Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0893630 | AES76469.1 | 74.713 | 87 | 22 | 0 | 7 | 93 | 18 | 104 | 5.97e-37 | 130 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0893630 | sp|Q682I1|BOLA1_ARATH | 67.797 | 59 | 19 | 0 | 30 | 88 | 97 | 155 | 2.71e-22 | 87.8 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0893630 | G7KL80 | 74.713 | 87 | 22 | 0 | 7 | 93 | 18 | 104 | 2.85e-37 | 130 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0893630 | Msa0893690 | 0.813422 | 2.580997e-51 | -8.615850e-47 |
| Msa0893630 | Msa1133390 | 0.981213 | 4.808860e-152 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0893630 | MtrunA17_Chr6g0481551 | 74.713 | 87 | 22 | 0 | 7 | 93 | 18 | 104 | 5.49e-41 | 130 |
| Msa0893630 | MtrunA17_Chr1g0170001 | 63.333 | 60 | 21 | 1 | 30 | 89 | 292 | 350 | 6.95e-20 | 82.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0893630 | AT1G55805.1 | 67.797 | 59 | 19 | 0 | 30 | 88 | 97 | 155 | 2.75e-23 | 87.8 |
| Msa0893630 | AT4G26500.1 | 66.129 | 62 | 19 | 1 | 30 | 89 | 310 | 371 | 1.81e-21 | 86.7 |
Find 16 sgRNAs with CRISPR-Local
Find 380 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTGATGATGAATTGAAATC+TGG | 0.289460 | 6_1:+78284020 | Msa0893630:CDS |
| ACACGTCGTCTAGCTCTATA+AGG | 0.321269 | 6_1:-78283866 | None:intergenic |
| TTTCAATTTGAAAATCGTTT+CGG | 0.390771 | 6_1:+78283944 | Msa0893630:CDS |
| CTCTATAAGGGTGGCGGAGA+GGG | 0.419218 | 6_1:-78283853 | None:intergenic |
| ACTTCAGGGTTAATTTCCTT+CGG | 0.427168 | 6_1:-78284074 | None:intergenic |
| GGGTGGCGGAGAGGGATGAT+TGG | 0.453980 | 6_1:-78283845 | None:intergenic |
| TCTTGTTAAACGACATCGTA+TGG | 0.487307 | 6_1:+78283986 | Msa0893630:CDS |
| TTGATGATGAATTGAAATCT+GGG | 0.490766 | 6_1:+78284021 | Msa0893630:CDS |
| ATCGTTTCGGAGAAATTCGA+AGG | 0.523092 | 6_1:+78283957 | Msa0893630:CDS |
| GCTTCATGCTCTTTCCATTG+TGG | 0.550728 | 6_1:+78284043 | Msa0893630:CDS |
| CATTGTGGCGAAAACGCCGA+AGG | 0.564619 | 6_1:+78284058 | Msa0893630:CDS |
| CACGTCGTCTAGCTCTATAA+GGG | 0.584411 | 6_1:-78283865 | None:intergenic |
| GTCTAGCTCTATAAGGGTGG+CGG | 0.602686 | 6_1:-78283859 | None:intergenic |
| GCTCTATAAGGGTGGCGGAG+AGG | 0.611742 | 6_1:-78283854 | None:intergenic |
| GGCGCGTGAGAGCAGTGTGG+TGG | 0.631194 | 6_1:-78283802 | None:intergenic |
| GGTGGCGCGTGAGAGCAGTG+TGG | 0.785749 | 6_1:-78283805 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATAAGTTGAAAATAATTTA+TGG | + | chr6_1:78284921-78284940 | Msa0893630:intron | 10.0% |
| !! | GAGATATTTAATTAATATTT+AGG | + | chr6_1:78285177-78285196 | Msa0893630:intron | 10.0% |
| !! | CTTAATTGAAATAAAATTAA+GGG | - | chr6_1:78285410-78285429 | None:intergenic | 10.0% |
| !! | TCTTAATTGAAATAAAATTA+AGG | - | chr6_1:78285411-78285430 | None:intergenic | 10.0% |
| !!! | TAATTTTCTCAAATTATTAT+TGG | + | chr6_1:78287336-78287355 | Msa0893630:intron | 10.0% |
| !!! | AATAAGTTGAAAATAATTTA+TGG | + | chr6_1:78284921-78284940 | Msa0893630:intron | 10.0% |
| !! | GAGATATTTAATTAATATTT+AGG | + | chr6_1:78285177-78285196 | Msa0893630:intron | 10.0% |
| !! | CTTAATTGAAATAAAATTAA+GGG | - | chr6_1:78285410-78285429 | None:intergenic | 10.0% |
| !! | TCTTAATTGAAATAAAATTA+AGG | - | chr6_1:78285411-78285430 | None:intergenic | 10.0% |
| !!! | TAATTTTCTCAAATTATTAT+TGG | + | chr6_1:78287336-78287355 | Msa0893630:intron | 10.0% |
| !! | TTTATTTCAATTAAGATTGT+AGG | + | chr6_1:78285415-78285434 | Msa0893630:intron | 15.0% |
| !! | TTATTTCAATTAAGATTGTA+GGG | + | chr6_1:78285416-78285435 | Msa0893630:intron | 15.0% |
| !!! | AATTTAGTTCCTAAAATTAT+AGG | - | chr6_1:78285929-78285948 | None:intergenic | 15.0% |
| !!! | ATTTTTCATTGTAGTTTTTT+AGG | + | chr6_1:78285961-78285980 | Msa0893630:intron | 15.0% |
| !! | AATTGATTATTTGATTAAGT+TGG | + | chr6_1:78287778-78287797 | Msa0893630:intron | 15.0% |
| !! | TTTATTTCAATTAAGATTGT+AGG | + | chr6_1:78285415-78285434 | Msa0893630:intron | 15.0% |
| !! | TTATTTCAATTAAGATTGTA+GGG | + | chr6_1:78285416-78285435 | Msa0893630:intron | 15.0% |
| !!! | AATTTAGTTCCTAAAATTAT+AGG | - | chr6_1:78285929-78285948 | None:intergenic | 15.0% |
| !!! | ATTTTTCATTGTAGTTTTTT+AGG | + | chr6_1:78285961-78285980 | Msa0893630:intron | 15.0% |
| !! | AATTGATTATTTGATTAAGT+TGG | + | chr6_1:78287778-78287797 | Msa0893630:intron | 15.0% |
| !!! | AACGATTTTCAAATTGAAAT+GGG | - | chr6_1:78283943-78283962 | None:intergenic | 20.0% |
| !!! | AAACGATTTTCAAATTGAAA+TGG | - | chr6_1:78283944-78283963 | None:intergenic | 20.0% |
| !! | TTTCAATTTGAAAATCGTTT+CGG | + | chr6_1:78283944-78283963 | Msa0893630:CDS | 20.0% |
| !! | TTAAGACACTTAATTCAAAA+GGG | - | chr6_1:78284162-78284181 | None:intergenic | 20.0% |
| !! | ATTAAGACACTTAATTCAAA+AGG | - | chr6_1:78284163-78284182 | None:intergenic | 20.0% |
| !! | TAAACACACTTAATTCAAAA+GGG | - | chr6_1:78284225-78284244 | None:intergenic | 20.0% |
| !! | ATAAACACACTTAATTCAAA+AGG | - | chr6_1:78284226-78284245 | None:intergenic | 20.0% |
| !!! | GTCTGTTTTTTTTTTTTGAA+TGG | - | chr6_1:78284436-78284455 | None:intergenic | 20.0% |
| !! | CTTAAGCTGAAAATAATTTA+TGG | + | chr6_1:78284541-78284560 | Msa0893630:intron | 20.0% |
| !!! | AATTTGTTTATGATAGCTTA+GGG | - | chr6_1:78284585-78284604 | None:intergenic | 20.0% |
| !! | TTAGCTTAATAGTTCAAATA+AGG | + | chr6_1:78284678-78284697 | Msa0893630:intron | 20.0% |
| !! | AAGTGTCTTTATTATATAAG+TGG | + | chr6_1:78284795-78284814 | Msa0893630:intron | 20.0% |
| !!! | TATTATTCATTAGCTTGTTA+AGG | - | chr6_1:78285320-78285339 | None:intergenic | 20.0% |
| !! | TATTTCAATTAAGATTGTAG+GGG | + | chr6_1:78285417-78285436 | Msa0893630:intron | 20.0% |
| !!! | TTAATTTTACTAGCTTATAG+CGG | - | chr6_1:78285499-78285518 | None:intergenic | 20.0% |
| !! | AAACAATAAATAAGTCTGTT+TGG | - | chr6_1:78285617-78285636 | None:intergenic | 20.0% |
| !!! | CATTTTGAAATACAATAATG+TGG | - | chr6_1:78285727-78285746 | None:intergenic | 20.0% |
| !!! | GATCAACATTTTACAATATT+AGG | - | chr6_1:78285753-78285772 | None:intergenic | 20.0% |
| !! | AATATTGTAAAATGTTGATC+AGG | + | chr6_1:78285753-78285772 | Msa0893630:intron | 20.0% |
| !! | TGTCATAAATCAAAATATCA+AGG | - | chr6_1:78286004-78286023 | None:intergenic | 20.0% |
| !! | AATTATCATTCTATCCTATT+TGG | - | chr6_1:78286242-78286261 | None:intergenic | 20.0% |
| !!! | TATTTTCTGTTGCAAATTTT+TGG | + | chr6_1:78286340-78286359 | Msa0893630:intron | 20.0% |
| !! | TAATTTATGTAATCATGTGT+TGG | - | chr6_1:78287314-78287333 | None:intergenic | 20.0% |
| !! | TAATCAATTTGAGAACAAAT+TGG | - | chr6_1:78287767-78287786 | None:intergenic | 20.0% |
| !! | TTTGGATTAATATTGTATCA+AGG | + | chr6_1:78287872-78287891 | Msa0893630:intron | 20.0% |
| !!! | AACGATTTTCAAATTGAAAT+GGG | - | chr6_1:78283943-78283962 | None:intergenic | 20.0% |
| !!! | AAACGATTTTCAAATTGAAA+TGG | - | chr6_1:78283944-78283963 | None:intergenic | 20.0% |
| !! | TTTCAATTTGAAAATCGTTT+CGG | + | chr6_1:78283944-78283963 | Msa0893630:CDS | 20.0% |
| !! | TTAAGACACTTAATTCAAAA+GGG | - | chr6_1:78284162-78284181 | None:intergenic | 20.0% |
| !! | ATTAAGACACTTAATTCAAA+AGG | - | chr6_1:78284163-78284182 | None:intergenic | 20.0% |
| !! | TAAACACACTTAATTCAAAA+GGG | - | chr6_1:78284225-78284244 | None:intergenic | 20.0% |
| !! | ATAAACACACTTAATTCAAA+AGG | - | chr6_1:78284226-78284245 | None:intergenic | 20.0% |
| !!! | GTCTGTTTTTTTTTTTTGAA+TGG | - | chr6_1:78284436-78284455 | None:intergenic | 20.0% |
| !! | CTTAAGCTGAAAATAATTTA+TGG | + | chr6_1:78284541-78284560 | Msa0893630:intron | 20.0% |
| !!! | AATTTGTTTATGATAGCTTA+GGG | - | chr6_1:78284585-78284604 | None:intergenic | 20.0% |
| !! | TTAGCTTAATAGTTCAAATA+AGG | + | chr6_1:78284678-78284697 | Msa0893630:intron | 20.0% |
| !! | AAGTGTCTTTATTATATAAG+TGG | + | chr6_1:78284795-78284814 | Msa0893630:intron | 20.0% |
| !!! | TATTATTCATTAGCTTGTTA+AGG | - | chr6_1:78285320-78285339 | None:intergenic | 20.0% |
| !! | TATTTCAATTAAGATTGTAG+GGG | + | chr6_1:78285417-78285436 | Msa0893630:intron | 20.0% |
| !!! | TTAATTTTACTAGCTTATAG+CGG | - | chr6_1:78285499-78285518 | None:intergenic | 20.0% |
| !! | AAACAATAAATAAGTCTGTT+TGG | - | chr6_1:78285617-78285636 | None:intergenic | 20.0% |
| !!! | CATTTTGAAATACAATAATG+TGG | - | chr6_1:78285727-78285746 | None:intergenic | 20.0% |
| !!! | GATCAACATTTTACAATATT+AGG | - | chr6_1:78285753-78285772 | None:intergenic | 20.0% |
| !! | AATATTGTAAAATGTTGATC+AGG | + | chr6_1:78285753-78285772 | Msa0893630:intron | 20.0% |
| !! | TGTCATAAATCAAAATATCA+AGG | - | chr6_1:78286004-78286023 | None:intergenic | 20.0% |
| !! | AATTATCATTCTATCCTATT+TGG | - | chr6_1:78286242-78286261 | None:intergenic | 20.0% |
| !!! | TATTTTCTGTTGCAAATTTT+TGG | + | chr6_1:78286340-78286359 | Msa0893630:intron | 20.0% |
| !! | TAATTTATGTAATCATGTGT+TGG | - | chr6_1:78287314-78287333 | None:intergenic | 20.0% |
| !! | TAATCAATTTGAGAACAAAT+TGG | - | chr6_1:78287767-78287786 | None:intergenic | 20.0% |
| !! | TTTGGATTAATATTGTATCA+AGG | + | chr6_1:78287872-78287891 | Msa0893630:intron | 20.0% |
| !!! | TTGATGATGAATTGAAATCT+GGG | + | chr6_1:78284021-78284040 | Msa0893630:CDS | 25.0% |
| ! | AAAAATAAGCTAACTCAAAC+AGG | - | chr6_1:78284517-78284536 | None:intergenic | 25.0% |
| ! | CTGAAAATAATTTATGGACA+TGG | + | chr6_1:78284547-78284566 | Msa0893630:intron | 25.0% |
| !! | GAATTTGTTTATGATAGCTT+AGG | - | chr6_1:78284586-78284605 | None:intergenic | 25.0% |
| !! | CTAGTAGATTAGTTCAAATA+AGG | + | chr6_1:78284619-78284638 | Msa0893630:intron | 25.0% |
| ! | TAAAGACACTTGATTCAAAA+GGG | - | chr6_1:78284786-78284805 | None:intergenic | 25.0% |
| ! | ATAAAGACACTTGATTCAAA+AGG | - | chr6_1:78284787-78284806 | None:intergenic | 25.0% |
| !! | CTAGTAGATTAGTTCAAATA+AGG | + | chr6_1:78284619-78284638 | Msa0893630:intron | 25.0% |
| !! | TTGAATTTGTTTGTAGTGTT+TGG | + | chr6_1:78285117-78285136 | Msa0893630:intron | 25.0% |
| ! | GTAGTGTTTGGTAAAATTAA+CGG | + | chr6_1:78285129-78285148 | Msa0893630:intron | 25.0% |
| ! | ACAGACTTATTTATTGTTTG+TGG | + | chr6_1:78285618-78285637 | Msa0893630:intron | 25.0% |
| ! | ACAATTTGATGAGCTAAATT+GGG | - | chr6_1:78285682-78285701 | None:intergenic | 25.0% |
| ! | TACAATTTGATGAGCTAAAT+TGG | - | chr6_1:78285683-78285702 | None:intergenic | 25.0% |
| ! | TTGAAATACAATAATGTGGA+GGG | - | chr6_1:78285723-78285742 | None:intergenic | 25.0% |
| !! | TTTGAAATACAATAATGTGG+AGG | - | chr6_1:78285724-78285743 | None:intergenic | 25.0% |
| !!! | ACATGTTGCTTTATTGTTAA+CGG | + | chr6_1:78285882-78285901 | Msa0893630:intron | 25.0% |
| !! | TGATACAGTCCTATAATTTT+AGG | + | chr6_1:78285917-78285936 | Msa0893630:intron | 25.0% |
| ! | ATTTATTTGAACGACCAAAT+AGG | + | chr6_1:78286225-78286244 | Msa0893630:intron | 25.0% |
| ! | TTCCTACTGAAAAATCTAAA+AGG | - | chr6_1:78286518-78286537 | None:intergenic | 25.0% |
| ! | ACTAATCGAAATTCAGAAAT+TGG | - | chr6_1:78286880-78286899 | None:intergenic | 25.0% |
| !! | TTCTTGTTATATGTTGAAGA+AGG | + | chr6_1:78286902-78286921 | Msa0893630:intron | 25.0% |
| ! | ATTAGAAGAAGTAAGGAAAA+TGG | - | chr6_1:78286962-78286981 | None:intergenic | 25.0% |
| ! | ATTATCTGTCATATGTAACT+AGG | + | chr6_1:78287029-78287048 | Msa0893630:intron | 25.0% |
| !! | TTTTACCGCGATAAATATAT+GGG | + | chr6_1:78287130-78287149 | Msa0893630:intron | 25.0% |
| ! | TAGACATGATAACACAAAAA+TGG | + | chr6_1:78287190-78287209 | Msa0893630:intron | 25.0% |
| ! | AACTATCATATTCTCTCTTA+GGG | - | chr6_1:78287673-78287692 | None:intergenic | 25.0% |
| ! | AAACTATCATATTCTCTCTT+AGG | - | chr6_1:78287674-78287693 | None:intergenic | 25.0% |
| !!! | TTGATGATGAATTGAAATCT+GGG | + | chr6_1:78284021-78284040 | Msa0893630:CDS | 25.0% |
| ! | AAAAATAAGCTAACTCAAAC+AGG | - | chr6_1:78284517-78284536 | None:intergenic | 25.0% |
| ! | CTGAAAATAATTTATGGACA+TGG | + | chr6_1:78284547-78284566 | Msa0893630:intron | 25.0% |
| !! | GAATTTGTTTATGATAGCTT+AGG | - | chr6_1:78284586-78284605 | None:intergenic | 25.0% |
| !! | CTAGTAGATTAGTTCAAATA+AGG | + | chr6_1:78284619-78284638 | Msa0893630:intron | 25.0% |
| ! | TAAAGACACTTGATTCAAAA+GGG | - | chr6_1:78284786-78284805 | None:intergenic | 25.0% |
| ! | ATAAAGACACTTGATTCAAA+AGG | - | chr6_1:78284787-78284806 | None:intergenic | 25.0% |
| !! | CTAGTAGATTAGTTCAAATA+AGG | + | chr6_1:78284619-78284638 | Msa0893630:intron | 25.0% |
| !! | TTGAATTTGTTTGTAGTGTT+TGG | + | chr6_1:78285117-78285136 | Msa0893630:intron | 25.0% |
| ! | GTAGTGTTTGGTAAAATTAA+CGG | + | chr6_1:78285129-78285148 | Msa0893630:intron | 25.0% |
| ! | ACAGACTTATTTATTGTTTG+TGG | + | chr6_1:78285618-78285637 | Msa0893630:intron | 25.0% |
| ! | ACAATTTGATGAGCTAAATT+GGG | - | chr6_1:78285682-78285701 | None:intergenic | 25.0% |
| ! | TACAATTTGATGAGCTAAAT+TGG | - | chr6_1:78285683-78285702 | None:intergenic | 25.0% |
| ! | TTGAAATACAATAATGTGGA+GGG | - | chr6_1:78285723-78285742 | None:intergenic | 25.0% |
| !! | TTTGAAATACAATAATGTGG+AGG | - | chr6_1:78285724-78285743 | None:intergenic | 25.0% |
| !!! | ACATGTTGCTTTATTGTTAA+CGG | + | chr6_1:78285882-78285901 | Msa0893630:intron | 25.0% |
| !! | TGATACAGTCCTATAATTTT+AGG | + | chr6_1:78285917-78285936 | Msa0893630:intron | 25.0% |
| ! | ATTTATTTGAACGACCAAAT+AGG | + | chr6_1:78286225-78286244 | Msa0893630:intron | 25.0% |
| ! | TTCCTACTGAAAAATCTAAA+AGG | - | chr6_1:78286518-78286537 | None:intergenic | 25.0% |
| ! | ACTAATCGAAATTCAGAAAT+TGG | - | chr6_1:78286880-78286899 | None:intergenic | 25.0% |
| !! | TTCTTGTTATATGTTGAAGA+AGG | + | chr6_1:78286902-78286921 | Msa0893630:intron | 25.0% |
| ! | ATTAGAAGAAGTAAGGAAAA+TGG | - | chr6_1:78286962-78286981 | None:intergenic | 25.0% |
| ! | ATTATCTGTCATATGTAACT+AGG | + | chr6_1:78287029-78287048 | Msa0893630:intron | 25.0% |
| !! | TTTTACCGCGATAAATATAT+GGG | + | chr6_1:78287130-78287149 | Msa0893630:intron | 25.0% |
| ! | TAGACATGATAACACAAAAA+TGG | + | chr6_1:78287190-78287209 | Msa0893630:intron | 25.0% |
| ! | AACTATCATATTCTCTCTTA+GGG | - | chr6_1:78287673-78287692 | None:intergenic | 25.0% |
| ! | AAACTATCATATTCTCTCTT+AGG | - | chr6_1:78287674-78287693 | None:intergenic | 25.0% |
| !! | CTTGATGATGAATTGAAATC+TGG | + | chr6_1:78284020-78284039 | Msa0893630:CDS | 30.0% |
| AAGTGTGTTTATTGTGTAAG+TGG | + | chr6_1:78284234-78284253 | Msa0893630:intron | 30.0% | |
| ! | TGTTTGGATATATGTTTTCG+TGG | + | chr6_1:78284327-78284346 | Msa0893630:intron | 30.0% |
| !! | AGTTCAAATAAGGCTTTGTT+TGG | + | chr6_1:78284629-78284648 | Msa0893630:intron | 30.0% |
| !! | AGTTCAAATAAGGCTTTGTT+TGG | + | chr6_1:78284629-78284648 | Msa0893630:intron | 30.0% |
| ! | GCTGTTTGTATAAGTTTTTG+TGG | + | chr6_1:78284886-78284905 | Msa0893630:intron | 30.0% |
| ! | AAGTTTTTGTGGAGAGTTTA+TGG | + | chr6_1:78284897-78284916 | Msa0893630:intron | 30.0% |
| !! | AGTTCAAATAAGGCTTTGTT+TGG | + | chr6_1:78284629-78284648 | Msa0893630:intron | 30.0% |
| ! | GATGATAAGTTAGCTTATAG+TGG | + | chr6_1:78285048-78285067 | Msa0893630:intron | 30.0% |
| TTTCATAAGCTCAATCCAAA+CGG | - | chr6_1:78285205-78285224 | None:intergenic | 30.0% | |
| CAAAATAAGCTCAATCCAAA+CGG | + | chr6_1:78285383-78285402 | Msa0893630:intron | 30.0% | |
| AAAATAAGCTCAATCCAAAC+GGG | + | chr6_1:78285384-78285403 | Msa0893630:intron | 30.0% | |
| ATTATAGGACTGTATCAACT+TGG | - | chr6_1:78285914-78285933 | None:intergenic | 30.0% | |
| ACTATGATAAGTTAGTTCCT+CGG | + | chr6_1:78286117-78286136 | Msa0893630:intron | 30.0% | |
| GAGAGATTGAGACTAATTTA+TGG | + | chr6_1:78286164-78286183 | Msa0893630:intron | 30.0% | |
| ATTGAGACTAATTTATGGAG+CGG | + | chr6_1:78286169-78286188 | Msa0893630:intron | 30.0% | |
| TGATTTATGAGTTTGTGCAT+TGG | + | chr6_1:78286293-78286312 | Msa0893630:intron | 30.0% | |
| TGACTTATTGATGAGTTTCT+TGG | + | chr6_1:78286363-78286382 | Msa0893630:intron | 30.0% | |
| !! | ATTGATGATGATGATGTCAT+TGG | + | chr6_1:78286441-78286460 | Msa0893630:intron | 30.0% |
| !! | TGCCTTTTAGATTTTTCAGT+AGG | + | chr6_1:78286513-78286532 | Msa0893630:intron | 30.0% |
| !! | GATTTTTCAGTAGGAATATG+CGG | + | chr6_1:78286522-78286541 | Msa0893630:intron | 30.0% |
| ! | CAAACATGCACTTAATGTTT+TGG | + | chr6_1:78286735-78286754 | Msa0893630:intron | 30.0% |
| ACTCTACAATCTAAACAAAG+TGG | - | chr6_1:78286769-78286788 | None:intergenic | 30.0% | |
| TATAATGTCATGTCTGTTGT+TGG | + | chr6_1:78286790-78286809 | Msa0893630:intron | 30.0% | |
| ! | GTATCTGATTAGTTCATCAT+TGG | - | chr6_1:78286837-78286856 | None:intergenic | 30.0% |
| GAAGTACATTAGAAGAAGTA+AGG | - | chr6_1:78286969-78286988 | None:intergenic | 30.0% | |
| TGACAGATAATGTCAACTAA+GGG | - | chr6_1:78287020-78287039 | None:intergenic | 30.0% | |
| ATGACAGATAATGTCAACTA+AGG | - | chr6_1:78287021-78287040 | None:intergenic | 30.0% | |
| TATGTAACTAGGACAAAACT+TGG | + | chr6_1:78287040-78287059 | Msa0893630:intron | 30.0% | |
| ATGTAACTAGGACAAAACTT+GGG | + | chr6_1:78287041-78287060 | Msa0893630:intron | 30.0% | |
| ATATTTATCGCGGTAAAACT+TGG | - | chr6_1:78287128-78287147 | None:intergenic | 30.0% | |
| ! | GTTTTACCGCGATAAATATA+TGG | + | chr6_1:78287129-78287148 | Msa0893630:intron | 30.0% |
| ! | CAATAGATTAAGGGTTTGTT+TGG | + | chr6_1:78287451-78287470 | Msa0893630:intron | 30.0% |
| !!! | GTTTGCTTCTTTTTTTAACC+AGG | + | chr6_1:78287819-78287838 | Msa0893630:intron | 30.0% |
| CCAAAATAAATCACTTTGAC+CGG | - | chr6_1:78287857-78287876 | None:intergenic | 30.0% | |
| !! | CTTGATGATGAATTGAAATC+TGG | + | chr6_1:78284020-78284039 | Msa0893630:CDS | 30.0% |
| AAGTGTGTTTATTGTGTAAG+TGG | + | chr6_1:78284234-78284253 | Msa0893630:intron | 30.0% | |
| ! | TGTTTGGATATATGTTTTCG+TGG | + | chr6_1:78284327-78284346 | Msa0893630:intron | 30.0% |
| !! | AGTTCAAATAAGGCTTTGTT+TGG | + | chr6_1:78284629-78284648 | Msa0893630:intron | 30.0% |
| !! | AGTTCAAATAAGGCTTTGTT+TGG | + | chr6_1:78284629-78284648 | Msa0893630:intron | 30.0% |
| ! | GCTGTTTGTATAAGTTTTTG+TGG | + | chr6_1:78284886-78284905 | Msa0893630:intron | 30.0% |
| ! | AAGTTTTTGTGGAGAGTTTA+TGG | + | chr6_1:78284897-78284916 | Msa0893630:intron | 30.0% |
| !! | AGTTCAAATAAGGCTTTGTT+TGG | + | chr6_1:78284629-78284648 | Msa0893630:intron | 30.0% |
| ! | GATGATAAGTTAGCTTATAG+TGG | + | chr6_1:78285048-78285067 | Msa0893630:intron | 30.0% |
| TTTCATAAGCTCAATCCAAA+CGG | - | chr6_1:78285205-78285224 | None:intergenic | 30.0% | |
| CAAAATAAGCTCAATCCAAA+CGG | + | chr6_1:78285383-78285402 | Msa0893630:intron | 30.0% | |
| AAAATAAGCTCAATCCAAAC+GGG | + | chr6_1:78285384-78285403 | Msa0893630:intron | 30.0% | |
| ATTATAGGACTGTATCAACT+TGG | - | chr6_1:78285914-78285933 | None:intergenic | 30.0% | |
| ACTATGATAAGTTAGTTCCT+CGG | + | chr6_1:78286117-78286136 | Msa0893630:intron | 30.0% | |
| GAGAGATTGAGACTAATTTA+TGG | + | chr6_1:78286164-78286183 | Msa0893630:intron | 30.0% | |
| ATTGAGACTAATTTATGGAG+CGG | + | chr6_1:78286169-78286188 | Msa0893630:intron | 30.0% | |
| TGATTTATGAGTTTGTGCAT+TGG | + | chr6_1:78286293-78286312 | Msa0893630:intron | 30.0% | |
| TGACTTATTGATGAGTTTCT+TGG | + | chr6_1:78286363-78286382 | Msa0893630:intron | 30.0% | |
| !! | ATTGATGATGATGATGTCAT+TGG | + | chr6_1:78286441-78286460 | Msa0893630:intron | 30.0% |
| !! | TGCCTTTTAGATTTTTCAGT+AGG | + | chr6_1:78286513-78286532 | Msa0893630:intron | 30.0% |
| !! | GATTTTTCAGTAGGAATATG+CGG | + | chr6_1:78286522-78286541 | Msa0893630:intron | 30.0% |
| ! | CAAACATGCACTTAATGTTT+TGG | + | chr6_1:78286735-78286754 | Msa0893630:intron | 30.0% |
| ACTCTACAATCTAAACAAAG+TGG | - | chr6_1:78286769-78286788 | None:intergenic | 30.0% | |
| TATAATGTCATGTCTGTTGT+TGG | + | chr6_1:78286790-78286809 | Msa0893630:intron | 30.0% | |
| ! | GTATCTGATTAGTTCATCAT+TGG | - | chr6_1:78286837-78286856 | None:intergenic | 30.0% |
| GAAGTACATTAGAAGAAGTA+AGG | - | chr6_1:78286969-78286988 | None:intergenic | 30.0% | |
| TGACAGATAATGTCAACTAA+GGG | - | chr6_1:78287020-78287039 | None:intergenic | 30.0% | |
| ATGACAGATAATGTCAACTA+AGG | - | chr6_1:78287021-78287040 | None:intergenic | 30.0% | |
| TATGTAACTAGGACAAAACT+TGG | + | chr6_1:78287040-78287059 | Msa0893630:intron | 30.0% | |
| ATGTAACTAGGACAAAACTT+GGG | + | chr6_1:78287041-78287060 | Msa0893630:intron | 30.0% | |
| ATATTTATCGCGGTAAAACT+TGG | - | chr6_1:78287128-78287147 | None:intergenic | 30.0% | |
| ! | GTTTTACCGCGATAAATATA+TGG | + | chr6_1:78287129-78287148 | Msa0893630:intron | 30.0% |
| ! | CAATAGATTAAGGGTTTGTT+TGG | + | chr6_1:78287451-78287470 | Msa0893630:intron | 30.0% |
| !!! | GTTTGCTTCTTTTTTTAACC+AGG | + | chr6_1:78287819-78287838 | Msa0893630:intron | 30.0% |
| CCAAAATAAATCACTTTGAC+CGG | - | chr6_1:78287857-78287876 | None:intergenic | 30.0% | |
| !!! | TTGGAGTTTTGTTTGGATTC+TGG | - | chr6_1:78283829-78283848 | None:intergenic | 35.0% |
| TCTTGTTAAACGACATCGTA+TGG | + | chr6_1:78283986-78284005 | Msa0893630:CDS | 35.0% | |
| ACTTCAGGGTTAATTTCCTT+CGG | - | chr6_1:78284077-78284096 | None:intergenic | 35.0% | |
| AACCCTGAAGTGAAATGATA+CGG | + | chr6_1:78284086-78284105 | Msa0893630:intron | 35.0% | |
| CATGTAATCTGTAAGCTGTT+TGG | + | chr6_1:78284311-78284330 | Msa0893630:intron | 35.0% | |
| ! | ATGTTTTCGTGGAGAGATTA+TGG | + | chr6_1:78284338-78284357 | Msa0893630:intron | 35.0% |
| AGGCAATAAGTCTGTTTGAT+TGG | - | chr6_1:78284497-78284516 | None:intergenic | 35.0% | |
| ACAAACAGCTTACAGATTAC+AGG | - | chr6_1:78284875-78284894 | None:intergenic | 35.0% | |
| ATTAATATTTAGGCCCCGTT+TGG | + | chr6_1:78285187-78285206 | Msa0893630:intron | 35.0% | |
| TTCATAAGCTCAATCCAAAC+GGG | - | chr6_1:78285204-78285223 | None:intergenic | 35.0% | |
| AATAAAATTAAGGGCCCGTT+TGG | - | chr6_1:78285401-78285420 | None:intergenic | 35.0% | |
| GTTCAGATTTGTACTTCTGT+TGG | - | chr6_1:78285851-78285870 | None:intergenic | 35.0% | |
| !! | TGTTGCTTTATTGTTAACGG+AGG | + | chr6_1:78285885-78285904 | Msa0893630:intron | 35.0% |
| ! | GTTGCTTTATTGTTAACGGA+GGG | + | chr6_1:78285886-78285905 | Msa0893630:intron | 35.0% |
| ! | TTGCTTTATTGTTAACGGAG+GGG | + | chr6_1:78285887-78285906 | Msa0893630:intron | 35.0% |
| TCAAGTTAGACTCTGAACTA+TGG | - | chr6_1:78286146-78286165 | None:intergenic | 35.0% | |
| !!! | GGTTTTAAGCATAGTAGTAC+TGG | + | chr6_1:78286462-78286481 | Msa0893630:intron | 35.0% |
| ATGAGAAGAGCTTCTCATAT+TGG | + | chr6_1:78286488-78286507 | Msa0893630:intron | 35.0% | |
| GAAATGAAACTCATCCTGTT+TGG | - | chr6_1:78286554-78286573 | None:intergenic | 35.0% | |
| !!! | TAGGGATGCTGTTTAGTTTT+TGG | + | chr6_1:78286580-78286599 | Msa0893630:intron | 35.0% |
| !! | TAAGTGCATGTTTGCTTTTG+CGG | - | chr6_1:78286729-78286748 | None:intergenic | 35.0% |
| ! | GGAACGATAGAAAAGTTTTG+TGG | - | chr6_1:78286859-78286878 | None:intergenic | 35.0% |
| CTTCTTCTAATGTACTTCAG+AGG | + | chr6_1:78286971-78286990 | Msa0893630:intron | 35.0% | |
| TGTAACTAGGACAAAACTTG+GGG | + | chr6_1:78287042-78287061 | Msa0893630:intron | 35.0% | |
| CTTGTCCCATATATTTATCG+CGG | - | chr6_1:78287138-78287157 | None:intergenic | 35.0% | |
| TAGAGTGTGATCTATGAAGA+AGG | + | chr6_1:78287230-78287249 | Msa0893630:intron | 35.0% | |
| AGTGTGGTAGATTGTAAGTT+TGG | + | chr6_1:78287386-78287405 | Msa0893630:intron | 35.0% | |
| GTGGAGTGACAATAGATTAA+GGG | + | chr6_1:78287442-78287461 | Msa0893630:intron | 35.0% | |
| AGTGCTAAACAACACTACAA+GGG | - | chr6_1:78287737-78287756 | None:intergenic | 35.0% | |
| TAGTGCTAAACAACACTACA+AGG | - | chr6_1:78287738-78287757 | None:intergenic | 35.0% | |
| AACCAGGTTATTGTAGTAAC+CGG | + | chr6_1:78287835-78287854 | Msa0893630:intron | 35.0% | |
| ! | CCGGTCAAAGTGATTTATTT+TGG | + | chr6_1:78287854-78287873 | Msa0893630:intron | 35.0% |
| !!! | TTGGAGTTTTGTTTGGATTC+TGG | - | chr6_1:78283829-78283848 | None:intergenic | 35.0% |
| TCTTGTTAAACGACATCGTA+TGG | + | chr6_1:78283986-78284005 | Msa0893630:CDS | 35.0% | |
| ACTTCAGGGTTAATTTCCTT+CGG | - | chr6_1:78284077-78284096 | None:intergenic | 35.0% | |
| AACCCTGAAGTGAAATGATA+CGG | + | chr6_1:78284086-78284105 | Msa0893630:intron | 35.0% | |
| CATGTAATCTGTAAGCTGTT+TGG | + | chr6_1:78284311-78284330 | Msa0893630:intron | 35.0% | |
| ! | ATGTTTTCGTGGAGAGATTA+TGG | + | chr6_1:78284338-78284357 | Msa0893630:intron | 35.0% |
| AGGCAATAAGTCTGTTTGAT+TGG | - | chr6_1:78284497-78284516 | None:intergenic | 35.0% | |
| ACAAACAGCTTACAGATTAC+AGG | - | chr6_1:78284875-78284894 | None:intergenic | 35.0% | |
| ATTAATATTTAGGCCCCGTT+TGG | + | chr6_1:78285187-78285206 | Msa0893630:intron | 35.0% | |
| TTCATAAGCTCAATCCAAAC+GGG | - | chr6_1:78285204-78285223 | None:intergenic | 35.0% | |
| AATAAAATTAAGGGCCCGTT+TGG | - | chr6_1:78285401-78285420 | None:intergenic | 35.0% | |
| GTTCAGATTTGTACTTCTGT+TGG | - | chr6_1:78285851-78285870 | None:intergenic | 35.0% | |
| !! | TGTTGCTTTATTGTTAACGG+AGG | + | chr6_1:78285885-78285904 | Msa0893630:intron | 35.0% |
| ! | GTTGCTTTATTGTTAACGGA+GGG | + | chr6_1:78285886-78285905 | Msa0893630:intron | 35.0% |
| ! | TTGCTTTATTGTTAACGGAG+GGG | + | chr6_1:78285887-78285906 | Msa0893630:intron | 35.0% |
| TCAAGTTAGACTCTGAACTA+TGG | - | chr6_1:78286146-78286165 | None:intergenic | 35.0% | |
| !!! | GGTTTTAAGCATAGTAGTAC+TGG | + | chr6_1:78286462-78286481 | Msa0893630:intron | 35.0% |
| ATGAGAAGAGCTTCTCATAT+TGG | + | chr6_1:78286488-78286507 | Msa0893630:intron | 35.0% | |
| GAAATGAAACTCATCCTGTT+TGG | - | chr6_1:78286554-78286573 | None:intergenic | 35.0% | |
| !!! | TAGGGATGCTGTTTAGTTTT+TGG | + | chr6_1:78286580-78286599 | Msa0893630:intron | 35.0% |
| !! | TAAGTGCATGTTTGCTTTTG+CGG | - | chr6_1:78286729-78286748 | None:intergenic | 35.0% |
| ! | GGAACGATAGAAAAGTTTTG+TGG | - | chr6_1:78286859-78286878 | None:intergenic | 35.0% |
| CTTCTTCTAATGTACTTCAG+AGG | + | chr6_1:78286971-78286990 | Msa0893630:intron | 35.0% | |
| TGTAACTAGGACAAAACTTG+GGG | + | chr6_1:78287042-78287061 | Msa0893630:intron | 35.0% | |
| CTTGTCCCATATATTTATCG+CGG | - | chr6_1:78287138-78287157 | None:intergenic | 35.0% | |
| TAGAGTGTGATCTATGAAGA+AGG | + | chr6_1:78287230-78287249 | Msa0893630:intron | 35.0% | |
| AGTGTGGTAGATTGTAAGTT+TGG | + | chr6_1:78287386-78287405 | Msa0893630:intron | 35.0% | |
| GTGGAGTGACAATAGATTAA+GGG | + | chr6_1:78287442-78287461 | Msa0893630:intron | 35.0% | |
| AGTGCTAAACAACACTACAA+GGG | - | chr6_1:78287737-78287756 | None:intergenic | 35.0% | |
| TAGTGCTAAACAACACTACA+AGG | - | chr6_1:78287738-78287757 | None:intergenic | 35.0% | |
| AACCAGGTTATTGTAGTAAC+CGG | + | chr6_1:78287835-78287854 | Msa0893630:intron | 35.0% | |
| ! | CCGGTCAAAGTGATTTATTT+TGG | + | chr6_1:78287854-78287873 | Msa0893630:intron | 35.0% |
| !!! | GAGTTTTGTTTGGATTCTGG+TGG | - | chr6_1:78283826-78283845 | None:intergenic | 40.0% |
| !!! | GGGATGATTGGAGTTTTGTT+TGG | - | chr6_1:78283836-78283855 | None:intergenic | 40.0% |
| ATCGTTTCGGAGAAATTCGA+AGG | + | chr6_1:78283957-78283976 | Msa0893630:CDS | 40.0% | |
| CACCGTATCATTTCACTTCA+GGG | - | chr6_1:78284091-78284110 | None:intergenic | 40.0% | |
| ! | TGAAATGATACGGTGCGTTT+TGG | + | chr6_1:78284096-78284115 | Msa0893630:intron | 40.0% |
| TCATAAGCTCAATCCAAACG+GGG | - | chr6_1:78285203-78285222 | None:intergenic | 40.0% | |
| ! | GCTTTAAGTTCGTGAGAATG+TGG | + | chr6_1:78285519-78285538 | Msa0893630:intron | 40.0% |
| TTAAGTTCGTGAGAATGTGG+CGG | + | chr6_1:78285522-78285541 | Msa0893630:intron | 40.0% | |
| CGGAGACTATAATGACATTG+AGG | - | chr6_1:78285822-78285841 | None:intergenic | 40.0% | |
| TGTACTTCTGTTGGCAATTG+CGG | - | chr6_1:78285842-78285861 | None:intergenic | 40.0% | |
| ATGAAACTCATCCTGTTTGG+AGG | - | chr6_1:78286551-78286570 | None:intergenic | 40.0% | |
| ACAGGATGAGTTTCATTTCC+TGG | + | chr6_1:78286555-78286574 | Msa0893630:intron | 40.0% | |
| CAGGATGAGTTTCATTTCCT+GGG | + | chr6_1:78286556-78286575 | Msa0893630:intron | 40.0% | |
| ! | TCTGTTGTTGGTATTGAGTC+TGG | + | chr6_1:78286802-78286821 | Msa0893630:intron | 40.0% |
| ! | TGTTGAAGAAGGTAGTTCTG+AGG | + | chr6_1:78286913-78286932 | Msa0893630:intron | 40.0% |
| TGTCTGTGCTTCATATAGTG+TGG | + | chr6_1:78287370-78287389 | Msa0893630:intron | 40.0% | |
| GGTGGAGTGACAATAGATTA+AGG | + | chr6_1:78287441-78287460 | Msa0893630:intron | 40.0% | |
| ATATCCCGACTCTCTTATCT+TGG | + | chr6_1:78287699-78287718 | Msa0893630:intron | 40.0% | |
| !!! | GAGTTTTGTTTGGATTCTGG+TGG | - | chr6_1:78283826-78283845 | None:intergenic | 40.0% |
| !!! | GGGATGATTGGAGTTTTGTT+TGG | - | chr6_1:78283836-78283855 | None:intergenic | 40.0% |
| ATCGTTTCGGAGAAATTCGA+AGG | + | chr6_1:78283957-78283976 | Msa0893630:CDS | 40.0% | |
| CACCGTATCATTTCACTTCA+GGG | - | chr6_1:78284091-78284110 | None:intergenic | 40.0% | |
| ! | TGAAATGATACGGTGCGTTT+TGG | + | chr6_1:78284096-78284115 | Msa0893630:intron | 40.0% |
| TCATAAGCTCAATCCAAACG+GGG | - | chr6_1:78285203-78285222 | None:intergenic | 40.0% | |
| ! | GCTTTAAGTTCGTGAGAATG+TGG | + | chr6_1:78285519-78285538 | Msa0893630:intron | 40.0% |
| TTAAGTTCGTGAGAATGTGG+CGG | + | chr6_1:78285522-78285541 | Msa0893630:intron | 40.0% | |
| CGGAGACTATAATGACATTG+AGG | - | chr6_1:78285822-78285841 | None:intergenic | 40.0% | |
| TGTACTTCTGTTGGCAATTG+CGG | - | chr6_1:78285842-78285861 | None:intergenic | 40.0% | |
| ATGAAACTCATCCTGTTTGG+AGG | - | chr6_1:78286551-78286570 | None:intergenic | 40.0% | |
| ACAGGATGAGTTTCATTTCC+TGG | + | chr6_1:78286555-78286574 | Msa0893630:intron | 40.0% | |
| CAGGATGAGTTTCATTTCCT+GGG | + | chr6_1:78286556-78286575 | Msa0893630:intron | 40.0% | |
| ! | TCTGTTGTTGGTATTGAGTC+TGG | + | chr6_1:78286802-78286821 | Msa0893630:intron | 40.0% |
| ! | TGTTGAAGAAGGTAGTTCTG+AGG | + | chr6_1:78286913-78286932 | Msa0893630:intron | 40.0% |
| TGTCTGTGCTTCATATAGTG+TGG | + | chr6_1:78287370-78287389 | Msa0893630:intron | 40.0% | |
| GGTGGAGTGACAATAGATTA+AGG | + | chr6_1:78287441-78287460 | Msa0893630:intron | 40.0% | |
| ATATCCCGACTCTCTTATCT+TGG | + | chr6_1:78287699-78287718 | Msa0893630:intron | 40.0% | |
| !! | CACGTCGTCTAGCTCTATAA+GGG | - | chr6_1:78283868-78283887 | None:intergenic | 45.0% |
| !! | ACACGTCGTCTAGCTCTATA+AGG | - | chr6_1:78283869-78283888 | None:intergenic | 45.0% |
| GCTTCATGCTCTTTCCATTG+TGG | + | chr6_1:78284043-78284062 | Msa0893630:CDS | 45.0% | |
| GCACCGTATCATTTCACTTC+AGG | - | chr6_1:78284092-78284111 | None:intergenic | 45.0% | |
| CTCTCCTAAACAGACTCACA+AGG | + | chr6_1:78284410-78284429 | Msa0893630:intron | 45.0% | |
| !! | ATGGCCTTGTGAGTCTGTTT+AGG | - | chr6_1:78284417-78284436 | None:intergenic | 45.0% |
| TGTGGAGGGCTAAGTTCATA+AGG | - | chr6_1:78285709-78285728 | None:intergenic | 45.0% | |
| TGAGTTTCATTTCCTGGGCT+AGG | + | chr6_1:78286561-78286580 | Msa0893630:intron | 45.0% | |
| GAGTTTCATTTCCTGGGCTA+GGG | + | chr6_1:78286562-78286581 | Msa0893630:intron | 45.0% | |
| CTTCTGAGTTCACTTTGCCT+CGG | + | chr6_1:78286681-78286700 | Msa0893630:intron | 45.0% | |
| TTCTGAGTTCACTTTGCCTC+GGG | + | chr6_1:78286682-78286701 | Msa0893630:intron | 45.0% | |
| !! | TCTATGAAGAAGGTACTCCC+CGG | + | chr6_1:78287240-78287259 | Msa0893630:intron | 45.0% |
| ATTCTCTCTTAGGGCTCGTT+TGG | - | chr6_1:78287664-78287683 | None:intergenic | 45.0% | |
| GTGACCAAGATAAGAGAGTC+GGG | - | chr6_1:78287706-78287725 | None:intergenic | 45.0% | |
| CGTGACCAAGATAAGAGAGT+CGG | - | chr6_1:78287707-78287726 | None:intergenic | 45.0% | |
| GACCGGTTACTACAATAACC+TGG | - | chr6_1:78287840-78287859 | None:intergenic | 45.0% | |
| !! | CACGTCGTCTAGCTCTATAA+GGG | - | chr6_1:78283868-78283887 | None:intergenic | 45.0% |
| !! | ACACGTCGTCTAGCTCTATA+AGG | - | chr6_1:78283869-78283888 | None:intergenic | 45.0% |
| GCTTCATGCTCTTTCCATTG+TGG | + | chr6_1:78284043-78284062 | Msa0893630:CDS | 45.0% | |
| GCACCGTATCATTTCACTTC+AGG | - | chr6_1:78284092-78284111 | None:intergenic | 45.0% | |
| CTCTCCTAAACAGACTCACA+AGG | + | chr6_1:78284410-78284429 | Msa0893630:intron | 45.0% | |
| !! | ATGGCCTTGTGAGTCTGTTT+AGG | - | chr6_1:78284417-78284436 | None:intergenic | 45.0% |
| TGTGGAGGGCTAAGTTCATA+AGG | - | chr6_1:78285709-78285728 | None:intergenic | 45.0% | |
| TGAGTTTCATTTCCTGGGCT+AGG | + | chr6_1:78286561-78286580 | Msa0893630:intron | 45.0% | |
| GAGTTTCATTTCCTGGGCTA+GGG | + | chr6_1:78286562-78286581 | Msa0893630:intron | 45.0% | |
| CTTCTGAGTTCACTTTGCCT+CGG | + | chr6_1:78286681-78286700 | Msa0893630:intron | 45.0% | |
| TTCTGAGTTCACTTTGCCTC+GGG | + | chr6_1:78286682-78286701 | Msa0893630:intron | 45.0% | |
| !! | TCTATGAAGAAGGTACTCCC+CGG | + | chr6_1:78287240-78287259 | Msa0893630:intron | 45.0% |
| ATTCTCTCTTAGGGCTCGTT+TGG | - | chr6_1:78287664-78287683 | None:intergenic | 45.0% | |
| GTGACCAAGATAAGAGAGTC+GGG | - | chr6_1:78287706-78287725 | None:intergenic | 45.0% | |
| CGTGACCAAGATAAGAGAGT+CGG | - | chr6_1:78287707-78287726 | None:intergenic | 45.0% | |
| GACCGGTTACTACAATAACC+TGG | - | chr6_1:78287840-78287859 | None:intergenic | 45.0% | |
| !! | GTCTAGCTCTATAAGGGTGG+CGG | - | chr6_1:78283862-78283881 | None:intergenic | 50.0% |
| !! | GTCGTCTAGCTCTATAAGGG+TGG | - | chr6_1:78283865-78283884 | None:intergenic | 50.0% |
| ACTCTGAACTATGGCTACCG+AGG | - | chr6_1:78286137-78286156 | None:intergenic | 50.0% | |
| ATATGCGGCTTCCTCCAAAC+AGG | + | chr6_1:78286537-78286556 | Msa0893630:intron | 50.0% | |
| !! | CTATGAAGAAGGTACTCCCC+GGG | + | chr6_1:78287241-78287260 | Msa0893630:intron | 50.0% |
| ACATATCCGACACCGTAACC+CGG | - | chr6_1:78287262-78287281 | None:intergenic | 50.0% | |
| CGACTCCACACTAGAAACGT+TGG | + | chr6_1:78287420-78287439 | Msa0893630:intron | 50.0% | |
| CTCCACACTAGAAACGTTGG+TGG | + | chr6_1:78287423-78287442 | Msa0893630:intron | 50.0% | |
| !! | CTCCACCAACGTTTCTAGTG+TGG | - | chr6_1:78287428-78287447 | None:intergenic | 50.0% |
| !! | GTCTAGCTCTATAAGGGTGG+CGG | - | chr6_1:78283862-78283881 | None:intergenic | 50.0% |
| !! | GTCGTCTAGCTCTATAAGGG+TGG | - | chr6_1:78283865-78283884 | None:intergenic | 50.0% |
| ACTCTGAACTATGGCTACCG+AGG | - | chr6_1:78286137-78286156 | None:intergenic | 50.0% | |
| ATATGCGGCTTCCTCCAAAC+AGG | + | chr6_1:78286537-78286556 | Msa0893630:intron | 50.0% | |
| !! | CTATGAAGAAGGTACTCCCC+GGG | + | chr6_1:78287241-78287260 | Msa0893630:intron | 50.0% |
| ACATATCCGACACCGTAACC+CGG | - | chr6_1:78287262-78287281 | None:intergenic | 50.0% | |
| CGACTCCACACTAGAAACGT+TGG | + | chr6_1:78287420-78287439 | Msa0893630:intron | 50.0% | |
| CTCCACACTAGAAACGTTGG+TGG | + | chr6_1:78287423-78287442 | Msa0893630:intron | 50.0% | |
| !! | CTCCACCAACGTTTCTAGTG+TGG | - | chr6_1:78287428-78287447 | None:intergenic | 50.0% |
| !! | CTCTATAAGGGTGGCGGAGA+GGG | - | chr6_1:78283856-78283875 | None:intergenic | 55.0% |
| GACGTGTCGTATCAACACGC+AGG | + | chr6_1:78283882-78283901 | Msa0893630:intron | 55.0% | |
| ! | CTTCGGCGTTTTCGCCACAA+TGG | - | chr6_1:78284060-78284079 | None:intergenic | 55.0% |
| CATTGTGGCGAAAACGCCGA+AGG | + | chr6_1:78284058-78284077 | Msa0893630:CDS | 55.0% | |
| AGAATGTGGCGGTTGCGAAG+CGG | + | chr6_1:78285533-78285552 | Msa0893630:intron | 55.0% | |
| CTAAACAGCATCCCTAGCCC+AGG | - | chr6_1:78286576-78286595 | None:intergenic | 55.0% | |
| !! | AGAAGGTACTCCCCGGGTTA+CGG | + | chr6_1:78287247-78287266 | Msa0893630:intron | 55.0% |
| ATATCCGACACCGTAACCCG+GGG | - | chr6_1:78287260-78287279 | None:intergenic | 55.0% | |
| CATATCCGACACCGTAACCC+GGG | - | chr6_1:78287261-78287280 | None:intergenic | 55.0% | |
| !! | GTGTTGGTGTCGTGTCGTGT+CGG | - | chr6_1:78287298-78287317 | None:intergenic | 55.0% |
| !! | CTCTATAAGGGTGGCGGAGA+GGG | - | chr6_1:78283856-78283875 | None:intergenic | 55.0% |
| GACGTGTCGTATCAACACGC+AGG | + | chr6_1:78283882-78283901 | Msa0893630:intron | 55.0% | |
| ! | CTTCGGCGTTTTCGCCACAA+TGG | - | chr6_1:78284060-78284079 | None:intergenic | 55.0% |
| CATTGTGGCGAAAACGCCGA+AGG | + | chr6_1:78284058-78284077 | Msa0893630:CDS | 55.0% | |
| AGAATGTGGCGGTTGCGAAG+CGG | + | chr6_1:78285533-78285552 | Msa0893630:intron | 55.0% | |
| CTAAACAGCATCCCTAGCCC+AGG | - | chr6_1:78286576-78286595 | None:intergenic | 55.0% | |
| !! | AGAAGGTACTCCCCGGGTTA+CGG | + | chr6_1:78287247-78287266 | Msa0893630:intron | 55.0% |
| ATATCCGACACCGTAACCCG+GGG | - | chr6_1:78287260-78287279 | None:intergenic | 55.0% | |
| CATATCCGACACCGTAACCC+GGG | - | chr6_1:78287261-78287280 | None:intergenic | 55.0% | |
| !! | GTGTTGGTGTCGTGTCGTGT+CGG | - | chr6_1:78287298-78287317 | None:intergenic | 55.0% |
| !! | GCTCTATAAGGGTGGCGGAG+AGG | - | chr6_1:78283857-78283876 | None:intergenic | 60.0% |
| GAATGTGGCGGTTGCGAAGC+GGG | + | chr6_1:78285534-78285553 | Msa0893630:intron | 60.0% | |
| TGTTGTGTTCTCGCGTCCCG+AGG | - | chr6_1:78286701-78286720 | None:intergenic | 60.0% | |
| TACTCCCCGGGTTACGGTGT+CGG | + | chr6_1:78287253-78287272 | Msa0893630:intron | 60.0% | |
| ! | GTGTCGTGTCGTGTCGGTGT+TGG | - | chr6_1:78287292-78287311 | None:intergenic | 60.0% |
| !! | GCTCTATAAGGGTGGCGGAG+AGG | - | chr6_1:78283857-78283876 | None:intergenic | 60.0% |
| GAATGTGGCGGTTGCGAAGC+GGG | + | chr6_1:78285534-78285553 | Msa0893630:intron | 60.0% | |
| TGTTGTGTTCTCGCGTCCCG+AGG | - | chr6_1:78286701-78286720 | None:intergenic | 60.0% | |
| TACTCCCCGGGTTACGGTGT+CGG | + | chr6_1:78287253-78287272 | Msa0893630:intron | 60.0% | |
| ! | GTGTCGTGTCGTGTCGGTGT+TGG | - | chr6_1:78287292-78287311 | None:intergenic | 60.0% |
| !! | GGGTGGCGGAGAGGGATGAT+TGG | - | chr6_1:78283848-78283867 | None:intergenic | 65.0% |
| !! | GGGTGGCGGAGAGGGATGAT+TGG | - | chr6_1:78283848-78283867 | None:intergenic | 65.0% |
| GGCGCGTGAGAGCAGTGTGG+TGG | - | chr6_1:78283805-78283824 | None:intergenic | 70.0% | |
| GGTGGCGCGTGAGAGCAGTG+TGG | - | chr6_1:78283808-78283827 | None:intergenic | 70.0% | |
| GGCGCGTGAGAGCAGTGTGG+TGG | - | chr6_1:78283805-78283824 | None:intergenic | 70.0% | |
| GGTGGCGCGTGAGAGCAGTG+TGG | - | chr6_1:78283808-78283827 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_1 | gene | 78283800 | 78287902 | 78283800 | ID=Msa0893630;Name=Msa0893630 |
| chr6_1 | mRNA | 78283800 | 78287902 | 78283800 | ID=Msa0893630-mRNA-1;Parent=Msa0893630;Name=Msa0893630-mRNA-1;_AED=0.31;_eAED=0.51;_QI=0|0|0|1|0|0|4|0|97 |
| chr6_1 | exon | 78283800 | 78283884 | 78283800 | ID=Msa0893630-mRNA-1:exon:13048;Parent=Msa0893630-mRNA-1 |
| chr6_1 | exon | 78283904 | 78284094 | 78283904 | ID=Msa0893630-mRNA-1:exon:13049;Parent=Msa0893630-mRNA-1 |
| chr6_1 | exon | 78287841 | 78287846 | 78287841 | ID=Msa0893630-mRNA-1:exon:13050;Parent=Msa0893630-mRNA-1 |
| chr6_1 | exon | 78287894 | 78287902 | 78287894 | ID=Msa0893630-mRNA-1:exon:13051;Parent=Msa0893630-mRNA-1 |
| chr6_1 | CDS | 78283800 | 78283884 | 78283800 | ID=Msa0893630-mRNA-1:cds;Parent=Msa0893630-mRNA-1 |
| chr6_1 | CDS | 78283904 | 78284094 | 78283904 | ID=Msa0893630-mRNA-1:cds;Parent=Msa0893630-mRNA-1 |
| chr6_1 | CDS | 78287841 | 78287846 | 78287841 | ID=Msa0893630-mRNA-1:cds;Parent=Msa0893630-mRNA-1 |
| chr6_1 | CDS | 78287894 | 78287902 | 78287894 | ID=Msa0893630-mRNA-1:cds;Parent=Msa0893630-mRNA-1 |
| Gene Sequence |
| Protein sequence |
