Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0893690 | AES76469.1 | 74.713 | 87 | 22 | 0 | 7 | 93 | 18 | 104 | 5.97e-37 | 130 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0893690 | sp|Q682I1|BOLA1_ARATH | 67.797 | 59 | 19 | 0 | 30 | 88 | 97 | 155 | 2.71e-22 | 87.8 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0893690 | G7KL80 | 74.713 | 87 | 22 | 0 | 7 | 93 | 18 | 104 | 2.85e-37 | 130 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0053010 | Msa0893690 | -0.816561 | 5.189215e-52 | -8.615850e-47 |
| Msa0805960 | Msa0893690 | -0.845098 | 5.018358e-59 | -8.615850e-47 |
| Msa0140500 | Msa0893690 | 0.802502 | 5.442174e-49 | -8.615850e-47 |
| Msa0306210 | Msa0893690 | 0.810586 | 1.070594e-50 | -8.615850e-47 |
| Msa0307310 | Msa0893690 | -0.805481 | 1.307672e-49 | -8.615850e-47 |
| Msa0893630 | Msa0893690 | 0.813422 | 2.580997e-51 | -8.615850e-47 |
| Msa0893690 | Msa1133390 | 0.838700 | 2.460791e-57 | -8.615850e-47 |
| Msa0893690 | Msa1325860 | 0.814138 | 1.794491e-51 | -8.615850e-47 |
| Msa0893690 | Msa1445390 | 0.802882 | 4.542395e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0893690 | MtrunA17_Chr6g0481551 | 74.713 | 87 | 22 | 0 | 7 | 93 | 18 | 104 | 5.49e-41 | 130 |
| Msa0893690 | MtrunA17_Chr1g0170001 | 63.333 | 60 | 21 | 1 | 30 | 89 | 292 | 350 | 6.95e-20 | 82.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0893690 | AT1G55805.1 | 67.797 | 59 | 19 | 0 | 30 | 88 | 97 | 155 | 2.75e-23 | 87.8 |
| Msa0893690 | AT4G26500.1 | 66.129 | 62 | 19 | 1 | 30 | 89 | 310 | 371 | 1.81e-21 | 86.7 |
Find 16 sgRNAs with CRISPR-Local
Find 380 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTGATGATGAATTGAAATC+TGG | 0.289460 | 6_1:-78458813 | Msa0893690:CDS |
| ACACGTCGTCTAGCTCTATA+AGG | 0.321269 | 6_1:+78458967 | None:intergenic |
| TTTCAATTTGAAAATCGTTT+CGG | 0.390771 | 6_1:-78458889 | Msa0893690:CDS |
| CTCTATAAGGGTGGCGGAGA+GGG | 0.419218 | 6_1:+78458980 | None:intergenic |
| ACTTCAGGGTTAATTTCCTT+CGG | 0.427168 | 6_1:+78458759 | None:intergenic |
| GGGTGGCGGAGAGGGATGAT+TGG | 0.453980 | 6_1:+78458988 | None:intergenic |
| TCTTGTTAAACGACATCGTA+TGG | 0.487307 | 6_1:-78458847 | Msa0893690:CDS |
| TTGATGATGAATTGAAATCT+GGG | 0.490766 | 6_1:-78458812 | Msa0893690:CDS |
| ATCGTTTCGGAGAAATTCGA+AGG | 0.523092 | 6_1:-78458876 | Msa0893690:CDS |
| GCTTCATGCTCTTTCCATTG+TGG | 0.550728 | 6_1:-78458790 | Msa0893690:CDS |
| CATTGTGGCGAAAACGCCGA+AGG | 0.564619 | 6_1:-78458775 | Msa0893690:CDS |
| CACGTCGTCTAGCTCTATAA+GGG | 0.584411 | 6_1:+78458968 | None:intergenic |
| GTCTAGCTCTATAAGGGTGG+CGG | 0.602686 | 6_1:+78458974 | None:intergenic |
| GCTCTATAAGGGTGGCGGAG+AGG | 0.611742 | 6_1:+78458979 | None:intergenic |
| GGCGCGTGAGAGCAGTGTGG+TGG | 0.631194 | 6_1:+78459031 | None:intergenic |
| GGTGGCGCGTGAGAGCAGTG+TGG | 0.785749 | 6_1:+78459028 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATAAGTTGAAAATAATTTA+TGG | - | chr6_1:78456074-78456093 | Msa0893690:intron | 10.0% |
| !! | GAGATATTTAATTAATATTT+AGG | - | chr6_1:78456330-78456349 | Msa0893690:intron | 10.0% |
| !! | CTTAATTGAAATAAAATTAA+GGG | + | chr6_1:78456563-78456582 | None:intergenic | 10.0% |
| !! | TCTTAATTGAAATAAAATTA+AGG | + | chr6_1:78456564-78456583 | None:intergenic | 10.0% |
| !!! | TAATTTTCTCAAATTATTAT+TGG | - | chr6_1:78458489-78458508 | Msa0893690:intron | 10.0% |
| !!! | AATAAGTTGAAAATAATTTA+TGG | - | chr6_1:78456074-78456093 | Msa0893690:intron | 10.0% |
| !! | GAGATATTTAATTAATATTT+AGG | - | chr6_1:78456330-78456349 | Msa0893690:intron | 10.0% |
| !! | CTTAATTGAAATAAAATTAA+GGG | + | chr6_1:78456563-78456582 | None:intergenic | 10.0% |
| !! | TCTTAATTGAAATAAAATTA+AGG | + | chr6_1:78456564-78456583 | None:intergenic | 10.0% |
| !!! | TAATTTTCTCAAATTATTAT+TGG | - | chr6_1:78458489-78458508 | Msa0893690:intron | 10.0% |
| !! | TTTATTTCAATTAAGATTGT+AGG | - | chr6_1:78456568-78456587 | Msa0893690:intron | 15.0% |
| !! | TTATTTCAATTAAGATTGTA+GGG | - | chr6_1:78456569-78456588 | Msa0893690:intron | 15.0% |
| !!! | AATTTAGTTCCTAAAATTAT+AGG | + | chr6_1:78457082-78457101 | None:intergenic | 15.0% |
| !!! | ATTTTTCATTGTAGTTTTTT+AGG | - | chr6_1:78457114-78457133 | Msa0893690:intron | 15.0% |
| !! | AATTGATTATTTGATTAAGT+TGG | - | chr6_1:78458931-78458950 | Msa0893690:CDS | 15.0% |
| !! | TTTATTTCAATTAAGATTGT+AGG | - | chr6_1:78456568-78456587 | Msa0893690:intron | 15.0% |
| !! | TTATTTCAATTAAGATTGTA+GGG | - | chr6_1:78456569-78456588 | Msa0893690:intron | 15.0% |
| !!! | AATTTAGTTCCTAAAATTAT+AGG | + | chr6_1:78457082-78457101 | None:intergenic | 15.0% |
| !!! | ATTTTTCATTGTAGTTTTTT+AGG | - | chr6_1:78457114-78457133 | Msa0893690:intron | 15.0% |
| !! | AATTGATTATTTGATTAAGT+TGG | - | chr6_1:78458931-78458950 | Msa0893690:CDS | 15.0% |
| !!! | AACGATTTTCAAATTGAAAT+GGG | + | chr6_1:78455097-78455116 | None:intergenic | 20.0% |
| !!! | AAACGATTTTCAAATTGAAA+TGG | + | chr6_1:78455098-78455117 | None:intergenic | 20.0% |
| !! | TTTCAATTTGAAAATCGTTT+CGG | - | chr6_1:78455098-78455117 | Msa0893690:intron | 20.0% |
| !! | TTAAGACACTTAATTCAAAA+GGG | + | chr6_1:78455316-78455335 | None:intergenic | 20.0% |
| !! | ATTAAGACACTTAATTCAAA+AGG | + | chr6_1:78455317-78455336 | None:intergenic | 20.0% |
| !! | TAAACACACTTAATTCAAAA+GGG | + | chr6_1:78455379-78455398 | None:intergenic | 20.0% |
| !! | ATAAACACACTTAATTCAAA+AGG | + | chr6_1:78455380-78455399 | None:intergenic | 20.0% |
| !!! | GTCTGTTTTTTTTTTTTGAA+TGG | + | chr6_1:78455590-78455609 | None:intergenic | 20.0% |
| !! | CTTAAGCTGAAAATAATTTA+TGG | - | chr6_1:78455695-78455714 | Msa0893690:intron | 20.0% |
| !!! | AATTTGTTTATGATAGCTTA+GGG | + | chr6_1:78455739-78455758 | None:intergenic | 20.0% |
| !! | TTAGCTTAATAGTTCAAATA+AGG | - | chr6_1:78455832-78455851 | Msa0893690:intron | 20.0% |
| !! | AAGTGTCTTTATTATATAAG+TGG | - | chr6_1:78455948-78455967 | Msa0893690:intron | 20.0% |
| !!! | TATTATTCATTAGCTTGTTA+AGG | + | chr6_1:78456473-78456492 | None:intergenic | 20.0% |
| !! | TATTTCAATTAAGATTGTAG+GGG | - | chr6_1:78456570-78456589 | Msa0893690:intron | 20.0% |
| !!! | TTAATTTTACTAGCTTATAG+CGG | + | chr6_1:78456652-78456671 | None:intergenic | 20.0% |
| !! | AAACAATAAATAAGTCTGTT+TGG | + | chr6_1:78456770-78456789 | None:intergenic | 20.0% |
| !!! | CATTTTGAAATACAATAATG+TGG | + | chr6_1:78456880-78456899 | None:intergenic | 20.0% |
| !!! | GATCAACATTTTACAATATT+AGG | + | chr6_1:78456906-78456925 | None:intergenic | 20.0% |
| !! | AATATTGTAAAATGTTGATC+AGG | - | chr6_1:78456906-78456925 | Msa0893690:intron | 20.0% |
| !! | TGTCATAAATCAAAATATCA+AGG | + | chr6_1:78457157-78457176 | None:intergenic | 20.0% |
| !! | AATTATCATTCTATCCTATT+TGG | + | chr6_1:78457395-78457414 | None:intergenic | 20.0% |
| !!! | TATTTTCTGTTGCAAATTTT+TGG | - | chr6_1:78457493-78457512 | Msa0893690:intron | 20.0% |
| !! | TAATTTATGTAATCATGTGT+TGG | + | chr6_1:78458467-78458486 | None:intergenic | 20.0% |
| !! | TAATCAATTTGAGAACAAAT+TGG | + | chr6_1:78458920-78458939 | None:intergenic | 20.0% |
| !! | TTTGGATTAATATTGTATCA+AGG | - | chr6_1:78459025-78459044 | Msa0893690:CDS | 20.0% |
| !!! | AACGATTTTCAAATTGAAAT+GGG | + | chr6_1:78455097-78455116 | None:intergenic | 20.0% |
| !!! | AAACGATTTTCAAATTGAAA+TGG | + | chr6_1:78455098-78455117 | None:intergenic | 20.0% |
| !! | TTTCAATTTGAAAATCGTTT+CGG | - | chr6_1:78455098-78455117 | Msa0893690:intron | 20.0% |
| !! | TTAAGACACTTAATTCAAAA+GGG | + | chr6_1:78455316-78455335 | None:intergenic | 20.0% |
| !! | ATTAAGACACTTAATTCAAA+AGG | + | chr6_1:78455317-78455336 | None:intergenic | 20.0% |
| !! | TAAACACACTTAATTCAAAA+GGG | + | chr6_1:78455379-78455398 | None:intergenic | 20.0% |
| !! | ATAAACACACTTAATTCAAA+AGG | + | chr6_1:78455380-78455399 | None:intergenic | 20.0% |
| !!! | GTCTGTTTTTTTTTTTTGAA+TGG | + | chr6_1:78455590-78455609 | None:intergenic | 20.0% |
| !! | CTTAAGCTGAAAATAATTTA+TGG | - | chr6_1:78455695-78455714 | Msa0893690:intron | 20.0% |
| !!! | AATTTGTTTATGATAGCTTA+GGG | + | chr6_1:78455739-78455758 | None:intergenic | 20.0% |
| !! | TTAGCTTAATAGTTCAAATA+AGG | - | chr6_1:78455832-78455851 | Msa0893690:intron | 20.0% |
| !! | AAGTGTCTTTATTATATAAG+TGG | - | chr6_1:78455948-78455967 | Msa0893690:intron | 20.0% |
| !!! | TATTATTCATTAGCTTGTTA+AGG | + | chr6_1:78456473-78456492 | None:intergenic | 20.0% |
| !! | TATTTCAATTAAGATTGTAG+GGG | - | chr6_1:78456570-78456589 | Msa0893690:intron | 20.0% |
| !!! | TTAATTTTACTAGCTTATAG+CGG | + | chr6_1:78456652-78456671 | None:intergenic | 20.0% |
| !! | AAACAATAAATAAGTCTGTT+TGG | + | chr6_1:78456770-78456789 | None:intergenic | 20.0% |
| !!! | CATTTTGAAATACAATAATG+TGG | + | chr6_1:78456880-78456899 | None:intergenic | 20.0% |
| !!! | GATCAACATTTTACAATATT+AGG | + | chr6_1:78456906-78456925 | None:intergenic | 20.0% |
| !! | AATATTGTAAAATGTTGATC+AGG | - | chr6_1:78456906-78456925 | Msa0893690:intron | 20.0% |
| !! | TGTCATAAATCAAAATATCA+AGG | + | chr6_1:78457157-78457176 | None:intergenic | 20.0% |
| !! | AATTATCATTCTATCCTATT+TGG | + | chr6_1:78457395-78457414 | None:intergenic | 20.0% |
| !!! | TATTTTCTGTTGCAAATTTT+TGG | - | chr6_1:78457493-78457512 | Msa0893690:intron | 20.0% |
| !! | TAATTTATGTAATCATGTGT+TGG | + | chr6_1:78458467-78458486 | None:intergenic | 20.0% |
| !! | TAATCAATTTGAGAACAAAT+TGG | + | chr6_1:78458920-78458939 | None:intergenic | 20.0% |
| !! | TTTGGATTAATATTGTATCA+AGG | - | chr6_1:78459025-78459044 | Msa0893690:CDS | 20.0% |
| !!! | TTGATGATGAATTGAAATCT+GGG | - | chr6_1:78455175-78455194 | Msa0893690:intron | 25.0% |
| ! | AAAAATAAGCTAACTCAAAC+AGG | + | chr6_1:78455671-78455690 | None:intergenic | 25.0% |
| ! | CTGAAAATAATTTATGGACA+TGG | - | chr6_1:78455701-78455720 | Msa0893690:intron | 25.0% |
| !! | GAATTTGTTTATGATAGCTT+AGG | + | chr6_1:78455740-78455759 | None:intergenic | 25.0% |
| !! | CTAGTAGATTAGTTCAAATA+AGG | - | chr6_1:78455773-78455792 | Msa0893690:intron | 25.0% |
| ! | TAAAGACACTTGATTCAAAA+GGG | + | chr6_1:78455939-78455958 | None:intergenic | 25.0% |
| ! | ATAAAGACACTTGATTCAAA+AGG | + | chr6_1:78455940-78455959 | None:intergenic | 25.0% |
| !! | CTAGTAGATTAGTTCAAATA+AGG | - | chr6_1:78455773-78455792 | Msa0893690:intron | 25.0% |
| !! | TTGAATTTGTTTGTAGTGTT+TGG | - | chr6_1:78456270-78456289 | Msa0893690:intron | 25.0% |
| ! | GTAGTGTTTGGTAAAATTAA+CGG | - | chr6_1:78456282-78456301 | Msa0893690:intron | 25.0% |
| ! | ACAGACTTATTTATTGTTTG+TGG | - | chr6_1:78456771-78456790 | Msa0893690:intron | 25.0% |
| ! | ACAATTTGATGAGCTAAATT+GGG | + | chr6_1:78456835-78456854 | None:intergenic | 25.0% |
| ! | TACAATTTGATGAGCTAAAT+TGG | + | chr6_1:78456836-78456855 | None:intergenic | 25.0% |
| ! | TTGAAATACAATAATGTGGA+GGG | + | chr6_1:78456876-78456895 | None:intergenic | 25.0% |
| !! | TTTGAAATACAATAATGTGG+AGG | + | chr6_1:78456877-78456896 | None:intergenic | 25.0% |
| !!! | ACATGTTGCTTTATTGTTAA+CGG | - | chr6_1:78457035-78457054 | Msa0893690:intron | 25.0% |
| !! | TGATACAGTCCTATAATTTT+AGG | - | chr6_1:78457070-78457089 | Msa0893690:intron | 25.0% |
| ! | ATTTATTTGAACGACCAAAT+AGG | - | chr6_1:78457378-78457397 | Msa0893690:intron | 25.0% |
| ! | TTCCTACTGAAAAATCTAAA+AGG | + | chr6_1:78457671-78457690 | None:intergenic | 25.0% |
| ! | ACTAATCGAAATTCAGAAAT+TGG | + | chr6_1:78458033-78458052 | None:intergenic | 25.0% |
| !! | TTCTTGTTATATGTTGAAGA+AGG | - | chr6_1:78458055-78458074 | Msa0893690:intron | 25.0% |
| ! | ATTAGAAGAAGTAAGGAAAA+TGG | + | chr6_1:78458115-78458134 | None:intergenic | 25.0% |
| ! | ATTATCTGTCATATGTAACT+AGG | - | chr6_1:78458182-78458201 | Msa0893690:intron | 25.0% |
| !! | TTTTACCGCGATAAATATAT+GGG | - | chr6_1:78458283-78458302 | Msa0893690:intron | 25.0% |
| ! | TAGACATGATAACACAAAAA+TGG | - | chr6_1:78458343-78458362 | Msa0893690:intron | 25.0% |
| ! | AACTATCATATTCTCTCTTA+GGG | + | chr6_1:78458826-78458845 | None:intergenic | 25.0% |
| ! | AAACTATCATATTCTCTCTT+AGG | + | chr6_1:78458827-78458846 | None:intergenic | 25.0% |
| !!! | TTGATGATGAATTGAAATCT+GGG | - | chr6_1:78455175-78455194 | Msa0893690:intron | 25.0% |
| ! | AAAAATAAGCTAACTCAAAC+AGG | + | chr6_1:78455671-78455690 | None:intergenic | 25.0% |
| ! | CTGAAAATAATTTATGGACA+TGG | - | chr6_1:78455701-78455720 | Msa0893690:intron | 25.0% |
| !! | GAATTTGTTTATGATAGCTT+AGG | + | chr6_1:78455740-78455759 | None:intergenic | 25.0% |
| !! | CTAGTAGATTAGTTCAAATA+AGG | - | chr6_1:78455773-78455792 | Msa0893690:intron | 25.0% |
| ! | TAAAGACACTTGATTCAAAA+GGG | + | chr6_1:78455939-78455958 | None:intergenic | 25.0% |
| ! | ATAAAGACACTTGATTCAAA+AGG | + | chr6_1:78455940-78455959 | None:intergenic | 25.0% |
| !! | CTAGTAGATTAGTTCAAATA+AGG | - | chr6_1:78455773-78455792 | Msa0893690:intron | 25.0% |
| !! | TTGAATTTGTTTGTAGTGTT+TGG | - | chr6_1:78456270-78456289 | Msa0893690:intron | 25.0% |
| ! | GTAGTGTTTGGTAAAATTAA+CGG | - | chr6_1:78456282-78456301 | Msa0893690:intron | 25.0% |
| ! | ACAGACTTATTTATTGTTTG+TGG | - | chr6_1:78456771-78456790 | Msa0893690:intron | 25.0% |
| ! | ACAATTTGATGAGCTAAATT+GGG | + | chr6_1:78456835-78456854 | None:intergenic | 25.0% |
| ! | TACAATTTGATGAGCTAAAT+TGG | + | chr6_1:78456836-78456855 | None:intergenic | 25.0% |
| ! | TTGAAATACAATAATGTGGA+GGG | + | chr6_1:78456876-78456895 | None:intergenic | 25.0% |
| !! | TTTGAAATACAATAATGTGG+AGG | + | chr6_1:78456877-78456896 | None:intergenic | 25.0% |
| !!! | ACATGTTGCTTTATTGTTAA+CGG | - | chr6_1:78457035-78457054 | Msa0893690:intron | 25.0% |
| !! | TGATACAGTCCTATAATTTT+AGG | - | chr6_1:78457070-78457089 | Msa0893690:intron | 25.0% |
| ! | ATTTATTTGAACGACCAAAT+AGG | - | chr6_1:78457378-78457397 | Msa0893690:intron | 25.0% |
| ! | TTCCTACTGAAAAATCTAAA+AGG | + | chr6_1:78457671-78457690 | None:intergenic | 25.0% |
| ! | ACTAATCGAAATTCAGAAAT+TGG | + | chr6_1:78458033-78458052 | None:intergenic | 25.0% |
| !! | TTCTTGTTATATGTTGAAGA+AGG | - | chr6_1:78458055-78458074 | Msa0893690:intron | 25.0% |
| ! | ATTAGAAGAAGTAAGGAAAA+TGG | + | chr6_1:78458115-78458134 | None:intergenic | 25.0% |
| ! | ATTATCTGTCATATGTAACT+AGG | - | chr6_1:78458182-78458201 | Msa0893690:intron | 25.0% |
| !! | TTTTACCGCGATAAATATAT+GGG | - | chr6_1:78458283-78458302 | Msa0893690:intron | 25.0% |
| ! | TAGACATGATAACACAAAAA+TGG | - | chr6_1:78458343-78458362 | Msa0893690:intron | 25.0% |
| ! | AACTATCATATTCTCTCTTA+GGG | + | chr6_1:78458826-78458845 | None:intergenic | 25.0% |
| ! | AAACTATCATATTCTCTCTT+AGG | + | chr6_1:78458827-78458846 | None:intergenic | 25.0% |
| !! | CTTGATGATGAATTGAAATC+TGG | - | chr6_1:78455174-78455193 | Msa0893690:intron | 30.0% |
| AAGTGTGTTTATTGTGTAAG+TGG | - | chr6_1:78455388-78455407 | Msa0893690:intron | 30.0% | |
| ! | TGTTTGGATATATGTTTTCG+TGG | - | chr6_1:78455481-78455500 | Msa0893690:intron | 30.0% |
| !! | AGTTCAAATAAGGCTTTGTT+TGG | - | chr6_1:78455783-78455802 | Msa0893690:intron | 30.0% |
| !! | AGTTCAAATAAGGCTTTGTT+TGG | - | chr6_1:78455783-78455802 | Msa0893690:intron | 30.0% |
| ! | GCTGTTTGTATAAGTTTTTG+TGG | - | chr6_1:78456039-78456058 | Msa0893690:intron | 30.0% |
| ! | AAGTTTTTGTGGAGAGTTTA+TGG | - | chr6_1:78456050-78456069 | Msa0893690:intron | 30.0% |
| !! | AGTTCAAATAAGGCTTTGTT+TGG | - | chr6_1:78455783-78455802 | Msa0893690:intron | 30.0% |
| ! | GATGATAAGTTAGCTTATAG+TGG | - | chr6_1:78456201-78456220 | Msa0893690:intron | 30.0% |
| TTTCATAAGCTCAATCCAAA+CGG | + | chr6_1:78456358-78456377 | None:intergenic | 30.0% | |
| CAAAATAAGCTCAATCCAAA+CGG | - | chr6_1:78456536-78456555 | Msa0893690:intron | 30.0% | |
| AAAATAAGCTCAATCCAAAC+GGG | - | chr6_1:78456537-78456556 | Msa0893690:intron | 30.0% | |
| ATTATAGGACTGTATCAACT+TGG | + | chr6_1:78457067-78457086 | None:intergenic | 30.0% | |
| ACTATGATAAGTTAGTTCCT+CGG | - | chr6_1:78457270-78457289 | Msa0893690:intron | 30.0% | |
| GAGAGATTGAGACTAATTTA+TGG | - | chr6_1:78457317-78457336 | Msa0893690:intron | 30.0% | |
| ATTGAGACTAATTTATGGAG+CGG | - | chr6_1:78457322-78457341 | Msa0893690:intron | 30.0% | |
| TGATTTATGAGTTTGTGCAT+TGG | - | chr6_1:78457446-78457465 | Msa0893690:intron | 30.0% | |
| TGACTTATTGATGAGTTTCT+TGG | - | chr6_1:78457516-78457535 | Msa0893690:intron | 30.0% | |
| !! | ATTGATGATGATGATGTCAT+TGG | - | chr6_1:78457594-78457613 | Msa0893690:intron | 30.0% |
| !! | TGCCTTTTAGATTTTTCAGT+AGG | - | chr6_1:78457666-78457685 | Msa0893690:intron | 30.0% |
| !! | GATTTTTCAGTAGGAATATG+CGG | - | chr6_1:78457675-78457694 | Msa0893690:intron | 30.0% |
| ! | CAAACATGCACTTAATGTTT+TGG | - | chr6_1:78457888-78457907 | Msa0893690:intron | 30.0% |
| ACTCTACAATCTAAACAAAG+TGG | + | chr6_1:78457922-78457941 | None:intergenic | 30.0% | |
| TATAATGTCATGTCTGTTGT+TGG | - | chr6_1:78457943-78457962 | Msa0893690:intron | 30.0% | |
| ! | GTATCTGATTAGTTCATCAT+TGG | + | chr6_1:78457990-78458009 | None:intergenic | 30.0% |
| GAAGTACATTAGAAGAAGTA+AGG | + | chr6_1:78458122-78458141 | None:intergenic | 30.0% | |
| TGACAGATAATGTCAACTAA+GGG | + | chr6_1:78458173-78458192 | None:intergenic | 30.0% | |
| ATGACAGATAATGTCAACTA+AGG | + | chr6_1:78458174-78458193 | None:intergenic | 30.0% | |
| TATGTAACTAGGACAAAACT+TGG | - | chr6_1:78458193-78458212 | Msa0893690:intron | 30.0% | |
| ATGTAACTAGGACAAAACTT+GGG | - | chr6_1:78458194-78458213 | Msa0893690:intron | 30.0% | |
| ATATTTATCGCGGTAAAACT+TGG | + | chr6_1:78458281-78458300 | None:intergenic | 30.0% | |
| ! | GTTTTACCGCGATAAATATA+TGG | - | chr6_1:78458282-78458301 | Msa0893690:intron | 30.0% |
| ! | CAATAGATTAAGGGTTTGTT+TGG | - | chr6_1:78458604-78458623 | Msa0893690:intron | 30.0% |
| !!! | GTTTGCTTCTTTTTTTAACC+AGG | - | chr6_1:78458972-78458991 | Msa0893690:CDS | 30.0% |
| CCAAAATAAATCACTTTGAC+CGG | + | chr6_1:78459010-78459029 | None:intergenic | 30.0% | |
| !! | CTTGATGATGAATTGAAATC+TGG | - | chr6_1:78455174-78455193 | Msa0893690:intron | 30.0% |
| AAGTGTGTTTATTGTGTAAG+TGG | - | chr6_1:78455388-78455407 | Msa0893690:intron | 30.0% | |
| ! | TGTTTGGATATATGTTTTCG+TGG | - | chr6_1:78455481-78455500 | Msa0893690:intron | 30.0% |
| !! | AGTTCAAATAAGGCTTTGTT+TGG | - | chr6_1:78455783-78455802 | Msa0893690:intron | 30.0% |
| !! | AGTTCAAATAAGGCTTTGTT+TGG | - | chr6_1:78455783-78455802 | Msa0893690:intron | 30.0% |
| ! | GCTGTTTGTATAAGTTTTTG+TGG | - | chr6_1:78456039-78456058 | Msa0893690:intron | 30.0% |
| ! | AAGTTTTTGTGGAGAGTTTA+TGG | - | chr6_1:78456050-78456069 | Msa0893690:intron | 30.0% |
| !! | AGTTCAAATAAGGCTTTGTT+TGG | - | chr6_1:78455783-78455802 | Msa0893690:intron | 30.0% |
| ! | GATGATAAGTTAGCTTATAG+TGG | - | chr6_1:78456201-78456220 | Msa0893690:intron | 30.0% |
| TTTCATAAGCTCAATCCAAA+CGG | + | chr6_1:78456358-78456377 | None:intergenic | 30.0% | |
| CAAAATAAGCTCAATCCAAA+CGG | - | chr6_1:78456536-78456555 | Msa0893690:intron | 30.0% | |
| AAAATAAGCTCAATCCAAAC+GGG | - | chr6_1:78456537-78456556 | Msa0893690:intron | 30.0% | |
| ATTATAGGACTGTATCAACT+TGG | + | chr6_1:78457067-78457086 | None:intergenic | 30.0% | |
| ACTATGATAAGTTAGTTCCT+CGG | - | chr6_1:78457270-78457289 | Msa0893690:intron | 30.0% | |
| GAGAGATTGAGACTAATTTA+TGG | - | chr6_1:78457317-78457336 | Msa0893690:intron | 30.0% | |
| ATTGAGACTAATTTATGGAG+CGG | - | chr6_1:78457322-78457341 | Msa0893690:intron | 30.0% | |
| TGATTTATGAGTTTGTGCAT+TGG | - | chr6_1:78457446-78457465 | Msa0893690:intron | 30.0% | |
| TGACTTATTGATGAGTTTCT+TGG | - | chr6_1:78457516-78457535 | Msa0893690:intron | 30.0% | |
| !! | ATTGATGATGATGATGTCAT+TGG | - | chr6_1:78457594-78457613 | Msa0893690:intron | 30.0% |
| !! | TGCCTTTTAGATTTTTCAGT+AGG | - | chr6_1:78457666-78457685 | Msa0893690:intron | 30.0% |
| !! | GATTTTTCAGTAGGAATATG+CGG | - | chr6_1:78457675-78457694 | Msa0893690:intron | 30.0% |
| ! | CAAACATGCACTTAATGTTT+TGG | - | chr6_1:78457888-78457907 | Msa0893690:intron | 30.0% |
| ACTCTACAATCTAAACAAAG+TGG | + | chr6_1:78457922-78457941 | None:intergenic | 30.0% | |
| TATAATGTCATGTCTGTTGT+TGG | - | chr6_1:78457943-78457962 | Msa0893690:intron | 30.0% | |
| ! | GTATCTGATTAGTTCATCAT+TGG | + | chr6_1:78457990-78458009 | None:intergenic | 30.0% |
| GAAGTACATTAGAAGAAGTA+AGG | + | chr6_1:78458122-78458141 | None:intergenic | 30.0% | |
| TGACAGATAATGTCAACTAA+GGG | + | chr6_1:78458173-78458192 | None:intergenic | 30.0% | |
| ATGACAGATAATGTCAACTA+AGG | + | chr6_1:78458174-78458193 | None:intergenic | 30.0% | |
| TATGTAACTAGGACAAAACT+TGG | - | chr6_1:78458193-78458212 | Msa0893690:intron | 30.0% | |
| ATGTAACTAGGACAAAACTT+GGG | - | chr6_1:78458194-78458213 | Msa0893690:intron | 30.0% | |
| ATATTTATCGCGGTAAAACT+TGG | + | chr6_1:78458281-78458300 | None:intergenic | 30.0% | |
| ! | GTTTTACCGCGATAAATATA+TGG | - | chr6_1:78458282-78458301 | Msa0893690:intron | 30.0% |
| ! | CAATAGATTAAGGGTTTGTT+TGG | - | chr6_1:78458604-78458623 | Msa0893690:intron | 30.0% |
| !!! | GTTTGCTTCTTTTTTTAACC+AGG | - | chr6_1:78458972-78458991 | Msa0893690:CDS | 30.0% |
| CCAAAATAAATCACTTTGAC+CGG | + | chr6_1:78459010-78459029 | None:intergenic | 30.0% | |
| !!! | TTGGAGTTTTGTTTGGATTC+TGG | + | chr6_1:78454983-78455002 | None:intergenic | 35.0% |
| TCTTGTTAAACGACATCGTA+TGG | - | chr6_1:78455140-78455159 | Msa0893690:intron | 35.0% | |
| ACTTCAGGGTTAATTTCCTT+CGG | + | chr6_1:78455231-78455250 | None:intergenic | 35.0% | |
| AACCCTGAAGTGAAATGATA+CGG | - | chr6_1:78455240-78455259 | Msa0893690:intron | 35.0% | |
| CATGTAATCTGTAAGCTGTT+TGG | - | chr6_1:78455465-78455484 | Msa0893690:intron | 35.0% | |
| ! | ATGTTTTCGTGGAGAGATTA+TGG | - | chr6_1:78455492-78455511 | Msa0893690:intron | 35.0% |
| AGGCAATAAGTCTGTTTGAT+TGG | + | chr6_1:78455651-78455670 | None:intergenic | 35.0% | |
| ACAAACAGCTTACAGATTAC+AGG | + | chr6_1:78456028-78456047 | None:intergenic | 35.0% | |
| ATTAATATTTAGGCCCCGTT+TGG | - | chr6_1:78456340-78456359 | Msa0893690:intron | 35.0% | |
| TTCATAAGCTCAATCCAAAC+GGG | + | chr6_1:78456357-78456376 | None:intergenic | 35.0% | |
| AATAAAATTAAGGGCCCGTT+TGG | + | chr6_1:78456554-78456573 | None:intergenic | 35.0% | |
| GTTCAGATTTGTACTTCTGT+TGG | + | chr6_1:78457004-78457023 | None:intergenic | 35.0% | |
| !! | TGTTGCTTTATTGTTAACGG+AGG | - | chr6_1:78457038-78457057 | Msa0893690:intron | 35.0% |
| ! | GTTGCTTTATTGTTAACGGA+GGG | - | chr6_1:78457039-78457058 | Msa0893690:intron | 35.0% |
| ! | TTGCTTTATTGTTAACGGAG+GGG | - | chr6_1:78457040-78457059 | Msa0893690:intron | 35.0% |
| TCAAGTTAGACTCTGAACTA+TGG | + | chr6_1:78457299-78457318 | None:intergenic | 35.0% | |
| !!! | GGTTTTAAGCATAGTAGTAC+TGG | - | chr6_1:78457615-78457634 | Msa0893690:intron | 35.0% |
| ATGAGAAGAGCTTCTCATAT+TGG | - | chr6_1:78457641-78457660 | Msa0893690:intron | 35.0% | |
| GAAATGAAACTCATCCTGTT+TGG | + | chr6_1:78457707-78457726 | None:intergenic | 35.0% | |
| !!! | TAGGGATGCTGTTTAGTTTT+TGG | - | chr6_1:78457733-78457752 | Msa0893690:intron | 35.0% |
| !! | TAAGTGCATGTTTGCTTTTG+CGG | + | chr6_1:78457882-78457901 | None:intergenic | 35.0% |
| ! | GGAACGATAGAAAAGTTTTG+TGG | + | chr6_1:78458012-78458031 | None:intergenic | 35.0% |
| CTTCTTCTAATGTACTTCAG+AGG | - | chr6_1:78458124-78458143 | Msa0893690:intron | 35.0% | |
| TGTAACTAGGACAAAACTTG+GGG | - | chr6_1:78458195-78458214 | Msa0893690:intron | 35.0% | |
| CTTGTCCCATATATTTATCG+CGG | + | chr6_1:78458291-78458310 | None:intergenic | 35.0% | |
| TAGAGTGTGATCTATGAAGA+AGG | - | chr6_1:78458383-78458402 | Msa0893690:intron | 35.0% | |
| AGTGTGGTAGATTGTAAGTT+TGG | - | chr6_1:78458539-78458558 | Msa0893690:intron | 35.0% | |
| GTGGAGTGACAATAGATTAA+GGG | - | chr6_1:78458595-78458614 | Msa0893690:intron | 35.0% | |
| AGTGCTAAACAACACTACAA+GGG | + | chr6_1:78458890-78458909 | None:intergenic | 35.0% | |
| TAGTGCTAAACAACACTACA+AGG | + | chr6_1:78458891-78458910 | None:intergenic | 35.0% | |
| AACCAGGTTATTGTAGTAAC+CGG | - | chr6_1:78458988-78459007 | Msa0893690:CDS | 35.0% | |
| ! | CCGGTCAAAGTGATTTATTT+TGG | - | chr6_1:78459007-78459026 | Msa0893690:CDS | 35.0% |
| !!! | TTGGAGTTTTGTTTGGATTC+TGG | + | chr6_1:78454983-78455002 | None:intergenic | 35.0% |
| TCTTGTTAAACGACATCGTA+TGG | - | chr6_1:78455140-78455159 | Msa0893690:intron | 35.0% | |
| ACTTCAGGGTTAATTTCCTT+CGG | + | chr6_1:78455231-78455250 | None:intergenic | 35.0% | |
| AACCCTGAAGTGAAATGATA+CGG | - | chr6_1:78455240-78455259 | Msa0893690:intron | 35.0% | |
| CATGTAATCTGTAAGCTGTT+TGG | - | chr6_1:78455465-78455484 | Msa0893690:intron | 35.0% | |
| ! | ATGTTTTCGTGGAGAGATTA+TGG | - | chr6_1:78455492-78455511 | Msa0893690:intron | 35.0% |
| AGGCAATAAGTCTGTTTGAT+TGG | + | chr6_1:78455651-78455670 | None:intergenic | 35.0% | |
| ACAAACAGCTTACAGATTAC+AGG | + | chr6_1:78456028-78456047 | None:intergenic | 35.0% | |
| ATTAATATTTAGGCCCCGTT+TGG | - | chr6_1:78456340-78456359 | Msa0893690:intron | 35.0% | |
| TTCATAAGCTCAATCCAAAC+GGG | + | chr6_1:78456357-78456376 | None:intergenic | 35.0% | |
| AATAAAATTAAGGGCCCGTT+TGG | + | chr6_1:78456554-78456573 | None:intergenic | 35.0% | |
| GTTCAGATTTGTACTTCTGT+TGG | + | chr6_1:78457004-78457023 | None:intergenic | 35.0% | |
| !! | TGTTGCTTTATTGTTAACGG+AGG | - | chr6_1:78457038-78457057 | Msa0893690:intron | 35.0% |
| ! | GTTGCTTTATTGTTAACGGA+GGG | - | chr6_1:78457039-78457058 | Msa0893690:intron | 35.0% |
| ! | TTGCTTTATTGTTAACGGAG+GGG | - | chr6_1:78457040-78457059 | Msa0893690:intron | 35.0% |
| TCAAGTTAGACTCTGAACTA+TGG | + | chr6_1:78457299-78457318 | None:intergenic | 35.0% | |
| !!! | GGTTTTAAGCATAGTAGTAC+TGG | - | chr6_1:78457615-78457634 | Msa0893690:intron | 35.0% |
| ATGAGAAGAGCTTCTCATAT+TGG | - | chr6_1:78457641-78457660 | Msa0893690:intron | 35.0% | |
| GAAATGAAACTCATCCTGTT+TGG | + | chr6_1:78457707-78457726 | None:intergenic | 35.0% | |
| !!! | TAGGGATGCTGTTTAGTTTT+TGG | - | chr6_1:78457733-78457752 | Msa0893690:intron | 35.0% |
| !! | TAAGTGCATGTTTGCTTTTG+CGG | + | chr6_1:78457882-78457901 | None:intergenic | 35.0% |
| ! | GGAACGATAGAAAAGTTTTG+TGG | + | chr6_1:78458012-78458031 | None:intergenic | 35.0% |
| CTTCTTCTAATGTACTTCAG+AGG | - | chr6_1:78458124-78458143 | Msa0893690:intron | 35.0% | |
| TGTAACTAGGACAAAACTTG+GGG | - | chr6_1:78458195-78458214 | Msa0893690:intron | 35.0% | |
| CTTGTCCCATATATTTATCG+CGG | + | chr6_1:78458291-78458310 | None:intergenic | 35.0% | |
| TAGAGTGTGATCTATGAAGA+AGG | - | chr6_1:78458383-78458402 | Msa0893690:intron | 35.0% | |
| AGTGTGGTAGATTGTAAGTT+TGG | - | chr6_1:78458539-78458558 | Msa0893690:intron | 35.0% | |
| GTGGAGTGACAATAGATTAA+GGG | - | chr6_1:78458595-78458614 | Msa0893690:intron | 35.0% | |
| AGTGCTAAACAACACTACAA+GGG | + | chr6_1:78458890-78458909 | None:intergenic | 35.0% | |
| TAGTGCTAAACAACACTACA+AGG | + | chr6_1:78458891-78458910 | None:intergenic | 35.0% | |
| AACCAGGTTATTGTAGTAAC+CGG | - | chr6_1:78458988-78459007 | Msa0893690:CDS | 35.0% | |
| ! | CCGGTCAAAGTGATTTATTT+TGG | - | chr6_1:78459007-78459026 | Msa0893690:CDS | 35.0% |
| !!! | GAGTTTTGTTTGGATTCTGG+TGG | + | chr6_1:78454980-78454999 | None:intergenic | 40.0% |
| !!! | GGGATGATTGGAGTTTTGTT+TGG | + | chr6_1:78454990-78455009 | None:intergenic | 40.0% |
| ATCGTTTCGGAGAAATTCGA+AGG | - | chr6_1:78455111-78455130 | Msa0893690:intron | 40.0% | |
| CACCGTATCATTTCACTTCA+GGG | + | chr6_1:78455245-78455264 | None:intergenic | 40.0% | |
| ! | TGAAATGATACGGTGCGTTT+TGG | - | chr6_1:78455250-78455269 | Msa0893690:intron | 40.0% |
| TCATAAGCTCAATCCAAACG+GGG | + | chr6_1:78456356-78456375 | None:intergenic | 40.0% | |
| ! | GCTTTAAGTTCGTGAGAATG+TGG | - | chr6_1:78456672-78456691 | Msa0893690:intron | 40.0% |
| TTAAGTTCGTGAGAATGTGG+CGG | - | chr6_1:78456675-78456694 | Msa0893690:intron | 40.0% | |
| CGGAGACTATAATGACATTG+AGG | + | chr6_1:78456975-78456994 | None:intergenic | 40.0% | |
| TGTACTTCTGTTGGCAATTG+CGG | + | chr6_1:78456995-78457014 | None:intergenic | 40.0% | |
| ATGAAACTCATCCTGTTTGG+AGG | + | chr6_1:78457704-78457723 | None:intergenic | 40.0% | |
| ACAGGATGAGTTTCATTTCC+TGG | - | chr6_1:78457708-78457727 | Msa0893690:intron | 40.0% | |
| CAGGATGAGTTTCATTTCCT+GGG | - | chr6_1:78457709-78457728 | Msa0893690:intron | 40.0% | |
| ! | TCTGTTGTTGGTATTGAGTC+TGG | - | chr6_1:78457955-78457974 | Msa0893690:intron | 40.0% |
| ! | TGTTGAAGAAGGTAGTTCTG+AGG | - | chr6_1:78458066-78458085 | Msa0893690:intron | 40.0% |
| TGTCTGTGCTTCATATAGTG+TGG | - | chr6_1:78458523-78458542 | Msa0893690:intron | 40.0% | |
| GGTGGAGTGACAATAGATTA+AGG | - | chr6_1:78458594-78458613 | Msa0893690:intron | 40.0% | |
| ATATCCCGACTCTCTTATCT+TGG | - | chr6_1:78458852-78458871 | Msa0893690:CDS | 40.0% | |
| !!! | GAGTTTTGTTTGGATTCTGG+TGG | + | chr6_1:78454980-78454999 | None:intergenic | 40.0% |
| !!! | GGGATGATTGGAGTTTTGTT+TGG | + | chr6_1:78454990-78455009 | None:intergenic | 40.0% |
| ATCGTTTCGGAGAAATTCGA+AGG | - | chr6_1:78455111-78455130 | Msa0893690:intron | 40.0% | |
| CACCGTATCATTTCACTTCA+GGG | + | chr6_1:78455245-78455264 | None:intergenic | 40.0% | |
| ! | TGAAATGATACGGTGCGTTT+TGG | - | chr6_1:78455250-78455269 | Msa0893690:intron | 40.0% |
| TCATAAGCTCAATCCAAACG+GGG | + | chr6_1:78456356-78456375 | None:intergenic | 40.0% | |
| ! | GCTTTAAGTTCGTGAGAATG+TGG | - | chr6_1:78456672-78456691 | Msa0893690:intron | 40.0% |
| TTAAGTTCGTGAGAATGTGG+CGG | - | chr6_1:78456675-78456694 | Msa0893690:intron | 40.0% | |
| CGGAGACTATAATGACATTG+AGG | + | chr6_1:78456975-78456994 | None:intergenic | 40.0% | |
| TGTACTTCTGTTGGCAATTG+CGG | + | chr6_1:78456995-78457014 | None:intergenic | 40.0% | |
| ATGAAACTCATCCTGTTTGG+AGG | + | chr6_1:78457704-78457723 | None:intergenic | 40.0% | |
| ACAGGATGAGTTTCATTTCC+TGG | - | chr6_1:78457708-78457727 | Msa0893690:intron | 40.0% | |
| CAGGATGAGTTTCATTTCCT+GGG | - | chr6_1:78457709-78457728 | Msa0893690:intron | 40.0% | |
| ! | TCTGTTGTTGGTATTGAGTC+TGG | - | chr6_1:78457955-78457974 | Msa0893690:intron | 40.0% |
| ! | TGTTGAAGAAGGTAGTTCTG+AGG | - | chr6_1:78458066-78458085 | Msa0893690:intron | 40.0% |
| TGTCTGTGCTTCATATAGTG+TGG | - | chr6_1:78458523-78458542 | Msa0893690:intron | 40.0% | |
| GGTGGAGTGACAATAGATTA+AGG | - | chr6_1:78458594-78458613 | Msa0893690:intron | 40.0% | |
| ATATCCCGACTCTCTTATCT+TGG | - | chr6_1:78458852-78458871 | Msa0893690:CDS | 40.0% | |
| !! | CACGTCGTCTAGCTCTATAA+GGG | + | chr6_1:78455022-78455041 | None:intergenic | 45.0% |
| !! | ACACGTCGTCTAGCTCTATA+AGG | + | chr6_1:78455023-78455042 | None:intergenic | 45.0% |
| GCTTCATGCTCTTTCCATTG+TGG | - | chr6_1:78455197-78455216 | Msa0893690:intron | 45.0% | |
| GCACCGTATCATTTCACTTC+AGG | + | chr6_1:78455246-78455265 | None:intergenic | 45.0% | |
| CTCTCCTAAACAGACTCACA+AGG | - | chr6_1:78455564-78455583 | Msa0893690:intron | 45.0% | |
| !! | ATGGCCTTGTGAGTCTGTTT+AGG | + | chr6_1:78455571-78455590 | None:intergenic | 45.0% |
| TGTGGAGGGCTAAGTTCATA+AGG | + | chr6_1:78456862-78456881 | None:intergenic | 45.0% | |
| TGAGTTTCATTTCCTGGGCT+AGG | - | chr6_1:78457714-78457733 | Msa0893690:intron | 45.0% | |
| GAGTTTCATTTCCTGGGCTA+GGG | - | chr6_1:78457715-78457734 | Msa0893690:intron | 45.0% | |
| CTTCTGAGTTCACTTTGCCT+CGG | - | chr6_1:78457834-78457853 | Msa0893690:intron | 45.0% | |
| TTCTGAGTTCACTTTGCCTC+GGG | - | chr6_1:78457835-78457854 | Msa0893690:intron | 45.0% | |
| !! | TCTATGAAGAAGGTACTCCC+CGG | - | chr6_1:78458393-78458412 | Msa0893690:intron | 45.0% |
| ATTCTCTCTTAGGGCTCGTT+TGG | + | chr6_1:78458817-78458836 | None:intergenic | 45.0% | |
| GTGACCAAGATAAGAGAGTC+GGG | + | chr6_1:78458859-78458878 | None:intergenic | 45.0% | |
| CGTGACCAAGATAAGAGAGT+CGG | + | chr6_1:78458860-78458879 | None:intergenic | 45.0% | |
| GACCGGTTACTACAATAACC+TGG | + | chr6_1:78458993-78459012 | None:intergenic | 45.0% | |
| !! | CACGTCGTCTAGCTCTATAA+GGG | + | chr6_1:78455022-78455041 | None:intergenic | 45.0% |
| !! | ACACGTCGTCTAGCTCTATA+AGG | + | chr6_1:78455023-78455042 | None:intergenic | 45.0% |
| GCTTCATGCTCTTTCCATTG+TGG | - | chr6_1:78455197-78455216 | Msa0893690:intron | 45.0% | |
| GCACCGTATCATTTCACTTC+AGG | + | chr6_1:78455246-78455265 | None:intergenic | 45.0% | |
| CTCTCCTAAACAGACTCACA+AGG | - | chr6_1:78455564-78455583 | Msa0893690:intron | 45.0% | |
| !! | ATGGCCTTGTGAGTCTGTTT+AGG | + | chr6_1:78455571-78455590 | None:intergenic | 45.0% |
| TGTGGAGGGCTAAGTTCATA+AGG | + | chr6_1:78456862-78456881 | None:intergenic | 45.0% | |
| TGAGTTTCATTTCCTGGGCT+AGG | - | chr6_1:78457714-78457733 | Msa0893690:intron | 45.0% | |
| GAGTTTCATTTCCTGGGCTA+GGG | - | chr6_1:78457715-78457734 | Msa0893690:intron | 45.0% | |
| CTTCTGAGTTCACTTTGCCT+CGG | - | chr6_1:78457834-78457853 | Msa0893690:intron | 45.0% | |
| TTCTGAGTTCACTTTGCCTC+GGG | - | chr6_1:78457835-78457854 | Msa0893690:intron | 45.0% | |
| !! | TCTATGAAGAAGGTACTCCC+CGG | - | chr6_1:78458393-78458412 | Msa0893690:intron | 45.0% |
| ATTCTCTCTTAGGGCTCGTT+TGG | + | chr6_1:78458817-78458836 | None:intergenic | 45.0% | |
| GTGACCAAGATAAGAGAGTC+GGG | + | chr6_1:78458859-78458878 | None:intergenic | 45.0% | |
| CGTGACCAAGATAAGAGAGT+CGG | + | chr6_1:78458860-78458879 | None:intergenic | 45.0% | |
| GACCGGTTACTACAATAACC+TGG | + | chr6_1:78458993-78459012 | None:intergenic | 45.0% | |
| !! | GTCTAGCTCTATAAGGGTGG+CGG | + | chr6_1:78455016-78455035 | None:intergenic | 50.0% |
| !! | GTCGTCTAGCTCTATAAGGG+TGG | + | chr6_1:78455019-78455038 | None:intergenic | 50.0% |
| ACTCTGAACTATGGCTACCG+AGG | + | chr6_1:78457290-78457309 | None:intergenic | 50.0% | |
| ATATGCGGCTTCCTCCAAAC+AGG | - | chr6_1:78457690-78457709 | Msa0893690:intron | 50.0% | |
| !! | CTATGAAGAAGGTACTCCCC+GGG | - | chr6_1:78458394-78458413 | Msa0893690:intron | 50.0% |
| ACATATCCGACACCGTAACC+CGG | + | chr6_1:78458415-78458434 | None:intergenic | 50.0% | |
| CGACTCCACACTAGAAACGT+TGG | - | chr6_1:78458573-78458592 | Msa0893690:intron | 50.0% | |
| CTCCACACTAGAAACGTTGG+TGG | - | chr6_1:78458576-78458595 | Msa0893690:intron | 50.0% | |
| !! | CTCCACCAACGTTTCTAGTG+TGG | + | chr6_1:78458581-78458600 | None:intergenic | 50.0% |
| !! | GTCTAGCTCTATAAGGGTGG+CGG | + | chr6_1:78455016-78455035 | None:intergenic | 50.0% |
| !! | GTCGTCTAGCTCTATAAGGG+TGG | + | chr6_1:78455019-78455038 | None:intergenic | 50.0% |
| ACTCTGAACTATGGCTACCG+AGG | + | chr6_1:78457290-78457309 | None:intergenic | 50.0% | |
| ATATGCGGCTTCCTCCAAAC+AGG | - | chr6_1:78457690-78457709 | Msa0893690:intron | 50.0% | |
| !! | CTATGAAGAAGGTACTCCCC+GGG | - | chr6_1:78458394-78458413 | Msa0893690:intron | 50.0% |
| ACATATCCGACACCGTAACC+CGG | + | chr6_1:78458415-78458434 | None:intergenic | 50.0% | |
| CGACTCCACACTAGAAACGT+TGG | - | chr6_1:78458573-78458592 | Msa0893690:intron | 50.0% | |
| CTCCACACTAGAAACGTTGG+TGG | - | chr6_1:78458576-78458595 | Msa0893690:intron | 50.0% | |
| !! | CTCCACCAACGTTTCTAGTG+TGG | + | chr6_1:78458581-78458600 | None:intergenic | 50.0% |
| !! | CTCTATAAGGGTGGCGGAGA+GGG | + | chr6_1:78455010-78455029 | None:intergenic | 55.0% |
| GACGTGTCGTATCAACACGC+AGG | - | chr6_1:78455036-78455055 | Msa0893690:intron | 55.0% | |
| ! | CTTCGGCGTTTTCGCCACAA+TGG | + | chr6_1:78455214-78455233 | None:intergenic | 55.0% |
| CATTGTGGCGAAAACGCCGA+AGG | - | chr6_1:78455212-78455231 | Msa0893690:intron | 55.0% | |
| AGAATGTGGCGGTTGCGAAG+CGG | - | chr6_1:78456686-78456705 | Msa0893690:intron | 55.0% | |
| CTAAACAGCATCCCTAGCCC+AGG | + | chr6_1:78457729-78457748 | None:intergenic | 55.0% | |
| !! | AGAAGGTACTCCCCGGGTTA+CGG | - | chr6_1:78458400-78458419 | Msa0893690:intron | 55.0% |
| ATATCCGACACCGTAACCCG+GGG | + | chr6_1:78458413-78458432 | None:intergenic | 55.0% | |
| CATATCCGACACCGTAACCC+GGG | + | chr6_1:78458414-78458433 | None:intergenic | 55.0% | |
| !! | GTGTTGGTGTCGTGTCGTGT+CGG | + | chr6_1:78458451-78458470 | None:intergenic | 55.0% |
| !! | CTCTATAAGGGTGGCGGAGA+GGG | + | chr6_1:78455010-78455029 | None:intergenic | 55.0% |
| GACGTGTCGTATCAACACGC+AGG | - | chr6_1:78455036-78455055 | Msa0893690:intron | 55.0% | |
| ! | CTTCGGCGTTTTCGCCACAA+TGG | + | chr6_1:78455214-78455233 | None:intergenic | 55.0% |
| CATTGTGGCGAAAACGCCGA+AGG | - | chr6_1:78455212-78455231 | Msa0893690:intron | 55.0% | |
| AGAATGTGGCGGTTGCGAAG+CGG | - | chr6_1:78456686-78456705 | Msa0893690:intron | 55.0% | |
| CTAAACAGCATCCCTAGCCC+AGG | + | chr6_1:78457729-78457748 | None:intergenic | 55.0% | |
| !! | AGAAGGTACTCCCCGGGTTA+CGG | - | chr6_1:78458400-78458419 | Msa0893690:intron | 55.0% |
| ATATCCGACACCGTAACCCG+GGG | + | chr6_1:78458413-78458432 | None:intergenic | 55.0% | |
| CATATCCGACACCGTAACCC+GGG | + | chr6_1:78458414-78458433 | None:intergenic | 55.0% | |
| !! | GTGTTGGTGTCGTGTCGTGT+CGG | + | chr6_1:78458451-78458470 | None:intergenic | 55.0% |
| !! | GCTCTATAAGGGTGGCGGAG+AGG | + | chr6_1:78455011-78455030 | None:intergenic | 60.0% |
| GAATGTGGCGGTTGCGAAGC+GGG | - | chr6_1:78456687-78456706 | Msa0893690:intron | 60.0% | |
| TGTTGTGTTCTCGCGTCCCG+AGG | + | chr6_1:78457854-78457873 | None:intergenic | 60.0% | |
| TACTCCCCGGGTTACGGTGT+CGG | - | chr6_1:78458406-78458425 | Msa0893690:intron | 60.0% | |
| ! | GTGTCGTGTCGTGTCGGTGT+TGG | + | chr6_1:78458445-78458464 | None:intergenic | 60.0% |
| !! | GCTCTATAAGGGTGGCGGAG+AGG | + | chr6_1:78455011-78455030 | None:intergenic | 60.0% |
| GAATGTGGCGGTTGCGAAGC+GGG | - | chr6_1:78456687-78456706 | Msa0893690:intron | 60.0% | |
| TGTTGTGTTCTCGCGTCCCG+AGG | + | chr6_1:78457854-78457873 | None:intergenic | 60.0% | |
| TACTCCCCGGGTTACGGTGT+CGG | - | chr6_1:78458406-78458425 | Msa0893690:intron | 60.0% | |
| ! | GTGTCGTGTCGTGTCGGTGT+TGG | + | chr6_1:78458445-78458464 | None:intergenic | 60.0% |
| !! | GGGTGGCGGAGAGGGATGAT+TGG | + | chr6_1:78455002-78455021 | None:intergenic | 65.0% |
| !! | GGGTGGCGGAGAGGGATGAT+TGG | + | chr6_1:78455002-78455021 | None:intergenic | 65.0% |
| GGCGCGTGAGAGCAGTGTGG+TGG | + | chr6_1:78454959-78454978 | None:intergenic | 70.0% | |
| GGTGGCGCGTGAGAGCAGTG+TGG | + | chr6_1:78454962-78454981 | None:intergenic | 70.0% | |
| GGCGCGTGAGAGCAGTGTGG+TGG | + | chr6_1:78454959-78454978 | None:intergenic | 70.0% | |
| GGTGGCGCGTGAGAGCAGTG+TGG | + | chr6_1:78454962-78454981 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_1 | gene | 78454954 | 78459055 | 78454954 | ID=Msa0893690;Name=Msa0893690 |
| chr6_1 | mRNA | 78454954 | 78459055 | 78454954 | ID=Msa0893690-mRNA-1;Parent=Msa0893690;Name=Msa0893690-mRNA-1;_AED=0.31;_eAED=0.51;_QI=0|0|0|1|0|0|4|0|97 |
| chr6_1 | exon | 78458971 | 78459055 | 78458971 | ID=Msa0893690-mRNA-1:exon:13087;Parent=Msa0893690-mRNA-1 |
| chr6_1 | exon | 78458761 | 78458951 | 78458761 | ID=Msa0893690-mRNA-1:exon:13086;Parent=Msa0893690-mRNA-1 |
| chr6_1 | exon | 78455010 | 78455015 | 78455010 | ID=Msa0893690-mRNA-1:exon:13085;Parent=Msa0893690-mRNA-1 |
| chr6_1 | exon | 78454954 | 78454962 | 78454954 | ID=Msa0893690-mRNA-1:exon:13084;Parent=Msa0893690-mRNA-1 |
| chr6_1 | CDS | 78458971 | 78459055 | 78458971 | ID=Msa0893690-mRNA-1:cds;Parent=Msa0893690-mRNA-1 |
| chr6_1 | CDS | 78458761 | 78458951 | 78458761 | ID=Msa0893690-mRNA-1:cds;Parent=Msa0893690-mRNA-1 |
| chr6_1 | CDS | 78455010 | 78455015 | 78455010 | ID=Msa0893690-mRNA-1:cds;Parent=Msa0893690-mRNA-1 |
| chr6_1 | CDS | 78454954 | 78454962 | 78454954 | ID=Msa0893690-mRNA-1:cds;Parent=Msa0893690-mRNA-1 |
| Gene Sequence |
| Protein sequence |
