Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0910180 | XP_013451687.1 | 97.311 | 818 | 17 | 1 | 1 | 818 | 1 | 813 | 0.0 | 1628 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0910180 | sp|Q7ZZ25|ATD1A_DANRE | 44.815 | 270 | 143 | 4 | 487 | 751 | 73 | 341 | 2.10e-71 | 242 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0882830 | Msa0910180 | 0.939119 | 2.169993e-99 | -8.615850e-47 |
Msa0910180 | Msa0947930 | 0.818823 | 1.603093e-52 | -8.615850e-47 |
Msa0910180 | Msa0984510 | 0.940156 | 3.773630e-100 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0910180 | MtrunA17_Chr6g0462581 | 97.311 | 818 | 17 | 1 | 1 | 818 | 1 | 813 | 0.0 | 1628 |
Msa0910180 | MtrunA17_Chr5g0397121 | 67.028 | 831 | 258 | 8 | 1 | 818 | 1 | 828 | 0.0 | 1101 |
Msa0910180 | MtrunA17_Chr8g0387641 | 63.457 | 862 | 256 | 15 | 1 | 818 | 1 | 847 | 0.0 | 1046 |
Msa0910180 | MtrunA17_Chr1g0202381 | 59.758 | 825 | 255 | 11 | 3 | 818 | 29 | 785 | 0.0 | 926 |
Msa0910180 | MtrunA17_Chr1g0202371 | 56.295 | 826 | 240 | 12 | 1 | 818 | 1 | 713 | 0.0 | 831 |
Msa0910180 | MtrunA17_Chr3g0116131 | 37.655 | 887 | 374 | 19 | 49 | 818 | 383 | 1207 | 6.24e-176 | 539 |
Msa0910180 | MtrunA17_Chr1g0204031 | 72.781 | 338 | 88 | 4 | 485 | 818 | 537 | 874 | 3.30e-159 | 486 |
Msa0910180 | MtrunA17_Chr1g0195741 | 42.720 | 625 | 254 | 10 | 237 | 818 | 680 | 1243 | 4.04e-159 | 496 |
Msa0910180 | MtrunA17_Chr1g0195741 | 37.963 | 108 | 59 | 2 | 49 | 154 | 424 | 525 | 1.70e-14 | 78.2 |
Msa0910180 | MtrunA17_Chr1g0195731 | 42.697 | 623 | 253 | 11 | 239 | 818 | 678 | 1239 | 1.65e-153 | 481 |
Msa0910180 | MtrunA17_Chr1g0195731 | 40.426 | 94 | 54 | 1 | 45 | 136 | 413 | 506 | 3.01e-14 | 77.4 |
Msa0910180 | MtrunA17_Chr4g0038101 | 42.442 | 516 | 218 | 5 | 308 | 816 | 570 | 1013 | 1.09e-125 | 402 |
Msa0910180 | MtrunA17_Chr3g0127401 | 48.039 | 306 | 127 | 6 | 487 | 785 | 63 | 343 | 7.26e-83 | 270 |
Msa0910180 | MtrunA17_Chr3g0127431 | 50.183 | 273 | 133 | 3 | 484 | 754 | 63 | 334 | 2.97e-82 | 269 |
Msa0910180 | MtrunA17_Chr6g0459561 | 42.042 | 333 | 154 | 8 | 485 | 804 | 352 | 658 | 1.71e-70 | 244 |
Msa0910180 | MtrunA17_Chr6g0459541 | 37.604 | 359 | 158 | 11 | 485 | 804 | 12 | 343 | 2.79e-64 | 219 |
Msa0910180 | MtrunA17_Chr7g0246111 | 42.294 | 279 | 150 | 5 | 454 | 730 | 168 | 437 | 1.58e-62 | 219 |
Msa0910180 | MtrunA17_Chr4g0004121 | 42.593 | 270 | 146 | 4 | 483 | 745 | 221 | 488 | 1.75e-62 | 219 |
Msa0910180 | MtrunA17_Chr4g0052271 | 46.320 | 231 | 120 | 4 | 505 | 733 | 119 | 347 | 8.15e-59 | 206 |
Msa0910180 | MtrunA17_Chr4g0026631 | 47.598 | 229 | 112 | 5 | 505 | 729 | 127 | 351 | 1.34e-57 | 203 |
Msa0910180 | MtrunA17_Chr2g0321241 | 46.725 | 229 | 114 | 5 | 505 | 729 | 132 | 356 | 1.67e-57 | 203 |
Msa0910180 | MtrunA17_Chr6g0459551 | 38.580 | 324 | 148 | 9 | 485 | 765 | 72 | 387 | 2.54e-53 | 191 |
Msa0910180 | MtrunA17_Chr1g0180791 | 34.426 | 305 | 187 | 6 | 505 | 804 | 478 | 774 | 8.39e-48 | 182 |
Msa0910180 | MtrunA17_Chr1g0180791 | 42.105 | 228 | 126 | 4 | 505 | 729 | 205 | 429 | 3.29e-45 | 174 |
Msa0910180 | MtrunA17_Chr2g0327121 | 38.525 | 244 | 143 | 5 | 505 | 743 | 480 | 721 | 2.41e-47 | 181 |
Msa0910180 | MtrunA17_Chr2g0327121 | 41.667 | 228 | 127 | 4 | 505 | 729 | 207 | 431 | 4.04e-42 | 165 |
Msa0910180 | MtrunA17_Chr7g0264521 | 34.426 | 305 | 186 | 7 | 505 | 804 | 479 | 774 | 1.28e-46 | 179 |
Msa0910180 | MtrunA17_Chr7g0264521 | 41.667 | 228 | 127 | 4 | 505 | 729 | 206 | 430 | 8.93e-45 | 173 |
Msa0910180 | MtrunA17_Chr6g0459531 | 34.983 | 303 | 141 | 8 | 505 | 804 | 67 | 316 | 3.35e-45 | 165 |
Msa0910180 | MtrunA17_Chr3g0145011 | 36.667 | 270 | 154 | 9 | 499 | 758 | 136 | 398 | 1.46e-41 | 157 |
Msa0910180 | MtrunA17_Chr3g0141901 | 36.940 | 268 | 152 | 9 | 499 | 756 | 133 | 393 | 3.58e-41 | 155 |
Msa0910180 | MtrunA17_Chr3g0135721 | 42.128 | 235 | 125 | 7 | 496 | 725 | 215 | 443 | 6.25e-41 | 160 |
Msa0910180 | MtrunA17_Chr7g0255721 | 34.965 | 286 | 153 | 7 | 475 | 729 | 628 | 911 | 8.36e-41 | 162 |
Msa0910180 | MtrunA17_Chr7g0255721 | 32.246 | 276 | 170 | 7 | 543 | 805 | 422 | 693 | 5.85e-32 | 134 |
Msa0910180 | MtrunA17_Chr7g0217421 | 41.564 | 243 | 131 | 7 | 504 | 741 | 38 | 274 | 9.20e-41 | 154 |
Msa0910180 | MtrunA17_Chr3g0135761 | 42.979 | 235 | 123 | 7 | 496 | 725 | 213 | 441 | 9.45e-41 | 160 |
Msa0910180 | MtrunA17_Chr8g0362771 | 41.667 | 240 | 126 | 7 | 491 | 725 | 227 | 457 | 1.41e-40 | 159 |
Msa0910180 | MtrunA17_Chr7g0255901 | 34.539 | 304 | 166 | 10 | 505 | 802 | 639 | 915 | 1.44e-40 | 160 |
Msa0910180 | MtrunA17_Chr7g0255641 | 37.118 | 229 | 138 | 4 | 505 | 729 | 658 | 884 | 8.06e-40 | 159 |
Msa0910180 | MtrunA17_Chr7g0255641 | 32.852 | 277 | 145 | 11 | 544 | 814 | 432 | 673 | 1.70e-29 | 126 |
Msa0910180 | MtrunA17_Chr5g0429571 | 42.731 | 227 | 119 | 5 | 505 | 723 | 313 | 536 | 1.01e-39 | 157 |
Msa0910180 | MtrunA17_Chr3g0104211 | 43.860 | 228 | 115 | 6 | 505 | 723 | 304 | 527 | 1.71e-39 | 157 |
Msa0910180 | MtrunA17_Chr3g0143721 | 40.496 | 242 | 132 | 7 | 502 | 734 | 246 | 484 | 2.44e-39 | 155 |
Msa0910180 | MtrunA17_Chr7g0255651 | 38.819 | 237 | 138 | 4 | 505 | 736 | 282 | 516 | 2.00e-38 | 151 |
Msa0910180 | MtrunA17_Chr7g0255651 | 27.984 | 243 | 159 | 5 | 530 | 765 | 38 | 271 | 9.27e-15 | 78.2 |
Msa0910180 | MtrunA17_Chr4g0050561 | 37.931 | 232 | 132 | 7 | 506 | 729 | 157 | 384 | 2.96e-38 | 147 |
Msa0910180 | MtrunA17_Chr7g0248361 | 39.224 | 232 | 130 | 6 | 505 | 728 | 192 | 420 | 8.16e-38 | 150 |
Msa0910180 | MtrunA17_Chr5g0432631 | 39.344 | 244 | 137 | 7 | 491 | 729 | 215 | 452 | 1.61e-37 | 151 |
Msa0910180 | MtrunA17_Chr1g0182711 | 35.656 | 244 | 148 | 5 | 506 | 743 | 189 | 429 | 2.09e-37 | 146 |
Msa0910180 | MtrunA17_Chr4g0052411 | 41.333 | 225 | 124 | 6 | 504 | 723 | 228 | 449 | 2.11e-37 | 149 |
Msa0910180 | MtrunA17_Chr7g0262801 | 35.656 | 244 | 148 | 5 | 506 | 743 | 188 | 428 | 2.45e-37 | 145 |
Msa0910180 | MtrunA17_Chr8g0345461 | 37.118 | 229 | 137 | 4 | 505 | 728 | 165 | 391 | 3.09e-37 | 145 |
Msa0910180 | MtrunA17_Chr4g0033451 | 39.749 | 239 | 130 | 6 | 505 | 733 | 380 | 614 | 1.34e-36 | 149 |
Msa0910180 | MtrunA17_Chr1g0204051 | 78.667 | 75 | 16 | 0 | 634 | 708 | 1 | 75 | 2.20e-36 | 131 |
Msa0910180 | MtrunA17_Chr2g0297281 | 41.333 | 225 | 124 | 6 | 504 | 723 | 285 | 506 | 2.24e-36 | 147 |
Msa0910180 | MtrunA17_Chr6g0456351 | 39.738 | 229 | 129 | 5 | 505 | 728 | 317 | 541 | 1.15e-35 | 143 |
Msa0910180 | MtrunA17_Chr4g0014731 | 34.802 | 227 | 141 | 4 | 507 | 728 | 170 | 394 | 1.42e-35 | 140 |
Msa0910180 | MtrunA17_Chr1g0192151 | 34.802 | 227 | 141 | 4 | 507 | 728 | 169 | 393 | 1.42e-35 | 140 |
Msa0910180 | MtrunA17_Chr2g0277831 | 36.364 | 220 | 130 | 6 | 505 | 718 | 533 | 748 | 2.99e-35 | 144 |
Msa0910180 | MtrunA17_Chr2g0277831 | 34.603 | 315 | 176 | 10 | 504 | 804 | 242 | 540 | 5.41e-35 | 143 |
Msa0910180 | MtrunA17_Chr1g0200081 | 37.118 | 229 | 136 | 5 | 505 | 728 | 175 | 400 | 3.13e-35 | 139 |
Msa0910180 | MtrunA17_Chr3g0094871 | 36.797 | 231 | 136 | 5 | 505 | 728 | 11 | 238 | 3.24e-35 | 139 |
Msa0910180 | MtrunA17_Chr3g0108321 | 41.176 | 187 | 104 | 3 | 505 | 687 | 159 | 343 | 4.63e-35 | 137 |
Msa0910180 | MtrunA17_Chr1g0158881 | 40.164 | 244 | 133 | 8 | 491 | 729 | 316 | 551 | 5.76e-35 | 142 |
Msa0910180 | MtrunA17_Chr2g0327231 | 41.718 | 163 | 91 | 3 | 505 | 665 | 346 | 506 | 4.80e-34 | 137 |
Msa0910180 | MtrunA17_Chr2g0327231 | 44.444 | 90 | 46 | 1 | 505 | 594 | 153 | 238 | 9.24e-15 | 77.8 |
Msa0910180 | MtrunA17_Chr7g0260601 | 37.069 | 232 | 135 | 6 | 505 | 728 | 240 | 468 | 5.80e-34 | 139 |
Msa0910180 | MtrunA17_Chr3g0086411 | 33.191 | 235 | 133 | 5 | 505 | 718 | 215 | 446 | 6.59e-34 | 136 |
Msa0910180 | MtrunA17_Chr3g0086411 | 28.846 | 208 | 132 | 5 | 593 | 790 | 7 | 208 | 1.55e-13 | 73.9 |
Msa0910180 | MtrunA17_Chr6g0476861 | 35.776 | 232 | 138 | 5 | 505 | 728 | 197 | 425 | 8.87e-34 | 138 |
Msa0910180 | MtrunA17_Chr4g0031821 | 36.207 | 232 | 137 | 6 | 505 | 728 | 320 | 548 | 1.49e-33 | 138 |
Msa0910180 | MtrunA17_Chr5g0432641 | 39.331 | 239 | 134 | 7 | 496 | 729 | 182 | 414 | 1.83e-33 | 137 |
Msa0910180 | MtrunA17_Chr4g0043381 | 35.965 | 228 | 136 | 5 | 509 | 731 | 841 | 1063 | 1.83e-32 | 135 |
Msa0910180 | MtrunA17_Chr3g0086401 | 35.565 | 239 | 124 | 7 | 505 | 718 | 385 | 618 | 1.11e-31 | 132 |
Msa0910180 | MtrunA17_Chr3g0086401 | 36.039 | 308 | 164 | 12 | 500 | 790 | 87 | 378 | 1.34e-29 | 125 |
Msa0910180 | MtrunA17_Chr3g0129971 | 35.379 | 277 | 161 | 8 | 494 | 755 | 284 | 557 | 2.75e-31 | 131 |
Msa0910180 | MtrunA17_Chr7g0255691 | 37.069 | 232 | 139 | 4 | 505 | 731 | 286 | 515 | 3.94e-30 | 126 |
Msa0910180 | MtrunA17_Chr7g0255691 | 30.822 | 292 | 165 | 7 | 520 | 804 | 32 | 293 | 2.32e-27 | 117 |
Msa0910180 | MtrunA17_Chr2g0331161 | 34.764 | 233 | 142 | 7 | 503 | 729 | 413 | 641 | 6.62e-30 | 127 |
Msa0910180 | MtrunA17_Chr2g0289231 | 31.687 | 243 | 152 | 6 | 505 | 738 | 297 | 534 | 1.05e-29 | 125 |
Msa0910180 | MtrunA17_Chr8g0388371 | 35.146 | 239 | 139 | 5 | 504 | 729 | 403 | 638 | 3.05e-29 | 125 |
Msa0910180 | MtrunA17_Chr2g0316851 | 31.174 | 247 | 150 | 7 | 507 | 737 | 596 | 838 | 1.82e-28 | 123 |
Msa0910180 | MtrunA17_Chr8g0357301 | 32.364 | 275 | 155 | 10 | 497 | 749 | 459 | 724 | 9.72e-27 | 117 |
Msa0910180 | MtrunA17_Chr3g0135781 | 40.000 | 170 | 94 | 5 | 499 | 666 | 49 | 212 | 3.22e-26 | 107 |
Msa0910180 | MtrunA17_Chr1g0168321 | 36.129 | 155 | 89 | 5 | 582 | 728 | 203 | 355 | 3.36e-19 | 92.0 |
Msa0910180 | MtrunA17_Chr4g0047411 | 33.333 | 213 | 116 | 8 | 539 | 730 | 210 | 417 | 7.81e-19 | 91.7 |
Msa0910180 | MtrunA17_Chr1g0190401 | 30.224 | 268 | 154 | 10 | 473 | 725 | 657 | 906 | 1.01e-18 | 91.7 |
Msa0910180 | MtrunA17_Chr4g0062081 | 46.988 | 83 | 43 | 1 | 504 | 585 | 6 | 88 | 8.57e-17 | 76.6 |
Msa0910180 | MtrunA17_Chr6g0450161 | 28.846 | 208 | 115 | 6 | 541 | 721 | 362 | 563 | 5.03e-15 | 79.0 |
Msa0910180 | MtrunA17_Chr4g0039781 | 29.187 | 209 | 114 | 6 | 541 | 721 | 368 | 570 | 1.13e-14 | 78.2 |
Msa0910180 | MtrunA17_Chr5g0432391 | 36.242 | 149 | 87 | 5 | 584 | 728 | 82 | 226 | 2.02e-14 | 76.6 |
Msa0910180 | MtrunA17_Chr5g0404291 | 29.902 | 204 | 111 | 6 | 541 | 718 | 387 | 584 | 7.28e-14 | 75.5 |
Msa0910180 | MtrunA17_Chr3g0116941 | 30.909 | 165 | 95 | 4 | 543 | 690 | 197 | 359 | 2.76e-13 | 73.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0910180 | AT4G28000.2 | 69.487 | 839 | 228 | 10 | 1 | 818 | 1 | 832 | 0.0 | 1125 |
Msa0910180 | AT4G28000.1 | 69.534 | 837 | 229 | 10 | 1 | 818 | 1 | 830 | 0.0 | 1124 |
Msa0910180 | AT5G52882.1 | 69.690 | 838 | 225 | 11 | 1 | 818 | 1 | 829 | 0.0 | 1107 |
Msa0910180 | AT1G64110.5 | 67.143 | 840 | 241 | 12 | 1 | 818 | 1 | 827 | 0.0 | 1086 |
Msa0910180 | AT1G64110.3 | 67.143 | 840 | 241 | 12 | 1 | 818 | 1 | 827 | 0.0 | 1086 |
Msa0910180 | AT1G64110.2 | 66.865 | 839 | 247 | 11 | 1 | 818 | 1 | 829 | 0.0 | 1084 |
Msa0910180 | AT1G64110.4 | 66.865 | 839 | 247 | 11 | 1 | 818 | 1 | 829 | 0.0 | 1084 |
Msa0910180 | AT1G64110.1 | 66.789 | 816 | 240 | 11 | 24 | 818 | 19 | 824 | 0.0 | 1080 |
Msa0910180 | AT4G28000.3 | 68.991 | 803 | 221 | 10 | 1 | 782 | 1 | 796 | 0.0 | 1062 |
Msa0910180 | AT1G02890.1 | 43.891 | 622 | 253 | 10 | 238 | 818 | 680 | 1246 | 3.29e-162 | 504 |
Msa0910180 | AT1G02890.1 | 38.462 | 91 | 53 | 2 | 49 | 136 | 422 | 512 | 9.47e-12 | 69.7 |
Msa0910180 | AT4G02480.1 | 44.444 | 621 | 250 | 11 | 238 | 818 | 700 | 1265 | 2.58e-158 | 494 |
Msa0910180 | AT4G02480.1 | 41.489 | 94 | 46 | 3 | 49 | 136 | 444 | 534 | 1.04e-12 | 72.8 |
Msa0910180 | AT1G02890.2 | 40.836 | 622 | 244 | 11 | 238 | 818 | 680 | 1218 | 7.04e-140 | 444 |
Msa0910180 | AT1G02890.2 | 38.462 | 91 | 53 | 2 | 49 | 136 | 422 | 512 | 9.09e-12 | 69.7 |
Msa0910180 | AT4G24860.4 | 42.140 | 598 | 267 | 9 | 239 | 817 | 557 | 1094 | 1.78e-138 | 438 |
Msa0910180 | AT4G24860.4 | 45.556 | 90 | 47 | 1 | 49 | 136 | 299 | 388 | 1.59e-15 | 81.6 |
Msa0910180 | AT4G24860.2 | 42.140 | 598 | 267 | 9 | 239 | 817 | 580 | 1117 | 2.21e-138 | 438 |
Msa0910180 | AT4G24860.2 | 45.556 | 90 | 47 | 1 | 49 | 136 | 299 | 388 | 1.85e-15 | 81.6 |
Msa0910180 | AT4G24860.1 | 42.140 | 598 | 267 | 9 | 239 | 817 | 584 | 1121 | 2.79e-138 | 438 |
Msa0910180 | AT4G24860.1 | 45.556 | 90 | 47 | 1 | 49 | 136 | 290 | 379 | 1.84e-15 | 81.6 |
Msa0910180 | AT4G24860.3 | 42.617 | 596 | 265 | 10 | 239 | 817 | 584 | 1119 | 2.85e-138 | 438 |
Msa0910180 | AT4G24860.3 | 45.556 | 90 | 47 | 1 | 49 | 136 | 290 | 379 | 1.79e-15 | 81.6 |
Msa0910180 | AT3G19740.1 | 41.292 | 511 | 231 | 6 | 308 | 816 | 550 | 993 | 1.82e-120 | 388 |
Msa0910180 | AT1G50140.2 | 41.142 | 508 | 230 | 7 | 311 | 816 | 541 | 981 | 1.85e-116 | 377 |
Msa0910180 | AT1G50140.5 | 41.142 | 508 | 230 | 7 | 311 | 816 | 541 | 981 | 1.85e-116 | 377 |
Msa0910180 | AT1G50140.3 | 41.142 | 508 | 230 | 7 | 311 | 816 | 563 | 1003 | 3.03e-116 | 377 |
Msa0910180 | AT1G50140.1 | 41.142 | 508 | 230 | 7 | 311 | 816 | 563 | 1003 | 3.03e-116 | 377 |
Msa0910180 | AT1G50140.4 | 41.142 | 508 | 230 | 7 | 311 | 816 | 563 | 1003 | 3.03e-116 | 377 |
Msa0910180 | AT1G62130.1 | 38.185 | 584 | 277 | 12 | 239 | 818 | 540 | 1043 | 2.69e-114 | 372 |
Msa0910180 | AT1G62130.1 | 43.478 | 92 | 48 | 2 | 49 | 136 | 298 | 389 | 1.42e-14 | 78.6 |
Msa0910180 | AT1G62130.2 | 38.185 | 584 | 277 | 12 | 239 | 818 | 533 | 1036 | 3.90e-114 | 372 |
Msa0910180 | AT1G62130.2 | 43.478 | 92 | 48 | 2 | 49 | 136 | 298 | 389 | 1.49e-14 | 78.6 |
Msa0910180 | AT4G27680.1 | 52.157 | 255 | 119 | 3 | 484 | 736 | 60 | 313 | 8.60e-82 | 268 |
Msa0910180 | AT5G53540.1 | 51.190 | 252 | 120 | 3 | 487 | 736 | 66 | 316 | 9.21e-80 | 263 |
Msa0910180 | AT2G45500.4 | 40.575 | 313 | 156 | 7 | 471 | 756 | 45 | 354 | 1.19e-66 | 226 |
Msa0910180 | AT2G45500.3 | 40.575 | 313 | 156 | 7 | 471 | 756 | 45 | 354 | 1.19e-66 | 226 |
Msa0910180 | AT2G45500.2 | 43.561 | 264 | 142 | 5 | 471 | 730 | 178 | 438 | 2.62e-65 | 226 |
Msa0910180 | AT2G45500.1 | 43.561 | 264 | 142 | 5 | 471 | 730 | 182 | 442 | 2.83e-65 | 226 |
Msa0910180 | AT2G45500.5 | 40.575 | 313 | 156 | 7 | 471 | 756 | 188 | 497 | 4.34e-65 | 226 |
Msa0910180 | AT3G27120.1 | 40.541 | 333 | 159 | 9 | 485 | 804 | 370 | 676 | 7.10e-65 | 230 |
Msa0910180 | AT1G80350.1 | 37.994 | 329 | 175 | 7 | 483 | 804 | 215 | 521 | 4.29e-63 | 221 |
Msa0910180 | AT2G34560.1 | 47.137 | 227 | 115 | 4 | 505 | 728 | 100 | 324 | 1.74e-58 | 204 |
Msa0910180 | AT2G34560.2 | 47.137 | 227 | 115 | 4 | 505 | 728 | 109 | 333 | 2.32e-58 | 204 |
Msa0910180 | AT2G27600.1 | 46.053 | 228 | 117 | 4 | 505 | 729 | 129 | 353 | 5.38e-57 | 202 |
Msa0910180 | AT3G53230.1 | 38.554 | 249 | 142 | 6 | 505 | 748 | 478 | 720 | 5.95e-47 | 180 |
Msa0910180 | AT3G53230.1 | 39.300 | 257 | 147 | 5 | 505 | 758 | 205 | 455 | 7.74e-45 | 174 |
Msa0910180 | AT5G03340.1 | 34.098 | 305 | 188 | 5 | 505 | 804 | 477 | 773 | 1.51e-45 | 176 |
Msa0910180 | AT5G03340.1 | 39.300 | 257 | 147 | 5 | 505 | 758 | 204 | 454 | 1.71e-44 | 172 |
Msa0910180 | AT3G09840.1 | 34.641 | 306 | 185 | 6 | 505 | 804 | 477 | 773 | 7.07e-45 | 174 |
Msa0910180 | AT3G09840.1 | 41.667 | 228 | 127 | 4 | 505 | 729 | 204 | 428 | 2.67e-44 | 172 |
Msa0910180 | AT2G26140.1 | 43.404 | 235 | 122 | 7 | 496 | 725 | 215 | 443 | 4.93e-42 | 164 |
Msa0910180 | AT1G45000.1 | 37.313 | 268 | 151 | 9 | 499 | 756 | 133 | 393 | 7.32e-42 | 158 |
Msa0910180 | AT5G43010.1 | 37.218 | 266 | 154 | 8 | 499 | 756 | 133 | 393 | 8.62e-42 | 158 |
Msa0910180 | AT3G56690.1 | 36.496 | 274 | 160 | 7 | 471 | 735 | 685 | 953 | 3.73e-41 | 163 |
Msa0910180 | AT3G56690.1 | 35.176 | 199 | 122 | 4 | 539 | 733 | 415 | 610 | 5.41e-32 | 134 |
Msa0910180 | AT3G01610.2 | 34.076 | 314 | 184 | 7 | 504 | 804 | 229 | 532 | 1.13e-40 | 161 |
Msa0910180 | AT3G01610.2 | 36.555 | 238 | 143 | 5 | 505 | 738 | 525 | 758 | 4.10e-33 | 137 |
Msa0910180 | AT3G01610.1 | 34.076 | 314 | 184 | 7 | 504 | 804 | 229 | 532 | 1.29e-40 | 161 |
Msa0910180 | AT3G01610.1 | 36.555 | 238 | 143 | 5 | 505 | 738 | 525 | 758 | 4.32e-33 | 137 |
Msa0910180 | AT5G42270.1 | 40.083 | 242 | 133 | 7 | 502 | 734 | 244 | 482 | 4.78e-39 | 155 |
Msa0910180 | AT1G50250.1 | 40.083 | 242 | 133 | 7 | 502 | 734 | 256 | 494 | 6.88e-39 | 155 |
Msa0910180 | AT3G47060.1 | 41.410 | 227 | 122 | 5 | 505 | 723 | 322 | 545 | 1.08e-38 | 155 |
Msa0910180 | AT5G58290.1 | 36.522 | 230 | 139 | 4 | 505 | 729 | 152 | 379 | 3.48e-38 | 147 |
Msa0910180 | AT2G30950.1 | 41.778 | 225 | 123 | 6 | 504 | 723 | 223 | 444 | 7.28e-38 | 151 |
Msa0910180 | AT2G30950.2 | 41.778 | 225 | 123 | 6 | 504 | 723 | 223 | 444 | 7.28e-38 | 151 |
Msa0910180 | AT2G30950.3 | 41.778 | 225 | 123 | 6 | 504 | 723 | 223 | 444 | 7.28e-38 | 151 |
Msa0910180 | AT2G30950.4 | 41.778 | 225 | 123 | 6 | 504 | 723 | 227 | 448 | 7.98e-38 | 151 |
Msa0910180 | AT5G19990.2 | 38.095 | 231 | 133 | 6 | 506 | 729 | 101 | 328 | 9.28e-38 | 145 |
Msa0910180 | AT5G19990.1 | 38.095 | 231 | 133 | 6 | 506 | 729 | 159 | 386 | 9.42e-38 | 147 |
Msa0910180 | AT5G19990.3 | 38.095 | 231 | 133 | 6 | 506 | 729 | 159 | 386 | 9.42e-38 | 147 |
Msa0910180 | AT5G20000.1 | 38.095 | 231 | 133 | 6 | 506 | 729 | 159 | 386 | 9.97e-38 | 147 |
Msa0910180 | AT4G29040.1 | 35.628 | 247 | 150 | 5 | 506 | 746 | 186 | 429 | 1.31e-37 | 147 |
Msa0910180 | AT5G15250.1 | 41.333 | 225 | 124 | 6 | 504 | 723 | 220 | 441 | 1.87e-37 | 150 |
Msa0910180 | AT2G20140.1 | 35.968 | 253 | 145 | 6 | 506 | 744 | 186 | 435 | 2.12e-37 | 146 |
Msa0910180 | AT1G03000.1 | 35.060 | 251 | 155 | 7 | 505 | 749 | 655 | 903 | 2.40e-37 | 151 |
Msa0910180 | AT1G06430.1 | 41.333 | 225 | 124 | 6 | 504 | 723 | 216 | 437 | 4.03e-37 | 149 |
Msa0910180 | AT1G06430.3 | 41.333 | 225 | 124 | 6 | 504 | 723 | 216 | 437 | 4.03e-37 | 149 |
Msa0910180 | AT1G06430.2 | 41.333 | 225 | 124 | 6 | 504 | 723 | 216 | 437 | 4.03e-37 | 149 |
Msa0910180 | AT5G58870.1 | 40.529 | 227 | 124 | 5 | 505 | 723 | 326 | 549 | 4.25e-37 | 150 |
Msa0910180 | AT1G53750.1 | 37.118 | 229 | 137 | 4 | 505 | 728 | 165 | 391 | 6.52e-37 | 144 |
Msa0910180 | AT3G05530.1 | 35.683 | 227 | 139 | 4 | 507 | 728 | 170 | 394 | 4.11e-36 | 142 |
Msa0910180 | AT5G53170.1 | 40.574 | 244 | 132 | 8 | 491 | 729 | 346 | 581 | 9.45e-36 | 145 |
Msa0910180 | AT1G53780.1 | 37.333 | 225 | 130 | 5 | 506 | 723 | 338 | 558 | 3.63e-35 | 142 |
Msa0910180 | AT1G53780.4 | 37.333 | 225 | 130 | 5 | 506 | 723 | 338 | 558 | 3.63e-35 | 142 |
Msa0910180 | AT1G53780.3 | 37.333 | 225 | 130 | 5 | 506 | 723 | 337 | 557 | 4.09e-35 | 142 |
Msa0910180 | AT1G53780.2 | 37.333 | 225 | 130 | 5 | 506 | 723 | 359 | 579 | 4.23e-35 | 142 |
Msa0910180 | AT1G05910.1 | 38.655 | 238 | 134 | 6 | 505 | 733 | 378 | 612 | 8.53e-35 | 144 |
Msa0910180 | AT1G09100.1 | 35.088 | 228 | 139 | 5 | 507 | 728 | 169 | 393 | 2.33e-34 | 137 |
Msa0910180 | AT5G08470.3 | 35.865 | 237 | 142 | 5 | 507 | 738 | 834 | 1065 | 3.51e-34 | 141 |
Msa0910180 | AT5G08470.1 | 35.865 | 237 | 142 | 5 | 507 | 738 | 843 | 1074 | 3.70e-34 | 141 |
Msa0910180 | AT5G15250.2 | 37.500 | 248 | 124 | 7 | 504 | 723 | 220 | 464 | 7.63e-34 | 137 |
Msa0910180 | AT3G02450.1 | 37.500 | 248 | 143 | 6 | 505 | 744 | 331 | 574 | 1.05e-33 | 138 |
Msa0910180 | AT2G29080.1 | 37.611 | 226 | 131 | 6 | 505 | 723 | 319 | 541 | 1.72e-33 | 139 |
Msa0910180 | AT1G07510.1 | 36.564 | 227 | 133 | 6 | 505 | 723 | 324 | 547 | 2.35e-33 | 138 |
Msa0910180 | AT4G23940.1 | 37.238 | 239 | 134 | 5 | 504 | 729 | 426 | 661 | 2.88e-32 | 135 |
Msa0910180 | AT5G64580.1 | 35.018 | 277 | 162 | 8 | 494 | 755 | 301 | 574 | 8.57e-31 | 130 |
Msa0910180 | AT3G16290.1 | 35.193 | 233 | 141 | 7 | 503 | 729 | 405 | 633 | 2.52e-30 | 129 |
Msa0910180 | AT4G04180.1 | 32.500 | 240 | 148 | 6 | 505 | 735 | 316 | 550 | 1.28e-29 | 125 |
Msa0910180 | AT4G04180.2 | 32.500 | 240 | 148 | 6 | 505 | 735 | 311 | 545 | 1.39e-29 | 125 |
Msa0910180 | AT3G15120.1 | 33.603 | 247 | 145 | 8 | 492 | 723 | 698 | 940 | 1.50e-28 | 124 |
Msa0910180 | AT3G15120.2 | 33.603 | 247 | 145 | 8 | 492 | 723 | 708 | 950 | 1.53e-28 | 124 |
Msa0910180 | AT2G03670.1 | 36.975 | 238 | 132 | 5 | 505 | 731 | 283 | 513 | 4.86e-28 | 120 |
Msa0910180 | AT2G03670.1 | 32.422 | 256 | 159 | 6 | 498 | 741 | 12 | 265 | 1.07e-25 | 113 |
Msa0910180 | AT2G03670.2 | 33.333 | 246 | 150 | 6 | 498 | 731 | 12 | 255 | 1.81e-26 | 113 |
Msa0910180 | AT2G03670.2 | 38.889 | 144 | 75 | 2 | 505 | 640 | 283 | 421 | 7.13e-16 | 81.3 |
Msa0910180 | AT1G45000.2 | 41.096 | 146 | 77 | 5 | 499 | 640 | 133 | 273 | 7.66e-25 | 107 |
Msa0910180 | AT1G79560.2 | 34.466 | 206 | 106 | 7 | 542 | 729 | 526 | 720 | 1.55e-24 | 110 |
Msa0910180 | AT1G79560.1 | 34.466 | 206 | 106 | 7 | 542 | 729 | 526 | 720 | 1.56e-24 | 110 |
Msa0910180 | AT1G79560.3 | 34.466 | 206 | 106 | 7 | 542 | 729 | 526 | 720 | 1.63e-24 | 110 |
Msa0910180 | AT4G04910.1 | 34.742 | 213 | 113 | 9 | 539 | 730 | 247 | 454 | 1.55e-19 | 94.4 |
Msa0910180 | AT5G08470.2 | 34.667 | 150 | 91 | 3 | 507 | 654 | 843 | 987 | 2.35e-19 | 94.0 |
Msa0910180 | AT3G04340.1 | 29.412 | 238 | 143 | 8 | 491 | 716 | 774 | 998 | 1.19e-16 | 85.5 |
Msa0910180 | AT5G16930.1 | 29.224 | 219 | 101 | 7 | 541 | 721 | 397 | 599 | 7.44e-15 | 79.0 |
Msa0910180 | AT3G03060.1 | 28.440 | 218 | 104 | 6 | 541 | 721 | 385 | 587 | 4.01e-14 | 76.6 |
Msa0910180 | AT2G18330.1 | 27.700 | 213 | 114 | 6 | 541 | 719 | 384 | 590 | 2.28e-13 | 74.3 |
Msa0910180 | AT4G36580.1 | 31.250 | 144 | 91 | 4 | 541 | 682 | 381 | 518 | 1.69e-11 | 68.2 |
Find 166 sgRNAs with CRISPR-Local
Find 351 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTCATGTCTTCCATACTTAA+AGG | 0.156285 | 6_2:+13819258 | None:intergenic |
AAAGGCCTCAAGATGATTTC+TGG | 0.173349 | 6_2:+13819276 | None:intergenic |
GATTCCCTCCAACCCATTTC+TGG | 0.189501 | 6_2:+13824289 | None:intergenic |
GTGAAATGCTAATTTCATTT+TGG | 0.190249 | 6_2:-13818791 | Msa0910180:three_prime_UTR |
CGCGATATCGATGAGGTTTC+TGG | 0.190695 | 6_2:-13824267 | Msa0910180:CDS |
CTGTTTCTGGAGGGTCTTAA+AGG | 0.201924 | 6_2:-13824417 | Msa0910180:five_prime_UTR |
ATTGTTCCAGAAAATGATTC+TGG | 0.257437 | 6_2:+13824467 | None:intergenic |
CATCTTGAGGCCTTTAAGTA+TGG | 0.262573 | 6_2:-13819268 | Msa0910180:CDS |
TTCCACTACTCTTGCCTTCC+TGG | 0.264777 | 6_2:+13821409 | None:intergenic |
GGAACAATTCTTATACCTTT+TGG | 0.265596 | 6_2:-13824452 | Msa0910180:five_prime_UTR |
AGAACAAGAATTTGTTCATT+AGG | 0.265912 | 6_2:+13820432 | None:intergenic |
ACTTTGATCTCAATGTTATA+AGG | 0.277506 | 6_2:+13821816 | None:intergenic |
CATTGGGATGGACTATTATC+TGG | 0.315982 | 6_2:-13820456 | Msa0910180:CDS |
TTACAACATATCTAAAGTTT+TGG | 0.319613 | 6_2:+13818542 | None:intergenic |
CTCAAGAGACTTGTTGTTGA+TGG | 0.320621 | 6_2:-13824225 | Msa0910180:CDS |
GTACAGTTGCAAAGCAGATT+TGG | 0.324617 | 6_2:-13822651 | Msa0910180:intron |
AGAATATGATTGCAAAGAAT+TGG | 0.327848 | 6_2:-13821862 | Msa0910180:CDS |
TGCTGTATTAACTCCCTTAC+AGG | 0.329399 | 6_2:+13819473 | None:intergenic |
CGCTTCTCGAACTCGTTGTC+CGG | 0.334969 | 6_2:+13820909 | None:intergenic |
TCAGGGATTGAGTCTGTTCC+AGG | 0.345579 | 6_2:-13821427 | Msa0910180:CDS |
TTGAGTGTTGGTGTTGGATT+AGG | 0.352827 | 6_2:-13824345 | Msa0910180:CDS |
CTTTGATCTCAATGTTATAA+GGG | 0.357775 | 6_2:+13821817 | None:intergenic |
CGTTACAGGGATAGATTTCT+CGG | 0.365008 | 6_2:+13821052 | None:intergenic |
CTGGACAAGCTGTCCAGAAA+TGG | 0.368219 | 6_2:-13824302 | Msa0910180:CDS |
GTTGGACTTGGATTGAGTTC+TGG | 0.368529 | 6_2:-13824321 | Msa0910180:CDS |
GTAACACCTATCTCATTTGC+AGG | 0.369133 | 6_2:+13820867 | None:intergenic |
TATATGCTTGCAGGAAGTTC+CGG | 0.375272 | 6_2:-13820928 | Msa0910180:intron |
AGAATGATAAATAAATTATC+AGG | 0.377788 | 6_2:-13821921 | Msa0910180:CDS |
CCGAGATGAGTTTCATCTTC+GGG | 0.378569 | 6_2:+13821792 | None:intergenic |
CCAAAGATATAAAAGCTAAG+AGG | 0.379290 | 6_2:-13818688 | Msa0910180:three_prime_UTR |
TATATCTTTGGAACACTTGA+AGG | 0.383455 | 6_2:+13818700 | None:intergenic |
TTTGTTGAAATATACCCTTT+AGG | 0.383667 | 6_2:+13818753 | None:intergenic |
AACTAGTTATCTCATCTAAT+AGG | 0.390917 | 6_2:-13821545 | Msa0910180:intron |
CAATGTGGACAGTTTGTCTC+AGG | 0.398322 | 6_2:-13821445 | Msa0910180:intron |
GAAGTAATGTGCTAAAGCTT+TGG | 0.401980 | 6_2:+13822803 | None:intergenic |
GTTATTATTTGAAGCATCTT+CGG | 0.409808 | 6_2:+13819311 | None:intergenic |
ACACGAAAACTTGGACTTCA+AGG | 0.412437 | 6_2:-13819645 | Msa0910180:CDS |
TGTCCACCATCACTTCAAAA+TGG | 0.416441 | 6_2:-13820638 | Msa0910180:CDS |
TGGATTTGTAGAACCACTTT+GGG | 0.422604 | 6_2:+13822302 | None:intergenic |
TTACCATTTGATGACTACTA+AGG | 0.424622 | 6_2:-13821589 | Msa0910180:CDS |
ATGACTTTGGAACGAATGTC+TGG | 0.424693 | 6_2:-13822465 | Msa0910180:CDS |
CTGGATTTGTAGAACCACTT+TGG | 0.424984 | 6_2:+13822301 | None:intergenic |
GAACGAATGTCTGGTTTGTT+TGG | 0.429036 | 6_2:-13822456 | Msa0910180:CDS |
TAATAATCTTCTAATACAAT+TGG | 0.432943 | 6_2:+13818628 | None:intergenic |
GAAAATGTTGACGATATTGC+CGG | 0.435344 | 6_2:-13821128 | Msa0910180:CDS |
TCTTCCATCTGCTGAGAATA+GGG | 0.436797 | 6_2:-13819702 | Msa0910180:CDS |
AAATGAATTCATGACACATT+GGG | 0.437919 | 6_2:-13820472 | Msa0910180:CDS |
GTTGGATTAGGTGTTGGACT+TGG | 0.438941 | 6_2:-13824333 | Msa0910180:CDS |
TTTGACACCAACGTTGTCTT+CGG | 0.444265 | 6_2:-13824540 | Msa0910180:five_prime_UTR |
GTCTTCCATCTGCTGAGAAT+AGG | 0.445088 | 6_2:-13819703 | Msa0910180:CDS |
CAAAGTGGTTCTACAAATCC+AGG | 0.445389 | 6_2:-13822300 | Msa0910180:intron |
TGTACGGCGAAGGCGGTTCA+AGG | 0.446430 | 6_2:-13818848 | Msa0910180:CDS |
ATGAAACTCATCTCGGTAGC+TGG | 0.447734 | 6_2:-13821785 | Msa0910180:CDS |
CATGAAACAAGCTAAGAATC+AGG | 0.448416 | 6_2:-13819241 | Msa0910180:intron |
TTTATTGTTGAGCAGGATCA+TGG | 0.455341 | 6_2:-13819729 | Msa0910180:intron |
AGTAAAATAGCCCTGCTTGC+CGG | 0.457963 | 6_2:+13822964 | None:intergenic |
TTTGTCACATATATCCTAAA+GGG | 0.458879 | 6_2:-13818767 | Msa0910180:three_prime_UTR |
ACCGAGATGAGTTTCATCTT+CGG | 0.462511 | 6_2:+13821791 | None:intergenic |
ATCCCTTATGTATAAAATGA+TGG | 0.462540 | 6_2:+13821992 | None:intergenic |
ATGAGTTTCCTTATTACCTA+AGG | 0.463467 | 6_2:-13824179 | Msa0910180:intron |
TGCTTCATTCGCAATCGCCT+TGG | 0.464021 | 6_2:+13820686 | None:intergenic |
GTTATCCCTGCAAATGAGAT+AGG | 0.467844 | 6_2:-13820873 | Msa0910180:CDS |
TGAGAGGTTTCTTGTGTGCT+TGG | 0.469934 | 6_2:+13822987 | None:intergenic |
GATAAATAAATTATCAGGTT+CGG | 0.471190 | 6_2:-13821916 | Msa0910180:CDS |
AAAGGAGAAACACGAAAACT+TGG | 0.474800 | 6_2:-13819654 | Msa0910180:CDS |
GTCAATATCCGAGATGACTT+TGG | 0.475208 | 6_2:-13822478 | Msa0910180:CDS |
CCTCTAGTTTCACCGGTTGA+AGG | 0.476239 | 6_2:+13822417 | None:intergenic |
GAAACCTCTCACCGGCAAGC+AGG | 0.479995 | 6_2:-13822975 | Msa0910180:CDS |
ATTTGTCACATATATCCTAA+AGG | 0.480477 | 6_2:-13818768 | Msa0910180:three_prime_UTR |
ATCGCTTCATCAAGATCAAA+TGG | 0.480594 | 6_2:+13820393 | None:intergenic |
ATTCGCAGACATCGGTGCAT+TGG | 0.482826 | 6_2:-13820844 | Msa0910180:CDS |
GTTGGTGTTGGATTAGGTGT+TGG | 0.483479 | 6_2:-13824339 | Msa0910180:CDS |
GCATTCCTCCGTAGCCTTGG+AGG | 0.483535 | 6_2:+13822357 | None:intergenic |
TGAAGAGGTCTGGTCTCCTA+AGG | 0.485467 | 6_2:+13820781 | None:intergenic |
TGTAGTAAATTAAATAACCT+TGG | 0.491357 | 6_2:+13821945 | None:intergenic |
ACCATCACTTCAAAATGGTT+CGG | 0.491372 | 6_2:-13820633 | Msa0910180:CDS |
TGGACAAGCTGTCCAGAAAT+GGG | 0.491969 | 6_2:-13824301 | Msa0910180:CDS |
AAGGCGATTGCGAATGAAGC+AGG | 0.496258 | 6_2:-13820684 | Msa0910180:CDS |
CTGCGGCTTATCGACCTGTA+AGG | 0.497062 | 6_2:-13819487 | Msa0910180:CDS |
GTTCCTTAGTAGTCATCAAA+TGG | 0.500837 | 6_2:+13821586 | None:intergenic |
GAGGCATTCCTCCGTAGCCT+TGG | 0.501564 | 6_2:+13822354 | None:intergenic |
AGCTAGTAATGCTTCCCCTT+AGG | 0.503492 | 6_2:-13820797 | Msa0910180:CDS |
AGTCCACCTTTGAAGAGGTC+TGG | 0.503700 | 6_2:+13820771 | None:intergenic |
TTTGTTCACGCTAGCAGCTA+AGG | 0.504388 | 6_2:-13820586 | Msa0910180:CDS |
AATATAGTTACTAAGTATCA+TGG | 0.507857 | 6_2:+13821638 | None:intergenic |
CGAATAATCCTCCAAGGCTA+CGG | 0.511174 | 6_2:-13822365 | Msa0910180:CDS |
TTATACGACGGTTCGAGCGC+AGG | 0.512691 | 6_2:-13820371 | Msa0910180:intron |
ACCATGACAGAAGGATTTAG+TGG | 0.514138 | 6_2:-13819614 | Msa0910180:CDS |
CCTCACATCATTCTTTGCGC+CGG | 0.514346 | 6_2:+13821109 | None:intergenic |
GGTTGAAGGCGTCATTGAAA+AGG | 0.514365 | 6_2:+13822431 | None:intergenic |
AAAATGAATTCATGACACAT+TGG | 0.516818 | 6_2:-13820473 | Msa0910180:CDS |
ATTTCCCTATTCTCAGCAGA+TGG | 0.517657 | 6_2:+13819698 | None:intergenic |
TCAGCATTGAGTGTTGGTGT+TGG | 0.519229 | 6_2:-13824351 | Msa0910180:CDS |
TGTAGAGGTATATTACTCTT+CGG | 0.523785 | 6_2:-13820738 | Msa0910180:CDS |
TCAGGTTCGGTGTTGATACT+CGG | 0.524130 | 6_2:-13821903 | Msa0910180:CDS |
CTCTTCGGTCCACCTGGTAC+CGG | 0.524265 | 6_2:-13820723 | Msa0910180:CDS |
ATTTAGTGGAAGTGATCTAA+AGG | 0.528579 | 6_2:-13819600 | Msa0910180:intron |
CAAAGATATAAAAGCTAAGA+GGG | 0.531100 | 6_2:-13818687 | Msa0910180:three_prime_UTR |
TTGCAAAGAATTGGATGAAA+GGG | 0.533277 | 6_2:-13821853 | Msa0910180:CDS |
TGCATCAGAAGGTTCAGTAA+TGG | 0.535925 | 6_2:-13818895 | Msa0910180:CDS |
ATCAAGATCAAATGGTCTGT+TGG | 0.536190 | 6_2:+13820401 | None:intergenic |
TCCACTAAATCCTTCTGTCA+TGG | 0.536524 | 6_2:+13819613 | None:intergenic |
ATTGCAAAGAATTGGATGAA+AGG | 0.538974 | 6_2:-13821854 | Msa0910180:CDS |
CCTTAAAACTCTTATGTCAA+AGG | 0.539255 | 6_2:-13819672 | Msa0910180:CDS |
CAAAGTACCTCTAGTTTCAC+CGG | 0.539464 | 6_2:+13822410 | None:intergenic |
TCATTTGCAGGGATAACCTC+TGG | 0.541654 | 6_2:+13820879 | None:intergenic |
ACTCATCTCGGTAGCTGGAA+AGG | 0.546433 | 6_2:-13821780 | Msa0910180:CDS |
TGTTACTGATTTCTCTGTGA+AGG | 0.546550 | 6_2:-13822757 | Msa0910180:intron |
CTGCTAGCGTGAACAAAGCT+CGG | 0.548824 | 6_2:+13820592 | None:intergenic |
AAACCTCTCACCGGCAAGCA+GGG | 0.550772 | 6_2:-13822974 | Msa0910180:CDS |
CATCAAATGGTAAGAAATTG+CGG | 0.550828 | 6_2:+13821599 | None:intergenic |
AGTAGCACTTCTTCCCAAAG+TGG | 0.551337 | 6_2:-13822315 | Msa0910180:CDS |
CAAGCTGTCCAGAAATGGGT+TGG | 0.554692 | 6_2:-13824297 | Msa0910180:CDS |
TAGCCCTGCTTGCCGGTGAG+AGG | 0.558044 | 6_2:+13822971 | None:intergenic |
GATGAAGTTGACAGCATGCT+CGG | 0.560044 | 6_2:-13820540 | Msa0910180:CDS |
GAAGAGGTCTGGTCTCCTAA+GGG | 0.560343 | 6_2:+13820782 | None:intergenic |
CTGTCCAGAAATGGGTTGGA+GGG | 0.561405 | 6_2:-13824293 | Msa0910180:CDS |
TTGTTGAGCAGGATCATGGT+TGG | 0.570569 | 6_2:-13819725 | Msa0910180:intron |
TTCCAGGAAGGCAAGAGTAG+TGG | 0.572341 | 6_2:-13821411 | Msa0910180:CDS |
AATTGGATGAAAGGGTCGCT+AGG | 0.573099 | 6_2:-13821845 | Msa0910180:CDS |
GCTGTCCAGAAATGGGTTGG+AGG | 0.574922 | 6_2:-13824294 | Msa0910180:CDS |
ATATCTTTGGAACACTTGAA+GGG | 0.575428 | 6_2:+13818701 | None:intergenic |
TGTAAGGGAGTTAATACAGC+AGG | 0.578490 | 6_2:-13819471 | Msa0910180:CDS |
TTAGAAGTCCACCTTTGAAG+AGG | 0.579176 | 6_2:+13820766 | None:intergenic |
ATATTACTCTTCGGTCCACC+TGG | 0.580870 | 6_2:-13820729 | Msa0910180:CDS |
CATTCGTTCCAAAGTCATCT+CGG | 0.581888 | 6_2:+13822470 | None:intergenic |
TGCGGCTTATCGACCTGTAA+GGG | 0.583988 | 6_2:-13819486 | Msa0910180:CDS |
GGGTATATTTCAACAAAGCA+AGG | 0.585307 | 6_2:-13818747 | Msa0910180:three_prime_UTR |
CTCGGTCAGCGTACTAGAGT+CGG | 0.585382 | 6_2:-13820522 | Msa0910180:CDS |
AAACAATGGAATGAATTGTA+CGG | 0.586269 | 6_2:-13818864 | Msa0910180:CDS |
AAGGAACCAGAATACCGAAA+CGG | 0.589801 | 6_2:-13821570 | Msa0910180:CDS |
TGGAATGAATTGTACGGCGA+AGG | 0.590358 | 6_2:-13818858 | Msa0910180:CDS |
TAATGGCTGAGCTAAAACAA+TGG | 0.592183 | 6_2:-13818878 | Msa0910180:CDS |
AATGAATTGTACGGCGAAGG+CGG | 0.593092 | 6_2:-13818855 | Msa0910180:CDS |
AATGTGGACAGTTTGTCTCA+GGG | 0.594638 | 6_2:-13821444 | Msa0910180:intron |
GAATTCATGACACATTGGGA+TGG | 0.601740 | 6_2:-13820468 | Msa0910180:CDS |
TACTAGAGTCGGAGAACATG+AGG | 0.602554 | 6_2:-13820511 | Msa0910180:CDS |
AAAATTCGAATAATCCTCCA+AGG | 0.603879 | 6_2:-13822371 | Msa0910180:CDS |
ACTTAGATCAGACGCAGCAG+AGG | 0.607845 | 6_2:+13822335 | None:intergenic |
CCCGAAGATGAAACTCATCT+CGG | 0.613969 | 6_2:-13821792 | Msa0910180:CDS |
AGGAGACCAGACCTCTTCAA+AGG | 0.619937 | 6_2:-13820777 | Msa0910180:CDS |
CCGCGAGTACTTCAGCAATG+TGG | 0.624242 | 6_2:+13821709 | None:intergenic |
GGTGTTACATTCGCAGACAT+CGG | 0.629703 | 6_2:-13820852 | Msa0910180:CDS |
GAACTAGCAACCATGACAGA+AGG | 0.634509 | 6_2:-13819623 | Msa0910180:CDS |
TCGGAGAACATGAGGCCATG+AGG | 0.634732 | 6_2:-13820503 | Msa0910180:CDS |
TCATCGACGAATATAATAGT+CGG | 0.640660 | 6_2:+13820558 | None:intergenic |
ATAATCCTCCAAGGCTACGG+AGG | 0.641401 | 6_2:-13822362 | Msa0910180:CDS |
AGACCAGACCTCTTCAAAGG+TGG | 0.645548 | 6_2:-13820774 | Msa0910180:CDS |
TAACACCTATCTCATTTGCA+GGG | 0.646749 | 6_2:+13820868 | None:intergenic |
CCTTCAACCGGTGAAACTAG+AGG | 0.647499 | 6_2:-13822417 | Msa0910180:CDS |
CCACATTGCTGAAGTACTCG+CGG | 0.647923 | 6_2:-13821709 | Msa0910180:CDS |
GGACTTCTAAAGCCATGTAG+AGG | 0.650465 | 6_2:-13820753 | Msa0910180:CDS |
CGAGAAGCGAATTAGACCAG+AGG | 0.653973 | 6_2:-13820895 | Msa0910180:CDS |
AAGAGGTCTGGTCTCCTAAG+GGG | 0.660614 | 6_2:+13820783 | None:intergenic |
ACAGAATTTGTGCATAACTG+CGG | 0.664862 | 6_2:-13819504 | Msa0910180:intron |
GCACACAAGAAACCTCTCAC+CGG | 0.666148 | 6_2:-13822983 | Msa0910180:CDS |
AAGAGTAATATACCTCTACA+TGG | 0.666188 | 6_2:+13820741 | None:intergenic |
GGATTGAGTCTGTTCCAGGA+AGG | 0.670020 | 6_2:-13821423 | Msa0910180:CDS |
GAAGACTAATGATTCTAACA+AGG | 0.670841 | 6_2:-13821382 | Msa0910180:intron |
AGCACCAGAAAATAAAAGTG+AGG | 0.671744 | 6_2:-13821075 | Msa0910180:CDS |
ATGAACCAGAAATCATCTTG+AGG | 0.676444 | 6_2:-13819281 | Msa0910180:CDS |
AGGGAATCGCGATATCGATG+AGG | 0.687029 | 6_2:-13824274 | Msa0910180:CDS |
AGCTTGTTCTCAAATCACCA+AGG | 0.697268 | 6_2:-13821962 | Msa0910180:CDS |
TTGATGAAGCGATTATACGA+CGG | 0.711157 | 6_2:-13820383 | Msa0910180:CDS |
CCGGCGCAAAGAATGATGTG+AGG | 0.713348 | 6_2:-13821109 | Msa0910180:CDS |
AAAGACTCCGAAGACAACGT+TGG | 0.719596 | 6_2:+13824533 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TATTAAAAAAAAATTACCTT+AGG | + | chr6_2:13818874-13818893 | None:intergenic | 10.0% |
!!! | TAAATTTTTAGGTTTTTTAA+TGG | + | chr6_2:13822973-13822992 | None:intergenic | 10.0% |
!! | TGTTTATAAATTATATGCTT+CGG | + | chr6_2:13819544-13819563 | None:intergenic | 15.0% |
!!! | TAATTTTTTTGTTTTGTAAC+CGG | - | chr6_2:13820305-13820324 | Msa0910180:intron | 15.0% |
!! | AGAATGATAAATAAATTATC+AGG | - | chr6_2:13821113-13821132 | Msa0910180:CDS | 15.0% |
!! | AAATAAAATAGTTTAAGTGA+AGG | - | chr6_2:13822871-13822890 | Msa0910180:intron | 15.0% |
!! | AATAAAATAGTTTAAGTGAA+GGG | - | chr6_2:13822872-13822891 | Msa0910180:intron | 15.0% |
!!! | ATAATAAAGATATCGATTTT+CGG | + | chr6_2:13822922-13822941 | None:intergenic | 15.0% |
!! | CATTCTCAATAAAAAATTTA+TGG | + | chr6_2:13823011-13823030 | None:intergenic | 15.0% |
!! | TAATAATCTTCTAATACAAT+TGG | + | chr6_2:13824409-13824428 | None:intergenic | 15.0% |
!!! | ACCAAATATTTTTGATGTTA+TGG | - | chr6_2:13818640-13818659 | Msa0910180:three_prime_UTR | 20.0% |
!! | TCCATAACATCAAAAATATT+TGG | + | chr6_2:13818644-13818663 | None:intergenic | 20.0% |
!! | AAAAATTACCTTAGGTAATA+AGG | + | chr6_2:13818866-13818885 | None:intergenic | 20.0% |
!! | TGTGTTAGTATATGATATAA+TGG | - | chr6_2:13818967-13818986 | Msa0910180:intron | 20.0% |
!! | ATATGATATAATGGTGTTTA+TGG | - | chr6_2:13818976-13818995 | Msa0910180:intron | 20.0% |
!! | ATGAAAATCTAAGAAAGATT+GGG | + | chr6_2:13819168-13819187 | None:intergenic | 20.0% |
!! | AATGAAAATCTAAGAAAGAT+TGG | + | chr6_2:13819169-13819188 | None:intergenic | 20.0% |
!! | AAGAATAGAAAATTGCAAAA+AGG | + | chr6_2:13819487-13819506 | None:intergenic | 20.0% |
!! | AGCATATAATTTATAAACAC+CGG | - | chr6_2:13819545-13819564 | Msa0910180:intron | 20.0% |
!! | ATTGAAAGCAAAAGAAAAAA+AGG | + | chr6_2:13819868-13819887 | None:intergenic | 20.0% |
!!! | TTTTCTTTTGCTTTCAATTT+AGG | - | chr6_2:13819870-13819889 | Msa0910180:intron | 20.0% |
!! | AAACAAGTATTAGTCAAAAA+AGG | + | chr6_2:13820173-13820192 | None:intergenic | 20.0% |
!! | TAAAAGTAGATCGATTATTT+GGG | + | chr6_2:13820808-13820827 | None:intergenic | 20.0% |
!! | ATAAAAGTAGATCGATTATT+TGG | + | chr6_2:13820809-13820828 | None:intergenic | 20.0% |
!!! | ATTCCATCATTTTATACATA+AGG | - | chr6_2:13821039-13821058 | Msa0910180:CDS | 20.0% |
!!! | TTCCATCATTTTATACATAA+GGG | - | chr6_2:13821040-13821059 | Msa0910180:CDS | 20.0% |
!! | TGTAGTAAATTAAATAACCT+TGG | + | chr6_2:13821092-13821111 | None:intergenic | 20.0% |
!! | GATAAATAAATTATCAGGTT+CGG | - | chr6_2:13821118-13821137 | Msa0910180:CDS | 20.0% |
!! | AATATAGTTACTAAGTATCA+TGG | + | chr6_2:13821399-13821418 | None:intergenic | 20.0% |
!! | AAATAAGCAGTATACAATTT+AGG | + | chr6_2:13822065-13822084 | None:intergenic | 20.0% |
!! | TCGATATCTTTATTATACAT+AGG | - | chr6_2:13822926-13822945 | Msa0910180:intron | 20.0% |
!! | GGATAAAGTATATAAATGAA+TGG | + | chr6_2:13823059-13823078 | None:intergenic | 20.0% |
!! | ATTATTTGAATGTGCATTTA+TGG | - | chr6_2:13823194-13823213 | Msa0910180:intron | 20.0% |
!!! | AATATTTTTTATTGTTGAGC+AGG | - | chr6_2:13823298-13823317 | Msa0910180:intron | 20.0% |
!! | TAATATCAATAACTGAGTAT+TGG | - | chr6_2:13823650-13823669 | Msa0910180:intron | 20.0% |
!!! | TTACAACATATCTAAAGTTT+TGG | + | chr6_2:13824495-13824514 | None:intergenic | 20.0% |
!!! | AAAAAAAAACTGTTTCTGGA+GGG | - | chr6_2:13818608-13818627 | Msa0910180:intron | 25.0% |
!! | AATGGTGTTTATGGTAATTT+TGG | - | chr6_2:13818985-13819004 | Msa0910180:intron | 25.0% |
!! | ATGGTGTTTATGGTAATTTT+GGG | - | chr6_2:13818986-13819005 | Msa0910180:intron | 25.0% |
!!! | TTTTAATGATGTTTGAGACA+TGG | - | chr6_2:13819009-13819028 | Msa0910180:intron | 25.0% |
!! | AATTTCATGTTCTGAATCTT+TGG | - | chr6_2:13819053-13819072 | Msa0910180:intron | 25.0% |
! | ATCTTTGGACATATAAATCT+TGG | - | chr6_2:13819068-13819087 | Msa0910180:intron | 25.0% |
! | TCTTTGGACATATAAATCTT+GGG | - | chr6_2:13819069-13819088 | Msa0910180:intron | 25.0% |
!! | GATGAATTTTCTTTGATTGT+TGG | - | chr6_2:13819114-13819133 | Msa0910180:intron | 25.0% |
!! | AATTTTCTTTGATTGTTGGT+TGG | - | chr6_2:13819118-13819137 | Msa0910180:intron | 25.0% |
! | TAATTACAGATGAATTGTTC+GGG | + | chr6_2:13819316-13819335 | None:intergenic | 25.0% |
! | CTAATTACAGATGAATTGTT+CGG | + | chr6_2:13819317-13819336 | None:intergenic | 25.0% |
!!! | TGGTTTCTTAGAGTTTTATT+TGG | - | chr6_2:13819363-13819382 | Msa0910180:intron | 25.0% |
!! | TTTTACAACTTCTATGAAGA+GGG | + | chr6_2:13819460-13819479 | None:intergenic | 25.0% |
!! | TTTTTACAACTTCTATGAAG+AGG | + | chr6_2:13819461-13819480 | None:intergenic | 25.0% |
! | TTCATATAATCTATCCAAGA+TGG | - | chr6_2:13819597-13819616 | Msa0910180:intron | 25.0% |
! | ATCTATGATTGACATAGTTT+AGG | + | chr6_2:13819926-13819945 | None:intergenic | 25.0% |
!!! | TAATCACATGTTTTTTCATC+TGG | - | chr6_2:13819950-13819969 | Msa0910180:intron | 25.0% |
! | TCTATGTATATGTATACAAC+CGG | + | chr6_2:13820327-13820346 | None:intergenic | 25.0% |
! | TGTAGTTCAAAATTATAACC+TGG | + | chr6_2:13820755-13820774 | None:intergenic | 25.0% |
! | ATGTTACCTTAACCATATTT+AGG | - | chr6_2:13820774-13820793 | Msa0910180:CDS | 25.0% |
! | ATCAAACCTAAATATGGTTA+AGG | + | chr6_2:13820783-13820802 | None:intergenic | 25.0% |
! | ATCCCTTATGTATAAAATGA+TGG | + | chr6_2:13821045-13821064 | None:intergenic | 25.0% |
! | AGAATATGATTGCAAAGAAT+TGG | - | chr6_2:13821172-13821191 | Msa0910180:intron | 25.0% |
! | CTTTGATCTCAATGTTATAA+GGG | + | chr6_2:13821220-13821239 | None:intergenic | 25.0% |
! | ACTTTGATCTCAATGTTATA+AGG | + | chr6_2:13821221-13821240 | None:intergenic | 25.0% |
! | AACTAGTTATCTCATCTAAT+AGG | - | chr6_2:13821489-13821508 | Msa0910180:intron | 25.0% |
! | AATGCAAACGAAAATATGAT+AGG | + | chr6_2:13821784-13821803 | None:intergenic | 25.0% |
!!! | CGATTTGTTTTCTTTATGTT+AGG | - | chr6_2:13821884-13821903 | Msa0910180:CDS | 25.0% |
! | AATTAATTGTATATGCTTGC+AGG | - | chr6_2:13822097-13822116 | Msa0910180:intron | 25.0% |
!!! | TTCATTTTTAATCTTCCTCA+TGG | + | chr6_2:13822549-13822568 | None:intergenic | 25.0% |
! | AAAATGAATTCATGACACAT+TGG | - | chr6_2:13822561-13822580 | Msa0910180:intron | 25.0% |
! | AAATGAATTCATGACACATT+GGG | - | chr6_2:13822562-13822581 | Msa0910180:intron | 25.0% |
!! | AGAACAAGAATTTGTTCATT+AGG | + | chr6_2:13822605-13822624 | None:intergenic | 25.0% |
! | AAAAAACTCAAGTATTCGAT+TGG | - | chr6_2:13822830-13822849 | Msa0910180:intron | 25.0% |
!! | TTTTTATTGAGAATGAAGCA+TGG | - | chr6_2:13823016-13823035 | Msa0910180:CDS | 25.0% |
! | TCAGAAAAAGAAGAAAAAAG+AGG | - | chr6_2:13823685-13823704 | Msa0910180:intron | 25.0% |
!! | GTTATTATTTGAAGCATCTT+CGG | + | chr6_2:13823726-13823745 | None:intergenic | 25.0% |
! | ACTGTCAAGTAATTAAATAG+CGG | - | chr6_2:13823847-13823866 | Msa0910180:intron | 25.0% |
! | ATATTTCATTCATGCTTCAT+CGG | - | chr6_2:13824046-13824065 | Msa0910180:intron | 25.0% |
! | AAACAATGGAATGAATTGTA+CGG | - | chr6_2:13824170-13824189 | Msa0910180:intron | 25.0% |
!! | TTAGCATTTCACACTTTTAA+AGG | + | chr6_2:13824235-13824254 | None:intergenic | 25.0% |
!! | GTGAAATGCTAATTTCATTT+TGG | - | chr6_2:13824243-13824262 | Msa0910180:CDS | 25.0% |
! | ATTTGTCACATATATCCTAA+AGG | - | chr6_2:13824266-13824285 | Msa0910180:CDS | 25.0% |
! | TTTGTCACATATATCCTAAA+GGG | - | chr6_2:13824267-13824286 | Msa0910180:CDS | 25.0% |
! | TTTGTTGAAATATACCCTTT+AGG | + | chr6_2:13824284-13824303 | None:intergenic | 25.0% |
! | CAAAGATATAAAAGCTAAGA+GGG | - | chr6_2:13824347-13824366 | Msa0910180:CDS | 25.0% |
ATTGTTCCAGAAAATGATTC+TGG | + | chr6_2:13818570-13818589 | None:intergenic | 30.0% | |
! | GGAACAATTCTTATACCTTT+TGG | - | chr6_2:13818582-13818601 | Msa0910180:three_prime_UTR | 30.0% |
!!! | CAGTTTTTTTTTGCACCAAA+AGG | + | chr6_2:13818600-13818619 | None:intergenic | 30.0% |
GTGCAAAAAAAAACTGTTTC+TGG | - | chr6_2:13818604-13818623 | Msa0910180:intron | 30.0% | |
!! | CAAAAAAAAACTGTTTCTGG+AGG | - | chr6_2:13818607-13818626 | Msa0910180:intron | 30.0% |
ATGAGTTTCCTTATTACCTA+AGG | - | chr6_2:13818855-13818874 | Msa0910180:CDS | 30.0% | |
! | AAACTCTAAGAAACCAAGTT+TGG | + | chr6_2:13819359-13819378 | None:intergenic | 30.0% |
GGCATATAATGCCATAATAA+AGG | - | chr6_2:13819384-13819403 | Msa0910180:intron | 30.0% | |
!! | CCAGATTTTAGCCTTTATTA+TGG | + | chr6_2:13819398-13819417 | None:intergenic | 30.0% |
CCATAATAAAGGCTAAAATC+TGG | - | chr6_2:13819395-13819414 | Msa0910180:intron | 30.0% | |
CTGATCTTTAAATTCCATCT+TGG | + | chr6_2:13819614-13819633 | None:intergenic | 30.0% | |
! | GTTCTCTGAAAAGCTATTAT+CGG | - | chr6_2:13819640-13819659 | Msa0910180:CDS | 30.0% |
! | TTTTTGTGTAGTGTTTCAGA+AGG | - | chr6_2:13820534-13820553 | Msa0910180:CDS | 30.0% |
AAAATTCGAATAATCCTCCA+AGG | - | chr6_2:13820663-13820682 | Msa0910180:CDS | 30.0% | |
!! | TTTTGTACAGTCACTTTACA+AGG | - | chr6_2:13820909-13820928 | Msa0910180:CDS | 30.0% |
ATTGCAAAGAATTGGATGAA+AGG | - | chr6_2:13821180-13821199 | Msa0910180:intron | 30.0% | |
TTGCAAAGAATTGGATGAAA+GGG | - | chr6_2:13821181-13821200 | Msa0910180:intron | 30.0% | |
! | TTTTCATGTCTTCTTCTAGT+TGG | + | chr6_2:13821280-13821299 | None:intergenic | 30.0% |
CATCAAATGGTAAGAAATTG+CGG | + | chr6_2:13821438-13821457 | None:intergenic | 30.0% | |
! | TTACCATTTGATGACTACTA+AGG | - | chr6_2:13821445-13821464 | Msa0910180:intron | 30.0% |
!!! | AGATAACTAGTTTTCCGTTT+CGG | + | chr6_2:13821481-13821500 | None:intergenic | 30.0% |
ACTGATCTTGTATATCAATG+TGG | - | chr6_2:13821574-13821593 | Msa0910180:CDS | 30.0% | |
GAAGACTAATGATTCTAACA+AGG | - | chr6_2:13821652-13821671 | Msa0910180:CDS | 30.0% | |
!! | ATTGATCTTACTGCTTTTAC+AGG | + | chr6_2:13822032-13822051 | None:intergenic | 30.0% |
AAGAGTAATATACCTCTACA+TGG | + | chr6_2:13822296-13822315 | None:intergenic | 30.0% | |
! | TGTAGAGGTATATTACTCTT+CGG | - | chr6_2:13822296-13822315 | Msa0910180:intron | 30.0% |
TCATCGACGAATATAATAGT+CGG | + | chr6_2:13822479-13822498 | None:intergenic | 30.0% | |
TGAATGTGACTTTGTTCTAA+TGG | + | chr6_2:13822758-13822777 | None:intergenic | 30.0% | |
GTTTAAGTGAAGGGTAAAAT+TGG | - | chr6_2:13822881-13822900 | Msa0910180:intron | 30.0% | |
CTTTATCCTTATGAGTTATG+AGG | - | chr6_2:13823071-13823090 | Msa0910180:intron | 30.0% | |
ATCCATGTGAAAAATAAGAG+TGG | + | chr6_2:13823100-13823119 | None:intergenic | 30.0% | |
! | CCTTTGACATAAGAGTTTTA+AGG | + | chr6_2:13823365-13823384 | None:intergenic | 30.0% |
CCTTAAAACTCTTATGTCAA+AGG | - | chr6_2:13823362-13823381 | Msa0910180:intron | 30.0% | |
ATTTAGTGGAAGTGATCTAA+AGG | - | chr6_2:13823434-13823453 | Msa0910180:intron | 30.0% | |
TTCATGTCTTCCATACTTAA+AGG | + | chr6_2:13823779-13823798 | None:intergenic | 30.0% | |
TAATTAAATAGCGGCTATAG+TGG | - | chr6_2:13823856-13823875 | Msa0910180:intron | 30.0% | |
!! | TACAAAGTGTTGTCAAATAG+CGG | - | chr6_2:13823921-13823940 | Msa0910180:intron | 30.0% |
GGCTATATTAAAAAAGCTAG+CGG | - | chr6_2:13823942-13823961 | Msa0910180:intron | 30.0% | |
ATCGATGAATGTTTATATGC+AGG | - | chr6_2:13824103-13824122 | Msa0910180:intron | 30.0% | |
!! | ATATCTTTGGAACACTTGAA+GGG | + | chr6_2:13824336-13824355 | None:intergenic | 30.0% |
!! | TATATCTTTGGAACACTTGA+AGG | + | chr6_2:13824337-13824356 | None:intergenic | 30.0% |
!! | CCTCTTAGCTTTTATATCTT+TGG | + | chr6_2:13824349-13824368 | None:intergenic | 30.0% |
CCAAAGATATAAAAGCTAAG+AGG | - | chr6_2:13824346-13824365 | Msa0910180:CDS | 30.0% | |
TATTAGTATTGTGTCATGTG+AGG | - | chr6_2:13824424-13824443 | Msa0910180:five_prime_UTR | 30.0% | |
!! | GGAAGATGCAATTGATTTTT+AGG | - | chr6_2:13824451-13824470 | Msa0910180:five_prime_UTR | 30.0% |
!! | GCAATTGATTTTTAGGAAGT+AGG | - | chr6_2:13824458-13824477 | Msa0910180:five_prime_UTR | 30.0% |
!! | TTTTTGTCAGCATTGAGTGT+TGG | - | chr6_2:13818677-13818696 | Msa0910180:three_prime_UTR | 35.0% |
AAATCTTGGGACTTTCCAAA+TGG | - | chr6_2:13819082-13819101 | Msa0910180:intron | 35.0% | |
AATCTTGGGACTTTCCAAAT+GGG | - | chr6_2:13819083-13819102 | Msa0910180:intron | 35.0% | |
TTCATCAAAGAAACCCCATT+TGG | + | chr6_2:13819100-13819119 | None:intergenic | 35.0% | |
!!! | ATCTTAACCTCCCACTTTTT+GGG | - | chr6_2:13819201-13819220 | Msa0910180:intron | 35.0% |
ATCATGACCAGAACAATCAT+TGG | + | chr6_2:13819278-13819297 | None:intergenic | 35.0% | |
TTATATGCTTCGGATCAGAA+CGG | + | chr6_2:13819534-13819553 | None:intergenic | 35.0% | |
CTGATGTATACTAATCAGAC+CGG | + | chr6_2:13819567-13819586 | None:intergenic | 35.0% | |
AAAAAGACAGGCAAGTGAAA+AGG | - | chr6_2:13819682-13819701 | Msa0910180:CDS | 35.0% | |
ATTAGTCCTTAAACCGACAA+TGG | + | chr6_2:13819712-13819731 | None:intergenic | 35.0% | |
!!! | CATGTTTTTTAGTTGCGACA+GGG | + | chr6_2:13819748-13819767 | None:intergenic | 35.0% |
TTATGTCGAGCAAAGAGTAA+AGG | - | chr6_2:13819777-13819796 | Msa0910180:intron | 35.0% | |
CTTGTACATAATATACCTGC+AGG | + | chr6_2:13820103-13820122 | None:intergenic | 35.0% | |
GAAGTAATGTGCTAAAGCTT+TGG | + | chr6_2:13820234-13820253 | None:intergenic | 35.0% | |
!! | TGTTACTGATTTCTCTGTGA+AGG | - | chr6_2:13820277-13820296 | Msa0910180:intron | 35.0% |
!!! | AGACTTACTGGTTCTTTTCT+TGG | + | chr6_2:13820413-13820432 | None:intergenic | 35.0% |
AAGTTGCAAGTTAGACTTAC+TGG | + | chr6_2:13820425-13820444 | None:intergenic | 35.0% | |
TGGATTTGTAGAACCACTTT+GGG | + | chr6_2:13820735-13820754 | None:intergenic | 35.0% | |
TGGGTGATCAAACCTAAATA+TGG | + | chr6_2:13820789-13820808 | None:intergenic | 35.0% | |
GTTCCTTAGTAGTCATCAAA+TGG | + | chr6_2:13821451-13821470 | None:intergenic | 35.0% | |
AGCATGTCAAGCTAAACAAT+AGG | - | chr6_2:13821751-13821770 | Msa0910180:CDS | 35.0% | |
GAAAATGTTGACGATATTGC+CGG | - | chr6_2:13821906-13821925 | Msa0910180:CDS | 35.0% | |
!!! | CACTTTTATTTTCTGGTGCT+TGG | + | chr6_2:13821959-13821978 | None:intergenic | 35.0% |
AGCACCAGAAAATAAAAGTG+AGG | - | chr6_2:13821959-13821978 | Msa0910180:CDS | 35.0% | |
ATCCCTGTAACGAAAAAAGA+AGG | - | chr6_2:13821993-13822012 | Msa0910180:CDS | 35.0% | |
TAACACCTATCTCATTTGCA+GGG | + | chr6_2:13822169-13822188 | None:intergenic | 35.0% | |
ACCATCACTTCAAAATGGTT+CGG | - | chr6_2:13822401-13822420 | Msa0910180:CDS | 35.0% | |
ATCAAGATCAAATGGTCTGT+TGG | + | chr6_2:13822636-13822655 | None:intergenic | 35.0% | |
ATCGCTTCATCAAGATCAAA+TGG | + | chr6_2:13822644-13822663 | None:intergenic | 35.0% | |
TTGATGAAGCGATTATACGA+CGG | - | chr6_2:13822651-13822670 | Msa0910180:intron | 35.0% | |
GCTAACAATAAGACAAGATG+TGG | + | chr6_2:13822694-13822713 | None:intergenic | 35.0% | |
CATAGGTATAGATGAACAAC+TGG | - | chr6_2:13822943-13822962 | Msa0910180:intron | 35.0% | |
!!! | GTCCACTCTTATTTTTCACA+TGG | - | chr6_2:13823095-13823114 | Msa0910180:intron | 35.0% |
TTTATTGTTGAGCAGGATCA+TGG | - | chr6_2:13823305-13823324 | Msa0910180:intron | 35.0% | |
AAAGGAGAAACACGAAAACT+TGG | - | chr6_2:13823380-13823399 | Msa0910180:intron | 35.0% | |
ACAGAATTTGTGCATAACTG+CGG | - | chr6_2:13823530-13823549 | Msa0910180:intron | 35.0% | |
AATACAGCAGGAGAAAAAGA+AGG | - | chr6_2:13823575-13823594 | Msa0910180:intron | 35.0% | |
ATGAACCAGAAATCATCTTG+AGG | - | chr6_2:13823753-13823772 | Msa0910180:intron | 35.0% | |
CATGAAACAAGCTAAGAATC+AGG | - | chr6_2:13823793-13823812 | Msa0910180:intron | 35.0% | |
AAACAAGCTAAGAATCAGGT+AGG | - | chr6_2:13823797-13823816 | Msa0910180:intron | 35.0% | |
GATGAATGTTTATATGCAGG+TGG | - | chr6_2:13824106-13824125 | Msa0910180:intron | 35.0% | |
TAATGGCTGAGCTAAAACAA+TGG | - | chr6_2:13824156-13824175 | Msa0910180:intron | 35.0% | |
GGGTATATTTCAACAAAGCA+AGG | - | chr6_2:13824287-13824306 | Msa0910180:CDS | 35.0% | |
!!! | AGAGGGCTCTAGAATTTTTT+TGG | - | chr6_2:13824364-13824383 | Msa0910180:CDS | 35.0% |
! | TATTGTGTCATGTGAGGTTT+TGG | - | chr6_2:13824430-13824449 | Msa0910180:five_prime_UTR | 35.0% |
TTTGACACCAACGTTGTCTT+CGG | - | chr6_2:13818494-13818513 | Msa0910180:three_prime_UTR | 40.0% | |
! | CTCTCTCCAGAATCATTTTC+TGG | - | chr6_2:13818561-13818580 | Msa0910180:three_prime_UTR | 40.0% |
!! | TTGAGTGTTGGTGTTGGATT+AGG | - | chr6_2:13818689-13818708 | Msa0910180:three_prime_UTR | 40.0% |
!! | CTCAAGAGACTTGTTGTTGA+TGG | - | chr6_2:13818809-13818828 | Msa0910180:exon | 40.0% |
ATCTTGGGACTTTCCAAATG+GGG | - | chr6_2:13819084-13819103 | Msa0910180:intron | 40.0% | |
!! | GATCTTAACCTCCCACTTTT+TGG | - | chr6_2:13819200-13819219 | Msa0910180:intron | 40.0% |
!!! | CTCCCACTTTTTGGGAAAAT+GGG | - | chr6_2:13819209-13819228 | Msa0910180:intron | 40.0% |
! | AGCCCATTTTCCCAAAAAGT+GGG | + | chr6_2:13819214-13819233 | None:intergenic | 40.0% |
TGGTAATCCAAAGTTAGGTC+AGG | - | chr6_2:13819235-13819254 | Msa0910180:intron | 40.0% | |
CTTATCTCCTGACCTAACTT+TGG | + | chr6_2:13819245-13819264 | None:intergenic | 40.0% | |
AGTCAGACCAATGATTGTTC+TGG | - | chr6_2:13819268-13819287 | Msa0910180:CDS | 40.0% | |
TTCTGGTCATGATTTGAGCT+CGG | - | chr6_2:13819285-13819304 | Msa0910180:CDS | 40.0% | |
TTAACCACTTGAGCCAAACT+TGG | - | chr6_2:13819343-13819362 | Msa0910180:CDS | 40.0% | |
CTTCCTTGAAGGAAAAAGAC+AGG | - | chr6_2:13819670-13819689 | Msa0910180:CDS | 40.0% | |
! | TTGCCTGTCTTTTTCCTTCA+AGG | + | chr6_2:13819676-13819695 | None:intergenic | 40.0% |
!!! | CCATGTTTTTTAGTTGCGAC+AGG | + | chr6_2:13819749-13819768 | None:intergenic | 40.0% |
CCTGTCGCAACTAAAAAACA+TGG | - | chr6_2:13819746-13819765 | Msa0910180:intron | 40.0% | |
!! | AGCAGGGCTATTTTACTTTC+TGG | - | chr6_2:13820076-13820095 | Msa0910180:intron | 40.0% |
!! | ATTTTACTTTCTGGTCCTGC+AGG | - | chr6_2:13820085-13820104 | Msa0910180:intron | 40.0% |
TCTGCTTTGCAACTGTACAA+GGG | + | chr6_2:13820381-13820400 | None:intergenic | 40.0% | |
ATCTGCTTTGCAACTGTACA+AGG | + | chr6_2:13820382-13820401 | None:intergenic | 40.0% | |
GTACAGTTGCAAAGCAGATT+TGG | - | chr6_2:13820383-13820402 | Msa0910180:CDS | 40.0% | |
GTCAATATCCGAGATGACTT+TGG | - | chr6_2:13820556-13820575 | Msa0910180:CDS | 40.0% | |
CATTCGTTCCAAAGTCATCT+CGG | + | chr6_2:13820567-13820586 | None:intergenic | 40.0% | |
!! | ATGACTTTGGAACGAATGTC+TGG | - | chr6_2:13820569-13820588 | Msa0910180:CDS | 40.0% |
!! | GAACGAATGTCTGGTTTGTT+TGG | - | chr6_2:13820578-13820597 | Msa0910180:CDS | 40.0% |
! | TTTTCAATGACGCCTTCAAC+CGG | - | chr6_2:13820605-13820624 | Msa0910180:CDS | 40.0% |
! | CAAAGTACCTCTAGTTTCAC+CGG | + | chr6_2:13820627-13820646 | None:intergenic | 40.0% |
CTGGATTTGTAGAACCACTT+TGG | + | chr6_2:13820736-13820755 | None:intergenic | 40.0% | |
! | CAAAGTGGTTCTACAAATCC+AGG | - | chr6_2:13820734-13820753 | Msa0910180:CDS | 40.0% |
CTAACAACCTACCTTTGTAC+CGG | - | chr6_2:13820978-13820997 | Msa0910180:intron | 40.0% | |
CAAAACCTGCAAAATTGAGC+CGG | + | chr6_2:13821000-13821019 | None:intergenic | 40.0% | |
!!! | CAGGTTTTGGTTTCTATCTC+AGG | - | chr6_2:13821011-13821030 | Msa0910180:intron | 40.0% |
! | AGCTTGTTCTCAAATCACCA+AGG | - | chr6_2:13821072-13821091 | Msa0910180:CDS | 40.0% |
ACCGAGATGAGTTTCATCTT+CGG | + | chr6_2:13821246-13821265 | None:intergenic | 40.0% | |
AAGGAACCAGAATACCGAAA+CGG | - | chr6_2:13821464-13821483 | Msa0910180:intron | 40.0% | |
! | AGTTTTCCGTTTCGGTATTC+TGG | + | chr6_2:13821473-13821492 | None:intergenic | 40.0% |
AATGTGGACAGTTTGTCTCA+GGG | - | chr6_2:13821590-13821609 | Msa0910180:CDS | 40.0% | |
GCAATAGGCATATCAAAGCT+AGG | + | chr6_2:13821714-13821733 | None:intergenic | 40.0% | |
ACATGCTCTTACGTATTCCT+CGG | + | chr6_2:13821738-13821757 | None:intergenic | 40.0% | |
!!! | TCGGCCTCACTTTTATTTTC+TGG | + | chr6_2:13821966-13821985 | None:intergenic | 40.0% |
CGTTACAGGGATAGATTTCT+CGG | + | chr6_2:13821985-13822004 | None:intergenic | 40.0% | |
!!! | CGCCTTCTTTTTTCGTTACA+GGG | + | chr6_2:13821998-13822017 | None:intergenic | 40.0% |
!!! | TCGCCTTCTTTTTTCGTTAC+AGG | + | chr6_2:13821999-13822018 | None:intergenic | 40.0% |
TATATGCTTGCAGGAAGTTC+CGG | - | chr6_2:13822106-13822125 | Msa0910180:intron | 40.0% | |
GTTATCCCTGCAAATGAGAT+AGG | - | chr6_2:13822161-13822180 | Msa0910180:CDS | 40.0% | |
GTAACACCTATCTCATTTGC+AGG | + | chr6_2:13822170-13822189 | None:intergenic | 40.0% | |
! | TTAGAAGTCCACCTTTGAAG+AGG | + | chr6_2:13822271-13822290 | None:intergenic | 40.0% |
!! | CTTGGCTAGCATTGTTTTTC+CGG | + | chr6_2:13822333-13822352 | None:intergenic | 40.0% |
TGTCCACCATCACTTCAAAA+TGG | - | chr6_2:13822396-13822415 | Msa0910180:CDS | 40.0% | |
!!! | GAACCATTTTGAAGTGATGG+TGG | + | chr6_2:13822402-13822421 | None:intergenic | 40.0% |
!!! | TCCGAACCATTTTGAAGTGA+TGG | + | chr6_2:13822405-13822424 | None:intergenic | 40.0% |
GAATTCATGACACATTGGGA+TGG | - | chr6_2:13822566-13822585 | Msa0910180:intron | 40.0% | |
!! | CATTGGGATGGACTATTATC+TGG | - | chr6_2:13822578-13822597 | Msa0910180:intron | 40.0% |
TGGACACCTCATAACTCATA+AGG | + | chr6_2:13823080-13823099 | None:intergenic | 40.0% | |
AAGCAACAGTTTCTGTCTCT+TGG | - | chr6_2:13823163-13823182 | Msa0910180:intron | 40.0% | |
TCTTCCATCTGCTGAGAATA+GGG | - | chr6_2:13823332-13823351 | Msa0910180:intron | 40.0% | |
ATTTCCCTATTCTCAGCAGA+TGG | + | chr6_2:13823339-13823358 | None:intergenic | 40.0% | |
ACACGAAAACTTGGACTTCA+AGG | - | chr6_2:13823389-13823408 | Msa0910180:intron | 40.0% | |
ACCATGACAGAAGGATTTAG+TGG | - | chr6_2:13823420-13823439 | Msa0910180:intron | 40.0% | |
TCCACTAAATCCTTCTGTCA+TGG | + | chr6_2:13823424-13823443 | None:intergenic | 40.0% | |
TGCTGTATTAACTCCCTTAC+AGG | + | chr6_2:13823564-13823583 | None:intergenic | 40.0% | |
TGTAAGGGAGTTAATACAGC+AGG | - | chr6_2:13823563-13823582 | Msa0910180:intron | 40.0% | |
GCAGGAGAAAAAGAAGGAAA+TGG | - | chr6_2:13823581-13823600 | Msa0910180:intron | 40.0% | |
AAAGGCCTCAAGATGATTTC+TGG | + | chr6_2:13823761-13823780 | None:intergenic | 40.0% | |
CATCTTGAGGCCTTTAAGTA+TGG | - | chr6_2:13823766-13823785 | Msa0910180:intron | 40.0% | |
! | TCTTTTTCTCATGTCAACCG+CGG | + | chr6_2:13823997-13824016 | None:intergenic | 40.0% |
TGCATCAGAAGGTTCAGTAA+TGG | - | chr6_2:13824139-13824158 | Msa0910180:intron | 40.0% | |
AAAGACTCCGAAGACAACGT+TGG | + | chr6_2:13818504-13818523 | None:intergenic | 45.0% | |
!! | CTGTTTCTGGAGGGTCTTAA+AGG | - | chr6_2:13818617-13818636 | Msa0910180:intron | 45.0% |
!! | TCAGCATTGAGTGTTGGTGT+TGG | - | chr6_2:13818683-13818702 | Msa0910180:three_prime_UTR | 45.0% |
!! | GTTGGTGTTGGATTAGGTGT+TGG | - | chr6_2:13818695-13818714 | Msa0910180:three_prime_UTR | 45.0% |
!! | GTTGGATTAGGTGTTGGACT+TGG | - | chr6_2:13818701-13818720 | Msa0910180:three_prime_UTR | 45.0% |
GTTGGACTTGGATTGAGTTC+TGG | - | chr6_2:13818713-13818732 | Msa0910180:three_prime_UTR | 45.0% | |
TGGACAAGCTGTCCAGAAAT+GGG | - | chr6_2:13818733-13818752 | Msa0910180:three_prime_UTR | 45.0% | |
! | CCATTTTCCCAAAAAGTGGG+AGG | + | chr6_2:13819211-13819230 | None:intergenic | 45.0% |
!!! | CCTCCCACTTTTTGGGAAAA+TGG | - | chr6_2:13819208-13819227 | Msa0910180:intron | 45.0% |
! | GAGCCCATTTTCCCAAAAAG+TGG | + | chr6_2:13819215-13819234 | None:intergenic | 45.0% |
!! | CTTTTTGGGAAAATGGGCTC+TGG | - | chr6_2:13819215-13819234 | Msa0910180:intron | 45.0% |
! | GGCTCTGGTAATCCAAAGTT+AGG | - | chr6_2:13819230-13819249 | Msa0910180:intron | 45.0% |
TCTGGTCATGATTTGAGCTC+GGG | - | chr6_2:13819286-13819305 | Msa0910180:CDS | 45.0% | |
! | GAAACCAAGTTTGGCTCAAG+TGG | + | chr6_2:13819350-13819369 | None:intergenic | 45.0% |
!! | TCTGGTTCATGCTAGTTCTG+TGG | - | chr6_2:13819413-13819432 | Msa0910180:intron | 45.0% |
TCGGTGAAACACTTCCTTGA+AGG | - | chr6_2:13819659-13819678 | Msa0910180:CDS | 45.0% | |
AGTCCTTAAACCGACAATGG+CGG | + | chr6_2:13819709-13819728 | None:intergenic | 45.0% | |
!!! | TTTTTAGTTGCGACAGGGCA+AGG | + | chr6_2:13819743-13819762 | None:intergenic | 45.0% |
TGAGAGGTTTCTTGTGTGCT+TGG | + | chr6_2:13820050-13820069 | None:intergenic | 45.0% | |
AGTAAAATAGCCCTGCTTGC+CGG | + | chr6_2:13820073-13820092 | None:intergenic | 45.0% | |
!! | GGTTGAAGGCGTCATTGAAA+AGG | + | chr6_2:13820606-13820625 | None:intergenic | 45.0% |
CGAATAATCCTCCAAGGCTA+CGG | - | chr6_2:13820669-13820688 | Msa0910180:CDS | 45.0% | |
AGTAGCACTTCTTCCCAAAG+TGG | - | chr6_2:13820719-13820738 | Msa0910180:CDS | 45.0% | |
AATTGAGCCGGTACAAAGGT+AGG | + | chr6_2:13820988-13821007 | None:intergenic | 45.0% | |
GCAAAATTGAGCCGGTACAA+AGG | + | chr6_2:13820992-13821011 | None:intergenic | 45.0% | |
!!! | TTGTACCGGCTCAATTTTGC+AGG | - | chr6_2:13820992-13821011 | Msa0910180:intron | 45.0% |
! | CGGCTCAATTTTGCAGGTTT+TGG | - | chr6_2:13820998-13821017 | Msa0910180:intron | 45.0% |
!! | TCAGGTTCGGTGTTGATACT+CGG | - | chr6_2:13821131-13821150 | Msa0910180:CDS | 45.0% |
AATTGGATGAAAGGGTCGCT+AGG | - | chr6_2:13821189-13821208 | Msa0910180:intron | 45.0% | |
CCGAGATGAGTTTCATCTTC+GGG | + | chr6_2:13821245-13821264 | None:intergenic | 45.0% | |
CCCGAAGATGAAACTCATCT+CGG | - | chr6_2:13821242-13821261 | Msa0910180:intron | 45.0% | |
ATGAAACTCATCTCGGTAGC+TGG | - | chr6_2:13821249-13821268 | Msa0910180:intron | 45.0% | |
CAATGTGGACAGTTTGTCTC+AGG | - | chr6_2:13821589-13821608 | Msa0910180:CDS | 45.0% | |
TTGATATGCCTATTGCACCG+AGG | - | chr6_2:13821718-13821737 | Msa0910180:CDS | 45.0% | |
! | TACGTATTCCTCGGTGCAAT+AGG | + | chr6_2:13821729-13821748 | None:intergenic | 45.0% |
!! | CTTACTGCTTTTACAGGCAC+TGG | + | chr6_2:13822026-13822045 | None:intergenic | 45.0% |
TCATTTGCAGGGATAACCTC+TGG | + | chr6_2:13822158-13822177 | None:intergenic | 45.0% | |
! | GGTGTTACATTCGCAGACAT+CGG | - | chr6_2:13822182-13822201 | Msa0910180:intron | 45.0% |
AGCTAGTAATGCTTCCCCTT+AGG | - | chr6_2:13822237-13822256 | Msa0910180:intron | 45.0% | |
!! | GGACTTCTAAAGCCATGTAG+AGG | - | chr6_2:13822281-13822300 | Msa0910180:intron | 45.0% |
ATATTACTCTTCGGTCCACC+TGG | - | chr6_2:13822305-13822324 | Msa0910180:CDS | 45.0% | |
!! | ATTGTTTTTCCGGTACCAGG+TGG | + | chr6_2:13822323-13822342 | None:intergenic | 45.0% |
!! | AGCATTGTTTTTCCGGTACC+AGG | + | chr6_2:13822326-13822345 | None:intergenic | 45.0% |
CGGAAAAACAATGCTAGCCA+AGG | - | chr6_2:13822331-13822350 | Msa0910180:CDS | 45.0% | |
TTTGTTCACGCTAGCAGCTA+AGG | - | chr6_2:13822448-13822467 | Msa0910180:CDS | 45.0% | |
GATGAAGTTGACAGCATGCT+CGG | - | chr6_2:13822494-13822513 | Msa0910180:intron | 45.0% | |
TACTAGAGTCGGAGAACATG+AGG | - | chr6_2:13822523-13822542 | Msa0910180:intron | 45.0% | |
TTGTTGAGCAGGATCATGGT+TGG | - | chr6_2:13823309-13823328 | Msa0910180:intron | 45.0% | |
GTCTTCCATCTGCTGAGAAT+AGG | - | chr6_2:13823331-13823350 | Msa0910180:intron | 45.0% | |
GAACTAGCAACCATGACAGA+AGG | - | chr6_2:13823411-13823430 | Msa0910180:intron | 45.0% | |
! | GCTGCAAGTTTTGCATCAGA+AGG | - | chr6_2:13824128-13824147 | Msa0910180:intron | 45.0% |
TGGAATGAATTGTACGGCGA+AGG | - | chr6_2:13824176-13824195 | Msa0910180:intron | 45.0% | |
AATGAATTGTACGGCGAAGG+CGG | - | chr6_2:13824179-13824198 | Msa0910180:intron | 45.0% | |
!!! | TAATTATATTTATATTTTTG+TGG | - | chr6_2:13818926-13818945 | Msa0910180:intron | 5.0% |
!!! | AATTATATTTATATTTTTGT+GGG | - | chr6_2:13818927-13818946 | Msa0910180:intron | 5.0% |
!!! | TTTGTTAATTATAAATTTTT+AGG | + | chr6_2:13822984-13823003 | None:intergenic | 5.0% |
CTGGACAAGCTGTCCAGAAA+TGG | - | chr6_2:13818732-13818751 | Msa0910180:three_prime_UTR | 50.0% | |
CAAGCTGTCCAGAAATGGGT+TGG | - | chr6_2:13818737-13818756 | Msa0910180:three_prime_UTR | 50.0% | |
!! | CTGTCCAGAAATGGGTTGGA+GGG | - | chr6_2:13818741-13818760 | Msa0910180:three_prime_UTR | 50.0% |
GATTCCCTCCAACCCATTTC+TGG | + | chr6_2:13818748-13818767 | None:intergenic | 50.0% | |
AGGGAATCGCGATATCGATG+AGG | - | chr6_2:13818760-13818779 | Msa0910180:three_prime_UTR | 50.0% | |
CGCGATATCGATGAGGTTTC+TGG | - | chr6_2:13818767-13818786 | Msa0910180:three_prime_UTR | 50.0% | |
GTGAAAAGGACCGCCATTGT+CGG | - | chr6_2:13819696-13819715 | Msa0910180:CDS | 50.0% | |
GCACACAAGAAACCTCTCAC+CGG | - | chr6_2:13820051-13820070 | Msa0910180:intron | 50.0% | |
! | CCTCTAGTTTCACCGGTTGA+AGG | + | chr6_2:13820620-13820639 | None:intergenic | 50.0% |
CCTTCAACCGGTGAAACTAG+AGG | - | chr6_2:13820617-13820636 | Msa0910180:CDS | 50.0% | |
ATAATCCTCCAAGGCTACGG+AGG | - | chr6_2:13820672-13820691 | Msa0910180:CDS | 50.0% | |
ACTTAGATCAGACGCAGCAG+AGG | + | chr6_2:13820702-13820721 | None:intergenic | 50.0% | |
ACTCATCTCGGTAGCTGGAA+AGG | - | chr6_2:13821254-13821273 | Msa0910180:intron | 50.0% | |
! | CCACATTGCTGAAGTACTCG+CGG | - | chr6_2:13821325-13821344 | Msa0910180:intron | 50.0% |
TCAGGGATTGAGTCTGTTCC+AGG | - | chr6_2:13821607-13821626 | Msa0910180:CDS | 50.0% | |
GGATTGAGTCTGTTCCAGGA+AGG | - | chr6_2:13821611-13821630 | Msa0910180:CDS | 50.0% | |
TTCCAGGAAGGCAAGAGTAG+TGG | - | chr6_2:13821623-13821642 | Msa0910180:CDS | 50.0% | |
TTCCACTACTCTTGCCTTCC+TGG | + | chr6_2:13821628-13821647 | None:intergenic | 50.0% | |
CCTCACATCATTCTTTGCGC+CGG | + | chr6_2:13821928-13821947 | None:intergenic | 50.0% | |
CGAGAAGCGAATTAGACCAG+AGG | - | chr6_2:13822139-13822158 | Msa0910180:CDS | 50.0% | |
ATTCGCAGACATCGGTGCAT+TGG | - | chr6_2:13822190-13822209 | Msa0910180:intron | 50.0% | |
AAGAGGTCTGGTCTCCTAAG+GGG | + | chr6_2:13822254-13822273 | None:intergenic | 50.0% | |
GAAGAGGTCTGGTCTCCTAA+GGG | + | chr6_2:13822255-13822274 | None:intergenic | 50.0% | |
TGAAGAGGTCTGGTCTCCTA+AGG | + | chr6_2:13822256-13822275 | None:intergenic | 50.0% | |
AGGAGACCAGACCTCTTCAA+AGG | - | chr6_2:13822257-13822276 | Msa0910180:intron | 50.0% | |
AGACCAGACCTCTTCAAAGG+TGG | - | chr6_2:13822260-13822279 | Msa0910180:intron | 50.0% | |
! | AGTCCACCTTTGAAGAGGTC+TGG | + | chr6_2:13822266-13822285 | None:intergenic | 50.0% |
TGCTTCATTCGCAATCGCCT+TGG | + | chr6_2:13822351-13822370 | None:intergenic | 50.0% | |
AAGGCGATTGCGAATGAAGC+AGG | - | chr6_2:13822350-13822369 | Msa0910180:CDS | 50.0% | |
CTGCTAGCGTGAACAAAGCT+CGG | + | chr6_2:13822445-13822464 | None:intergenic | 50.0% | |
TGCGGCTTATCGACCTGTAA+GGG | - | chr6_2:13823548-13823567 | Msa0910180:intron | 50.0% | |
! | CCACTATTTTCCGTGATCCG+CGG | - | chr6_2:13823977-13823996 | Msa0910180:intron | 50.0% |
!! | GCTGTCCAGAAATGGGTTGG+AGG | - | chr6_2:13818740-13818759 | Msa0910180:three_prime_UTR | 55.0% |
!! | GGACCGCCATTGTCGGTTTA+AGG | - | chr6_2:13819703-13819722 | Msa0910180:CDS | 55.0% |
AAACCTCTCACCGGCAAGCA+GGG | - | chr6_2:13820060-13820079 | Msa0910180:intron | 55.0% | |
CCGCGAGTACTTCAGCAATG+TGG | + | chr6_2:13821328-13821347 | None:intergenic | 55.0% | |
GATCAGCAGTATGCGCAGCA+GGG | + | chr6_2:13821814-13821833 | None:intergenic | 55.0% | |
TGATCAGCAGTATGCGCAGC+AGG | + | chr6_2:13821815-13821834 | None:intergenic | 55.0% | |
TGCTGCGCATACTGCTGATC+AGG | - | chr6_2:13821814-13821833 | Msa0910180:CDS | 55.0% | |
GCTGCGCATACTGCTGATCA+GGG | - | chr6_2:13821815-13821834 | Msa0910180:CDS | 55.0% | |
CCGGCGCAAAGAATGATGTG+AGG | - | chr6_2:13821925-13821944 | Msa0910180:CDS | 55.0% | |
CGCTTCTCGAACTCGTTGTC+CGG | + | chr6_2:13822128-13822147 | None:intergenic | 55.0% | |
CTCGGTCAGCGTACTAGAGT+CGG | - | chr6_2:13822512-13822531 | Msa0910180:intron | 55.0% | |
TCGGAGAACATGAGGCCATG+AGG | - | chr6_2:13822531-13822550 | Msa0910180:intron | 55.0% | |
TTATACGACGGTTCGAGCGC+AGG | - | chr6_2:13822663-13822682 | Msa0910180:intron | 55.0% | |
CTGCGGCTTATCGACCTGTA+AGG | - | chr6_2:13823547-13823566 | Msa0910180:intron | 55.0% | |
CCGCGGATCACGGAAAATAG+TGG | + | chr6_2:13823980-13823999 | None:intergenic | 55.0% | |
CTCATGTCAACCGCGGATCA+CGG | + | chr6_2:13823990-13824009 | None:intergenic | 55.0% | |
GAAACCTCTCACCGGCAAGC+AGG | - | chr6_2:13820059-13820078 | Msa0910180:intron | 60.0% | |
! | GCATTCCTCCGTAGCCTTGG+AGG | + | chr6_2:13820680-13820699 | None:intergenic | 60.0% |
! | GAGGCATTCCTCCGTAGCCT+TGG | + | chr6_2:13820683-13820702 | None:intergenic | 60.0% |
CTCTTCGGTCCACCTGGTAC+CGG | - | chr6_2:13822311-13822330 | Msa0910180:CDS | 60.0% | |
TGTACGGCGAAGGCGGTTCA+AGG | - | chr6_2:13824186-13824205 | Msa0910180:CDS | 60.0% | |
TAGCCCTGCTTGCCGGTGAG+AGG | + | chr6_2:13820066-13820085 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6_2 | gene | 13818488 | 13824568 | 13818488 | ID=Msa0910180;Name=Msa0910180 |
chr6_2 | mRNA | 13818488 | 13824568 | 13818488 | ID=Msa0910180-mRNA-1;Parent=Msa0910180;Name=Msa0910180-mRNA-1;_AED=0.15;_eAED=0.15;_QI=171|1|1|1|0.92|0.86|15|306|818 |
chr6_2 | exon | 13818488 | 13818610 | 13818488 | ID=Msa0910180-mRNA-1:exon:3145;Parent=Msa0910180-mRNA-1 |
chr6_2 | exon | 13818635 | 13818931 | 13818635 | ID=Msa0910180-mRNA-1:exon:3144;Parent=Msa0910180-mRNA-1 |
chr6_2 | exon | 13819242 | 13819367 | 13819242 | ID=Msa0910180-mRNA-1:exon:3143;Parent=Msa0910180-mRNA-1 |
chr6_2 | exon | 13819454 | 13819522 | 13819454 | ID=Msa0910180-mRNA-1:exon:3142;Parent=Msa0910180-mRNA-1 |
chr6_2 | exon | 13819601 | 13819736 | 13819601 | ID=Msa0910180-mRNA-1:exon:3141;Parent=Msa0910180-mRNA-1 |
chr6_2 | exon | 13820372 | 13820937 | 13820372 | ID=Msa0910180-mRNA-1:exon:3140;Parent=Msa0910180-mRNA-1 |
chr6_2 | exon | 13821016 | 13821150 | 13821016 | ID=Msa0910180-mRNA-1:exon:3139;Parent=Msa0910180-mRNA-1 |
chr6_2 | exon | 13821383 | 13821455 | 13821383 | ID=Msa0910180-mRNA-1:exon:3138;Parent=Msa0910180-mRNA-1 |
chr6_2 | exon | 13821546 | 13822042 | 13821546 | ID=Msa0910180-mRNA-1:exon:3137;Parent=Msa0910180-mRNA-1 |
chr6_2 | exon | 13822126 | 13822190 | 13822126 | ID=Msa0910180-mRNA-1:exon:3136;Parent=Msa0910180-mRNA-1 |
chr6_2 | exon | 13822301 | 13822511 | 13822301 | ID=Msa0910180-mRNA-1:exon:3135;Parent=Msa0910180-mRNA-1 |
chr6_2 | exon | 13822632 | 13822667 | 13822632 | ID=Msa0910180-mRNA-1:exon:3134;Parent=Msa0910180-mRNA-1 |
chr6_2 | exon | 13822758 | 13822846 | 13822758 | ID=Msa0910180-mRNA-1:exon:3133;Parent=Msa0910180-mRNA-1 |
chr6_2 | exon | 13822950 | 13823071 | 13822950 | ID=Msa0910180-mRNA-1:exon:3132;Parent=Msa0910180-mRNA-1 |
chr6_2 | exon | 13824180 | 13824568 | 13824180 | ID=Msa0910180-mRNA-1:exon:3131;Parent=Msa0910180-mRNA-1 |
chr6_2 | five_prime_UTR | 13824398 | 13824568 | 13824398 | ID=Msa0910180-mRNA-1:five_prime_utr;Parent=Msa0910180-mRNA-1 |
chr6_2 | CDS | 13824180 | 13824397 | 13824180 | ID=Msa0910180-mRNA-1:cds;Parent=Msa0910180-mRNA-1 |
chr6_2 | CDS | 13822950 | 13823071 | 13822950 | ID=Msa0910180-mRNA-1:cds;Parent=Msa0910180-mRNA-1 |
chr6_2 | CDS | 13822758 | 13822846 | 13822758 | ID=Msa0910180-mRNA-1:cds;Parent=Msa0910180-mRNA-1 |
chr6_2 | CDS | 13822632 | 13822667 | 13822632 | ID=Msa0910180-mRNA-1:cds;Parent=Msa0910180-mRNA-1 |
chr6_2 | CDS | 13822301 | 13822511 | 13822301 | ID=Msa0910180-mRNA-1:cds;Parent=Msa0910180-mRNA-1 |
chr6_2 | CDS | 13822126 | 13822190 | 13822126 | ID=Msa0910180-mRNA-1:cds;Parent=Msa0910180-mRNA-1 |
chr6_2 | CDS | 13821546 | 13822042 | 13821546 | ID=Msa0910180-mRNA-1:cds;Parent=Msa0910180-mRNA-1 |
chr6_2 | CDS | 13821383 | 13821455 | 13821383 | ID=Msa0910180-mRNA-1:cds;Parent=Msa0910180-mRNA-1 |
chr6_2 | CDS | 13821016 | 13821150 | 13821016 | ID=Msa0910180-mRNA-1:cds;Parent=Msa0910180-mRNA-1 |
chr6_2 | CDS | 13820372 | 13820937 | 13820372 | ID=Msa0910180-mRNA-1:cds;Parent=Msa0910180-mRNA-1 |
chr6_2 | CDS | 13819601 | 13819736 | 13819601 | ID=Msa0910180-mRNA-1:cds;Parent=Msa0910180-mRNA-1 |
chr6_2 | CDS | 13819454 | 13819522 | 13819454 | ID=Msa0910180-mRNA-1:cds;Parent=Msa0910180-mRNA-1 |
chr6_2 | CDS | 13819242 | 13819367 | 13819242 | ID=Msa0910180-mRNA-1:cds;Parent=Msa0910180-mRNA-1 |
chr6_2 | CDS | 13818818 | 13818931 | 13818818 | ID=Msa0910180-mRNA-1:cds;Parent=Msa0910180-mRNA-1 |
chr6_2 | three_prime_UTR | 13818635 | 13818817 | 13818635 | ID=Msa0910180-mRNA-1:three_prime_utr;Parent=Msa0910180-mRNA-1 |
chr6_2 | three_prime_UTR | 13818488 | 13818610 | 13818488 | ID=Msa0910180-mRNA-1:three_prime_utr;Parent=Msa0910180-mRNA-1 |
Gene Sequence |
Protein sequence |