Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0984510 | XP_013451687.1 | 97.066 | 818 | 19 | 1 | 1 | 818 | 1 | 813 | 0.0 | 1622 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0984510 | sp|Q7ZZ25|ATD1A_DANRE | 44.815 | 270 | 143 | 4 | 487 | 751 | 73 | 341 | 3.24e-71 | 241 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0984510 | A0A072UIT2 | 97.066 | 818 | 19 | 1 | 1 | 818 | 1 | 813 | 0.0 | 1622 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0026910 | Msa0984510 | 0.810361 | 1.197332e-50 | -8.615850e-47 |
Msa0618970 | Msa0984510 | 0.800218 | 1.598043e-48 | -8.615850e-47 |
Msa0667770 | Msa0984510 | 0.803447 | 3.471136e-49 | -8.615850e-47 |
Msa0741070 | Msa0984510 | 0.827012 | 1.978942e-54 | -8.615850e-47 |
Msa0750810 | Msa0984510 | 0.820097 | 8.210246e-53 | -8.615850e-47 |
Msa0779260 | Msa0984510 | 0.811437 | 7.003821e-51 | -8.615850e-47 |
Msa0142500 | Msa0984510 | 0.804435 | 2.163654e-49 | -8.615850e-47 |
Msa0152560 | Msa0984510 | 0.804578 | 2.019527e-49 | -8.615850e-47 |
Msa0157040 | Msa0984510 | 0.813621 | 2.333011e-51 | -8.615850e-47 |
Msa0191890 | Msa0984510 | 0.803209 | 3.888410e-49 | -8.615850e-47 |
Msa0200650 | Msa0984510 | 0.809974 | 1.451550e-50 | -8.615850e-47 |
Msa0215590 | Msa0984510 | 0.800457 | 1.428459e-48 | -8.615850e-47 |
Msa0391400 | Msa0984510 | 0.814667 | 1.371018e-51 | -8.615850e-47 |
Msa0408300 | Msa0984510 | 0.818593 | 1.808009e-52 | -8.615850e-47 |
Msa0432160 | Msa0984510 | 0.808864 | 2.511614e-50 | -8.615850e-47 |
Msa0443020 | Msa0984510 | 0.805172 | 1.517581e-49 | -8.615850e-47 |
Msa0468250 | Msa0984510 | 0.818178 | 2.244913e-52 | -8.615850e-47 |
Msa0476680 | Msa0984510 | 0.814993 | 1.161043e-51 | -8.615850e-47 |
Msa0984510 | Msa1034310 | 0.813877 | 2.049332e-51 | -8.615850e-47 |
Msa0984510 | Msa1042660 | 0.817883 | 2.617079e-52 | -8.615850e-47 |
Msa0984510 | Msa1089460 | 0.803046 | 4.201272e-49 | -8.615850e-47 |
Msa0984510 | Msa1096070 | 0.805928 | 1.053275e-49 | -8.615850e-47 |
Msa0984510 | Msa1114590 | 0.821650 | 3.606588e-53 | -8.615850e-47 |
Msa0984510 | Msa1119090 | 0.825107 | 5.611998e-54 | -8.615850e-47 |
Msa0984510 | Msa1119190 | 0.822993 | 1.759604e-53 | -8.615850e-47 |
Msa0984510 | Msa1218580 | 0.839479 | 1.545985e-57 | -8.615850e-47 |
Msa0984510 | Msa1219000 | 0.808193 | 3.493695e-50 | -8.615850e-47 |
Msa0984510 | Msa1235390 | 0.801100 | 1.056076e-48 | -8.615850e-47 |
Msa0984510 | Msa1250110 | 0.809482 | 1.851605e-50 | -8.615850e-47 |
Msa0984510 | Msa1250730 | 0.806376 | 8.479154e-50 | -8.615850e-47 |
Msa0984510 | Msa1332760 | 0.816154 | 6.402051e-52 | -8.615850e-47 |
Msa0984510 | Msa1345940 | 0.801750 | 7.772181e-49 | -8.615850e-47 |
Msa0984510 | Msa1349450 | 0.800354 | 1.499167e-48 | -8.615850e-47 |
Msa0984510 | Msa1380400 | 0.821557 | 3.789970e-53 | -8.615850e-47 |
Msa0984510 | Msa1400120 | 0.803851 | 2.861436e-49 | -8.615850e-47 |
Msa0984510 | Msa1401270 | 0.805240 | 1.468374e-49 | -8.615850e-47 |
Msa0984510 | Msa1418280 | 0.808261 | 3.378830e-50 | -8.615850e-47 |
Msa0984510 | Msa1428780 | 0.807370 | 5.224048e-50 | -8.615850e-47 |
Msa0984510 | Msa1436600 | 0.836527 | 8.879780e-57 | -8.615850e-47 |
Msa0984510 | Msa1462360 | 0.804742 | 1.866940e-49 | -8.615850e-47 |
Msa0270580 | Msa0984510 | 0.804650 | 1.951059e-49 | -8.615850e-47 |
Msa0274980 | Msa0984510 | 0.802237 | 6.172318e-49 | -8.615850e-47 |
Msa0278580 | Msa0984510 | 0.804385 | 2.215360e-49 | -8.615850e-47 |
Msa0307310 | Msa0984510 | 0.819378 | 1.198497e-52 | -8.615850e-47 |
Msa0317960 | Msa0984510 | 0.802802 | 4.719199e-49 | -8.615850e-47 |
Msa0319290 | Msa0984510 | 0.802400 | 5.711287e-49 | -8.615850e-47 |
Msa0333650 | Msa0984510 | 0.802874 | 4.560826e-49 | -8.615850e-47 |
Msa0358400 | Msa0984510 | 0.825135 | 5.528028e-54 | -8.615850e-47 |
Msa0506860 | Msa0984510 | 0.819825 | 9.474267e-53 | -8.615850e-47 |
Msa0521010 | Msa0984510 | 0.813270 | 2.787146e-51 | -8.615850e-47 |
Msa0549890 | Msa0984510 | 0.804169 | 2.457829e-49 | -8.615850e-47 |
Msa0566350 | Msa0984510 | 0.801895 | 7.254842e-49 | -8.615850e-47 |
Msa0566750 | Msa0984510 | 0.819101 | 1.385918e-52 | -8.615850e-47 |
Msa0880810 | Msa0984510 | 0.840657 | 7.621093e-58 | -8.615850e-47 |
Msa0882830 | Msa0984510 | 0.876706 | 1.128440e-68 | -8.615850e-47 |
Msa0902830 | Msa0984510 | 0.807292 | 5.427678e-50 | -8.615850e-47 |
Msa0910180 | Msa0984510 | 0.940156 | 3.773630e-100 | -8.615850e-47 |
Msa0936390 | Msa0984510 | 0.803393 | 3.562001e-49 | -8.615850e-47 |
Msa0947880 | Msa0984510 | 0.820918 | 5.320142e-53 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0984510 | MtrunA17_Chr6g0462581 | 97.066 | 818 | 19 | 1 | 1 | 818 | 1 | 813 | 0.0 | 1622 |
Msa0984510 | MtrunA17_Chr5g0397121 | 66.907 | 831 | 259 | 8 | 1 | 818 | 1 | 828 | 0.0 | 1095 |
Msa0984510 | MtrunA17_Chr8g0387641 | 63.341 | 862 | 257 | 15 | 1 | 818 | 1 | 847 | 0.0 | 1041 |
Msa0984510 | MtrunA17_Chr1g0202381 | 59.515 | 825 | 257 | 11 | 3 | 818 | 29 | 785 | 0.0 | 919 |
Msa0984510 | MtrunA17_Chr1g0202371 | 56.053 | 826 | 242 | 12 | 1 | 818 | 1 | 713 | 0.0 | 827 |
Msa0984510 | MtrunA17_Chr3g0116131 | 37.430 | 887 | 376 | 19 | 49 | 818 | 383 | 1207 | 5.10e-174 | 534 |
Msa0984510 | MtrunA17_Chr1g0204031 | 72.485 | 338 | 89 | 4 | 485 | 818 | 537 | 874 | 3.23e-159 | 486 |
Msa0984510 | MtrunA17_Chr1g0195741 | 42.560 | 625 | 255 | 10 | 237 | 818 | 680 | 1243 | 5.00e-158 | 493 |
Msa0984510 | MtrunA17_Chr1g0195741 | 37.963 | 108 | 59 | 2 | 49 | 154 | 424 | 525 | 1.84e-14 | 77.8 |
Msa0984510 | MtrunA17_Chr1g0195731 | 42.903 | 620 | 256 | 11 | 239 | 818 | 678 | 1239 | 8.04e-153 | 479 |
Msa0984510 | MtrunA17_Chr1g0195731 | 40.426 | 94 | 54 | 1 | 45 | 136 | 413 | 506 | 3.22e-14 | 77.0 |
Msa0984510 | MtrunA17_Chr4g0038101 | 38.498 | 626 | 264 | 10 | 237 | 816 | 463 | 1013 | 2.83e-126 | 403 |
Msa0984510 | MtrunA17_Chr3g0127401 | 48.039 | 306 | 127 | 6 | 487 | 785 | 63 | 343 | 5.77e-83 | 270 |
Msa0984510 | MtrunA17_Chr3g0127431 | 50.183 | 273 | 133 | 3 | 484 | 754 | 63 | 334 | 3.62e-82 | 269 |
Msa0984510 | MtrunA17_Chr6g0459561 | 42.216 | 334 | 152 | 9 | 485 | 804 | 352 | 658 | 1.17e-70 | 245 |
Msa0984510 | MtrunA17_Chr6g0459541 | 37.883 | 359 | 157 | 11 | 485 | 804 | 12 | 343 | 1.11e-64 | 220 |
Msa0984510 | MtrunA17_Chr7g0246111 | 42.294 | 279 | 150 | 5 | 454 | 730 | 168 | 437 | 1.21e-62 | 219 |
Msa0984510 | MtrunA17_Chr4g0004121 | 42.222 | 270 | 147 | 4 | 483 | 745 | 221 | 488 | 6.98e-62 | 218 |
Msa0984510 | MtrunA17_Chr4g0052271 | 46.320 | 231 | 120 | 4 | 505 | 733 | 119 | 347 | 8.32e-59 | 206 |
Msa0984510 | MtrunA17_Chr4g0026631 | 47.598 | 229 | 112 | 5 | 505 | 729 | 127 | 351 | 1.44e-57 | 203 |
Msa0984510 | MtrunA17_Chr2g0321241 | 46.725 | 229 | 114 | 5 | 505 | 729 | 132 | 356 | 1.72e-57 | 203 |
Msa0984510 | MtrunA17_Chr6g0459551 | 38.889 | 324 | 147 | 9 | 485 | 765 | 72 | 387 | 6.05e-54 | 193 |
Msa0984510 | MtrunA17_Chr2g0327121 | 39.370 | 254 | 145 | 6 | 505 | 753 | 480 | 729 | 1.07e-47 | 182 |
Msa0984510 | MtrunA17_Chr2g0327121 | 39.300 | 257 | 147 | 5 | 505 | 758 | 207 | 457 | 1.06e-42 | 167 |
Msa0984510 | MtrunA17_Chr1g0180791 | 34.426 | 305 | 187 | 7 | 505 | 804 | 478 | 774 | 1.28e-47 | 182 |
Msa0984510 | MtrunA17_Chr1g0180791 | 39.689 | 257 | 146 | 5 | 505 | 758 | 205 | 455 | 1.41e-45 | 176 |
Msa0984510 | MtrunA17_Chr7g0264521 | 34.754 | 305 | 185 | 7 | 505 | 804 | 479 | 774 | 7.95e-47 | 179 |
Msa0984510 | MtrunA17_Chr7g0264521 | 39.300 | 257 | 147 | 5 | 505 | 758 | 206 | 456 | 3.86e-45 | 174 |
Msa0984510 | MtrunA17_Chr6g0459531 | 35.314 | 303 | 140 | 8 | 505 | 804 | 67 | 316 | 1.32e-45 | 166 |
Msa0984510 | MtrunA17_Chr3g0145011 | 37.778 | 270 | 146 | 10 | 499 | 753 | 136 | 398 | 1.17e-41 | 157 |
Msa0984510 | MtrunA17_Chr3g0141901 | 36.940 | 268 | 152 | 9 | 499 | 756 | 133 | 393 | 4.02e-41 | 155 |
Msa0984510 | MtrunA17_Chr3g0135721 | 42.128 | 235 | 125 | 7 | 496 | 725 | 215 | 443 | 6.72e-41 | 160 |
Msa0984510 | MtrunA17_Chr3g0135761 | 42.979 | 235 | 123 | 7 | 496 | 725 | 213 | 441 | 9.19e-41 | 160 |
Msa0984510 | MtrunA17_Chr7g0255721 | 34.965 | 286 | 153 | 7 | 475 | 729 | 628 | 911 | 9.46e-41 | 161 |
Msa0984510 | MtrunA17_Chr7g0255721 | 32.609 | 276 | 169 | 8 | 543 | 805 | 422 | 693 | 1.09e-31 | 133 |
Msa0984510 | MtrunA17_Chr7g0255901 | 34.539 | 304 | 166 | 10 | 505 | 802 | 639 | 915 | 1.33e-40 | 161 |
Msa0984510 | MtrunA17_Chr8g0362771 | 41.667 | 240 | 126 | 7 | 491 | 725 | 227 | 457 | 1.52e-40 | 159 |
Msa0984510 | MtrunA17_Chr7g0217421 | 40.909 | 242 | 135 | 6 | 504 | 740 | 38 | 276 | 1.81e-40 | 154 |
Msa0984510 | MtrunA17_Chr3g0143721 | 39.759 | 249 | 138 | 7 | 502 | 741 | 246 | 491 | 6.92e-40 | 157 |
Msa0984510 | MtrunA17_Chr5g0429571 | 42.731 | 227 | 119 | 5 | 505 | 723 | 313 | 536 | 9.39e-40 | 157 |
Msa0984510 | MtrunA17_Chr7g0255641 | 37.118 | 229 | 138 | 4 | 505 | 729 | 658 | 884 | 1.01e-39 | 158 |
Msa0984510 | MtrunA17_Chr7g0255641 | 32.852 | 277 | 145 | 11 | 544 | 814 | 432 | 673 | 2.62e-29 | 125 |
Msa0984510 | MtrunA17_Chr3g0104211 | 43.860 | 228 | 115 | 6 | 505 | 723 | 304 | 527 | 1.81e-39 | 157 |
Msa0984510 | MtrunA17_Chr7g0255651 | 38.819 | 237 | 138 | 4 | 505 | 736 | 282 | 516 | 1.93e-38 | 151 |
Msa0984510 | MtrunA17_Chr7g0255651 | 27.984 | 243 | 159 | 5 | 530 | 765 | 38 | 271 | 8.88e-15 | 78.2 |
Msa0984510 | MtrunA17_Chr4g0050561 | 37.931 | 232 | 132 | 7 | 506 | 729 | 157 | 384 | 3.98e-38 | 147 |
Msa0984510 | MtrunA17_Chr7g0248361 | 39.224 | 232 | 130 | 6 | 505 | 728 | 192 | 420 | 7.45e-38 | 150 |
Msa0984510 | MtrunA17_Chr5g0432631 | 39.344 | 244 | 137 | 7 | 491 | 729 | 215 | 452 | 1.36e-37 | 151 |
Msa0984510 | MtrunA17_Chr4g0052411 | 41.333 | 225 | 124 | 6 | 504 | 723 | 228 | 449 | 2.03e-37 | 150 |
Msa0984510 | MtrunA17_Chr1g0182711 | 36.522 | 230 | 137 | 5 | 506 | 729 | 189 | 415 | 3.37e-37 | 145 |
Msa0984510 | MtrunA17_Chr8g0345461 | 37.118 | 229 | 137 | 4 | 505 | 728 | 165 | 391 | 3.70e-37 | 145 |
Msa0984510 | MtrunA17_Chr7g0262801 | 36.522 | 230 | 137 | 5 | 506 | 729 | 188 | 414 | 4.57e-37 | 145 |
Msa0984510 | MtrunA17_Chr4g0033451 | 39.749 | 239 | 130 | 6 | 505 | 733 | 380 | 614 | 1.38e-36 | 149 |
Msa0984510 | MtrunA17_Chr2g0297281 | 41.333 | 225 | 124 | 6 | 504 | 723 | 285 | 506 | 2.14e-36 | 147 |
Msa0984510 | MtrunA17_Chr1g0204051 | 78.667 | 75 | 16 | 0 | 634 | 708 | 1 | 75 | 2.40e-36 | 131 |
Msa0984510 | MtrunA17_Chr6g0456351 | 37.903 | 248 | 141 | 6 | 505 | 743 | 317 | 560 | 1.05e-35 | 144 |
Msa0984510 | MtrunA17_Chr1g0192151 | 34.802 | 227 | 141 | 4 | 507 | 728 | 169 | 393 | 1.55e-35 | 140 |
Msa0984510 | MtrunA17_Chr4g0014731 | 34.802 | 227 | 141 | 4 | 507 | 728 | 170 | 394 | 1.73e-35 | 140 |
Msa0984510 | MtrunA17_Chr2g0277831 | 36.364 | 220 | 130 | 6 | 505 | 718 | 533 | 748 | 2.36e-35 | 144 |
Msa0984510 | MtrunA17_Chr2g0277831 | 34.603 | 315 | 176 | 10 | 504 | 804 | 242 | 540 | 4.22e-35 | 143 |
Msa0984510 | MtrunA17_Chr1g0200081 | 37.118 | 229 | 136 | 5 | 505 | 728 | 175 | 400 | 3.31e-35 | 139 |
Msa0984510 | MtrunA17_Chr3g0094871 | 36.797 | 231 | 136 | 5 | 505 | 728 | 11 | 238 | 4.10e-35 | 139 |
Msa0984510 | MtrunA17_Chr3g0108321 | 41.176 | 187 | 104 | 3 | 505 | 687 | 159 | 343 | 4.81e-35 | 137 |
Msa0984510 | MtrunA17_Chr1g0158881 | 38.760 | 258 | 145 | 8 | 491 | 743 | 316 | 565 | 5.91e-35 | 142 |
Msa0984510 | MtrunA17_Chr7g0260601 | 37.069 | 232 | 135 | 6 | 505 | 728 | 240 | 468 | 4.99e-34 | 139 |
Msa0984510 | MtrunA17_Chr2g0327231 | 41.718 | 163 | 91 | 3 | 505 | 665 | 346 | 506 | 5.77e-34 | 137 |
Msa0984510 | MtrunA17_Chr2g0327231 | 44.444 | 90 | 46 | 1 | 505 | 594 | 153 | 238 | 1.05e-14 | 77.8 |
Msa0984510 | MtrunA17_Chr3g0086411 | 33.191 | 235 | 133 | 5 | 505 | 718 | 215 | 446 | 6.66e-34 | 136 |
Msa0984510 | MtrunA17_Chr3g0086411 | 28.365 | 208 | 133 | 5 | 593 | 790 | 7 | 208 | 4.17e-13 | 72.8 |
Msa0984510 | MtrunA17_Chr6g0476861 | 35.776 | 232 | 138 | 5 | 505 | 728 | 197 | 425 | 9.79e-34 | 138 |
Msa0984510 | MtrunA17_Chr4g0031821 | 36.207 | 232 | 137 | 6 | 505 | 728 | 320 | 548 | 1.38e-33 | 138 |
Msa0984510 | MtrunA17_Chr5g0432641 | 39.331 | 239 | 134 | 7 | 496 | 729 | 182 | 414 | 2.01e-33 | 137 |
Msa0984510 | MtrunA17_Chr4g0043381 | 35.965 | 228 | 136 | 5 | 509 | 731 | 841 | 1063 | 1.89e-32 | 135 |
Msa0984510 | MtrunA17_Chr3g0086401 | 35.565 | 239 | 124 | 7 | 505 | 718 | 385 | 618 | 1.14e-31 | 132 |
Msa0984510 | MtrunA17_Chr3g0086401 | 35.410 | 305 | 170 | 11 | 500 | 790 | 87 | 378 | 8.67e-30 | 126 |
Msa0984510 | MtrunA17_Chr3g0129971 | 35.379 | 277 | 161 | 8 | 494 | 755 | 284 | 557 | 3.94e-31 | 131 |
Msa0984510 | MtrunA17_Chr7g0255691 | 37.069 | 232 | 139 | 4 | 505 | 731 | 286 | 515 | 4.20e-30 | 126 |
Msa0984510 | MtrunA17_Chr7g0255691 | 30.822 | 292 | 165 | 7 | 520 | 804 | 32 | 293 | 2.54e-27 | 117 |
Msa0984510 | MtrunA17_Chr2g0289231 | 31.707 | 246 | 154 | 6 | 505 | 741 | 297 | 537 | 4.33e-30 | 126 |
Msa0984510 | MtrunA17_Chr2g0331161 | 34.764 | 233 | 142 | 7 | 503 | 729 | 413 | 641 | 7.22e-30 | 127 |
Msa0984510 | MtrunA17_Chr8g0388371 | 35.146 | 239 | 139 | 5 | 504 | 729 | 403 | 638 | 2.92e-29 | 125 |
Msa0984510 | MtrunA17_Chr2g0316851 | 31.174 | 247 | 150 | 7 | 507 | 737 | 596 | 838 | 1.50e-28 | 123 |
Msa0984510 | MtrunA17_Chr8g0357301 | 32.364 | 275 | 155 | 10 | 497 | 749 | 459 | 724 | 5.36e-27 | 118 |
Msa0984510 | MtrunA17_Chr3g0135781 | 40.000 | 170 | 94 | 5 | 499 | 666 | 49 | 212 | 3.38e-26 | 107 |
Msa0984510 | MtrunA17_Chr4g0047411 | 32.444 | 225 | 126 | 8 | 539 | 742 | 210 | 429 | 2.94e-19 | 92.8 |
Msa0984510 | MtrunA17_Chr1g0168321 | 36.129 | 155 | 89 | 5 | 582 | 728 | 203 | 355 | 2.97e-19 | 92.0 |
Msa0984510 | MtrunA17_Chr1g0190401 | 30.224 | 268 | 154 | 10 | 473 | 725 | 657 | 906 | 9.42e-19 | 92.0 |
Msa0984510 | MtrunA17_Chr4g0062081 | 46.988 | 83 | 43 | 1 | 504 | 585 | 6 | 88 | 8.66e-17 | 76.6 |
Msa0984510 | MtrunA17_Chr6g0450161 | 28.846 | 208 | 115 | 6 | 541 | 721 | 362 | 563 | 5.43e-15 | 79.0 |
Msa0984510 | MtrunA17_Chr5g0432391 | 34.302 | 172 | 103 | 6 | 584 | 749 | 82 | 249 | 8.67e-15 | 77.4 |
Msa0984510 | MtrunA17_Chr4g0039781 | 29.187 | 209 | 114 | 6 | 541 | 721 | 368 | 570 | 1.05e-14 | 78.2 |
Msa0984510 | MtrunA17_Chr5g0404291 | 29.902 | 204 | 111 | 6 | 541 | 718 | 387 | 584 | 7.87e-14 | 75.5 |
Msa0984510 | MtrunA17_Chr3g0116941 | 30.909 | 165 | 95 | 4 | 543 | 690 | 197 | 359 | 2.62e-13 | 73.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0984510 | AT4G28000.2 | 69.249 | 839 | 230 | 10 | 1 | 818 | 1 | 832 | 0.0 | 1119 |
Msa0984510 | AT4G28000.1 | 69.295 | 837 | 231 | 10 | 1 | 818 | 1 | 830 | 0.0 | 1118 |
Msa0984510 | AT5G52882.1 | 69.570 | 838 | 226 | 11 | 1 | 818 | 1 | 829 | 0.0 | 1107 |
Msa0984510 | AT1G64110.5 | 66.865 | 839 | 245 | 11 | 1 | 818 | 1 | 827 | 0.0 | 1083 |
Msa0984510 | AT1G64110.3 | 66.865 | 839 | 245 | 11 | 1 | 818 | 1 | 827 | 0.0 | 1083 |
Msa0984510 | AT1G64110.2 | 66.746 | 839 | 248 | 11 | 1 | 818 | 1 | 829 | 0.0 | 1081 |
Msa0984510 | AT1G64110.4 | 66.746 | 839 | 248 | 11 | 1 | 818 | 1 | 829 | 0.0 | 1081 |
Msa0984510 | AT1G64110.1 | 66.667 | 816 | 241 | 11 | 24 | 818 | 19 | 824 | 0.0 | 1078 |
Msa0984510 | AT4G28000.3 | 68.742 | 803 | 223 | 10 | 1 | 782 | 1 | 796 | 0.0 | 1056 |
Msa0984510 | AT1G02890.1 | 43.891 | 622 | 253 | 10 | 238 | 818 | 680 | 1246 | 7.66e-162 | 503 |
Msa0984510 | AT1G02890.1 | 38.462 | 91 | 53 | 2 | 49 | 136 | 422 | 512 | 9.23e-12 | 69.7 |
Msa0984510 | AT4G02480.1 | 44.283 | 621 | 251 | 11 | 238 | 818 | 700 | 1265 | 1.20e-156 | 490 |
Msa0984510 | AT4G02480.1 | 41.489 | 94 | 46 | 3 | 49 | 136 | 444 | 534 | 9.88e-13 | 72.8 |
Msa0984510 | AT1G02890.2 | 40.836 | 622 | 244 | 11 | 238 | 818 | 680 | 1218 | 5.55e-139 | 442 |
Msa0984510 | AT1G02890.2 | 38.462 | 91 | 53 | 2 | 49 | 136 | 422 | 512 | 9.57e-12 | 69.7 |
Msa0984510 | AT4G24860.4 | 42.140 | 598 | 267 | 9 | 239 | 817 | 557 | 1094 | 1.89e-138 | 438 |
Msa0984510 | AT4G24860.4 | 45.556 | 90 | 47 | 1 | 49 | 136 | 299 | 388 | 1.43e-15 | 82.0 |
Msa0984510 | AT4G24860.2 | 42.140 | 598 | 267 | 9 | 239 | 817 | 580 | 1117 | 4.15e-138 | 437 |
Msa0984510 | AT4G24860.2 | 45.556 | 90 | 47 | 1 | 49 | 136 | 299 | 388 | 1.73e-15 | 81.6 |
Msa0984510 | AT4G24860.1 | 42.140 | 598 | 267 | 9 | 239 | 817 | 584 | 1121 | 6.32e-138 | 437 |
Msa0984510 | AT4G24860.1 | 45.556 | 90 | 47 | 1 | 49 | 136 | 290 | 379 | 1.81e-15 | 81.6 |
Msa0984510 | AT4G24860.3 | 42.617 | 596 | 265 | 10 | 239 | 817 | 584 | 1119 | 8.47e-138 | 437 |
Msa0984510 | AT4G24860.3 | 45.556 | 90 | 47 | 1 | 49 | 136 | 290 | 379 | 1.82e-15 | 81.6 |
Msa0984510 | AT3G19740.1 | 41.096 | 511 | 232 | 6 | 308 | 816 | 550 | 993 | 1.71e-119 | 385 |
Msa0984510 | AT1G50140.2 | 40.945 | 508 | 231 | 7 | 311 | 816 | 541 | 981 | 2.37e-115 | 374 |
Msa0984510 | AT1G50140.5 | 40.945 | 508 | 231 | 7 | 311 | 816 | 541 | 981 | 2.37e-115 | 374 |
Msa0984510 | AT1G50140.3 | 40.945 | 508 | 231 | 7 | 311 | 816 | 563 | 1003 | 2.39e-115 | 374 |
Msa0984510 | AT1G50140.1 | 40.945 | 508 | 231 | 7 | 311 | 816 | 563 | 1003 | 2.39e-115 | 374 |
Msa0984510 | AT1G50140.4 | 40.945 | 508 | 231 | 7 | 311 | 816 | 563 | 1003 | 2.39e-115 | 374 |
Msa0984510 | AT1G62130.2 | 38.185 | 584 | 277 | 12 | 239 | 818 | 533 | 1036 | 4.60e-114 | 372 |
Msa0984510 | AT1G62130.2 | 43.478 | 92 | 48 | 2 | 49 | 136 | 298 | 389 | 1.38e-14 | 78.6 |
Msa0984510 | AT1G62130.1 | 38.185 | 584 | 277 | 12 | 239 | 818 | 540 | 1043 | 9.10e-114 | 371 |
Msa0984510 | AT1G62130.1 | 43.478 | 92 | 48 | 2 | 49 | 136 | 298 | 389 | 1.55e-14 | 78.6 |
Msa0984510 | AT4G27680.1 | 52.157 | 255 | 119 | 3 | 484 | 736 | 60 | 313 | 8.34e-82 | 268 |
Msa0984510 | AT5G53540.1 | 51.190 | 252 | 120 | 3 | 487 | 736 | 66 | 316 | 9.60e-80 | 263 |
Msa0984510 | AT2G45500.4 | 43.561 | 264 | 142 | 5 | 471 | 730 | 45 | 305 | 1.52e-66 | 226 |
Msa0984510 | AT2G45500.3 | 43.561 | 264 | 142 | 5 | 471 | 730 | 45 | 305 | 1.52e-66 | 226 |
Msa0984510 | AT2G45500.1 | 43.561 | 264 | 142 | 5 | 471 | 730 | 182 | 442 | 2.51e-65 | 226 |
Msa0984510 | AT2G45500.2 | 43.561 | 264 | 142 | 5 | 471 | 730 | 178 | 438 | 2.57e-65 | 226 |
Msa0984510 | AT2G45500.5 | 43.561 | 264 | 142 | 5 | 471 | 730 | 188 | 448 | 3.77e-65 | 226 |
Msa0984510 | AT3G27120.1 | 40.541 | 333 | 159 | 9 | 485 | 804 | 370 | 676 | 7.69e-65 | 230 |
Msa0984510 | AT1G80350.1 | 37.690 | 329 | 176 | 7 | 483 | 804 | 215 | 521 | 1.45e-62 | 220 |
Msa0984510 | AT2G34560.2 | 46.522 | 230 | 118 | 4 | 505 | 731 | 109 | 336 | 1.86e-58 | 204 |
Msa0984510 | AT2G34560.1 | 47.137 | 227 | 115 | 4 | 505 | 728 | 100 | 324 | 2.05e-58 | 204 |
Msa0984510 | AT2G27600.1 | 46.053 | 228 | 117 | 4 | 505 | 729 | 129 | 353 | 6.50e-57 | 202 |
Msa0984510 | AT3G53230.1 | 38.956 | 249 | 141 | 6 | 505 | 748 | 478 | 720 | 1.70e-47 | 182 |
Msa0984510 | AT3G53230.1 | 39.300 | 257 | 147 | 5 | 505 | 758 | 205 | 455 | 4.95e-45 | 174 |
Msa0984510 | AT5G03340.1 | 35.082 | 305 | 185 | 6 | 505 | 804 | 477 | 773 | 2.07e-45 | 176 |
Msa0984510 | AT5G03340.1 | 39.689 | 257 | 146 | 5 | 505 | 758 | 204 | 454 | 5.77e-45 | 174 |
Msa0984510 | AT3G09840.1 | 34.641 | 306 | 185 | 6 | 505 | 804 | 477 | 773 | 3.14e-45 | 175 |
Msa0984510 | AT3G09840.1 | 39.300 | 257 | 147 | 5 | 505 | 758 | 204 | 454 | 1.35e-44 | 173 |
Msa0984510 | AT2G26140.1 | 43.404 | 235 | 122 | 7 | 496 | 725 | 215 | 443 | 5.45e-42 | 164 |
Msa0984510 | AT1G45000.1 | 37.037 | 270 | 153 | 9 | 499 | 758 | 133 | 395 | 9.31e-42 | 158 |
Msa0984510 | AT5G43010.1 | 37.218 | 266 | 154 | 8 | 499 | 756 | 133 | 393 | 9.76e-42 | 158 |
Msa0984510 | AT3G56690.1 | 36.496 | 274 | 160 | 7 | 471 | 735 | 685 | 953 | 4.69e-41 | 163 |
Msa0984510 | AT3G56690.1 | 35.176 | 199 | 122 | 4 | 539 | 733 | 415 | 610 | 6.66e-32 | 134 |
Msa0984510 | AT3G01610.2 | 34.076 | 314 | 184 | 7 | 504 | 804 | 229 | 532 | 1.24e-40 | 161 |
Msa0984510 | AT3G01610.2 | 36.555 | 238 | 143 | 5 | 505 | 738 | 525 | 758 | 4.80e-33 | 137 |
Msa0984510 | AT3G01610.1 | 34.076 | 314 | 184 | 7 | 504 | 804 | 229 | 532 | 1.27e-40 | 161 |
Msa0984510 | AT3G01610.1 | 36.555 | 238 | 143 | 5 | 505 | 738 | 525 | 758 | 4.80e-33 | 137 |
Msa0984510 | AT5G42270.1 | 39.357 | 249 | 139 | 7 | 502 | 741 | 244 | 489 | 1.57e-39 | 157 |
Msa0984510 | AT1G50250.1 | 39.357 | 249 | 139 | 7 | 502 | 741 | 256 | 501 | 2.30e-39 | 156 |
Msa0984510 | AT3G47060.1 | 41.410 | 227 | 122 | 5 | 505 | 723 | 322 | 545 | 1.10e-38 | 155 |
Msa0984510 | AT5G58290.1 | 36.522 | 230 | 139 | 4 | 505 | 729 | 152 | 379 | 3.79e-38 | 147 |
Msa0984510 | AT2G30950.4 | 40.083 | 242 | 137 | 6 | 504 | 740 | 227 | 465 | 5.87e-38 | 152 |
Msa0984510 | AT2G30950.1 | 40.083 | 242 | 137 | 6 | 504 | 740 | 223 | 461 | 6.13e-38 | 152 |
Msa0984510 | AT2G30950.2 | 40.083 | 242 | 137 | 6 | 504 | 740 | 223 | 461 | 6.13e-38 | 152 |
Msa0984510 | AT2G30950.3 | 40.083 | 242 | 137 | 6 | 504 | 740 | 223 | 461 | 6.13e-38 | 152 |
Msa0984510 | AT5G19990.1 | 38.095 | 231 | 133 | 6 | 506 | 729 | 159 | 386 | 8.82e-38 | 147 |
Msa0984510 | AT5G19990.3 | 38.095 | 231 | 133 | 6 | 506 | 729 | 159 | 386 | 8.82e-38 | 147 |
Msa0984510 | AT5G19990.2 | 38.095 | 231 | 133 | 6 | 506 | 729 | 101 | 328 | 1.02e-37 | 145 |
Msa0984510 | AT5G20000.1 | 38.095 | 231 | 133 | 6 | 506 | 729 | 159 | 386 | 1.15e-37 | 146 |
Msa0984510 | AT4G29040.1 | 36.614 | 254 | 145 | 7 | 506 | 746 | 186 | 436 | 1.91e-37 | 146 |
Msa0984510 | AT5G15250.1 | 41.333 | 225 | 124 | 6 | 504 | 723 | 220 | 441 | 2.18e-37 | 150 |
Msa0984510 | AT2G20140.1 | 36.957 | 230 | 136 | 5 | 506 | 729 | 186 | 412 | 2.26e-37 | 146 |
Msa0984510 | AT1G03000.1 | 35.060 | 251 | 155 | 7 | 505 | 749 | 655 | 903 | 2.44e-37 | 151 |
Msa0984510 | AT5G58870.1 | 40.529 | 227 | 124 | 5 | 505 | 723 | 326 | 549 | 4.56e-37 | 150 |
Msa0984510 | AT1G06430.1 | 41.333 | 225 | 124 | 6 | 504 | 723 | 216 | 437 | 4.74e-37 | 149 |
Msa0984510 | AT1G06430.3 | 41.333 | 225 | 124 | 6 | 504 | 723 | 216 | 437 | 4.74e-37 | 149 |
Msa0984510 | AT1G06430.2 | 41.333 | 225 | 124 | 6 | 504 | 723 | 216 | 437 | 4.74e-37 | 149 |
Msa0984510 | AT1G53750.1 | 37.118 | 229 | 137 | 4 | 505 | 728 | 165 | 391 | 6.10e-37 | 144 |
Msa0984510 | AT3G05530.1 | 35.683 | 227 | 139 | 4 | 507 | 728 | 170 | 394 | 4.23e-36 | 142 |
Msa0984510 | AT5G53170.1 | 39.147 | 258 | 144 | 8 | 491 | 743 | 346 | 595 | 6.81e-36 | 146 |
Msa0984510 | AT1G53780.1 | 37.333 | 225 | 130 | 5 | 506 | 723 | 338 | 558 | 3.73e-35 | 142 |
Msa0984510 | AT1G53780.4 | 37.333 | 225 | 130 | 5 | 506 | 723 | 338 | 558 | 3.73e-35 | 142 |
Msa0984510 | AT1G53780.3 | 37.333 | 225 | 130 | 5 | 506 | 723 | 337 | 557 | 4.09e-35 | 142 |
Msa0984510 | AT1G53780.2 | 37.333 | 225 | 130 | 5 | 506 | 723 | 359 | 579 | 4.15e-35 | 142 |
Msa0984510 | AT1G05910.1 | 38.655 | 238 | 134 | 6 | 505 | 733 | 378 | 612 | 8.09e-35 | 144 |
Msa0984510 | AT1G09100.1 | 35.088 | 228 | 139 | 5 | 507 | 728 | 169 | 393 | 2.86e-34 | 136 |
Msa0984510 | AT5G08470.1 | 35.865 | 237 | 142 | 5 | 507 | 738 | 843 | 1074 | 3.25e-34 | 142 |
Msa0984510 | AT5G08470.3 | 35.865 | 237 | 142 | 5 | 507 | 738 | 834 | 1065 | 3.39e-34 | 141 |
Msa0984510 | AT3G02450.1 | 36.328 | 256 | 153 | 6 | 505 | 754 | 331 | 582 | 6.43e-34 | 139 |
Msa0984510 | AT5G15250.2 | 37.500 | 248 | 124 | 7 | 504 | 723 | 220 | 464 | 6.96e-34 | 137 |
Msa0984510 | AT2G29080.1 | 37.611 | 226 | 131 | 6 | 505 | 723 | 319 | 541 | 1.65e-33 | 139 |
Msa0984510 | AT1G07510.1 | 36.564 | 227 | 133 | 6 | 505 | 723 | 324 | 547 | 2.48e-33 | 138 |
Msa0984510 | AT4G23940.1 | 37.238 | 239 | 134 | 5 | 504 | 729 | 426 | 661 | 2.83e-32 | 135 |
Msa0984510 | AT5G64580.1 | 35.018 | 277 | 162 | 8 | 494 | 755 | 301 | 574 | 1.11e-30 | 130 |
Msa0984510 | AT3G16290.1 | 35.193 | 233 | 141 | 7 | 503 | 729 | 405 | 633 | 2.70e-30 | 129 |
Msa0984510 | AT4G04180.1 | 32.389 | 247 | 153 | 6 | 505 | 742 | 316 | 557 | 6.02e-30 | 126 |
Msa0984510 | AT4G04180.2 | 32.389 | 247 | 153 | 6 | 505 | 742 | 311 | 552 | 6.14e-30 | 126 |
Msa0984510 | AT3G15120.2 | 33.603 | 247 | 145 | 8 | 492 | 723 | 708 | 950 | 1.56e-28 | 124 |
Msa0984510 | AT3G15120.1 | 33.603 | 247 | 145 | 8 | 492 | 723 | 698 | 940 | 1.59e-28 | 124 |
Msa0984510 | AT2G03670.1 | 36.975 | 238 | 132 | 5 | 505 | 731 | 283 | 513 | 4.03e-28 | 120 |
Msa0984510 | AT2G03670.1 | 33.333 | 246 | 150 | 6 | 498 | 731 | 12 | 255 | 9.03e-26 | 113 |
Msa0984510 | AT2G03670.2 | 33.333 | 246 | 150 | 6 | 498 | 731 | 12 | 255 | 1.71e-26 | 114 |
Msa0984510 | AT2G03670.2 | 38.889 | 144 | 75 | 2 | 505 | 640 | 283 | 421 | 6.88e-16 | 81.3 |
Msa0984510 | AT1G45000.2 | 41.096 | 146 | 77 | 5 | 499 | 640 | 133 | 273 | 7.59e-25 | 107 |
Msa0984510 | AT1G79560.3 | 34.466 | 206 | 106 | 7 | 542 | 729 | 526 | 720 | 1.62e-24 | 110 |
Msa0984510 | AT1G79560.1 | 34.466 | 206 | 106 | 7 | 542 | 729 | 526 | 720 | 1.72e-24 | 110 |
Msa0984510 | AT1G79560.2 | 34.466 | 206 | 106 | 7 | 542 | 729 | 526 | 720 | 1.81e-24 | 110 |
Msa0984510 | AT4G04910.1 | 33.778 | 225 | 123 | 9 | 539 | 742 | 247 | 466 | 5.95e-20 | 95.5 |
Msa0984510 | AT5G08470.2 | 34.667 | 150 | 91 | 3 | 507 | 654 | 843 | 987 | 1.98e-19 | 94.4 |
Msa0984510 | AT3G04340.1 | 29.412 | 238 | 143 | 8 | 491 | 716 | 774 | 998 | 1.28e-16 | 85.5 |
Msa0984510 | AT5G16930.1 | 29.224 | 219 | 101 | 7 | 541 | 721 | 397 | 599 | 7.50e-15 | 79.0 |
Msa0984510 | AT3G03060.1 | 28.440 | 218 | 104 | 6 | 541 | 721 | 385 | 587 | 3.98e-14 | 76.6 |
Msa0984510 | AT2G18330.1 | 27.700 | 213 | 114 | 6 | 541 | 719 | 384 | 590 | 2.24e-13 | 74.3 |
Msa0984510 | AT4G36580.1 | 31.250 | 144 | 91 | 4 | 541 | 682 | 381 | 518 | 1.70e-11 | 68.2 |
Find 171 sgRNAs with CRISPR-Local
Find 361 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTCATGTCTTCCATACTTAA+AGG | 0.156285 | 6_4:-29418350 | None:intergenic |
TTAGCATTTCACACTCTTAA+AGG | 0.163337 | 6_4:-29418786 | None:intergenic |
CGCGATATCGACGAGGTTTC+TGG | 0.168761 | 6_4:+29413316 | Msa0984510:CDS |
GATTCCCTCCAACCCATTTC+TGG | 0.189501 | 6_4:-29413294 | None:intergenic |
GTGAAATGCTAATTTCATTT+TGG | 0.199307 | 6_4:+29418797 | Msa0984510:three_prime_UTR |
CTGTTTCTGGAGGGTCTTAA+AGG | 0.201924 | 6_4:+29413166 | Msa0984510:five_prime_UTR |
AAAGGCCTCAAGATAATTTC+TGG | 0.223878 | 6_4:-29418332 | None:intergenic |
ATTGTTCCAGAAAATGATTC+TGG | 0.257437 | 6_4:-29413115 | None:intergenic |
TTCCACTACTCTTGCCTTCC+TGG | 0.264777 | 6_4:-29416177 | None:intergenic |
GGAACAATTCTTATACCTTT+TGG | 0.265596 | 6_4:+29413130 | Msa0984510:five_prime_UTR |
AGAACAAGAATTTGTTCATT+AGG | 0.265912 | 6_4:-29417156 | None:intergenic |
ACTTTGATCTCAATGTTATA+AGG | 0.277506 | 6_4:-29415770 | None:intergenic |
ATTAGTAATGGTGATTGTTA+TGG | 0.278421 | 6_4:+29419166 | Msa0984510:three_prime_UTR |
TATCTTGAGGCCTTTAAGTA+TGG | 0.293109 | 6_4:+29418340 | Msa0984510:CDS |
CATTGGGATGGACTATTATC+TGG | 0.315982 | 6_4:+29417132 | Msa0984510:CDS |
CTCAAGAGACTTGTTGTTGA+TGG | 0.320621 | 6_4:+29413358 | Msa0984510:CDS |
GTACAGTTGCAAAGCAGATT+TGG | 0.324617 | 6_4:+29414935 | Msa0984510:intron |
AGAATATGATTGCAAAGAAT+TGG | 0.327848 | 6_4:+29415724 | Msa0984510:CDS |
TGCTGTATTAACTCCCTTAC+AGG | 0.329399 | 6_4:-29418115 | None:intergenic |
CGCTTCTCGAACTCGTTGTC+CGG | 0.334969 | 6_4:-29416679 | None:intergenic |
TCAGGGATTGAGTCTGTTCC+AGG | 0.345579 | 6_4:+29416159 | Msa0984510:CDS |
TATTGTGTCATGTGAGGTTT+TGG | 0.351413 | 6_4:+29419017 | Msa0984510:three_prime_UTR |
TTGAGTGTTGGTGTTGGATT+AGG | 0.352827 | 6_4:+29413238 | Msa0984510:CDS |
CTTTGATCTCAATGTTATAA+GGG | 0.357775 | 6_4:-29415769 | None:intergenic |
TTGTTATGGATTGCATAAAA+TGG | 0.363087 | 6_4:+29419180 | Msa0984510:three_prime_UTR |
CGTTACAGGGATAGATTTCT+CGG | 0.365008 | 6_4:-29416534 | None:intergenic |
CTGGACAAGCTGTCCAGAAA+TGG | 0.368219 | 6_4:+29413281 | Msa0984510:CDS |
GTTGGACTTGGATTGAGTTC+TGG | 0.368529 | 6_4:+29413262 | Msa0984510:CDS |
GTAACACCTATCTCATTTGC+AGG | 0.369133 | 6_4:-29416721 | None:intergenic |
CCGTGATGAGTTTCATCTTC+GGG | 0.372898 | 6_4:-29415794 | None:intergenic |
TATATGCTTGCAGGAAGTTC+CGG | 0.375272 | 6_4:+29416660 | Msa0984510:intron |
AGAATGATAAATAAATTATC+AGG | 0.377788 | 6_4:+29415665 | Msa0984510:CDS |
CTGGATTTGTTGAACCACTT+TGG | 0.383287 | 6_4:-29415285 | None:intergenic |
TATATCTTTGGAACACTTGA+AGG | 0.383455 | 6_4:-29418888 | None:intergenic |
TTTGTTGAAATATACCCTTT+AGG | 0.383667 | 6_4:-29418835 | None:intergenic |
TAGTTGAACTTGTTATAGTT+TGG | 0.390380 | 6_4:+29419139 | Msa0984510:three_prime_UTR |
TGGATTTGTTGAACCACTTT+GGG | 0.393600 | 6_4:-29415284 | None:intergenic |
CAATGTGGACAGTTTGTCTC+AGG | 0.398322 | 6_4:+29416141 | Msa0984510:intron |
GAAGTAATGTGCTAAAGCTT+TGG | 0.401980 | 6_4:-29414783 | None:intergenic |
GTTATTATTTGAAGCATCTT+CGG | 0.409808 | 6_4:-29418297 | None:intergenic |
ACACGAAAACTTGGACTTCA+AGG | 0.412437 | 6_4:+29417943 | Msa0984510:CDS |
TGTCCACCATCACTTCAAAA+TGG | 0.416441 | 6_4:+29416950 | Msa0984510:CDS |
TTACCATTTGATGACTACTA+AGG | 0.424622 | 6_4:+29415997 | Msa0984510:CDS |
ATGACTTTGGAACGAATGTC+TGG | 0.424693 | 6_4:+29415121 | Msa0984510:CDS |
ATGAAACTCATCACGGTAGC+TGG | 0.425346 | 6_4:+29415801 | Msa0984510:CDS |
GAACGAATGTCTGGTTTGTT+TGG | 0.429036 | 6_4:+29415130 | Msa0984510:CDS |
TAATAATCTTCTAATACAAT+TGG | 0.432943 | 6_4:-29418993 | None:intergenic |
GAAAATGTTGACGATATTGC+CGG | 0.435344 | 6_4:+29416458 | Msa0984510:CDS |
TCTTCCATCTGCTGAGAATA+GGG | 0.436797 | 6_4:+29417886 | Msa0984510:CDS |
AAATGAATTCATGACACATT+GGG | 0.437919 | 6_4:+29417116 | Msa0984510:CDS |
GTTGGATTAGGTGTTGGACT+TGG | 0.438941 | 6_4:+29413250 | Msa0984510:CDS |
TTTGACACCAACGTTGTCTT+CGG | 0.444265 | 6_4:+29413042 | Msa0984510:five_prime_UTR |
GTCTTCCATCTGCTGAGAAT+AGG | 0.445088 | 6_4:+29417885 | Msa0984510:CDS |
CTCTTCGGTCCACCTGGTAC+TGG | 0.446428 | 6_4:+29416865 | Msa0984510:CDS |
TGTACGGCGAAGGCGGTTCA+AGG | 0.446430 | 6_4:+29418740 | Msa0984510:CDS |
CATGAAACAAGCTAAGAATC+AGG | 0.448416 | 6_4:+29418367 | Msa0984510:CDS |
TTTATTGTTGAGCAGGATCA+TGG | 0.455341 | 6_4:+29417859 | Msa0984510:intron |
AGTAAAATAGCCCTGCTTGC+CGG | 0.457963 | 6_4:-29414622 | None:intergenic |
TTTGTCACATATATCCTAAA+GGG | 0.458879 | 6_4:+29418821 | Msa0984510:three_prime_UTR |
ATCCCTTATGTATAAAATGA+TGG | 0.462540 | 6_4:-29415594 | None:intergenic |
ATGAGTTTCCTTATTACCTA+AGG | 0.463467 | 6_4:+29413404 | Msa0984510:CDS |
TGCTTCATTCGCAATCGCCT+TGG | 0.464021 | 6_4:-29416902 | None:intergenic |
GTTATCCCTGCAAATGAGAT+AGG | 0.467844 | 6_4:+29416715 | Msa0984510:CDS |
TGAGAGGTTTCTTGTGTGCT+TGG | 0.469934 | 6_4:-29414599 | None:intergenic |
GATAAATAAATTATCAGGTT+CGG | 0.471190 | 6_4:+29415670 | Msa0984510:CDS |
AAAGGAGAAACACGAAAACT+TGG | 0.474800 | 6_4:+29417934 | Msa0984510:CDS |
GTCAATATCCGAGATGACTT+TGG | 0.475208 | 6_4:+29415108 | Msa0984510:CDS |
CCTCTAGTTTCACCGGTTGA+AGG | 0.476239 | 6_4:-29415169 | None:intergenic |
GAAACCTCTCACCGGCAAGC+AGG | 0.479995 | 6_4:+29414611 | Msa0984510:CDS |
ATTTGTCACATATATCCTAA+AGG | 0.480477 | 6_4:+29418820 | Msa0984510:three_prime_UTR |
ATCGCTTCATCAAGATCAAA+TGG | 0.480594 | 6_4:-29417195 | None:intergenic |
ACCGTGATGAGTTTCATCTT+CGG | 0.482281 | 6_4:-29415795 | None:intergenic |
ATTCGCAGACATCGGTGCAT+TGG | 0.482826 | 6_4:+29416744 | Msa0984510:CDS |
GTTGGTGTTGGATTAGGTGT+TGG | 0.483479 | 6_4:+29413244 | Msa0984510:CDS |
GCATTCCTCCGTAGCCTTGG+AGG | 0.483535 | 6_4:-29415229 | None:intergenic |
TGAAGAGGTCTGGTCTCCTA+AGG | 0.485467 | 6_4:-29416807 | None:intergenic |
CAAAGTGGTTCAACAAATCC+AGG | 0.486761 | 6_4:+29415286 | Msa0984510:CDS |
AACTAGTTATCTCATCCAAT+AGG | 0.487374 | 6_4:+29416041 | Msa0984510:CDS |
TGTAGTAAATTAAATAACCT+TGG | 0.491357 | 6_4:-29415641 | None:intergenic |
ACCATCACTTCAAAATGGTT+CGG | 0.491372 | 6_4:+29416955 | Msa0984510:CDS |
TGGACAAGCTGTCCAGAAAT+GGG | 0.491969 | 6_4:+29413282 | Msa0984510:CDS |
AAGGCGATTGCGAATGAAGC+AGG | 0.496258 | 6_4:+29416904 | Msa0984510:CDS |
CTGCGGCTTATCGACCTGTA+AGG | 0.497062 | 6_4:+29418101 | Msa0984510:CDS |
GTTCCTTAGTAGTCATCAAA+TGG | 0.500837 | 6_4:-29416000 | None:intergenic |
GAGGCATTCCTCCGTAGCCT+TGG | 0.501564 | 6_4:-29415232 | None:intergenic |
AGCTAGTAATGCTTCCCCTT+AGG | 0.503492 | 6_4:+29416791 | Msa0984510:CDS |
AGTCCACCTTTGAAGAGGTC+TGG | 0.503700 | 6_4:-29416817 | None:intergenic |
TTTGTTCACGCTAGCAGCTA+AGG | 0.504388 | 6_4:+29417002 | Msa0984510:CDS |
AATATAGTTACTAAGTATCA+TGG | 0.507857 | 6_4:-29415948 | None:intergenic |
CGAATAATCCTCCAAGGCTA+CGG | 0.511174 | 6_4:+29415221 | Msa0984510:CDS |
TTATACGACGGTTCGAGCGC+AGG | 0.512691 | 6_4:+29417217 | Msa0984510:CDS |
ACCATGACAGAAGGATTTAG+TGG | 0.514138 | 6_4:+29417974 | Msa0984510:CDS |
CCTCACATCATTCTTTGCGC+CGG | 0.514346 | 6_4:-29416477 | None:intergenic |
GGTTGAAGGCGTCATTGAAA+AGG | 0.514365 | 6_4:-29415155 | None:intergenic |
AAAATGAATTCATGACACAT+TGG | 0.516818 | 6_4:+29417115 | Msa0984510:CDS |
ATTTCCCTATTCTCAGCAGA+TGG | 0.517657 | 6_4:-29417890 | None:intergenic |
TCAGCATTGAGTGTTGGTGT+TGG | 0.519229 | 6_4:+29413232 | Msa0984510:CDS |
TAGTTTGGTTCAATTAGTAA+TGG | 0.522387 | 6_4:+29419154 | Msa0984510:three_prime_UTR |
TGTAGAGGTATATTACTCTT+CGG | 0.523785 | 6_4:+29416850 | Msa0984510:CDS |
TCAGGTTCGGTGTTGATACT+CGG | 0.524130 | 6_4:+29415683 | Msa0984510:CDS |
ATTTAGTGGAAGTGATCTAA+AGG | 0.528579 | 6_4:+29417988 | Msa0984510:CDS |
TTGCAAAGAATTGGATGAAA+GGG | 0.533277 | 6_4:+29415733 | Msa0984510:CDS |
TGCATCAGAAGGTTCAGTAA+TGG | 0.535925 | 6_4:+29418693 | Msa0984510:CDS |
ATCAAGATCAAATGGTCTGT+TGG | 0.536190 | 6_4:-29417187 | None:intergenic |
TCCACTAAATCCTTCTGTCA+TGG | 0.536524 | 6_4:-29417975 | None:intergenic |
ATTGCAAAGAATTGGATGAA+AGG | 0.538974 | 6_4:+29415732 | Msa0984510:CDS |
CCTTAAAACTCTTATGTCAA+AGG | 0.539255 | 6_4:+29417916 | Msa0984510:CDS |
CAAAGTACCTCTAGTTTCAC+CGG | 0.539464 | 6_4:-29415176 | None:intergenic |
TCATTTGCAGGGATAACCTC+TGG | 0.541654 | 6_4:-29416709 | None:intergenic |
TGTTACTGATTTCTCTGTGA+AGG | 0.546550 | 6_4:+29414829 | Msa0984510:CDS |
CTGCTAGCGTGAACAAAGCT+CGG | 0.548824 | 6_4:-29416996 | None:intergenic |
AAACCTCTCACCGGCAAGCA+GGG | 0.550772 | 6_4:+29414612 | Msa0984510:CDS |
CATCAAATGGTAAGAAATTG+CGG | 0.550828 | 6_4:-29415987 | None:intergenic |
AGTAGCACTTCTTCCCAAAG+TGG | 0.551337 | 6_4:+29415271 | Msa0984510:CDS |
ACTCATCACGGTAGCTGGAA+AGG | 0.552060 | 6_4:+29415806 | Msa0984510:CDS |
CAAGCTGTCCAGAAATGGGT+TGG | 0.554692 | 6_4:+29413286 | Msa0984510:CDS |
TAGCCCTGCTTGCCGGTGAG+AGG | 0.558044 | 6_4:-29414615 | None:intergenic |
GATGAAGTTGACAGCATGCT+CGG | 0.560044 | 6_4:+29417048 | Msa0984510:CDS |
GAAGAGGTCTGGTCTCCTAA+GGG | 0.560343 | 6_4:-29416806 | None:intergenic |
CTGTCCAGAAATGGGTTGGA+GGG | 0.561405 | 6_4:+29413290 | Msa0984510:CDS |
TTGTTGAGCAGGATCATGGT+TGG | 0.570569 | 6_4:+29417863 | Msa0984510:intron |
TTCCAGGAAGGCAAGAGTAG+TGG | 0.572341 | 6_4:+29416175 | Msa0984510:CDS |
AATTGGATGAAAGGGTCGCT+AGG | 0.573099 | 6_4:+29415741 | Msa0984510:CDS |
GCTGTCCAGAAATGGGTTGG+AGG | 0.574922 | 6_4:+29413289 | Msa0984510:CDS |
ATATCTTTGGAACACTTGAA+GGG | 0.575428 | 6_4:-29418887 | None:intergenic |
TGTAAGGGAGTTAATACAGC+AGG | 0.578490 | 6_4:+29418117 | Msa0984510:CDS |
TTAGAAGTCCACCTTTGAAG+AGG | 0.579176 | 6_4:-29416822 | None:intergenic |
ATATTACTCTTCGGTCCACC+TGG | 0.580870 | 6_4:+29416859 | Msa0984510:CDS |
CATTCGTTCCAAAGTCATCT+CGG | 0.581888 | 6_4:-29415116 | None:intergenic |
TGCGGCTTATCGACCTGTAA+GGG | 0.583988 | 6_4:+29418102 | Msa0984510:CDS |
GGGTATATTTCAACAAAGCA+AGG | 0.585307 | 6_4:+29418841 | Msa0984510:three_prime_UTR |
CTCGGTCAGCGTACTAGAGT+CGG | 0.585382 | 6_4:+29417066 | Msa0984510:CDS |
AAACAATGGAATGAATTGTA+CGG | 0.586269 | 6_4:+29418724 | Msa0984510:CDS |
AAGGAACCAGAATACCGAAA+CGG | 0.589801 | 6_4:+29416016 | Msa0984510:CDS |
TGGAATGAATTGTACGGCGA+AGG | 0.590358 | 6_4:+29418730 | Msa0984510:CDS |
TAATGGCTGAGCTAAAACAA+TGG | 0.592183 | 6_4:+29418710 | Msa0984510:CDS |
AATGAATTGTACGGCGAAGG+CGG | 0.593092 | 6_4:+29418733 | Msa0984510:CDS |
AATGTGGACAGTTTGTCTCA+GGG | 0.594638 | 6_4:+29416142 | Msa0984510:intron |
GAATTCATGACACATTGGGA+TGG | 0.601740 | 6_4:+29417120 | Msa0984510:CDS |
TACTAGAGTCGGAGAACATG+AGG | 0.602554 | 6_4:+29417077 | Msa0984510:CDS |
TATTAGTATTGTGTCATGTG+AGG | 0.603209 | 6_4:+29419011 | Msa0984510:three_prime_UTR |
GATTGTATCATAAATGACAA+TGG | 0.603570 | 6_4:+29419238 | Msa0984510:three_prime_UTR |
AAAATTCGAATAATCCTCCA+AGG | 0.603879 | 6_4:+29415215 | Msa0984510:CDS |
AGGAGACCAGACCTCTTCAA+AGG | 0.619937 | 6_4:+29416811 | Msa0984510:CDS |
CCGCGAGTACTTCAGCAATG+TGG | 0.624242 | 6_4:-29415877 | None:intergenic |
GGTGTTACATTCGCAGACAT+CGG | 0.629703 | 6_4:+29416736 | Msa0984510:CDS |
GAACTAGCAACCATGACAGA+AGG | 0.634509 | 6_4:+29417965 | Msa0984510:CDS |
TCGGAGAACATGAGGCCATG+AGG | 0.634732 | 6_4:+29417085 | Msa0984510:CDS |
TCATCGACGAATATAATAGT+CGG | 0.640660 | 6_4:-29417030 | None:intergenic |
ATAATCCTCCAAGGCTACGG+AGG | 0.641401 | 6_4:+29415224 | Msa0984510:CDS |
AGACCAGACCTCTTCAAAGG+TGG | 0.645548 | 6_4:+29416814 | Msa0984510:CDS |
TAACACCTATCTCATTTGCA+GGG | 0.646749 | 6_4:-29416720 | None:intergenic |
CCTTCAACCGGTGAAACTAG+AGG | 0.647499 | 6_4:+29415169 | Msa0984510:CDS |
CCACATTGCTGAAGTACTCG+CGG | 0.647923 | 6_4:+29415877 | Msa0984510:CDS |
GGACTTCTAAAGCCATGTAG+AGG | 0.650465 | 6_4:+29416835 | Msa0984510:CDS |
CGAGAAGCGAATTAGACCAG+AGG | 0.653973 | 6_4:+29416693 | Msa0984510:CDS |
ATGAACCAGAAATTATCTTG+AGG | 0.656439 | 6_4:+29418327 | Msa0984510:CDS |
AAGAGGTCTGGTCTCCTAAG+GGG | 0.660614 | 6_4:-29416805 | None:intergenic |
ACAGAATTTGTGCATAACTG+CGG | 0.664862 | 6_4:+29418084 | Msa0984510:intron |
GCACACAAGAAACCTCTCAC+CGG | 0.666148 | 6_4:+29414603 | Msa0984510:CDS |
AAGAGTAATATACCTCTACA+TGG | 0.666188 | 6_4:-29416847 | None:intergenic |
GGATTGAGTCTGTTCCAGGA+AGG | 0.670020 | 6_4:+29416163 | Msa0984510:CDS |
GAAGACTAATGATTCTAACA+AGG | 0.670841 | 6_4:+29416204 | Msa0984510:CDS |
AGCACCAGAAAATAAAAGTG+AGG | 0.671744 | 6_4:+29416511 | Msa0984510:CDS |
ACTTAGATCAGACACAGCAG+AGG | 0.682474 | 6_4:-29415251 | None:intergenic |
CCCGAAGATGAAACTCATCA+CGG | 0.682827 | 6_4:+29415794 | Msa0984510:CDS |
AGCTTGTTCTCAAATCACCA+AGG | 0.697268 | 6_4:+29415624 | Msa0984510:CDS |
TTGATGAAGCGATTATACGA+CGG | 0.711157 | 6_4:+29417205 | Msa0984510:CDS |
AGGGAATCGCGATATCGACG+AGG | 0.712493 | 6_4:+29413309 | Msa0984510:CDS |
CCGGCGCAAAGAATGATGTG+AGG | 0.713348 | 6_4:+29416477 | Msa0984510:CDS |
AAAGACTCCGAAGACAACGT+TGG | 0.719596 | 6_4:-29413049 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATTAAAAAAAAAATTACCTT+AGG | - | chr6_4:29413423-29413442 | None:intergenic | 10.0% |
!!! | TAAATTTTTAGGTTTTTTAA+TGG | - | chr6_4:29417527-29417546 | None:intergenic | 10.0% |
!! | TGTTTATAAATTATATGCTT+CGG | - | chr6_4:29414096-29414115 | None:intergenic | 15.0% |
!!! | TAATTTTTTTGTTTTGTAAC+CGG | + | chr6_4:29414857-29414876 | Msa0984510:intron | 15.0% |
!! | AGAATGATAAATAAATTATC+AGG | + | chr6_4:29415665-29415684 | Msa0984510:CDS | 15.0% |
!! | AAATAAAATAGTTTAAGTGA+AGG | + | chr6_4:29417425-29417444 | Msa0984510:intron | 15.0% |
!! | AATAAAATAGTTTAAGTGAA+GGG | + | chr6_4:29417426-29417445 | Msa0984510:intron | 15.0% |
!!! | ATAATAAAGATATCGATTTT+CGG | - | chr6_4:29417476-29417495 | None:intergenic | 15.0% |
!! | CATTCTCAATAAAAAATTTA+TGG | - | chr6_4:29417565-29417584 | None:intergenic | 15.0% |
!! | TAATAATCTTCTAATACAAT+TGG | - | chr6_4:29418996-29419015 | None:intergenic | 15.0% |
!!! | ACCAAATATTTTTGATGTTA+TGG | + | chr6_4:29413189-29413208 | Msa0984510:exon | 20.0% |
!! | TCCATAACATCAAAAATATT+TGG | - | chr6_4:29413193-29413212 | None:intergenic | 20.0% |
!! | AAAAATTACCTTAGGTAATA+AGG | - | chr6_4:29413415-29413434 | None:intergenic | 20.0% |
!! | TGTGTTAGTATATGATATAA+TGG | + | chr6_4:29413517-29413536 | Msa0984510:intron | 20.0% |
!! | ATATGATATAATGGTGTTTA+TGG | + | chr6_4:29413526-29413545 | Msa0984510:intron | 20.0% |
!! | ATGAAAATCTAAGAAAGATT+GGG | - | chr6_4:29413719-29413738 | None:intergenic | 20.0% |
!! | AATGAAAATCTAAGAAAGAT+TGG | - | chr6_4:29413720-29413739 | None:intergenic | 20.0% |
!! | AAGAATAGAAAATTGCAAAA+AGG | - | chr6_4:29414039-29414058 | None:intergenic | 20.0% |
!! | AGCATATAATTTATAAACAC+CGG | + | chr6_4:29414097-29414116 | Msa0984510:intron | 20.0% |
!! | ATTGAAAGCAAAAGAAAAAA+AGG | - | chr6_4:29414420-29414439 | None:intergenic | 20.0% |
!!! | TTTTCTTTTGCTTTCAATTT+AGG | + | chr6_4:29414422-29414441 | Msa0984510:intron | 20.0% |
!! | AAACAAGTATTAGTCAAAAA+AGG | - | chr6_4:29414725-29414744 | None:intergenic | 20.0% |
!! | TAAAAGTAGATCGATTATTT+GGG | - | chr6_4:29415360-29415379 | None:intergenic | 20.0% |
!! | ATAAAAGTAGATCGATTATT+TGG | - | chr6_4:29415361-29415380 | None:intergenic | 20.0% |
!!! | ATTCCATCATTTTATACATA+AGG | + | chr6_4:29415591-29415610 | Msa0984510:CDS | 20.0% |
!!! | TTCCATCATTTTATACATAA+GGG | + | chr6_4:29415592-29415611 | Msa0984510:CDS | 20.0% |
!! | TGTAGTAAATTAAATAACCT+TGG | - | chr6_4:29415644-29415663 | None:intergenic | 20.0% |
!! | GATAAATAAATTATCAGGTT+CGG | + | chr6_4:29415670-29415689 | Msa0984510:CDS | 20.0% |
!! | AATATAGTTACTAAGTATCA+TGG | - | chr6_4:29415951-29415970 | None:intergenic | 20.0% |
!! | TCGATATCTTTATTATACAT+AGG | + | chr6_4:29417480-29417499 | Msa0984510:intron | 20.0% |
!! | GGATAAAGTATATAAATGAA+TGG | - | chr6_4:29417613-29417632 | None:intergenic | 20.0% |
!! | ATTATTTGAATGTGCATTTA+TGG | + | chr6_4:29417748-29417767 | Msa0984510:intron | 20.0% |
!! | AAATAGTGTTCATAATTGAT+GGG | - | chr6_4:29417784-29417803 | None:intergenic | 20.0% |
!! | AAAATAGTGTTCATAATTGA+TGG | - | chr6_4:29417785-29417804 | None:intergenic | 20.0% |
!!! | AATATTTTTTATTGTTGAGC+AGG | + | chr6_4:29417852-29417871 | Msa0984510:intron | 20.0% |
!! | TATAATATTCAAAAAGCTAG+CGG | + | chr6_4:29418535-29418554 | Msa0984510:intron | 20.0% |
!! | GAGATGTTATTATTTCAAAA+AGG | + | chr6_4:29418919-29418938 | Msa0984510:intron | 20.0% |
!!! | AGTTTTTTTTTTGCACCAAA+AGG | - | chr6_4:29413148-29413167 | None:intergenic | 25.0% |
! | TGCAAAAAAAAAACTGTTTC+TGG | + | chr6_4:29413153-29413172 | Msa0984510:five_prime_UTR | 25.0% |
!!! | AAAAAAAAAACTGTTTCTGG+AGG | + | chr6_4:29413156-29413175 | Msa0984510:five_prime_UTR | 25.0% |
!!! | AAAAAAAAACTGTTTCTGGA+GGG | + | chr6_4:29413157-29413176 | Msa0984510:five_prime_UTR | 25.0% |
!! | ATGGTGTTTATGGTAATTTT+TGG | + | chr6_4:29413536-29413555 | Msa0984510:intron | 25.0% |
!! | TGGTGTTTATGGTAATTTTT+GGG | + | chr6_4:29413537-29413556 | Msa0984510:intron | 25.0% |
! | AAATCTATCTTAATAGATCC+AGG | - | chr6_4:29413581-29413600 | None:intergenic | 25.0% |
!! | AATTTCATGTTCTGAATCTT+TGG | + | chr6_4:29413604-29413623 | Msa0984510:intron | 25.0% |
! | ATCTTTGGACATATAAATCT+TGG | + | chr6_4:29413619-29413638 | Msa0984510:intron | 25.0% |
! | TCTTTGGACATATAAATCTT+GGG | + | chr6_4:29413620-29413639 | Msa0984510:intron | 25.0% |
!! | GATGAATTTTCTTTGATTGT+TGG | + | chr6_4:29413665-29413684 | Msa0984510:intron | 25.0% |
!! | AATTTTCTTTGATTGTTGGT+TGG | + | chr6_4:29413669-29413688 | Msa0984510:intron | 25.0% |
! | TAATTACAGATGAATTGTTC+GGG | - | chr6_4:29413868-29413887 | None:intergenic | 25.0% |
! | CTAATTACAGATGAATTGTT+CGG | - | chr6_4:29413869-29413888 | None:intergenic | 25.0% |
!!! | TGGTTTCTTAGAGTTTTATT+TGG | + | chr6_4:29413915-29413934 | Msa0984510:intron | 25.0% |
!! | TTTTACAACTTCTATGAAGA+GGG | - | chr6_4:29414012-29414031 | None:intergenic | 25.0% |
!! | TTTTTACAACTTCTATGAAG+AGG | - | chr6_4:29414013-29414032 | None:intergenic | 25.0% |
! | TTCATATAATCTATCCAAGA+TGG | + | chr6_4:29414149-29414168 | Msa0984510:intron | 25.0% |
! | ATCTATGATTGACATAGTTT+AGG | - | chr6_4:29414478-29414497 | None:intergenic | 25.0% |
!!! | TAATCACATGTTTTTTCATC+TGG | + | chr6_4:29414502-29414521 | Msa0984510:intron | 25.0% |
! | TCTATGTATATGTATACAAC+CGG | - | chr6_4:29414879-29414898 | None:intergenic | 25.0% |
! | TGTAGTTCAAAATTATAACC+TGG | - | chr6_4:29415307-29415326 | None:intergenic | 25.0% |
! | ATGTTACCTTAACCATATTT+AGG | + | chr6_4:29415326-29415345 | Msa0984510:intron | 25.0% |
! | ATCAAACCTAAATATGGTTA+AGG | - | chr6_4:29415335-29415354 | None:intergenic | 25.0% |
! | ATCCCTTATGTATAAAATGA+TGG | - | chr6_4:29415597-29415616 | None:intergenic | 25.0% |
! | AGAATATGATTGCAAAGAAT+TGG | + | chr6_4:29415724-29415743 | Msa0984510:CDS | 25.0% |
! | CTTTGATCTCAATGTTATAA+GGG | - | chr6_4:29415772-29415791 | None:intergenic | 25.0% |
! | ACTTTGATCTCAATGTTATA+AGG | - | chr6_4:29415773-29415792 | None:intergenic | 25.0% |
! | TTGTGAAGATATTTACCTAT+TGG | - | chr6_4:29416059-29416078 | None:intergenic | 25.0% |
! | AATGCAAACGAAAATATGAT+AGG | - | chr6_4:29416336-29416355 | None:intergenic | 25.0% |
!!! | CGATTTGTTTTCTTTATGTT+AGG | + | chr6_4:29416436-29416455 | Msa0984510:intron | 25.0% |
! | AAATAAGCAGTATACAGTTT+AGG | - | chr6_4:29416617-29416636 | None:intergenic | 25.0% |
! | AATTAATTGTATATGCTTGC+AGG | + | chr6_4:29416651-29416670 | Msa0984510:intron | 25.0% |
!!! | TTCATTTTTAATCTTCCTCA+TGG | - | chr6_4:29417103-29417122 | None:intergenic | 25.0% |
! | AAAATGAATTCATGACACAT+TGG | + | chr6_4:29417115-29417134 | Msa0984510:CDS | 25.0% |
! | AAATGAATTCATGACACATT+GGG | + | chr6_4:29417116-29417135 | Msa0984510:CDS | 25.0% |
!! | AGAACAAGAATTTGTTCATT+AGG | - | chr6_4:29417159-29417178 | None:intergenic | 25.0% |
! | AAAAAACTCAAGTATTCGAT+TGG | + | chr6_4:29417384-29417403 | Msa0984510:intron | 25.0% |
!! | TTTTTATTGAGAATGAAGCA+TGG | + | chr6_4:29417570-29417589 | Msa0984510:intron | 25.0% |
! | TTTACATTGGATAGAGAAAT+TGG | - | chr6_4:29418192-29418211 | None:intergenic | 25.0% |
!! | GCTCATACTAAATTTTACAT+TGG | - | chr6_4:29418205-29418224 | None:intergenic | 25.0% |
!! | GTTATTATTTGAAGCATCTT+CGG | - | chr6_4:29418300-29418319 | None:intergenic | 25.0% |
!! | ATTTAGTTTCATGTATATCG+CGG | - | chr6_4:29418590-29418609 | None:intergenic | 25.0% |
! | AAACAATGGAATGAATTGTA+CGG | + | chr6_4:29418724-29418743 | Msa0984510:CDS | 25.0% |
!! | GTGAAATGCTAATTTCATTT+TGG | + | chr6_4:29418797-29418816 | Msa0984510:three_prime_UTR | 25.0% |
! | ATTTGTCACATATATCCTAA+AGG | + | chr6_4:29418820-29418839 | Msa0984510:three_prime_UTR | 25.0% |
! | TTTGTCACATATATCCTAAA+GGG | + | chr6_4:29418821-29418840 | Msa0984510:three_prime_UTR | 25.0% |
! | TTTGTTGAAATATACCCTTT+AGG | - | chr6_4:29418838-29418857 | None:intergenic | 25.0% |
!!! | TCTCTTAGCTTTTATATCTT+TGG | - | chr6_4:29418903-29418922 | None:intergenic | 25.0% |
! | TTATTTCAAAAAGGATGCTT+AGG | + | chr6_4:29418928-29418947 | Msa0984510:intron | 25.0% |
!!! | TAGTTGAACTTGTTATAGTT+TGG | + | chr6_4:29419139-29419158 | Msa0984510:three_prime_UTR | 25.0% |
!! | TAGTTTGGTTCAATTAGTAA+TGG | + | chr6_4:29419154-29419173 | Msa0984510:three_prime_UTR | 25.0% |
! | ATTAGTAATGGTGATTGTTA+TGG | + | chr6_4:29419166-29419185 | Msa0984510:three_prime_UTR | 25.0% |
!! | TTGTTATGGATTGCATAAAA+TGG | + | chr6_4:29419180-29419199 | Msa0984510:three_prime_UTR | 25.0% |
! | GATTGTATCATAAATGACAA+TGG | + | chr6_4:29419238-29419257 | Msa0984510:three_prime_UTR | 25.0% |
ATTGTTCCAGAAAATGATTC+TGG | - | chr6_4:29413118-29413137 | None:intergenic | 30.0% | |
! | GGAACAATTCTTATACCTTT+TGG | + | chr6_4:29413130-29413149 | Msa0984510:five_prime_UTR | 30.0% |
ATGAGTTTCCTTATTACCTA+AGG | + | chr6_4:29413404-29413423 | Msa0984510:CDS | 30.0% | |
!! | TTTTAATGATGTTTGAGACC+TGG | + | chr6_4:29413560-29413579 | Msa0984510:intron | 30.0% |
! | AAACTCTAAGAAACCAAGTT+TGG | - | chr6_4:29413911-29413930 | None:intergenic | 30.0% |
GGCATATAATGCCATAATAA+AGG | + | chr6_4:29413936-29413955 | Msa0984510:intron | 30.0% | |
!! | CCAGATTTTAGCCTTTATTA+TGG | - | chr6_4:29413950-29413969 | None:intergenic | 30.0% |
CCATAATAAAGGCTAAAATC+TGG | + | chr6_4:29413947-29413966 | Msa0984510:intron | 30.0% | |
CTGATCTTTAAATTCCATCT+TGG | - | chr6_4:29414166-29414185 | None:intergenic | 30.0% | |
! | GTTCTCTGAAAAGCTATTAT+CGG | + | chr6_4:29414192-29414211 | Msa0984510:intron | 30.0% |
!!! | CATGTTTTTTAGTTGTGACA+GGG | - | chr6_4:29414300-29414319 | None:intergenic | 30.0% |
! | TTTTTGTGTAGTGTTTCAGA+AGG | + | chr6_4:29415086-29415105 | Msa0984510:intron | 30.0% |
AAAATTCGAATAATCCTCCA+AGG | + | chr6_4:29415215-29415234 | Msa0984510:CDS | 30.0% | |
!! | TTTTGTACAGTCACTTTACA+AGG | + | chr6_4:29415461-29415480 | Msa0984510:CDS | 30.0% |
ATTGCAAAGAATTGGATGAA+AGG | + | chr6_4:29415732-29415751 | Msa0984510:CDS | 30.0% | |
TTGCAAAGAATTGGATGAAA+GGG | + | chr6_4:29415733-29415752 | Msa0984510:CDS | 30.0% | |
! | TTTTCATGTCTTCTTCTAGT+TGG | - | chr6_4:29415832-29415851 | None:intergenic | 30.0% |
CATCAAATGGTAAGAAATTG+CGG | - | chr6_4:29415990-29416009 | None:intergenic | 30.0% | |
! | TTACCATTTGATGACTACTA+AGG | + | chr6_4:29415997-29416016 | Msa0984510:CDS | 30.0% |
!!! | AGATAACTAGTTTTCCGTTT+CGG | - | chr6_4:29416033-29416052 | None:intergenic | 30.0% |
AACTAGTTATCTCATCCAAT+AGG | + | chr6_4:29416041-29416060 | Msa0984510:CDS | 30.0% | |
ACTGATCTTGTATATCAATG+TGG | + | chr6_4:29416126-29416145 | Msa0984510:intron | 30.0% | |
GAAGACTAATGATTCTAACA+AGG | + | chr6_4:29416204-29416223 | Msa0984510:CDS | 30.0% | |
!! | ATTGATCTTACTGCTTTTAC+AGG | - | chr6_4:29416584-29416603 | None:intergenic | 30.0% |
AAGAGTAATATACCTCTACA+TGG | - | chr6_4:29416850-29416869 | None:intergenic | 30.0% | |
! | TGTAGAGGTATATTACTCTT+CGG | + | chr6_4:29416850-29416869 | Msa0984510:CDS | 30.0% |
TGAATGTGACTTTGTTCTAA+TGG | - | chr6_4:29417312-29417331 | None:intergenic | 30.0% | |
GTTTAAGTGAAGGGTAAAAT+TGG | + | chr6_4:29417435-29417454 | Msa0984510:intron | 30.0% | |
CTTTATCCTTATGAGTTATG+AGG | + | chr6_4:29417625-29417644 | Msa0984510:intron | 30.0% | |
ATCCATGTGAAAAATAAGAG+TGG | - | chr6_4:29417654-29417673 | None:intergenic | 30.0% | |
! | CCTTTGACATAAGAGTTTTA+AGG | - | chr6_4:29417919-29417938 | None:intergenic | 30.0% |
CCTTAAAACTCTTATGTCAA+AGG | + | chr6_4:29417916-29417935 | Msa0984510:CDS | 30.0% | |
ATTTAGTGGAAGTGATCTAA+AGG | + | chr6_4:29417988-29418007 | Msa0984510:CDS | 30.0% | |
TCAGGAAAAGAAGAAAAAAG+AGG | + | chr6_4:29418259-29418278 | Msa0984510:intron | 30.0% | |
ATGAACCAGAAATTATCTTG+AGG | + | chr6_4:29418327-29418346 | Msa0984510:CDS | 30.0% | |
TTCATGTCTTCCATACTTAA+AGG | - | chr6_4:29418353-29418372 | None:intergenic | 30.0% | |
ACTATCGAGTAATTAAGTAG+CGG | + | chr6_4:29418421-29418440 | Msa0984510:intron | 30.0% | |
!! | TACAAAGTGTTGTCAAATAG+AGG | + | chr6_4:29418511-29418530 | Msa0984510:intron | 30.0% |
ATCGATGAATGTTTATATGC+AGG | + | chr6_4:29418657-29418676 | Msa0984510:intron | 30.0% | |
TTAGCATTTCACACTCTTAA+AGG | - | chr6_4:29418789-29418808 | None:intergenic | 30.0% | |
!! | ATATCTTTGGAACACTTGAA+GGG | - | chr6_4:29418890-29418909 | None:intergenic | 30.0% |
!! | TATATCTTTGGAACACTTGA+AGG | - | chr6_4:29418891-29418910 | None:intergenic | 30.0% |
TATTAGTATTGTGTCATGTG+AGG | + | chr6_4:29419011-29419030 | Msa0984510:three_prime_UTR | 30.0% | |
!! | TTTTTGTCAGCATTGAGTGT+TGG | + | chr6_4:29413226-29413245 | Msa0984510:CDS | 35.0% |
AAATCTTGGGACTTTCCAAA+TGG | + | chr6_4:29413633-29413652 | Msa0984510:intron | 35.0% | |
AATCTTGGGACTTTCCAAAT+GGG | + | chr6_4:29413634-29413653 | Msa0984510:intron | 35.0% | |
!!! | ATCTTAACCTCCCACTTTTT+GGG | + | chr6_4:29413753-29413772 | Msa0984510:intron | 35.0% |
ATCATGACCAGAACAATCAT+TGG | - | chr6_4:29413830-29413849 | None:intergenic | 35.0% | |
TTATATGCTTCGGATCAGAA+CGG | - | chr6_4:29414086-29414105 | None:intergenic | 35.0% | |
CTGATGTATACTAATCAGAC+CGG | - | chr6_4:29414119-29414138 | None:intergenic | 35.0% | |
AAAAAGACAGGCAAGTGAAA+AGG | + | chr6_4:29414234-29414253 | Msa0984510:intron | 35.0% | |
ATTAGTCCTAAAACCGACAA+TGG | - | chr6_4:29414264-29414283 | None:intergenic | 35.0% | |
!!! | CCATGTTTTTTAGTTGTGAC+AGG | - | chr6_4:29414301-29414320 | None:intergenic | 35.0% |
CCTGTCACAACTAAAAAACA+TGG | + | chr6_4:29414298-29414317 | Msa0984510:intron | 35.0% | |
TTATGTCGAGCAAAGAGTAA+AGG | + | chr6_4:29414329-29414348 | Msa0984510:intron | 35.0% | |
CTTGTACATAATATACCTGC+AGG | - | chr6_4:29414655-29414674 | None:intergenic | 35.0% | |
GAAGTAATGTGCTAAAGCTT+TGG | - | chr6_4:29414786-29414805 | None:intergenic | 35.0% | |
!! | TGTTACTGATTTCTCTGTGA+AGG | + | chr6_4:29414829-29414848 | Msa0984510:CDS | 35.0% |
!!! | AGACTTACTGGTTCTTTTCT+TGG | - | chr6_4:29414965-29414984 | None:intergenic | 35.0% |
AAGTTGCAAGTTAGACTTAC+TGG | - | chr6_4:29414977-29414996 | None:intergenic | 35.0% | |
!! | TGGATTTGTTGAACCACTTT+GGG | - | chr6_4:29415287-29415306 | None:intergenic | 35.0% |
TGGGTGATCAAACCTAAATA+TGG | - | chr6_4:29415341-29415360 | None:intergenic | 35.0% | |
GTTCCTTAGTAGTCATCAAA+TGG | - | chr6_4:29416003-29416022 | None:intergenic | 35.0% | |
AGCATGTCAAGCTAAACAAT+AGG | + | chr6_4:29416303-29416322 | Msa0984510:intron | 35.0% | |
GAAAATGTTGACGATATTGC+CGG | + | chr6_4:29416458-29416477 | Msa0984510:CDS | 35.0% | |
!!! | CACTTTTATTTTCTGGTGCT+TGG | - | chr6_4:29416511-29416530 | None:intergenic | 35.0% |
AGCACCAGAAAATAAAAGTG+AGG | + | chr6_4:29416511-29416530 | Msa0984510:CDS | 35.0% | |
ATCCCTGTAACGAAAAAAGA+AGG | + | chr6_4:29416545-29416564 | Msa0984510:CDS | 35.0% | |
TAACACCTATCTCATTTGCA+GGG | - | chr6_4:29416723-29416742 | None:intergenic | 35.0% | |
ACCATCACTTCAAAATGGTT+CGG | + | chr6_4:29416955-29416974 | Msa0984510:CDS | 35.0% | |
ATCAAGATCAAATGGTCTGT+TGG | - | chr6_4:29417190-29417209 | None:intergenic | 35.0% | |
ATCGCTTCATCAAGATCAAA+TGG | - | chr6_4:29417198-29417217 | None:intergenic | 35.0% | |
TTGATGAAGCGATTATACGA+CGG | + | chr6_4:29417205-29417224 | Msa0984510:CDS | 35.0% | |
GCTAACAATAAGACAAGATG+TGG | - | chr6_4:29417248-29417267 | None:intergenic | 35.0% | |
CATAGGTATAGATGAACAAC+TGG | + | chr6_4:29417497-29417516 | Msa0984510:intron | 35.0% | |
!!! | GTCCACTCTTATTTTTCACA+TGG | + | chr6_4:29417649-29417668 | Msa0984510:intron | 35.0% |
TTTATTGTTGAGCAGGATCA+TGG | + | chr6_4:29417859-29417878 | Msa0984510:intron | 35.0% | |
AAAGGAGAAACACGAAAACT+TGG | + | chr6_4:29417934-29417953 | Msa0984510:CDS | 35.0% | |
ACAGAATTTGTGCATAACTG+CGG | + | chr6_4:29418084-29418103 | Msa0984510:intron | 35.0% | |
AATACAGCAGGAGAAAAAGA+AGG | + | chr6_4:29418129-29418148 | Msa0984510:CDS | 35.0% | |
TACCAATTGCTTCTTATGTC+AGG | + | chr6_4:29418241-29418260 | Msa0984510:intron | 35.0% | |
TTCCTGACATAAGAAGCAAT+TGG | - | chr6_4:29418246-29418265 | None:intergenic | 35.0% | |
AAAGGCCTCAAGATAATTTC+TGG | - | chr6_4:29418335-29418354 | None:intergenic | 35.0% | |
TATCTTGAGGCCTTTAAGTA+TGG | + | chr6_4:29418340-29418359 | Msa0984510:CDS | 35.0% | |
CATGAAACAAGCTAAGAATC+AGG | + | chr6_4:29418367-29418386 | Msa0984510:CDS | 35.0% | |
AAACAAGCTAAGAATCAGGT+AGG | + | chr6_4:29418371-29418390 | Msa0984510:intron | 35.0% | |
TAATTAAGTAGCGGCTATAG+TGG | + | chr6_4:29418430-29418449 | Msa0984510:intron | 35.0% | |
GATGAATGTTTATATGCAGG+TGG | + | chr6_4:29418660-29418679 | Msa0984510:intron | 35.0% | |
TAATGGCTGAGCTAAAACAA+TGG | + | chr6_4:29418710-29418729 | Msa0984510:CDS | 35.0% | |
GGGTATATTTCAACAAAGCA+AGG | + | chr6_4:29418841-29418860 | Msa0984510:three_prime_UTR | 35.0% | |
!!! | AGAGGGCTCTAGAATTTTTT+TGG | + | chr6_4:29418951-29418970 | Msa0984510:intron | 35.0% |
! | TATTGTGTCATGTGAGGTTT+TGG | + | chr6_4:29419017-29419036 | Msa0984510:three_prime_UTR | 35.0% |
TTTGACACCAACGTTGTCTT+CGG | + | chr6_4:29413042-29413061 | Msa0984510:five_prime_UTR | 40.0% | |
! | CTCTCTCCAGAATCATTTTC+TGG | + | chr6_4:29413109-29413128 | Msa0984510:five_prime_UTR | 40.0% |
!! | TTGAGTGTTGGTGTTGGATT+AGG | + | chr6_4:29413238-29413257 | Msa0984510:CDS | 40.0% |
!! | CTCAAGAGACTTGTTGTTGA+TGG | + | chr6_4:29413358-29413377 | Msa0984510:CDS | 40.0% |
ATCTTGGGACTTTCCAAATG+GGG | + | chr6_4:29413635-29413654 | Msa0984510:intron | 40.0% | |
TTCATCACAGAAACCCCATT+TGG | - | chr6_4:29413651-29413670 | None:intergenic | 40.0% | |
!! | GATCTTAACCTCCCACTTTT+TGG | + | chr6_4:29413752-29413771 | Msa0984510:intron | 40.0% |
TGGTAATCCAAAGTTAGGTC+AGG | + | chr6_4:29413787-29413806 | Msa0984510:intron | 40.0% | |
CTTATCTCCTGACCTAACTT+TGG | - | chr6_4:29413797-29413816 | None:intergenic | 40.0% | |
AGTCAGACCAATGATTGTTC+TGG | + | chr6_4:29413820-29413839 | Msa0984510:intron | 40.0% | |
TTCTGGTCATGATTTGAGCT+CGG | + | chr6_4:29413837-29413856 | Msa0984510:intron | 40.0% | |
TTAACCACTTGAGCCAAACT+TGG | + | chr6_4:29413895-29413914 | Msa0984510:intron | 40.0% | |
CTTCCTTGAAGGAAAAAGAC+AGG | + | chr6_4:29414222-29414241 | Msa0984510:intron | 40.0% | |
! | TTGCCTGTCTTTTTCCTTCA+AGG | - | chr6_4:29414228-29414247 | None:intergenic | 40.0% |
!!! | TTTTTAGTTGTGACAGGGCA+AGG | - | chr6_4:29414295-29414314 | None:intergenic | 40.0% |
!! | AGCAGGGCTATTTTACTTTC+TGG | + | chr6_4:29414628-29414647 | Msa0984510:CDS | 40.0% |
!! | ATTTTACTTTCTGGTCCTGC+AGG | + | chr6_4:29414637-29414656 | Msa0984510:CDS | 40.0% |
TCTGCTTTGCAACTGTACAA+GGG | - | chr6_4:29414933-29414952 | None:intergenic | 40.0% | |
ATCTGCTTTGCAACTGTACA+AGG | - | chr6_4:29414934-29414953 | None:intergenic | 40.0% | |
GTACAGTTGCAAAGCAGATT+TGG | + | chr6_4:29414935-29414954 | Msa0984510:intron | 40.0% | |
GTCAATATCCGAGATGACTT+TGG | + | chr6_4:29415108-29415127 | Msa0984510:CDS | 40.0% | |
CATTCGTTCCAAAGTCATCT+CGG | - | chr6_4:29415119-29415138 | None:intergenic | 40.0% | |
!! | ATGACTTTGGAACGAATGTC+TGG | + | chr6_4:29415121-29415140 | Msa0984510:CDS | 40.0% |
!! | GAACGAATGTCTGGTTTGTT+TGG | + | chr6_4:29415130-29415149 | Msa0984510:CDS | 40.0% |
! | TTTTCAATGACGCCTTCAAC+CGG | + | chr6_4:29415157-29415176 | Msa0984510:CDS | 40.0% |
! | CAAAGTACCTCTAGTTTCAC+CGG | - | chr6_4:29415179-29415198 | None:intergenic | 40.0% |
!! | CTGGATTTGTTGAACCACTT+TGG | - | chr6_4:29415288-29415307 | None:intergenic | 40.0% |
CAAAGTGGTTCAACAAATCC+AGG | + | chr6_4:29415286-29415305 | Msa0984510:CDS | 40.0% | |
CTAACAACCTACCTTTGTAC+CGG | + | chr6_4:29415530-29415549 | Msa0984510:intron | 40.0% | |
CAAAACCTGCAAAATTGAGC+CGG | - | chr6_4:29415552-29415571 | None:intergenic | 40.0% | |
! | GGCTCAATTTTGCAGGTTTT+GGG | + | chr6_4:29415551-29415570 | Msa0984510:intron | 40.0% |
! | AGCTTGTTCTCAAATCACCA+AGG | + | chr6_4:29415624-29415643 | Msa0984510:CDS | 40.0% |
ACCGTGATGAGTTTCATCTT+CGG | - | chr6_4:29415798-29415817 | None:intergenic | 40.0% | |
AAGGAACCAGAATACCGAAA+CGG | + | chr6_4:29416016-29416035 | Msa0984510:CDS | 40.0% | |
! | AGTTTTCCGTTTCGGTATTC+TGG | - | chr6_4:29416025-29416044 | None:intergenic | 40.0% |
AATGTGGACAGTTTGTCTCA+GGG | + | chr6_4:29416142-29416161 | Msa0984510:intron | 40.0% | |
GCAATAGGCATATCAAAGCT+AGG | - | chr6_4:29416266-29416285 | None:intergenic | 40.0% | |
ACATGCTCTTACGTATTCCT+CGG | - | chr6_4:29416290-29416309 | None:intergenic | 40.0% | |
!!! | TCGGCCTCACTTTTATTTTC+TGG | - | chr6_4:29416518-29416537 | None:intergenic | 40.0% |
CGTTACAGGGATAGATTTCT+CGG | - | chr6_4:29416537-29416556 | None:intergenic | 40.0% | |
!!! | CGCCTTCTTTTTTCGTTACA+GGG | - | chr6_4:29416550-29416569 | None:intergenic | 40.0% |
!!! | TCGCCTTCTTTTTTCGTTAC+AGG | - | chr6_4:29416551-29416570 | None:intergenic | 40.0% |
TATATGCTTGCAGGAAGTTC+CGG | + | chr6_4:29416660-29416679 | Msa0984510:intron | 40.0% | |
GTTATCCCTGCAAATGAGAT+AGG | + | chr6_4:29416715-29416734 | Msa0984510:CDS | 40.0% | |
GTAACACCTATCTCATTTGC+AGG | - | chr6_4:29416724-29416743 | None:intergenic | 40.0% | |
! | TTAGAAGTCCACCTTTGAAG+AGG | - | chr6_4:29416825-29416844 | None:intergenic | 40.0% |
!! | ATTGTTTTTCCAGTACCAGG+TGG | - | chr6_4:29416877-29416896 | None:intergenic | 40.0% |
!! | AGCATTGTTTTTCCAGTACC+AGG | - | chr6_4:29416880-29416899 | None:intergenic | 40.0% |
TGGAAAAACAATGCTAGCCA+AGG | + | chr6_4:29416885-29416904 | Msa0984510:CDS | 40.0% | |
TGTCCACCATCACTTCAAAA+TGG | + | chr6_4:29416950-29416969 | Msa0984510:CDS | 40.0% | |
!!! | GAACCATTTTGAAGTGATGG+TGG | - | chr6_4:29416956-29416975 | None:intergenic | 40.0% |
!!! | TCCGAACCATTTTGAAGTGA+TGG | - | chr6_4:29416959-29416978 | None:intergenic | 40.0% |
GAATTCATGACACATTGGGA+TGG | + | chr6_4:29417120-29417139 | Msa0984510:CDS | 40.0% | |
!! | CATTGGGATGGACTATTATC+TGG | + | chr6_4:29417132-29417151 | Msa0984510:CDS | 40.0% |
TGGACACCTCATAACTCATA+AGG | - | chr6_4:29417634-29417653 | None:intergenic | 40.0% | |
TCTTCCATCTGCTGAGAATA+GGG | + | chr6_4:29417886-29417905 | Msa0984510:CDS | 40.0% | |
ATTTCCCTATTCTCAGCAGA+TGG | - | chr6_4:29417893-29417912 | None:intergenic | 40.0% | |
ACACGAAAACTTGGACTTCA+AGG | + | chr6_4:29417943-29417962 | Msa0984510:CDS | 40.0% | |
ACCATGACAGAAGGATTTAG+TGG | + | chr6_4:29417974-29417993 | Msa0984510:CDS | 40.0% | |
TCCACTAAATCCTTCTGTCA+TGG | - | chr6_4:29417978-29417997 | None:intergenic | 40.0% | |
TGCTGTATTAACTCCCTTAC+AGG | - | chr6_4:29418118-29418137 | None:intergenic | 40.0% | |
TGTAAGGGAGTTAATACAGC+AGG | + | chr6_4:29418117-29418136 | Msa0984510:CDS | 40.0% | |
GCAGGAGAAAAAGAAGGAAA+TGG | + | chr6_4:29418135-29418154 | Msa0984510:CDS | 40.0% | |
! | TTCATGTATATCGCGGATTG+TGG | - | chr6_4:29418583-29418602 | None:intergenic | 40.0% |
TGCATCAGAAGGTTCAGTAA+TGG | + | chr6_4:29418693-29418712 | Msa0984510:CDS | 40.0% | |
TCAAAAAGGATGCTTAGGAG+AGG | + | chr6_4:29418933-29418952 | Msa0984510:intron | 40.0% | |
CAAAAAGGATGCTTAGGAGA+GGG | + | chr6_4:29418934-29418953 | Msa0984510:intron | 40.0% | |
AAAGACTCCGAAGACAACGT+TGG | - | chr6_4:29413052-29413071 | None:intergenic | 45.0% | |
!! | CTGTTTCTGGAGGGTCTTAA+AGG | + | chr6_4:29413166-29413185 | Msa0984510:five_prime_UTR | 45.0% |
!! | TCAGCATTGAGTGTTGGTGT+TGG | + | chr6_4:29413232-29413251 | Msa0984510:CDS | 45.0% |
!! | GTTGGTGTTGGATTAGGTGT+TGG | + | chr6_4:29413244-29413263 | Msa0984510:CDS | 45.0% |
!! | GTTGGATTAGGTGTTGGACT+TGG | + | chr6_4:29413250-29413269 | Msa0984510:CDS | 45.0% |
GTTGGACTTGGATTGAGTTC+TGG | + | chr6_4:29413262-29413281 | Msa0984510:CDS | 45.0% | |
TGGACAAGCTGTCCAGAAAT+GGG | + | chr6_4:29413282-29413301 | Msa0984510:CDS | 45.0% | |
!!! | ACCTCCCACTTTTTGGGAAA+AGG | + | chr6_4:29413759-29413778 | Msa0984510:intron | 45.0% |
!!! | CCTCCCACTTTTTGGGAAAA+GGG | + | chr6_4:29413760-29413779 | Msa0984510:intron | 45.0% |
!!! | CTCCCACTTTTTGGGAAAAG+GGG | + | chr6_4:29413761-29413780 | Msa0984510:intron | 45.0% |
! | AGCCCCTTTTCCCAAAAAGT+GGG | - | chr6_4:29413766-29413785 | None:intergenic | 45.0% |
! | GGCTCTGGTAATCCAAAGTT+AGG | + | chr6_4:29413782-29413801 | Msa0984510:intron | 45.0% |
TCTGGTCATGATTTGAGCTC+GGG | + | chr6_4:29413838-29413857 | Msa0984510:intron | 45.0% | |
! | GAAACCAAGTTTGGCTCAAG+TGG | - | chr6_4:29413902-29413921 | None:intergenic | 45.0% |
!! | TCTGGTTCATGCTAGTTCTG+TGG | + | chr6_4:29413965-29413984 | Msa0984510:intron | 45.0% |
TCGGTGAAACACTTCCTTGA+AGG | + | chr6_4:29414211-29414230 | Msa0984510:intron | 45.0% | |
AGTCCTAAAACCGACAATGG+CGG | - | chr6_4:29414261-29414280 | None:intergenic | 45.0% | |
TGAGAGGTTTCTTGTGTGCT+TGG | - | chr6_4:29414602-29414621 | None:intergenic | 45.0% | |
AGTAAAATAGCCCTGCTTGC+CGG | - | chr6_4:29414625-29414644 | None:intergenic | 45.0% | |
!! | GGTTGAAGGCGTCATTGAAA+AGG | - | chr6_4:29415158-29415177 | None:intergenic | 45.0% |
CGAATAATCCTCCAAGGCTA+CGG | + | chr6_4:29415221-29415240 | Msa0984510:CDS | 45.0% | |
ACTTAGATCAGACACAGCAG+AGG | - | chr6_4:29415254-29415273 | None:intergenic | 45.0% | |
AGTAGCACTTCTTCCCAAAG+TGG | + | chr6_4:29415271-29415290 | Msa0984510:CDS | 45.0% | |
AATTGAGCCGGTACAAAGGT+AGG | - | chr6_4:29415540-29415559 | None:intergenic | 45.0% | |
GCAAAATTGAGCCGGTACAA+AGG | - | chr6_4:29415544-29415563 | None:intergenic | 45.0% | |
!!! | TTGTACCGGCTCAATTTTGC+AGG | + | chr6_4:29415544-29415563 | Msa0984510:intron | 45.0% |
! | CGGCTCAATTTTGCAGGTTT+TGG | + | chr6_4:29415550-29415569 | Msa0984510:intron | 45.0% |
!!! | CAGGTTTTGGGTTCTATCTC+AGG | + | chr6_4:29415563-29415582 | Msa0984510:intron | 45.0% |
!! | TCAGGTTCGGTGTTGATACT+CGG | + | chr6_4:29415683-29415702 | Msa0984510:CDS | 45.0% |
AATTGGATGAAAGGGTCGCT+AGG | + | chr6_4:29415741-29415760 | Msa0984510:CDS | 45.0% | |
CCGTGATGAGTTTCATCTTC+GGG | - | chr6_4:29415797-29415816 | None:intergenic | 45.0% | |
CCCGAAGATGAAACTCATCA+CGG | + | chr6_4:29415794-29415813 | Msa0984510:CDS | 45.0% | |
ATGAAACTCATCACGGTAGC+TGG | + | chr6_4:29415801-29415820 | Msa0984510:CDS | 45.0% | |
CAATGTGGACAGTTTGTCTC+AGG | + | chr6_4:29416141-29416160 | Msa0984510:intron | 45.0% | |
TTGATATGCCTATTGCACCG+AGG | + | chr6_4:29416270-29416289 | Msa0984510:intron | 45.0% | |
! | TACGTATTCCTCGGTGCAAT+AGG | - | chr6_4:29416281-29416300 | None:intergenic | 45.0% |
!! | CTTACTGCTTTTACAGGCAC+TGG | - | chr6_4:29416578-29416597 | None:intergenic | 45.0% |
TCATTTGCAGGGATAACCTC+TGG | - | chr6_4:29416712-29416731 | None:intergenic | 45.0% | |
! | GGTGTTACATTCGCAGACAT+CGG | + | chr6_4:29416736-29416755 | Msa0984510:CDS | 45.0% |
AGCTAGTAATGCTTCCCCTT+AGG | + | chr6_4:29416791-29416810 | Msa0984510:CDS | 45.0% | |
!! | GGACTTCTAAAGCCATGTAG+AGG | + | chr6_4:29416835-29416854 | Msa0984510:CDS | 45.0% |
ATATTACTCTTCGGTCCACC+TGG | + | chr6_4:29416859-29416878 | Msa0984510:CDS | 45.0% | |
TTTGTTCACGCTAGCAGCTA+AGG | + | chr6_4:29417002-29417021 | Msa0984510:CDS | 45.0% | |
GATGAAGTTGACAGCATGCT+CGG | + | chr6_4:29417048-29417067 | Msa0984510:CDS | 45.0% | |
TACTAGAGTCGGAGAACATG+AGG | + | chr6_4:29417077-29417096 | Msa0984510:CDS | 45.0% | |
CAGCAACAGTTTCTGTCTCT+TGG | + | chr6_4:29417717-29417736 | Msa0984510:intron | 45.0% | |
TTGTTGAGCAGGATCATGGT+TGG | + | chr6_4:29417863-29417882 | Msa0984510:intron | 45.0% | |
GTCTTCCATCTGCTGAGAAT+AGG | + | chr6_4:29417885-29417904 | Msa0984510:CDS | 45.0% | |
GAACTAGCAACCATGACAGA+AGG | + | chr6_4:29417965-29417984 | Msa0984510:CDS | 45.0% | |
! | TCGCGGATTGTGGAAAATAG+TGG | - | chr6_4:29418573-29418592 | None:intergenic | 45.0% |
! | GCTGCAAGTTTTGCATCAGA+AGG | + | chr6_4:29418682-29418701 | Msa0984510:CDS | 45.0% |
TGGAATGAATTGTACGGCGA+AGG | + | chr6_4:29418730-29418749 | Msa0984510:CDS | 45.0% | |
AATGAATTGTACGGCGAAGG+CGG | + | chr6_4:29418733-29418752 | Msa0984510:CDS | 45.0% | |
!!! | TAATTATATTTATATTTTTG+TGG | + | chr6_4:29413476-29413495 | Msa0984510:intron | 5.0% |
!!! | AATTATATTTATATTTTTGT+GGG | + | chr6_4:29413477-29413496 | Msa0984510:intron | 5.0% |
!!! | TTTGTTAATTATAAATTTTT+AGG | - | chr6_4:29417538-29417557 | None:intergenic | 5.0% |
!! | CAAAAAATAAAATAATTAAT+CGG | - | chr6_4:29418026-29418045 | None:intergenic | 5.0% |
CTGGACAAGCTGTCCAGAAA+TGG | + | chr6_4:29413281-29413300 | Msa0984510:CDS | 50.0% | |
CAAGCTGTCCAGAAATGGGT+TGG | + | chr6_4:29413286-29413305 | Msa0984510:CDS | 50.0% | |
!! | CTGTCCAGAAATGGGTTGGA+GGG | + | chr6_4:29413290-29413309 | Msa0984510:CDS | 50.0% |
GATTCCCTCCAACCCATTTC+TGG | - | chr6_4:29413297-29413316 | None:intergenic | 50.0% | |
! | CCCTTTTCCCAAAAAGTGGG+AGG | - | chr6_4:29413763-29413782 | None:intergenic | 50.0% |
! | GAGCCCCTTTTCCCAAAAAG+TGG | - | chr6_4:29413767-29413786 | None:intergenic | 50.0% |
!! | CTTTTTGGGAAAAGGGGCTC+TGG | + | chr6_4:29413767-29413786 | Msa0984510:intron | 50.0% |
GTGAAAAGGACCGCCATTGT+CGG | + | chr6_4:29414248-29414267 | Msa0984510:intron | 50.0% | |
GCACACAAGAAACCTCTCAC+CGG | + | chr6_4:29414603-29414622 | Msa0984510:CDS | 50.0% | |
! | CCTCTAGTTTCACCGGTTGA+AGG | - | chr6_4:29415172-29415191 | None:intergenic | 50.0% |
CCTTCAACCGGTGAAACTAG+AGG | + | chr6_4:29415169-29415188 | Msa0984510:CDS | 50.0% | |
ATAATCCTCCAAGGCTACGG+AGG | + | chr6_4:29415224-29415243 | Msa0984510:CDS | 50.0% | |
ACTCATCACGGTAGCTGGAA+AGG | + | chr6_4:29415806-29415825 | Msa0984510:CDS | 50.0% | |
! | CCACATTGCTGAAGTACTCG+CGG | + | chr6_4:29415877-29415896 | Msa0984510:CDS | 50.0% |
TCAGGGATTGAGTCTGTTCC+AGG | + | chr6_4:29416159-29416178 | Msa0984510:CDS | 50.0% | |
GGATTGAGTCTGTTCCAGGA+AGG | + | chr6_4:29416163-29416182 | Msa0984510:CDS | 50.0% | |
TTCCAGGAAGGCAAGAGTAG+TGG | + | chr6_4:29416175-29416194 | Msa0984510:CDS | 50.0% | |
TTCCACTACTCTTGCCTTCC+TGG | - | chr6_4:29416180-29416199 | None:intergenic | 50.0% | |
CCTCACATCATTCTTTGCGC+CGG | - | chr6_4:29416480-29416499 | None:intergenic | 50.0% | |
CGAGAAGCGAATTAGACCAG+AGG | + | chr6_4:29416693-29416712 | Msa0984510:CDS | 50.0% | |
ATTCGCAGACATCGGTGCAT+TGG | + | chr6_4:29416744-29416763 | Msa0984510:CDS | 50.0% | |
AAGAGGTCTGGTCTCCTAAG+GGG | - | chr6_4:29416808-29416827 | None:intergenic | 50.0% | |
GAAGAGGTCTGGTCTCCTAA+GGG | - | chr6_4:29416809-29416828 | None:intergenic | 50.0% | |
TGAAGAGGTCTGGTCTCCTA+AGG | - | chr6_4:29416810-29416829 | None:intergenic | 50.0% | |
AGGAGACCAGACCTCTTCAA+AGG | + | chr6_4:29416811-29416830 | Msa0984510:CDS | 50.0% | |
AGACCAGACCTCTTCAAAGG+TGG | + | chr6_4:29416814-29416833 | Msa0984510:CDS | 50.0% | |
! | AGTCCACCTTTGAAGAGGTC+TGG | - | chr6_4:29416820-29416839 | None:intergenic | 50.0% |
TGCTTCATTCGCAATCGCCT+TGG | - | chr6_4:29416905-29416924 | None:intergenic | 50.0% | |
AAGGCGATTGCGAATGAAGC+AGG | + | chr6_4:29416904-29416923 | Msa0984510:CDS | 50.0% | |
CTGCTAGCGTGAACAAAGCT+CGG | - | chr6_4:29416999-29417018 | None:intergenic | 50.0% | |
TGCGGCTTATCGACCTGTAA+GGG | + | chr6_4:29418102-29418121 | Msa0984510:CDS | 50.0% | |
!! | GCTGTCCAGAAATGGGTTGG+AGG | + | chr6_4:29413289-29413308 | Msa0984510:CDS | 55.0% |
AGGGAATCGCGATATCGACG+AGG | + | chr6_4:29413309-29413328 | Msa0984510:CDS | 55.0% | |
CGCGATATCGACGAGGTTTC+TGG | + | chr6_4:29413316-29413335 | Msa0984510:CDS | 55.0% | |
!!! | GGACCGCCATTGTCGGTTTT+AGG | + | chr6_4:29414255-29414274 | Msa0984510:intron | 55.0% |
AAACCTCTCACCGGCAAGCA+GGG | + | chr6_4:29414612-29414631 | Msa0984510:CDS | 55.0% | |
CCGCGAGTACTTCAGCAATG+TGG | - | chr6_4:29415880-29415899 | None:intergenic | 55.0% | |
GATCAGCAGTATGCGCAGCA+GGG | - | chr6_4:29416366-29416385 | None:intergenic | 55.0% | |
TGATCAGCAGTATGCGCAGC+AGG | - | chr6_4:29416367-29416386 | None:intergenic | 55.0% | |
TGCTGCGCATACTGCTGATC+AGG | + | chr6_4:29416366-29416385 | Msa0984510:intron | 55.0% | |
GCTGCGCATACTGCTGATCA+GGG | + | chr6_4:29416367-29416386 | Msa0984510:intron | 55.0% | |
CCGGCGCAAAGAATGATGTG+AGG | + | chr6_4:29416477-29416496 | Msa0984510:CDS | 55.0% | |
CGCTTCTCGAACTCGTTGTC+CGG | - | chr6_4:29416682-29416701 | None:intergenic | 55.0% | |
CTCGGTCAGCGTACTAGAGT+CGG | + | chr6_4:29417066-29417085 | Msa0984510:CDS | 55.0% | |
TCGGAGAACATGAGGCCATG+AGG | + | chr6_4:29417085-29417104 | Msa0984510:CDS | 55.0% | |
TTATACGACGGTTCGAGCGC+AGG | + | chr6_4:29417217-29417236 | Msa0984510:CDS | 55.0% | |
CTGCGGCTTATCGACCTGTA+AGG | + | chr6_4:29418101-29418120 | Msa0984510:CDS | 55.0% | |
GAAACCTCTCACCGGCAAGC+AGG | + | chr6_4:29414611-29414630 | Msa0984510:CDS | 60.0% | |
! | GCATTCCTCCGTAGCCTTGG+AGG | - | chr6_4:29415232-29415251 | None:intergenic | 60.0% |
! | GAGGCATTCCTCCGTAGCCT+TGG | - | chr6_4:29415235-29415254 | None:intergenic | 60.0% |
CTCTTCGGTCCACCTGGTAC+TGG | + | chr6_4:29416865-29416884 | Msa0984510:CDS | 60.0% | |
TGTACGGCGAAGGCGGTTCA+AGG | + | chr6_4:29418740-29418759 | Msa0984510:CDS | 60.0% | |
TAGCCCTGCTTGCCGGTGAG+AGG | - | chr6_4:29414618-29414637 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6_4 | gene | 29413036 | 29419269 | 29413036 | ID=Msa0984510;Name=Msa0984510 |
chr6_4 | mRNA | 29413036 | 29419269 | 29413036 | ID=Msa0984510-mRNA-1;Parent=Msa0984510;Name=Msa0984510-mRNA-1;_AED=0.10;_eAED=0.10;_QI=172|1|1|1|0.92|0.86|15|444|818 |
chr6_4 | exon | 29413036 | 29413425 | 29413036 | ID=Msa0984510-mRNA-1:exon:8040;Parent=Msa0984510-mRNA-1 |
chr6_4 | exon | 29414537 | 29414658 | 29414537 | ID=Msa0984510-mRNA-1:exon:8041;Parent=Msa0984510-mRNA-1 |
chr6_4 | exon | 29414762 | 29414850 | 29414762 | ID=Msa0984510-mRNA-1:exon:8042;Parent=Msa0984510-mRNA-1 |
chr6_4 | exon | 29414941 | 29414976 | 29414941 | ID=Msa0984510-mRNA-1:exon:8043;Parent=Msa0984510-mRNA-1 |
chr6_4 | exon | 29415097 | 29415307 | 29415097 | ID=Msa0984510-mRNA-1:exon:8044;Parent=Msa0984510-mRNA-1 |
chr6_4 | exon | 29415418 | 29415482 | 29415418 | ID=Msa0984510-mRNA-1:exon:8045;Parent=Msa0984510-mRNA-1 |
chr6_4 | exon | 29415566 | 29416062 | 29415566 | ID=Msa0984510-mRNA-1:exon:8046;Parent=Msa0984510-mRNA-1 |
chr6_4 | exon | 29416153 | 29416225 | 29416153 | ID=Msa0984510-mRNA-1:exon:8047;Parent=Msa0984510-mRNA-1 |
chr6_4 | exon | 29416458 | 29416592 | 29416458 | ID=Msa0984510-mRNA-1:exon:8048;Parent=Msa0984510-mRNA-1 |
chr6_4 | exon | 29416673 | 29417238 | 29416673 | ID=Msa0984510-mRNA-1:exon:8049;Parent=Msa0984510-mRNA-1 |
chr6_4 | exon | 29417874 | 29418009 | 29417874 | ID=Msa0984510-mRNA-1:exon:8050;Parent=Msa0984510-mRNA-1 |
chr6_4 | exon | 29418088 | 29418156 | 29418088 | ID=Msa0984510-mRNA-1:exon:8051;Parent=Msa0984510-mRNA-1 |
chr6_4 | exon | 29418263 | 29418388 | 29418263 | ID=Msa0984510-mRNA-1:exon:8052;Parent=Msa0984510-mRNA-1 |
chr6_4 | exon | 29418679 | 29418921 | 29418679 | ID=Msa0984510-mRNA-1:exon:8053;Parent=Msa0984510-mRNA-1 |
chr6_4 | exon | 29418955 | 29419269 | 29418955 | ID=Msa0984510-mRNA-1:exon:8054;Parent=Msa0984510-mRNA-1 |
chr6_4 | five_prime_UTR | 29413036 | 29413207 | 29413036 | ID=Msa0984510-mRNA-1:five_prime_utr;Parent=Msa0984510-mRNA-1 |
chr6_4 | CDS | 29413208 | 29413425 | 29413208 | ID=Msa0984510-mRNA-1:cds;Parent=Msa0984510-mRNA-1 |
chr6_4 | CDS | 29414537 | 29414658 | 29414537 | ID=Msa0984510-mRNA-1:cds;Parent=Msa0984510-mRNA-1 |
chr6_4 | CDS | 29414762 | 29414850 | 29414762 | ID=Msa0984510-mRNA-1:cds;Parent=Msa0984510-mRNA-1 |
chr6_4 | CDS | 29414941 | 29414976 | 29414941 | ID=Msa0984510-mRNA-1:cds;Parent=Msa0984510-mRNA-1 |
chr6_4 | CDS | 29415097 | 29415307 | 29415097 | ID=Msa0984510-mRNA-1:cds;Parent=Msa0984510-mRNA-1 |
chr6_4 | CDS | 29415418 | 29415482 | 29415418 | ID=Msa0984510-mRNA-1:cds;Parent=Msa0984510-mRNA-1 |
chr6_4 | CDS | 29415566 | 29416062 | 29415566 | ID=Msa0984510-mRNA-1:cds;Parent=Msa0984510-mRNA-1 |
chr6_4 | CDS | 29416153 | 29416225 | 29416153 | ID=Msa0984510-mRNA-1:cds;Parent=Msa0984510-mRNA-1 |
chr6_4 | CDS | 29416458 | 29416592 | 29416458 | ID=Msa0984510-mRNA-1:cds;Parent=Msa0984510-mRNA-1 |
chr6_4 | CDS | 29416673 | 29417238 | 29416673 | ID=Msa0984510-mRNA-1:cds;Parent=Msa0984510-mRNA-1 |
chr6_4 | CDS | 29417874 | 29418009 | 29417874 | ID=Msa0984510-mRNA-1:cds;Parent=Msa0984510-mRNA-1 |
chr6_4 | CDS | 29418088 | 29418156 | 29418088 | ID=Msa0984510-mRNA-1:cds;Parent=Msa0984510-mRNA-1 |
chr6_4 | CDS | 29418263 | 29418388 | 29418263 | ID=Msa0984510-mRNA-1:cds;Parent=Msa0984510-mRNA-1 |
chr6_4 | CDS | 29418679 | 29418792 | 29418679 | ID=Msa0984510-mRNA-1:cds;Parent=Msa0984510-mRNA-1 |
chr6_4 | three_prime_UTR | 29418793 | 29418921 | 29418793 | ID=Msa0984510-mRNA-1:three_prime_utr;Parent=Msa0984510-mRNA-1 |
chr6_4 | three_prime_UTR | 29418955 | 29419269 | 29418955 | ID=Msa0984510-mRNA-1:three_prime_utr;Parent=Msa0984510-mRNA-1 |
Gene Sequence |
Protein sequence |