGTCTCCTA+AGG | + | chr6_1:32522920-32522939 | None:intergenic | 50.0% | |
AGGAGACCAGACCTCTTCAA+AGG | - | chr6_1:32522921-32522940 | Msa0882830:intron | 50.0% | |
AGACCAGACCTCTTCAAAGG+TGG | - | chr6_1:32522924-32522943 | Msa0882830:intron | 50.0% | |
! | AGTCCACCTTTGAAGAGGTC+TGG | + | chr6_1:32522930-32522949 | None:intergenic | 50.0% |
TGCTTCATTCGCAATCGCCT+TGG | + | chr6_1:32523015-32523034 | None:intergenic | 50.0% | |
AAGGCGATTGCGAATGAAGC+AGG | - | chr6_1:32523014-32523033 | Msa0882830:intron | 50.0% | |
TCTCGGATCGCGGAAAATAG+TGG | + | chr6_1:32524590-32524609 | None:intergenic | 50.0% | |
!! | GCTGTCCAGAAATGGGTTGG+AGG | - | chr6_1:32519364-32519383 | Msa0882830:three_prime_UTR | 55.0% |
!! | GGACCGCCATTGTCGGTTTA+AGG | - | chr6_1:32520328-32520347 | Msa0882830:intron | 55.0% |
AAACCTCTCACCGGCAAGCA+GGG | - | chr6_1:32520686-32520705 | Msa0882830:intron | 55.0% | |
CCGCGAGTACTTCAGCAATG+TGG | + | chr6_1:32521990-32522009 | None:intergenic | 55.0% | |
GATCAGCAGTATGCGCAGCA+GGG | + | chr6_1:32522476-32522495 | None:intergenic | 55.0% | |
TGATCAGCAGTATGCGCAGC+AGG | + | chr6_1:32522477-32522496 | None:intergenic | 55.0% | |
TGCTGCGCATACTGCTGATC+AGG | - | chr6_1:32522476-32522495 | Msa0882830:CDS | 55.0% | |
GCTGCGCATACTGCTGATCA+GGG | - | chr6_1:32522477-32522496 | Msa0882830:CDS | 55.0% | |
CCGGCGCAAAGAATGATGTG+AGG | - | chr6_1:32522587-32522606 | Msa0882830:CDS | 55.0% | |
CGCTTCTCGAACTCGTTGTC+CGG | + | chr6_1:32522792-32522811 | None:intergenic | 55.0% | |
CTCGGTCAGCGTACTAGAGT+CGG | - | chr6_1:32523176-32523195 | Msa0882830:CDS | 55.0% | |
TCGGAGAACATGAGGCCATG+AGG | - | chr6_1:32523195-32523214 | Msa0882830:CDS | 55.0% | |
TTATACGACGGTTCGAGCGC+AGG | - | chr6_1:32523327-32523346 | Msa0882830:intron | 55.0% | |
CCTAACAGGTCGATAAGCCG+CGG | + | chr6_1:32524161-32524180 | None:intergenic | 55.0% | |
CGCGGCTTATCGACCTGTTA+GGG | - | chr6_1:32524159-32524178 | Msa0882830:intron | 55.0% | |
GAAACCTCTCACCGGCAAGC+AGG | - | chr6_1:32520685-32520704 | Msa0882830:intron | 60.0% | |
GCATTCCTCCGAAGCCTTGG+AGG | + | chr6_1:32521313-32521332 | None:intergenic | 60.0% | |
! | GAGGCATTCCTCCGAAGCCT+TGG | + | chr6_1:32521316-32521335 | None:intergenic | 60.0% |
CTCTTCGGTCCACCTGGTAC+CGG | - | chr6_1:32522975-32522994 | Msa0882830:intron | 60.0% | |
CCGCGGCTTATCGACCTGTT+AGG | - | chr6_1:32524158-32524177 | Msa0882830:intron | 60.0% | |
TGTACGGCGAAGGCGGTTCA+AGG | - | chr6_1:32524820-32524839 | Msa0882830:intron | 60.0% | |
TAGCCCTGCTTGCCGGTGAG+AGG | + | chr6_1:32520692-32520711 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6_1 | gene | 32519112 | 32525317 | 32519112 | ID=Msa0882830;Name=Msa0882830 |
chr6_1 | mRNA | 32519112 | 32525317 | 32519112 | ID=Msa0882830-mRNA-1;Parent=Msa0882830;Name=Msa0882830-mRNA-1;_AED=0.13;_eAED=0.13;_QI=171|1|1|1|1|1|14|445|818 |
chr6_1 | exon | 32519112 | 32519670 | 32519112 | ID=Msa0882830-mRNA-1:exon:8064;Parent=Msa0882830-mRNA-1 |
chr6_1 | exon | 32519998 | 32520123 | 32519998 | ID=Msa0882830-mRNA-1:exon:8063;Parent=Msa0882830-mRNA-1 |
chr6_1 | exon | 32520216 | 32520284 | 32520216 | ID=Msa0882830-mRNA-1:exon:8062;Parent=Msa0882830-mRNA-1 |
chr6_1 | exon | 32520364 | 32520499 | 32520364 | ID=Msa0882830-mRNA-1:exon:8061;Parent=Msa0882830-mRNA-1 |
chr6_1 | exon | 32521081 | 32521646 | 32521081 | ID=Msa0882830-mRNA-1:exon:8060;Parent=Msa0882830-mRNA-1 |
chr6_1 | exon | 32521727 | 32521861 | 32521727 | ID=Msa0882830-mRNA-1:exon:8059;Parent=Msa0882830-mRNA-1 |
chr6_1 | exon | 32522094 | 32522166 | 32522094 | ID=Msa0882830-mRNA-1:exon:8058;Parent=Msa0882830-mRNA-1 |
chr6_1 | exon | 32522257 | 32522753 | 32522257 | ID=Msa0882830-mRNA-1:exon:8057;Parent=Msa0882830-mRNA-1 |
chr6_1 | exon | 32522836 | 32522900 | 32522836 | ID=Msa0882830-mRNA-1:exon:8056;Parent=Msa0882830-mRNA-1 |
chr6_1 | exon | 32523041 | 32523251 | 32523041 | ID=Msa0882830-mRNA-1:exon:8055;Parent=Msa0882830-mRNA-1 |
chr6_1 | exon | 32523372 | 32523407 | 32523372 | ID=Msa0882830-mRNA-1:exon:8054;Parent=Msa0882830-mRNA-1 |
chr6_1 | exon | 32523506 | 32523594 | 32523506 | ID=Msa0882830-mRNA-1:exon:8053;Parent=Msa0882830-mRNA-1 |
chr6_1 | exon | 32523697 | 32523818 | 32523697 | ID=Msa0882830-mRNA-1:exon:8052;Parent=Msa0882830-mRNA-1 |
chr6_1 | exon | 32524929 | 32525317 | 32524929 | ID=Msa0882830-mRNA-1:exon:8051;Parent=Msa0882830-mRNA-1 |
chr6_1 | five_prime_UTR | 32525147 | 32525317 | 32525147 | ID=Msa0882830-mRNA-1:five_prime_utr;Parent=Msa0882830-mRNA-1 |
chr6_1 | CDS | 32524929 | 32525146 | 32524929 | ID=Msa0882830-mRNA-1:cds;Parent=Msa0882830-mRNA-1 |
chr6_1 | CDS | 32523697 | 32523818 | 32523697 | ID=Msa0882830-mRNA-1:cds;Parent=Msa0882830-mRNA-1 |
chr6_1 | CDS | 32523506 | 32523594 | 32523506 | ID=Msa0882830-mRNA-1:cds;Parent=Msa0882830-mRNA-1 |
chr6_1 | CDS | 32523372 | 32523407 | 32523372 | ID=Msa0882830-mRNA-1:cds;Parent=Msa0882830-mRNA-1 |
chr6_1 | CDS | 32523041 | 32523251 | 32523041 | ID=Msa0882830-mRNA-1:cds;Parent=Msa0882830-mRNA-1 |
chr6_1 | CDS | 32522836 | 32522900 | 32522836 | ID=Msa0882830-mRNA-1:cds;Parent=Msa0882830-mRNA-1 |
chr6_1 | CDS | 32522257 | 32522753 | 32522257 | ID=Msa0882830-mRNA-1:cds;Parent=Msa0882830-mRNA-1 |
chr6_1 | CDS | 32522094 | 32522166 | 32522094 | ID=Msa0882830-mRNA-1:cds;Parent=Msa0882830-mRNA-1 |
chr6_1 | CDS | 32521727 | 32521861 | 32521727 | ID=Msa0882830-mRNA-1:cds;Parent=Msa0882830-mRNA-1 |
chr6_1 | CDS | 32521081 | 32521646 | 32521081 | ID=Msa0882830-mRNA-1:cds;Parent=Msa0882830-mRNA-1 |
chr6_1 | CDS | 32520364 | 32520499 | 32520364 | ID=Msa0882830-mRNA-1:cds;Parent=Msa0882830-mRNA-1 |
chr6_1 | CDS | 32520216 | 32520284 | 32520216 | ID=Msa0882830-mRNA-1:cds;Parent=Msa0882830-mRNA-1 |
chr6_1 | CDS | 32519998 | 32520123 | 32519998 | ID=Msa0882830-mRNA-1:cds;Parent=Msa0882830-mRNA-1 |
chr6_1 | CDS | 32519557 | 32519670 | 32519557 | ID=Msa0882830-mRNA-1:cds;Parent=Msa0882830-mRNA-1 |
chr6_1 | three_prime_UTR | 32519112 | 32519556 | 32519112 | ID=Msa0882830-mRNA-1:three_prime_utr;Parent=Msa0882830-mRNA-1 |
Gene Sequence |
Protein sequence |