Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1133390 | AES76469.1 | 74.713 | 87 | 22 | 0 | 7 | 93 | 18 | 104 | 5.97e-37 | 130 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1133390 | sp|Q682I1|BOLA1_ARATH | 67.797 | 59 | 19 | 0 | 30 | 88 | 97 | 155 | 2.71e-22 | 87.8 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1133390 | G7KL80 | 74.713 | 87 | 22 | 0 | 7 | 93 | 18 | 104 | 2.85e-37 | 130 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0893630 | Msa1133390 | 0.981213 | 4.808860e-152 | -8.615850e-47 |
| Msa0893690 | Msa1133390 | 0.838700 | 2.460791e-57 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1133390 | MtrunA17_Chr6g0481551 | 74.713 | 87 | 22 | 0 | 7 | 93 | 18 | 104 | 5.49e-41 | 130 |
| Msa1133390 | MtrunA17_Chr1g0170001 | 63.333 | 60 | 21 | 1 | 30 | 89 | 292 | 350 | 6.95e-20 | 82.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1133390 | AT1G55805.1 | 67.797 | 59 | 19 | 0 | 30 | 88 | 97 | 155 | 2.75e-23 | 87.8 |
| Msa1133390 | AT4G26500.1 | 66.129 | 62 | 19 | 1 | 30 | 89 | 310 | 371 | 1.81e-21 | 86.7 |
Find 16 sgRNAs with CRISPR-Local
Find 380 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTGATGATGAATTGAAATC+TGG | 0.289460 | 7_3:+86857005 | Msa1133390:CDS |
| ACACGTCGTCTAGCTCTATA+AGG | 0.321269 | 7_3:-86856851 | None:intergenic |
| TTTCAATTTGAAAATCGTTT+CGG | 0.390771 | 7_3:+86856929 | Msa1133390:CDS |
| CTCTATAAGGGTGGCGGAGA+GGG | 0.419218 | 7_3:-86856838 | None:intergenic |
| ACTTCAGGGTTAATTTCCTT+CGG | 0.427168 | 7_3:-86857059 | None:intergenic |
| GGGTGGCGGAGAGGGATGAT+TGG | 0.453980 | 7_3:-86856830 | None:intergenic |
| TCTTGTTAAACGACATCGTA+TGG | 0.487307 | 7_3:+86856971 | Msa1133390:CDS |
| TTGATGATGAATTGAAATCT+GGG | 0.490766 | 7_3:+86857006 | Msa1133390:CDS |
| ATCGTTTCGGAGAAATTCGA+AGG | 0.523092 | 7_3:+86856942 | Msa1133390:CDS |
| GCTTCATGCTCTTTCCATTG+TGG | 0.550728 | 7_3:+86857028 | Msa1133390:CDS |
| CATTGTGGCGAAAACGCCGA+AGG | 0.564619 | 7_3:+86857043 | Msa1133390:CDS |
| CACGTCGTCTAGCTCTATAA+GGG | 0.584411 | 7_3:-86856850 | None:intergenic |
| GTCTAGCTCTATAAGGGTGG+CGG | 0.602686 | 7_3:-86856844 | None:intergenic |
| GCTCTATAAGGGTGGCGGAG+AGG | 0.611742 | 7_3:-86856839 | None:intergenic |
| GGCGCGTGAGAGCAGTGTGG+TGG | 0.631194 | 7_3:-86856787 | None:intergenic |
| GGTGGCGCGTGAGAGCAGTG+TGG | 0.785749 | 7_3:-86856790 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATAAGTTGAAAATAATTTA+TGG | + | chr7_3:86857905-86857924 | Msa1133390:intron | 10.0% |
| !! | GAGATATTTAATTAATATTT+AGG | + | chr7_3:86858161-86858180 | Msa1133390:intron | 10.0% |
| !! | CTTAATTGAAATAAAATTAA+GGG | - | chr7_3:86858394-86858413 | None:intergenic | 10.0% |
| !! | TCTTAATTGAAATAAAATTA+AGG | - | chr7_3:86858395-86858414 | None:intergenic | 10.0% |
| !!! | TAATTTTCTCAAATTATTAT+TGG | + | chr7_3:86860320-86860339 | Msa1133390:intron | 10.0% |
| !!! | AATAAGTTGAAAATAATTTA+TGG | + | chr7_3:86857905-86857924 | Msa1133390:intron | 10.0% |
| !! | GAGATATTTAATTAATATTT+AGG | + | chr7_3:86858161-86858180 | Msa1133390:intron | 10.0% |
| !! | CTTAATTGAAATAAAATTAA+GGG | - | chr7_3:86858394-86858413 | None:intergenic | 10.0% |
| !! | TCTTAATTGAAATAAAATTA+AGG | - | chr7_3:86858395-86858414 | None:intergenic | 10.0% |
| !!! | TAATTTTCTCAAATTATTAT+TGG | + | chr7_3:86860320-86860339 | Msa1133390:intron | 10.0% |
| !! | TTTATTTCAATTAAGATTGT+AGG | + | chr7_3:86858399-86858418 | Msa1133390:intron | 15.0% |
| !! | TTATTTCAATTAAGATTGTA+GGG | + | chr7_3:86858400-86858419 | Msa1133390:intron | 15.0% |
| !!! | AATTTAGTTCCTAAAATTAT+AGG | - | chr7_3:86858913-86858932 | None:intergenic | 15.0% |
| !!! | ATTTTTCATTGTAGTTTTTT+AGG | + | chr7_3:86858945-86858964 | Msa1133390:intron | 15.0% |
| !! | AATTGATTATTTGATTAAGT+TGG | + | chr7_3:86860762-86860781 | Msa1133390:intron | 15.0% |
| !! | TTTATTTCAATTAAGATTGT+AGG | + | chr7_3:86858399-86858418 | Msa1133390:intron | 15.0% |
| !! | TTATTTCAATTAAGATTGTA+GGG | + | chr7_3:86858400-86858419 | Msa1133390:intron | 15.0% |
| !!! | AATTTAGTTCCTAAAATTAT+AGG | - | chr7_3:86858913-86858932 | None:intergenic | 15.0% |
| !!! | ATTTTTCATTGTAGTTTTTT+AGG | + | chr7_3:86858945-86858964 | Msa1133390:intron | 15.0% |
| !! | AATTGATTATTTGATTAAGT+TGG | + | chr7_3:86860762-86860781 | Msa1133390:intron | 15.0% |
| !!! | AACGATTTTCAAATTGAAAT+GGG | - | chr7_3:86856928-86856947 | None:intergenic | 20.0% |
| !!! | AAACGATTTTCAAATTGAAA+TGG | - | chr7_3:86856929-86856948 | None:intergenic | 20.0% |
| !! | TTTCAATTTGAAAATCGTTT+CGG | + | chr7_3:86856929-86856948 | Msa1133390:CDS | 20.0% |
| !! | TTAAGACACTTAATTCAAAA+GGG | - | chr7_3:86857147-86857166 | None:intergenic | 20.0% |
| !! | ATTAAGACACTTAATTCAAA+AGG | - | chr7_3:86857148-86857167 | None:intergenic | 20.0% |
| !! | TAAACACACTTAATTCAAAA+GGG | - | chr7_3:86857210-86857229 | None:intergenic | 20.0% |
| !! | ATAAACACACTTAATTCAAA+AGG | - | chr7_3:86857211-86857230 | None:intergenic | 20.0% |
| !!! | GTCTGTTTTTTTTTTTTGAA+TGG | - | chr7_3:86857421-86857440 | None:intergenic | 20.0% |
| !! | CTTAAGCTGAAAATAATTTA+TGG | + | chr7_3:86857526-86857545 | Msa1133390:intron | 20.0% |
| !!! | AATTTGTTTATGATAGCTTA+GGG | - | chr7_3:86857570-86857589 | None:intergenic | 20.0% |
| !! | TTAGCTTAATAGTTCAAATA+AGG | + | chr7_3:86857663-86857682 | Msa1133390:intron | 20.0% |
| !! | AAGTGTCTTTATTATATAAG+TGG | + | chr7_3:86857779-86857798 | Msa1133390:intron | 20.0% |
| !!! | TATTATTCATTAGCTTGTTA+AGG | - | chr7_3:86858304-86858323 | None:intergenic | 20.0% |
| !! | TATTTCAATTAAGATTGTAG+GGG | + | chr7_3:86858401-86858420 | Msa1133390:intron | 20.0% |
| !!! | TTAATTTTACTAGCTTATAG+CGG | - | chr7_3:86858483-86858502 | None:intergenic | 20.0% |
| !! | AAACAATAAATAAGTCTGTT+TGG | - | chr7_3:86858601-86858620 | None:intergenic | 20.0% |
| !!! | CATTTTGAAATACAATAATG+TGG | - | chr7_3:86858711-86858730 | None:intergenic | 20.0% |
| !!! | GATCAACATTTTACAATATT+AGG | - | chr7_3:86858737-86858756 | None:intergenic | 20.0% |
| !! | AATATTGTAAAATGTTGATC+AGG | + | chr7_3:86858737-86858756 | Msa1133390:intron | 20.0% |
| !! | TGTCATAAATCAAAATATCA+AGG | - | chr7_3:86858988-86859007 | None:intergenic | 20.0% |
| !! | AATTATCATTCTATCCTATT+TGG | - | chr7_3:86859226-86859245 | None:intergenic | 20.0% |
| !!! | TATTTTCTGTTGCAAATTTT+TGG | + | chr7_3:86859324-86859343 | Msa1133390:intron | 20.0% |
| !! | TAATTTATGTAATCATGTGT+TGG | - | chr7_3:86860298-86860317 | None:intergenic | 20.0% |
| !! | TAATCAATTTGAGAACAAAT+TGG | - | chr7_3:86860751-86860770 | None:intergenic | 20.0% |
| !! | TTTGGATTAATATTGTATCA+AGG | + | chr7_3:86860856-86860875 | Msa1133390:intron | 20.0% |
| !!! | AACGATTTTCAAATTGAAAT+GGG | - | chr7_3:86856928-86856947 | None:intergenic | 20.0% |
| !!! | AAACGATTTTCAAATTGAAA+TGG | - | chr7_3:86856929-86856948 | None:intergenic | 20.0% |
| !! | TTTCAATTTGAAAATCGTTT+CGG | + | chr7_3:86856929-86856948 | Msa1133390:CDS | 20.0% |
| !! | TTAAGACACTTAATTCAAAA+GGG | - | chr7_3:86857147-86857166 | None:intergenic | 20.0% |
| !! | ATTAAGACACTTAATTCAAA+AGG | - | chr7_3:86857148-86857167 | None:intergenic | 20.0% |
| !! | TAAACACACTTAATTCAAAA+GGG | - | chr7_3:86857210-86857229 | None:intergenic | 20.0% |
| !! | ATAAACACACTTAATTCAAA+AGG | - | chr7_3:86857211-86857230 | None:intergenic | 20.0% |
| !!! | GTCTGTTTTTTTTTTTTGAA+TGG | - | chr7_3:86857421-86857440 | None:intergenic | 20.0% |
| !! | CTTAAGCTGAAAATAATTTA+TGG | + | chr7_3:86857526-86857545 | Msa1133390:intron | 20.0% |
| !!! | AATTTGTTTATGATAGCTTA+GGG | - | chr7_3:86857570-86857589 | None:intergenic | 20.0% |
| !! | TTAGCTTAATAGTTCAAATA+AGG | + | chr7_3:86857663-86857682 | Msa1133390:intron | 20.0% |
| !! | AAGTGTCTTTATTATATAAG+TGG | + | chr7_3:86857779-86857798 | Msa1133390:intron | 20.0% |
| !!! | TATTATTCATTAGCTTGTTA+AGG | - | chr7_3:86858304-86858323 | None:intergenic | 20.0% |
| !! | TATTTCAATTAAGATTGTAG+GGG | + | chr7_3:86858401-86858420 | Msa1133390:intron | 20.0% |
| !!! | TTAATTTTACTAGCTTATAG+CGG | - | chr7_3:86858483-86858502 | None:intergenic | 20.0% |
| !! | AAACAATAAATAAGTCTGTT+TGG | - | chr7_3:86858601-86858620 | None:intergenic | 20.0% |
| !!! | CATTTTGAAATACAATAATG+TGG | - | chr7_3:86858711-86858730 | None:intergenic | 20.0% |
| !!! | GATCAACATTTTACAATATT+AGG | - | chr7_3:86858737-86858756 | None:intergenic | 20.0% |
| !! | AATATTGTAAAATGTTGATC+AGG | + | chr7_3:86858737-86858756 | Msa1133390:intron | 20.0% |
| !! | TGTCATAAATCAAAATATCA+AGG | - | chr7_3:86858988-86859007 | None:intergenic | 20.0% |
| !! | AATTATCATTCTATCCTATT+TGG | - | chr7_3:86859226-86859245 | None:intergenic | 20.0% |
| !!! | TATTTTCTGTTGCAAATTTT+TGG | + | chr7_3:86859324-86859343 | Msa1133390:intron | 20.0% |
| !! | TAATTTATGTAATCATGTGT+TGG | - | chr7_3:86860298-86860317 | None:intergenic | 20.0% |
| !! | TAATCAATTTGAGAACAAAT+TGG | - | chr7_3:86860751-86860770 | None:intergenic | 20.0% |
| !! | TTTGGATTAATATTGTATCA+AGG | + | chr7_3:86860856-86860875 | Msa1133390:intron | 20.0% |
| !!! | TTGATGATGAATTGAAATCT+GGG | + | chr7_3:86857006-86857025 | Msa1133390:CDS | 25.0% |
| ! | AAAAATAAGCTAACTCAAAC+AGG | - | chr7_3:86857502-86857521 | None:intergenic | 25.0% |
| ! | CTGAAAATAATTTATGGACA+TGG | + | chr7_3:86857532-86857551 | Msa1133390:intron | 25.0% |
| !! | GAATTTGTTTATGATAGCTT+AGG | - | chr7_3:86857571-86857590 | None:intergenic | 25.0% |
| !! | CTAGTAGATTAGTTCAAATA+AGG | + | chr7_3:86857604-86857623 | Msa1133390:intron | 25.0% |
| ! | TAAAGACACTTGATTCAAAA+GGG | - | chr7_3:86857770-86857789 | None:intergenic | 25.0% |
| ! | ATAAAGACACTTGATTCAAA+AGG | - | chr7_3:86857771-86857790 | None:intergenic | 25.0% |
| !! | CTAGTAGATTAGTTCAAATA+AGG | + | chr7_3:86857604-86857623 | Msa1133390:intron | 25.0% |
| !! | TTGAATTTGTTTGTAGTGTT+TGG | + | chr7_3:86858101-86858120 | Msa1133390:intron | 25.0% |
| ! | GTAGTGTTTGGTAAAATTAA+CGG | + | chr7_3:86858113-86858132 | Msa1133390:intron | 25.0% |
| ! | ACAGACTTATTTATTGTTTG+TGG | + | chr7_3:86858602-86858621 | Msa1133390:intron | 25.0% |
| ! | ACAATTTGATGAGCTAAATT+GGG | - | chr7_3:86858666-86858685 | None:intergenic | 25.0% |
| ! | TACAATTTGATGAGCTAAAT+TGG | - | chr7_3:86858667-86858686 | None:intergenic | 25.0% |
| ! | TTGAAATACAATAATGTGGA+GGG | - | chr7_3:86858707-86858726 | None:intergenic | 25.0% |
| !! | TTTGAAATACAATAATGTGG+AGG | - | chr7_3:86858708-86858727 | None:intergenic | 25.0% |
| !!! | ACATGTTGCTTTATTGTTAA+CGG | + | chr7_3:86858866-86858885 | Msa1133390:intron | 25.0% |
| !! | TGATACAGTCCTATAATTTT+AGG | + | chr7_3:86858901-86858920 | Msa1133390:intron | 25.0% |
| ! | ATTTATTTGAACGACCAAAT+AGG | + | chr7_3:86859209-86859228 | Msa1133390:intron | 25.0% |
| ! | TTCCTACTGAAAAATCTAAA+AGG | - | chr7_3:86859502-86859521 | None:intergenic | 25.0% |
| ! | ACTAATCGAAATTCAGAAAT+TGG | - | chr7_3:86859864-86859883 | None:intergenic | 25.0% |
| !! | TTCTTGTTATATGTTGAAGA+AGG | + | chr7_3:86859886-86859905 | Msa1133390:intron | 25.0% |
| ! | ATTAGAAGAAGTAAGGAAAA+TGG | - | chr7_3:86859946-86859965 | None:intergenic | 25.0% |
| ! | ATTATCTGTCATATGTAACT+AGG | + | chr7_3:86860013-86860032 | Msa1133390:intron | 25.0% |
| !! | TTTTACCGCGATAAATATAT+GGG | + | chr7_3:86860114-86860133 | Msa1133390:intron | 25.0% |
| ! | TAGACATGATAACACAAAAA+TGG | + | chr7_3:86860174-86860193 | Msa1133390:intron | 25.0% |
| ! | AACTATCATATTCTCTCTTA+GGG | - | chr7_3:86860657-86860676 | None:intergenic | 25.0% |
| ! | AAACTATCATATTCTCTCTT+AGG | - | chr7_3:86860658-86860677 | None:intergenic | 25.0% |
| !!! | TTGATGATGAATTGAAATCT+GGG | + | chr7_3:86857006-86857025 | Msa1133390:CDS | 25.0% |
| ! | AAAAATAAGCTAACTCAAAC+AGG | - | chr7_3:86857502-86857521 | None:intergenic | 25.0% |
| ! | CTGAAAATAATTTATGGACA+TGG | + | chr7_3:86857532-86857551 | Msa1133390:intron | 25.0% |
| !! | GAATTTGTTTATGATAGCTT+AGG | - | chr7_3:86857571-86857590 | None:intergenic | 25.0% |
| !! | CTAGTAGATTAGTTCAAATA+AGG | + | chr7_3:86857604-86857623 | Msa1133390:intron | 25.0% |
| ! | TAAAGACACTTGATTCAAAA+GGG | - | chr7_3:86857770-86857789 | None:intergenic | 25.0% |
| ! | ATAAAGACACTTGATTCAAA+AGG | - | chr7_3:86857771-86857790 | None:intergenic | 25.0% |
| !! | CTAGTAGATTAGTTCAAATA+AGG | + | chr7_3:86857604-86857623 | Msa1133390:intron | 25.0% |
| !! | TTGAATTTGTTTGTAGTGTT+TGG | + | chr7_3:86858101-86858120 | Msa1133390:intron | 25.0% |
| ! | GTAGTGTTTGGTAAAATTAA+CGG | + | chr7_3:86858113-86858132 | Msa1133390:intron | 25.0% |
| ! | ACAGACTTATTTATTGTTTG+TGG | + | chr7_3:86858602-86858621 | Msa1133390:intron | 25.0% |
| ! | ACAATTTGATGAGCTAAATT+GGG | - | chr7_3:86858666-86858685 | None:intergenic | 25.0% |
| ! | TACAATTTGATGAGCTAAAT+TGG | - | chr7_3:86858667-86858686 | None:intergenic | 25.0% |
| ! | TTGAAATACAATAATGTGGA+GGG | - | chr7_3:86858707-86858726 | None:intergenic | 25.0% |
| !! | TTTGAAATACAATAATGTGG+AGG | - | chr7_3:86858708-86858727 | None:intergenic | 25.0% |
| !!! | ACATGTTGCTTTATTGTTAA+CGG | + | chr7_3:86858866-86858885 | Msa1133390:intron | 25.0% |
| !! | TGATACAGTCCTATAATTTT+AGG | + | chr7_3:86858901-86858920 | Msa1133390:intron | 25.0% |
| ! | ATTTATTTGAACGACCAAAT+AGG | + | chr7_3:86859209-86859228 | Msa1133390:intron | 25.0% |
| ! | TTCCTACTGAAAAATCTAAA+AGG | - | chr7_3:86859502-86859521 | None:intergenic | 25.0% |
| ! | ACTAATCGAAATTCAGAAAT+TGG | - | chr7_3:86859864-86859883 | None:intergenic | 25.0% |
| !! | TTCTTGTTATATGTTGAAGA+AGG | + | chr7_3:86859886-86859905 | Msa1133390:intron | 25.0% |
| ! | ATTAGAAGAAGTAAGGAAAA+TGG | - | chr7_3:86859946-86859965 | None:intergenic | 25.0% |
| ! | ATTATCTGTCATATGTAACT+AGG | + | chr7_3:86860013-86860032 | Msa1133390:intron | 25.0% |
| !! | TTTTACCGCGATAAATATAT+GGG | + | chr7_3:86860114-86860133 | Msa1133390:intron | 25.0% |
| ! | TAGACATGATAACACAAAAA+TGG | + | chr7_3:86860174-86860193 | Msa1133390:intron | 25.0% |
| ! | AACTATCATATTCTCTCTTA+GGG | - | chr7_3:86860657-86860676 | None:intergenic | 25.0% |
| ! | AAACTATCATATTCTCTCTT+AGG | - | chr7_3:86860658-86860677 | None:intergenic | 25.0% |
| !! | CTTGATGATGAATTGAAATC+TGG | + | chr7_3:86857005-86857024 | Msa1133390:CDS | 30.0% |
| AAGTGTGTTTATTGTGTAAG+TGG | + | chr7_3:86857219-86857238 | Msa1133390:intron | 30.0% | |
| ! | TGTTTGGATATATGTTTTCG+TGG | + | chr7_3:86857312-86857331 | Msa1133390:intron | 30.0% |
| !! | AGTTCAAATAAGGCTTTGTT+TGG | + | chr7_3:86857614-86857633 | Msa1133390:intron | 30.0% |
| !! | AGTTCAAATAAGGCTTTGTT+TGG | + | chr7_3:86857614-86857633 | Msa1133390:intron | 30.0% |
| ! | GCTGTTTGTATAAGTTTTTG+TGG | + | chr7_3:86857870-86857889 | Msa1133390:intron | 30.0% |
| ! | AAGTTTTTGTGGAGAGTTTA+TGG | + | chr7_3:86857881-86857900 | Msa1133390:intron | 30.0% |
| !! | AGTTCAAATAAGGCTTTGTT+TGG | + | chr7_3:86857614-86857633 | Msa1133390:intron | 30.0% |
| ! | GATGATAAGTTAGCTTATAG+TGG | + | chr7_3:86858032-86858051 | Msa1133390:intron | 30.0% |
| TTTCATAAGCTCAATCCAAA+CGG | - | chr7_3:86858189-86858208 | None:intergenic | 30.0% | |
| CAAAATAAGCTCAATCCAAA+CGG | + | chr7_3:86858367-86858386 | Msa1133390:intron | 30.0% | |
| AAAATAAGCTCAATCCAAAC+GGG | + | chr7_3:86858368-86858387 | Msa1133390:intron | 30.0% | |
| ATTATAGGACTGTATCAACT+TGG | - | chr7_3:86858898-86858917 | None:intergenic | 30.0% | |
| ACTATGATAAGTTAGTTCCT+CGG | + | chr7_3:86859101-86859120 | Msa1133390:intron | 30.0% | |
| GAGAGATTGAGACTAATTTA+TGG | + | chr7_3:86859148-86859167 | Msa1133390:intron | 30.0% | |
| ATTGAGACTAATTTATGGAG+CGG | + | chr7_3:86859153-86859172 | Msa1133390:intron | 30.0% | |
| TGATTTATGAGTTTGTGCAT+TGG | + | chr7_3:86859277-86859296 | Msa1133390:intron | 30.0% | |
| TGACTTATTGATGAGTTTCT+TGG | + | chr7_3:86859347-86859366 | Msa1133390:intron | 30.0% | |
| !! | ATTGATGATGATGATGTCAT+TGG | + | chr7_3:86859425-86859444 | Msa1133390:intron | 30.0% |
| !! | TGCCTTTTAGATTTTTCAGT+AGG | + | chr7_3:86859497-86859516 | Msa1133390:intron | 30.0% |
| !! | GATTTTTCAGTAGGAATATG+CGG | + | chr7_3:86859506-86859525 | Msa1133390:intron | 30.0% |
| ! | CAAACATGCACTTAATGTTT+TGG | + | chr7_3:86859719-86859738 | Msa1133390:intron | 30.0% |
| ACTCTACAATCTAAACAAAG+TGG | - | chr7_3:86859753-86859772 | None:intergenic | 30.0% | |
| TATAATGTCATGTCTGTTGT+TGG | + | chr7_3:86859774-86859793 | Msa1133390:intron | 30.0% | |
| ! | GTATCTGATTAGTTCATCAT+TGG | - | chr7_3:86859821-86859840 | None:intergenic | 30.0% |
| GAAGTACATTAGAAGAAGTA+AGG | - | chr7_3:86859953-86859972 | None:intergenic | 30.0% | |
| TGACAGATAATGTCAACTAA+GGG | - | chr7_3:86860004-86860023 | None:intergenic | 30.0% | |
| ATGACAGATAATGTCAACTA+AGG | - | chr7_3:86860005-86860024 | None:intergenic | 30.0% | |
| TATGTAACTAGGACAAAACT+TGG | + | chr7_3:86860024-86860043 | Msa1133390:intron | 30.0% | |
| ATGTAACTAGGACAAAACTT+GGG | + | chr7_3:86860025-86860044 | Msa1133390:intron | 30.0% | |
| ATATTTATCGCGGTAAAACT+TGG | - | chr7_3:86860112-86860131 | None:intergenic | 30.0% | |
| ! | GTTTTACCGCGATAAATATA+TGG | + | chr7_3:86860113-86860132 | Msa1133390:intron | 30.0% |
| ! | CAATAGATTAAGGGTTTGTT+TGG | + | chr7_3:86860435-86860454 | Msa1133390:intron | 30.0% |
| !!! | GTTTGCTTCTTTTTTTAACC+AGG | + | chr7_3:86860803-86860822 | Msa1133390:intron | 30.0% |
| CCAAAATAAATCACTTTGAC+CGG | - | chr7_3:86860841-86860860 | None:intergenic | 30.0% | |
| !! | CTTGATGATGAATTGAAATC+TGG | + | chr7_3:86857005-86857024 | Msa1133390:CDS | 30.0% |
| AAGTGTGTTTATTGTGTAAG+TGG | + | chr7_3:86857219-86857238 | Msa1133390:intron | 30.0% | |
| ! | TGTTTGGATATATGTTTTCG+TGG | + | chr7_3:86857312-86857331 | Msa1133390:intron | 30.0% |
| !! | AGTTCAAATAAGGCTTTGTT+TGG | + | chr7_3:86857614-86857633 | Msa1133390:intron | 30.0% |
| !! | AGTTCAAATAAGGCTTTGTT+TGG | + | chr7_3:86857614-86857633 | Msa1133390:intron | 30.0% |
| ! | GCTGTTTGTATAAGTTTTTG+TGG | + | chr7_3:86857870-86857889 | Msa1133390:intron | 30.0% |
| ! | AAGTTTTTGTGGAGAGTTTA+TGG | + | chr7_3:86857881-86857900 | Msa1133390:intron | 30.0% |
| !! | AGTTCAAATAAGGCTTTGTT+TGG | + | chr7_3:86857614-86857633 | Msa1133390:intron | 30.0% |
| ! | GATGATAAGTTAGCTTATAG+TGG | + | chr7_3:86858032-86858051 | Msa1133390:intron | 30.0% |
| TTTCATAAGCTCAATCCAAA+CGG | - | chr7_3:86858189-86858208 | None:intergenic | 30.0% | |
| CAAAATAAGCTCAATCCAAA+CGG | + | chr7_3:86858367-86858386 | Msa1133390:intron | 30.0% | |
| AAAATAAGCTCAATCCAAAC+GGG | + | chr7_3:86858368-86858387 | Msa1133390:intron | 30.0% | |
| ATTATAGGACTGTATCAACT+TGG | - | chr7_3:86858898-86858917 | None:intergenic | 30.0% | |
| ACTATGATAAGTTAGTTCCT+CGG | + | chr7_3:86859101-86859120 | Msa1133390:intron | 30.0% | |
| GAGAGATTGAGACTAATTTA+TGG | + | chr7_3:86859148-86859167 | Msa1133390:intron | 30.0% | |
| ATTGAGACTAATTTATGGAG+CGG | + | chr7_3:86859153-86859172 | Msa1133390:intron | 30.0% | |
| TGATTTATGAGTTTGTGCAT+TGG | + | chr7_3:86859277-86859296 | Msa1133390:intron | 30.0% | |
| TGACTTATTGATGAGTTTCT+TGG | + | chr7_3:86859347-86859366 | Msa1133390:intron | 30.0% | |
| !! | ATTGATGATGATGATGTCAT+TGG | + | chr7_3:86859425-86859444 | Msa1133390:intron | 30.0% |
| !! | TGCCTTTTAGATTTTTCAGT+AGG | + | chr7_3:86859497-86859516 | Msa1133390:intron | 30.0% |
| !! | GATTTTTCAGTAGGAATATG+CGG | + | chr7_3:86859506-86859525 | Msa1133390:intron | 30.0% |
| ! | CAAACATGCACTTAATGTTT+TGG | + | chr7_3:86859719-86859738 | Msa1133390:intron | 30.0% |
| ACTCTACAATCTAAACAAAG+TGG | - | chr7_3:86859753-86859772 | None:intergenic | 30.0% | |
| TATAATGTCATGTCTGTTGT+TGG | + | chr7_3:86859774-86859793 | Msa1133390:intron | 30.0% | |
| ! | GTATCTGATTAGTTCATCAT+TGG | - | chr7_3:86859821-86859840 | None:intergenic | 30.0% |
| GAAGTACATTAGAAGAAGTA+AGG | - | chr7_3:86859953-86859972 | None:intergenic | 30.0% | |
| TGACAGATAATGTCAACTAA+GGG | - | chr7_3:86860004-86860023 | None:intergenic | 30.0% | |
| ATGACAGATAATGTCAACTA+AGG | - | chr7_3:86860005-86860024 | None:intergenic | 30.0% | |
| TATGTAACTAGGACAAAACT+TGG | + | chr7_3:86860024-86860043 | Msa1133390:intron | 30.0% | |
| ATGTAACTAGGACAAAACTT+GGG | + | chr7_3:86860025-86860044 | Msa1133390:intron | 30.0% | |
| ATATTTATCGCGGTAAAACT+TGG | - | chr7_3:86860112-86860131 | None:intergenic | 30.0% | |
| ! | GTTTTACCGCGATAAATATA+TGG | + | chr7_3:86860113-86860132 | Msa1133390:intron | 30.0% |
| ! | CAATAGATTAAGGGTTTGTT+TGG | + | chr7_3:86860435-86860454 | Msa1133390:intron | 30.0% |
| !!! | GTTTGCTTCTTTTTTTAACC+AGG | + | chr7_3:86860803-86860822 | Msa1133390:intron | 30.0% |
| CCAAAATAAATCACTTTGAC+CGG | - | chr7_3:86860841-86860860 | None:intergenic | 30.0% | |
| !!! | TTGGAGTTTTGTTTGGATTC+TGG | - | chr7_3:86856814-86856833 | None:intergenic | 35.0% |
| TCTTGTTAAACGACATCGTA+TGG | + | chr7_3:86856971-86856990 | Msa1133390:CDS | 35.0% | |
| ACTTCAGGGTTAATTTCCTT+CGG | - | chr7_3:86857062-86857081 | None:intergenic | 35.0% | |
| AACCCTGAAGTGAAATGATA+CGG | + | chr7_3:86857071-86857090 | Msa1133390:intron | 35.0% | |
| CATGTAATCTGTAAGCTGTT+TGG | + | chr7_3:86857296-86857315 | Msa1133390:intron | 35.0% | |
| ! | ATGTTTTCGTGGAGAGATTA+TGG | + | chr7_3:86857323-86857342 | Msa1133390:intron | 35.0% |
| AGGCAATAAGTCTGTTTGAT+TGG | - | chr7_3:86857482-86857501 | None:intergenic | 35.0% | |
| ACAAACAGCTTACAGATTAC+AGG | - | chr7_3:86857859-86857878 | None:intergenic | 35.0% | |
| ATTAATATTTAGGCCCCGTT+TGG | + | chr7_3:86858171-86858190 | Msa1133390:intron | 35.0% | |
| TTCATAAGCTCAATCCAAAC+GGG | - | chr7_3:86858188-86858207 | None:intergenic | 35.0% | |
| AATAAAATTAAGGGCCCGTT+TGG | - | chr7_3:86858385-86858404 | None:intergenic | 35.0% | |
| GTTCAGATTTGTACTTCTGT+TGG | - | chr7_3:86858835-86858854 | None:intergenic | 35.0% | |
| !! | TGTTGCTTTATTGTTAACGG+AGG | + | chr7_3:86858869-86858888 | Msa1133390:intron | 35.0% |
| ! | GTTGCTTTATTGTTAACGGA+GGG | + | chr7_3:86858870-86858889 | Msa1133390:intron | 35.0% |
| ! | TTGCTTTATTGTTAACGGAG+GGG | + | chr7_3:86858871-86858890 | Msa1133390:intron | 35.0% |
| TCAAGTTAGACTCTGAACTA+TGG | - | chr7_3:86859130-86859149 | None:intergenic | 35.0% | |
| !!! | GGTTTTAAGCATAGTAGTAC+TGG | + | chr7_3:86859446-86859465 | Msa1133390:intron | 35.0% |
| ATGAGAAGAGCTTCTCATAT+TGG | + | chr7_3:86859472-86859491 | Msa1133390:intron | 35.0% | |
| GAAATGAAACTCATCCTGTT+TGG | - | chr7_3:86859538-86859557 | None:intergenic | 35.0% | |
| !!! | TAGGGATGCTGTTTAGTTTT+TGG | + | chr7_3:86859564-86859583 | Msa1133390:intron | 35.0% |
| !! | TAAGTGCATGTTTGCTTTTG+CGG | - | chr7_3:86859713-86859732 | None:intergenic | 35.0% |
| ! | GGAACGATAGAAAAGTTTTG+TGG | - | chr7_3:86859843-86859862 | None:intergenic | 35.0% |
| CTTCTTCTAATGTACTTCAG+AGG | + | chr7_3:86859955-86859974 | Msa1133390:intron | 35.0% | |
| TGTAACTAGGACAAAACTTG+GGG | + | chr7_3:86860026-86860045 | Msa1133390:intron | 35.0% | |
| CTTGTCCCATATATTTATCG+CGG | - | chr7_3:86860122-86860141 | None:intergenic | 35.0% | |
| TAGAGTGTGATCTATGAAGA+AGG | + | chr7_3:86860214-86860233 | Msa1133390:intron | 35.0% | |
| AGTGTGGTAGATTGTAAGTT+TGG | + | chr7_3:86860370-86860389 | Msa1133390:intron | 35.0% | |
| GTGGAGTGACAATAGATTAA+GGG | + | chr7_3:86860426-86860445 | Msa1133390:intron | 35.0% | |
| AGTGCTAAACAACACTACAA+GGG | - | chr7_3:86860721-86860740 | None:intergenic | 35.0% | |
| TAGTGCTAAACAACACTACA+AGG | - | chr7_3:86860722-86860741 | None:intergenic | 35.0% | |
| AACCAGGTTATTGTAGTAAC+CGG | + | chr7_3:86860819-86860838 | Msa1133390:intron | 35.0% | |
| ! | CCGGTCAAAGTGATTTATTT+TGG | + | chr7_3:86860838-86860857 | Msa1133390:intron | 35.0% |
| !!! | TTGGAGTTTTGTTTGGATTC+TGG | - | chr7_3:86856814-86856833 | None:intergenic | 35.0% |
| TCTTGTTAAACGACATCGTA+TGG | + | chr7_3:86856971-86856990 | Msa1133390:CDS | 35.0% | |
| ACTTCAGGGTTAATTTCCTT+CGG | - | chr7_3:86857062-86857081 | None:intergenic | 35.0% | |
| AACCCTGAAGTGAAATGATA+CGG | + | chr7_3:86857071-86857090 | Msa1133390:intron | 35.0% | |
| CATGTAATCTGTAAGCTGTT+TGG | + | chr7_3:86857296-86857315 | Msa1133390:intron | 35.0% | |
| ! | ATGTTTTCGTGGAGAGATTA+TGG | + | chr7_3:86857323-86857342 | Msa1133390:intron | 35.0% |
| AGGCAATAAGTCTGTTTGAT+TGG | - | chr7_3:86857482-86857501 | None:intergenic | 35.0% | |
| ACAAACAGCTTACAGATTAC+AGG | - | chr7_3:86857859-86857878 | None:intergenic | 35.0% | |
| ATTAATATTTAGGCCCCGTT+TGG | + | chr7_3:86858171-86858190 | Msa1133390:intron | 35.0% | |
| TTCATAAGCTCAATCCAAAC+GGG | - | chr7_3:86858188-86858207 | None:intergenic | 35.0% | |
| AATAAAATTAAGGGCCCGTT+TGG | - | chr7_3:86858385-86858404 | None:intergenic | 35.0% | |
| GTTCAGATTTGTACTTCTGT+TGG | - | chr7_3:86858835-86858854 | None:intergenic | 35.0% | |
| !! | TGTTGCTTTATTGTTAACGG+AGG | + | chr7_3:86858869-86858888 | Msa1133390:intron | 35.0% |
| ! | GTTGCTTTATTGTTAACGGA+GGG | + | chr7_3:86858870-86858889 | Msa1133390:intron | 35.0% |
| ! | TTGCTTTATTGTTAACGGAG+GGG | + | chr7_3:86858871-86858890 | Msa1133390:intron | 35.0% |
| TCAAGTTAGACTCTGAACTA+TGG | - | chr7_3:86859130-86859149 | None:intergenic | 35.0% | |
| !!! | GGTTTTAAGCATAGTAGTAC+TGG | + | chr7_3:86859446-86859465 | Msa1133390:intron | 35.0% |
| ATGAGAAGAGCTTCTCATAT+TGG | + | chr7_3:86859472-86859491 | Msa1133390:intron | 35.0% | |
| GAAATGAAACTCATCCTGTT+TGG | - | chr7_3:86859538-86859557 | None:intergenic | 35.0% | |
| !!! | TAGGGATGCTGTTTAGTTTT+TGG | + | chr7_3:86859564-86859583 | Msa1133390:intron | 35.0% |
| !! | TAAGTGCATGTTTGCTTTTG+CGG | - | chr7_3:86859713-86859732 | None:intergenic | 35.0% |
| ! | GGAACGATAGAAAAGTTTTG+TGG | - | chr7_3:86859843-86859862 | None:intergenic | 35.0% |
| CTTCTTCTAATGTACTTCAG+AGG | + | chr7_3:86859955-86859974 | Msa1133390:intron | 35.0% | |
| TGTAACTAGGACAAAACTTG+GGG | + | chr7_3:86860026-86860045 | Msa1133390:intron | 35.0% | |
| CTTGTCCCATATATTTATCG+CGG | - | chr7_3:86860122-86860141 | None:intergenic | 35.0% | |
| TAGAGTGTGATCTATGAAGA+AGG | + | chr7_3:86860214-86860233 | Msa1133390:intron | 35.0% | |
| AGTGTGGTAGATTGTAAGTT+TGG | + | chr7_3:86860370-86860389 | Msa1133390:intron | 35.0% | |
| GTGGAGTGACAATAGATTAA+GGG | + | chr7_3:86860426-86860445 | Msa1133390:intron | 35.0% | |
| AGTGCTAAACAACACTACAA+GGG | - | chr7_3:86860721-86860740 | None:intergenic | 35.0% | |
| TAGTGCTAAACAACACTACA+AGG | - | chr7_3:86860722-86860741 | None:intergenic | 35.0% | |
| AACCAGGTTATTGTAGTAAC+CGG | + | chr7_3:86860819-86860838 | Msa1133390:intron | 35.0% | |
| ! | CCGGTCAAAGTGATTTATTT+TGG | + | chr7_3:86860838-86860857 | Msa1133390:intron | 35.0% |
| !!! | GAGTTTTGTTTGGATTCTGG+TGG | - | chr7_3:86856811-86856830 | None:intergenic | 40.0% |
| !!! | GGGATGATTGGAGTTTTGTT+TGG | - | chr7_3:86856821-86856840 | None:intergenic | 40.0% |
| ATCGTTTCGGAGAAATTCGA+AGG | + | chr7_3:86856942-86856961 | Msa1133390:CDS | 40.0% | |
| CACCGTATCATTTCACTTCA+GGG | - | chr7_3:86857076-86857095 | None:intergenic | 40.0% | |
| ! | TGAAATGATACGGTGCGTTT+TGG | + | chr7_3:86857081-86857100 | Msa1133390:intron | 40.0% |
| TCATAAGCTCAATCCAAACG+GGG | - | chr7_3:86858187-86858206 | None:intergenic | 40.0% | |
| ! | GCTTTAAGTTCGTGAGAATG+TGG | + | chr7_3:86858503-86858522 | Msa1133390:intron | 40.0% |
| TTAAGTTCGTGAGAATGTGG+CGG | + | chr7_3:86858506-86858525 | Msa1133390:intron | 40.0% | |
| CGGAGACTATAATGACATTG+AGG | - | chr7_3:86858806-86858825 | None:intergenic | 40.0% | |
| TGTACTTCTGTTGGCAATTG+CGG | - | chr7_3:86858826-86858845 | None:intergenic | 40.0% | |
| ATGAAACTCATCCTGTTTGG+AGG | - | chr7_3:86859535-86859554 | None:intergenic | 40.0% | |
| ACAGGATGAGTTTCATTTCC+TGG | + | chr7_3:86859539-86859558 | Msa1133390:intron | 40.0% | |
| CAGGATGAGTTTCATTTCCT+GGG | + | chr7_3:86859540-86859559 | Msa1133390:intron | 40.0% | |
| ! | TCTGTTGTTGGTATTGAGTC+TGG | + | chr7_3:86859786-86859805 | Msa1133390:intron | 40.0% |
| ! | TGTTGAAGAAGGTAGTTCTG+AGG | + | chr7_3:86859897-86859916 | Msa1133390:intron | 40.0% |
| TGTCTGTGCTTCATATAGTG+TGG | + | chr7_3:86860354-86860373 | Msa1133390:intron | 40.0% | |
| GGTGGAGTGACAATAGATTA+AGG | + | chr7_3:86860425-86860444 | Msa1133390:intron | 40.0% | |
| ATATCCCGACTCTCTTATCT+TGG | + | chr7_3:86860683-86860702 | Msa1133390:intron | 40.0% | |
| !!! | GAGTTTTGTTTGGATTCTGG+TGG | - | chr7_3:86856811-86856830 | None:intergenic | 40.0% |
| !!! | GGGATGATTGGAGTTTTGTT+TGG | - | chr7_3:86856821-86856840 | None:intergenic | 40.0% |
| ATCGTTTCGGAGAAATTCGA+AGG | + | chr7_3:86856942-86856961 | Msa1133390:CDS | 40.0% | |
| CACCGTATCATTTCACTTCA+GGG | - | chr7_3:86857076-86857095 | None:intergenic | 40.0% | |
| ! | TGAAATGATACGGTGCGTTT+TGG | + | chr7_3:86857081-86857100 | Msa1133390:intron | 40.0% |
| TCATAAGCTCAATCCAAACG+GGG | - | chr7_3:86858187-86858206 | None:intergenic | 40.0% | |
| ! | GCTTTAAGTTCGTGAGAATG+TGG | + | chr7_3:86858503-86858522 | Msa1133390:intron | 40.0% |
| TTAAGTTCGTGAGAATGTGG+CGG | + | chr7_3:86858506-86858525 | Msa1133390:intron | 40.0% | |
| CGGAGACTATAATGACATTG+AGG | - | chr7_3:86858806-86858825 | None:intergenic | 40.0% | |
| TGTACTTCTGTTGGCAATTG+CGG | - | chr7_3:86858826-86858845 | None:intergenic | 40.0% | |
| ATGAAACTCATCCTGTTTGG+AGG | - | chr7_3:86859535-86859554 | None:intergenic | 40.0% | |
| ACAGGATGAGTTTCATTTCC+TGG | + | chr7_3:86859539-86859558 | Msa1133390:intron | 40.0% | |
| CAGGATGAGTTTCATTTCCT+GGG | + | chr7_3:86859540-86859559 | Msa1133390:intron | 40.0% | |
| ! | TCTGTTGTTGGTATTGAGTC+TGG | + | chr7_3:86859786-86859805 | Msa1133390:intron | 40.0% |
| ! | TGTTGAAGAAGGTAGTTCTG+AGG | + | chr7_3:86859897-86859916 | Msa1133390:intron | 40.0% |
| TGTCTGTGCTTCATATAGTG+TGG | + | chr7_3:86860354-86860373 | Msa1133390:intron | 40.0% | |
| GGTGGAGTGACAATAGATTA+AGG | + | chr7_3:86860425-86860444 | Msa1133390:intron | 40.0% | |
| ATATCCCGACTCTCTTATCT+TGG | + | chr7_3:86860683-86860702 | Msa1133390:intron | 40.0% | |
| !! | CACGTCGTCTAGCTCTATAA+GGG | - | chr7_3:86856853-86856872 | None:intergenic | 45.0% |
| !! | ACACGTCGTCTAGCTCTATA+AGG | - | chr7_3:86856854-86856873 | None:intergenic | 45.0% |
| GCTTCATGCTCTTTCCATTG+TGG | + | chr7_3:86857028-86857047 | Msa1133390:CDS | 45.0% | |
| GCACCGTATCATTTCACTTC+AGG | - | chr7_3:86857077-86857096 | None:intergenic | 45.0% | |
| CTCTCCTAAACAGACTCACA+AGG | + | chr7_3:86857395-86857414 | Msa1133390:intron | 45.0% | |
| !! | ATGGCCTTGTGAGTCTGTTT+AGG | - | chr7_3:86857402-86857421 | None:intergenic | 45.0% |
| TGTGGAGGGCTAAGTTCATA+AGG | - | chr7_3:86858693-86858712 | None:intergenic | 45.0% | |
| TGAGTTTCATTTCCTGGGCT+AGG | + | chr7_3:86859545-86859564 | Msa1133390:intron | 45.0% | |
| GAGTTTCATTTCCTGGGCTA+GGG | + | chr7_3:86859546-86859565 | Msa1133390:intron | 45.0% | |
| CTTCTGAGTTCACTTTGCCT+CGG | + | chr7_3:86859665-86859684 | Msa1133390:intron | 45.0% | |
| TTCTGAGTTCACTTTGCCTC+GGG | + | chr7_3:86859666-86859685 | Msa1133390:intron | 45.0% | |
| !! | TCTATGAAGAAGGTACTCCC+CGG | + | chr7_3:86860224-86860243 | Msa1133390:intron | 45.0% |
| ATTCTCTCTTAGGGCTCGTT+TGG | - | chr7_3:86860648-86860667 | None:intergenic | 45.0% | |
| GTGACCAAGATAAGAGAGTC+GGG | - | chr7_3:86860690-86860709 | None:intergenic | 45.0% | |
| CGTGACCAAGATAAGAGAGT+CGG | - | chr7_3:86860691-86860710 | None:intergenic | 45.0% | |
| GACCGGTTACTACAATAACC+TGG | - | chr7_3:86860824-86860843 | None:intergenic | 45.0% | |
| !! | CACGTCGTCTAGCTCTATAA+GGG | - | chr7_3:86856853-86856872 | None:intergenic | 45.0% |
| !! | ACACGTCGTCTAGCTCTATA+AGG | - | chr7_3:86856854-86856873 | None:intergenic | 45.0% |
| GCTTCATGCTCTTTCCATTG+TGG | + | chr7_3:86857028-86857047 | Msa1133390:CDS | 45.0% | |
| GCACCGTATCATTTCACTTC+AGG | - | chr7_3:86857077-86857096 | None:intergenic | 45.0% | |
| CTCTCCTAAACAGACTCACA+AGG | + | chr7_3:86857395-86857414 | Msa1133390:intron | 45.0% | |
| !! | ATGGCCTTGTGAGTCTGTTT+AGG | - | chr7_3:86857402-86857421 | None:intergenic | 45.0% |
| TGTGGAGGGCTAAGTTCATA+AGG | - | chr7_3:86858693-86858712 | None:intergenic | 45.0% | |
| TGAGTTTCATTTCCTGGGCT+AGG | + | chr7_3:86859545-86859564 | Msa1133390:intron | 45.0% | |
| GAGTTTCATTTCCTGGGCTA+GGG | + | chr7_3:86859546-86859565 | Msa1133390:intron | 45.0% | |
| CTTCTGAGTTCACTTTGCCT+CGG | + | chr7_3:86859665-86859684 | Msa1133390:intron | 45.0% | |
| TTCTGAGTTCACTTTGCCTC+GGG | + | chr7_3:86859666-86859685 | Msa1133390:intron | 45.0% | |
| !! | TCTATGAAGAAGGTACTCCC+CGG | + | chr7_3:86860224-86860243 | Msa1133390:intron | 45.0% |
| ATTCTCTCTTAGGGCTCGTT+TGG | - | chr7_3:86860648-86860667 | None:intergenic | 45.0% | |
| GTGACCAAGATAAGAGAGTC+GGG | - | chr7_3:86860690-86860709 | None:intergenic | 45.0% | |
| CGTGACCAAGATAAGAGAGT+CGG | - | chr7_3:86860691-86860710 | None:intergenic | 45.0% | |
| GACCGGTTACTACAATAACC+TGG | - | chr7_3:86860824-86860843 | None:intergenic | 45.0% | |
| !! | GTCTAGCTCTATAAGGGTGG+CGG | - | chr7_3:86856847-86856866 | None:intergenic | 50.0% |
| !! | GTCGTCTAGCTCTATAAGGG+TGG | - | chr7_3:86856850-86856869 | None:intergenic | 50.0% |
| ACTCTGAACTATGGCTACCG+AGG | - | chr7_3:86859121-86859140 | None:intergenic | 50.0% | |
| ATATGCGGCTTCCTCCAAAC+AGG | + | chr7_3:86859521-86859540 | Msa1133390:intron | 50.0% | |
| !! | CTATGAAGAAGGTACTCCCC+GGG | + | chr7_3:86860225-86860244 | Msa1133390:intron | 50.0% |
| ACATATCCGACACCGTAACC+CGG | - | chr7_3:86860246-86860265 | None:intergenic | 50.0% | |
| CGACTCCACACTAGAAACGT+TGG | + | chr7_3:86860404-86860423 | Msa1133390:intron | 50.0% | |
| CTCCACACTAGAAACGTTGG+TGG | + | chr7_3:86860407-86860426 | Msa1133390:intron | 50.0% | |
| !! | CTCCACCAACGTTTCTAGTG+TGG | - | chr7_3:86860412-86860431 | None:intergenic | 50.0% |
| !! | GTCTAGCTCTATAAGGGTGG+CGG | - | chr7_3:86856847-86856866 | None:intergenic | 50.0% |
| !! | GTCGTCTAGCTCTATAAGGG+TGG | - | chr7_3:86856850-86856869 | None:intergenic | 50.0% |
| ACTCTGAACTATGGCTACCG+AGG | - | chr7_3:86859121-86859140 | None:intergenic | 50.0% | |
| ATATGCGGCTTCCTCCAAAC+AGG | + | chr7_3:86859521-86859540 | Msa1133390:intron | 50.0% | |
| !! | CTATGAAGAAGGTACTCCCC+GGG | + | chr7_3:86860225-86860244 | Msa1133390:intron | 50.0% |
| ACATATCCGACACCGTAACC+CGG | - | chr7_3:86860246-86860265 | None:intergenic | 50.0% | |
| CGACTCCACACTAGAAACGT+TGG | + | chr7_3:86860404-86860423 | Msa1133390:intron | 50.0% | |
| CTCCACACTAGAAACGTTGG+TGG | + | chr7_3:86860407-86860426 | Msa1133390:intron | 50.0% | |
| !! | CTCCACCAACGTTTCTAGTG+TGG | - | chr7_3:86860412-86860431 | None:intergenic | 50.0% |
| !! | CTCTATAAGGGTGGCGGAGA+GGG | - | chr7_3:86856841-86856860 | None:intergenic | 55.0% |
| GACGTGTCGTATCAACACGC+AGG | + | chr7_3:86856867-86856886 | Msa1133390:intron | 55.0% | |
| ! | CTTCGGCGTTTTCGCCACAA+TGG | - | chr7_3:86857045-86857064 | None:intergenic | 55.0% |
| CATTGTGGCGAAAACGCCGA+AGG | + | chr7_3:86857043-86857062 | Msa1133390:CDS | 55.0% | |
| AGAATGTGGCGGTTGCGAAG+CGG | + | chr7_3:86858517-86858536 | Msa1133390:intron | 55.0% | |
| CTAAACAGCATCCCTAGCCC+AGG | - | chr7_3:86859560-86859579 | None:intergenic | 55.0% | |
| !! | AGAAGGTACTCCCCGGGTTA+CGG | + | chr7_3:86860231-86860250 | Msa1133390:intron | 55.0% |
| ATATCCGACACCGTAACCCG+GGG | - | chr7_3:86860244-86860263 | None:intergenic | 55.0% | |
| CATATCCGACACCGTAACCC+GGG | - | chr7_3:86860245-86860264 | None:intergenic | 55.0% | |
| !! | GTGTTGGTGTCGTGTCGTGT+CGG | - | chr7_3:86860282-86860301 | None:intergenic | 55.0% |
| !! | CTCTATAAGGGTGGCGGAGA+GGG | - | chr7_3:86856841-86856860 | None:intergenic | 55.0% |
| GACGTGTCGTATCAACACGC+AGG | + | chr7_3:86856867-86856886 | Msa1133390:intron | 55.0% | |
| ! | CTTCGGCGTTTTCGCCACAA+TGG | - | chr7_3:86857045-86857064 | None:intergenic | 55.0% |
| CATTGTGGCGAAAACGCCGA+AGG | + | chr7_3:86857043-86857062 | Msa1133390:CDS | 55.0% | |
| AGAATGTGGCGGTTGCGAAG+CGG | + | chr7_3:86858517-86858536 | Msa1133390:intron | 55.0% | |
| CTAAACAGCATCCCTAGCCC+AGG | - | chr7_3:86859560-86859579 | None:intergenic | 55.0% | |
| !! | AGAAGGTACTCCCCGGGTTA+CGG | + | chr7_3:86860231-86860250 | Msa1133390:intron | 55.0% |
| ATATCCGACACCGTAACCCG+GGG | - | chr7_3:86860244-86860263 | None:intergenic | 55.0% | |
| CATATCCGACACCGTAACCC+GGG | - | chr7_3:86860245-86860264 | None:intergenic | 55.0% | |
| !! | GTGTTGGTGTCGTGTCGTGT+CGG | - | chr7_3:86860282-86860301 | None:intergenic | 55.0% |
| !! | GCTCTATAAGGGTGGCGGAG+AGG | - | chr7_3:86856842-86856861 | None:intergenic | 60.0% |
| GAATGTGGCGGTTGCGAAGC+GGG | + | chr7_3:86858518-86858537 | Msa1133390:intron | 60.0% | |
| TGTTGTGTTCTCGCGTCCCG+AGG | - | chr7_3:86859685-86859704 | None:intergenic | 60.0% | |
| TACTCCCCGGGTTACGGTGT+CGG | + | chr7_3:86860237-86860256 | Msa1133390:intron | 60.0% | |
| ! | GTGTCGTGTCGTGTCGGTGT+TGG | - | chr7_3:86860276-86860295 | None:intergenic | 60.0% |
| !! | GCTCTATAAGGGTGGCGGAG+AGG | - | chr7_3:86856842-86856861 | None:intergenic | 60.0% |
| GAATGTGGCGGTTGCGAAGC+GGG | + | chr7_3:86858518-86858537 | Msa1133390:intron | 60.0% | |
| TGTTGTGTTCTCGCGTCCCG+AGG | - | chr7_3:86859685-86859704 | None:intergenic | 60.0% | |
| TACTCCCCGGGTTACGGTGT+CGG | + | chr7_3:86860237-86860256 | Msa1133390:intron | 60.0% | |
| ! | GTGTCGTGTCGTGTCGGTGT+TGG | - | chr7_3:86860276-86860295 | None:intergenic | 60.0% |
| !! | GGGTGGCGGAGAGGGATGAT+TGG | - | chr7_3:86856833-86856852 | None:intergenic | 65.0% |
| !! | GGGTGGCGGAGAGGGATGAT+TGG | - | chr7_3:86856833-86856852 | None:intergenic | 65.0% |
| GGCGCGTGAGAGCAGTGTGG+TGG | - | chr7_3:86856790-86856809 | None:intergenic | 70.0% | |
| GGTGGCGCGTGAGAGCAGTG+TGG | - | chr7_3:86856793-86856812 | None:intergenic | 70.0% | |
| GGCGCGTGAGAGCAGTGTGG+TGG | - | chr7_3:86856790-86856809 | None:intergenic | 70.0% | |
| GGTGGCGCGTGAGAGCAGTG+TGG | - | chr7_3:86856793-86856812 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 86856785 | 86860886 | 86856785 | ID=Msa1133390;Name=Msa1133390 |
| chr7_3 | mRNA | 86856785 | 86860886 | 86856785 | ID=Msa1133390-mRNA-1;Parent=Msa1133390;Name=Msa1133390-mRNA-1;_AED=0.31;_eAED=0.51;_QI=0|0|0|1|0|0|4|0|97 |
| chr7_3 | exon | 86856785 | 86856869 | 86856785 | ID=Msa1133390-mRNA-1:exon:26087;Parent=Msa1133390-mRNA-1 |
| chr7_3 | exon | 86856889 | 86857079 | 86856889 | ID=Msa1133390-mRNA-1:exon:26088;Parent=Msa1133390-mRNA-1 |
| chr7_3 | exon | 86860825 | 86860830 | 86860825 | ID=Msa1133390-mRNA-1:exon:26089;Parent=Msa1133390-mRNA-1 |
| chr7_3 | exon | 86860878 | 86860886 | 86860878 | ID=Msa1133390-mRNA-1:exon:26090;Parent=Msa1133390-mRNA-1 |
| chr7_3 | CDS | 86856785 | 86856869 | 86856785 | ID=Msa1133390-mRNA-1:cds;Parent=Msa1133390-mRNA-1 |
| chr7_3 | CDS | 86856889 | 86857079 | 86856889 | ID=Msa1133390-mRNA-1:cds;Parent=Msa1133390-mRNA-1 |
| chr7_3 | CDS | 86860825 | 86860830 | 86860825 | ID=Msa1133390-mRNA-1:cds;Parent=Msa1133390-mRNA-1 |
| chr7_3 | CDS | 86860878 | 86860886 | 86860878 | ID=Msa1133390-mRNA-1:cds;Parent=Msa1133390-mRNA-1 |
| Gene Sequence |
| Protein sequence |
