Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0896200 | XP_013452778.1 | 95.660 | 530 | 14 | 1 | 1 | 521 | 1 | 530 | 0.0 | 1044 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0896200 | sp|Q500V9|DPB2_ARATH | 65.698 | 516 | 160 | 6 | 16 | 521 | 18 | 526 | 0.0 | 687 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0896200 | A0A072UBG5 | 95.660 | 530 | 14 | 1 | 1 | 521 | 1 | 530 | 0.0 | 1044 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0468620 | Msa0896200 | 0.801521 | 8.660092e-49 | -8.615850e-47 |
| Msa0896200 | Msa0928890 | 0.924071 | 1.148912e-89 | -8.615850e-47 |
| Msa0896200 | Msa1116660 | 0.805241 | 1.468079e-49 | -8.615850e-47 |
| Msa0896200 | Msa1454010 | 0.805053 | 1.606918e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0896200 | MtrunA17_Chr6g0480601 | 99.000 | 300 | 3 | 0 | 222 | 521 | 1 | 300 | 0.0 | 623 |
| Msa0896200 | MtrunA17_Chr6g0480611 | 94.146 | 205 | 12 | 0 | 1 | 205 | 1 | 205 | 1.19e-128 | 374 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0896200 | AT5G22110.1 | 65.698 | 516 | 160 | 6 | 16 | 521 | 18 | 526 | 0.0 | 687 |
| Msa0896200 | AT5G22110.2 | 63.711 | 485 | 159 | 6 | 16 | 490 | 18 | 495 | 0.0 | 626 |
Find 139 sgRNAs with CRISPR-Local
Find 389 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGTTGAGTTTGGGTGATTTA+AGG | 0.184882 | 6_1:+85929075 | None:intergenic |
| TTGTCATACTATCTGATATT+TGG | 0.210691 | 6_1:-85924398 | Msa0896200:CDS |
| TGGCATCGGAAATATAATTT+TGG | 0.212497 | 6_1:+85923731 | None:intergenic |
| TGATAGACTACAGTTATTAT+TGG | 0.240711 | 6_1:-85922575 | Msa0896200:three_prime_UTR |
| GCAAGGATTGCTTGAAAATA+TGG | 0.243955 | 6_1:+85923711 | None:intergenic |
| TTGATATGCAGGTCGCAATT+TGG | 0.292232 | 6_1:-85923968 | Msa0896200:intron |
| TTCTTCGTAGAGAAGACTTT+TGG | 0.304181 | 6_1:-85924279 | Msa0896200:intron |
| TTGACATCTCTTAGTAAATC+AGG | 0.313336 | 6_1:+85922534 | None:intergenic |
| ATGGGTTGTTGTTTAGTTAG+AGG | 0.330528 | 6_1:+85923316 | None:intergenic |
| CCAAGACGAGGTAAGCTTCC+TGG | 0.339283 | 6_1:+85926623 | None:intergenic |
| AGTCCGAACTTTCACAATTC+CGG | 0.347807 | 6_1:-85926505 | Msa0896200:CDS |
| GTGAAAATTGTTAGTATAGT+AGG | 0.353134 | 6_1:-85922673 | Msa0896200:three_prime_UTR |
| AGGATTTCGTCAAGTGCTTC+GGG | 0.353346 | 6_1:+85928960 | None:intergenic |
| TACATGTGGGTTTCCTCCAC+TGG | 0.356012 | 6_1:-85924639 | Msa0896200:CDS |
| GGGTTGAGTTGAGTTGAGTT+TGG | 0.365429 | 6_1:+85929064 | None:intergenic |
| GTCTCCCATGAAAACAAATA+AGG | 0.365880 | 6_1:+85924206 | None:intergenic |
| GAGGATTTCGTCAAGTGCTT+CGG | 0.378361 | 6_1:+85928959 | None:intergenic |
| ATAGGGTCGTATTTATATCT+AGG | 0.380733 | 6_1:+85927507 | None:intergenic |
| CCTGATGGCGAGAAAGCCTT+TGG | 0.384027 | 6_1:+85926549 | None:intergenic |
| TGCGATAATCGATGTGGAAC+CGG | 0.384328 | 6_1:-85927640 | Msa0896200:CDS |
| TCCTCCTCTTCTTCAGCCAT+TGG | 0.385964 | 6_1:-85927552 | Msa0896200:CDS |
| CGCCCAACCAGGGATTGAAT+AGG | 0.388581 | 6_1:+85926330 | None:intergenic |
| CTAAACAACAACCCATCATA+TGG | 0.389047 | 6_1:-85923309 | Msa0896200:CDS |
| TGTTCTTGATGAACTCGAAC+AGG | 0.398931 | 6_1:-85928883 | Msa0896200:CDS |
| AGCTCCTCGGTTAAATATTT+AGG | 0.401248 | 6_1:+85923754 | None:intergenic |
| CCAAAGGCTTTCTCGCCATC+AGG | 0.404809 | 6_1:-85926549 | Msa0896200:CDS |
| AAGCTAGAGATTGTTCTTGA+TGG | 0.407573 | 6_1:-85924255 | Msa0896200:CDS |
| CAGGAAGCTTACCTCGTCTT+GGG | 0.413750 | 6_1:-85926622 | Msa0896200:CDS |
| GGTTGAGTTGAGTTGAGTTT+GGG | 0.421923 | 6_1:+85929065 | None:intergenic |
| GGTGGCTTCATCTTCTTCTT+CGG | 0.422588 | 6_1:+85928911 | None:intergenic |
| AGTGTACCGGCCTTGCTCTC+AGG | 0.426714 | 6_1:-85922913 | Msa0896200:CDS |
| GTGGACAGAGATGACTTTGA+TGG | 0.430972 | 6_1:+85923341 | None:intergenic |
| GAGATGACTTTGATGGGTTA+TGG | 0.434348 | 6_1:+85923348 | None:intergenic |
| GGGGAAAATTGTGTATTTGA+AGG | 0.440654 | 6_1:+85929117 | None:intergenic |
| CTCTGCAAGCATCTCGCCTT+CGG | 0.445241 | 6_1:+85925689 | None:intergenic |
| TGTTGTTTAGTTAGAGGGAG+TGG | 0.451047 | 6_1:+85923322 | None:intergenic |
| ATATCACTTCAAGTGCTTGC+GGG | 0.452817 | 6_1:-85924605 | Msa0896200:CDS |
| CAATCCCTGGTTGGGCGAAA+AGG | 0.452920 | 6_1:-85926324 | Msa0896200:CDS |
| AGATGAATTACATGCTGAAA+AGG | 0.455535 | 6_1:+85923464 | None:intergenic |
| CTCCTATTCAATCCCTGGTT+GGG | 0.456065 | 6_1:-85926332 | Msa0896200:CDS |
| TGTTTCATGCTGAGAATTAG+TGG | 0.458532 | 6_1:+85922841 | None:intergenic |
| TGGGTTGTTGTTTAGTTAGA+GGG | 0.461000 | 6_1:+85923317 | None:intergenic |
| ATTCCTGGTCCTGGCGATGC+AGG | 0.466456 | 6_1:-85923884 | Msa0896200:intron |
| GAGATGTCAAATAGCAAAGA+TGG | 0.467615 | 6_1:-85922521 | Msa0896200:three_prime_UTR |
| CCAGGAAGCTTACCTCGTCT+TGG | 0.471285 | 6_1:-85926623 | Msa0896200:CDS |
| AAAGGTAGAAGATGGGTAAT+GGG | 0.476605 | 6_1:-85926306 | Msa0896200:CDS |
| TCAACCCTCCCAGGAGGAAA+AGG | 0.477831 | 6_1:+85922743 | None:intergenic |
| TATATATACTAGGCAATGAA+TGG | 0.482970 | 6_1:-85922786 | Msa0896200:three_prime_UTR |
| ATGATCATAATTCCATATGA+TGG | 0.483751 | 6_1:+85923297 | None:intergenic |
| AGTAATTTCCTCCGCCCCAT+CGG | 0.485408 | 6_1:+85927587 | None:intergenic |
| AAAAGGTAGAAGATGGGTAA+TGG | 0.485525 | 6_1:-85926307 | Msa0896200:CDS |
| TTAACGCTTATTCAAGCCTA+AGG | 0.488547 | 6_1:-85924155 | Msa0896200:intron |
| AACAGTACCGTGTGCGGAGT+TGG | 0.489719 | 6_1:+85923259 | None:intergenic |
| AACTTGCTATTGCAAGCCGA+TGG | 0.492805 | 6_1:-85927603 | Msa0896200:CDS |
| CTGATGGCGAGAAAGCCTTT+GGG | 0.496894 | 6_1:+85926550 | None:intergenic |
| CAGGCTCAACAGCTCTTCCA+AGG | 0.497386 | 6_1:-85923786 | Msa0896200:CDS |
| TCTCCTATTCAATCCCTGGT+TGG | 0.497601 | 6_1:-85926333 | Msa0896200:CDS |
| ATTGCAAGCCGATGGGGCGG+AGG | 0.497775 | 6_1:-85927595 | Msa0896200:CDS |
| AATTCAATACCTGCATCGCC+AGG | 0.498370 | 6_1:+85923875 | None:intergenic |
| ATAGATCAGGCAAGCAGAGA+TGG | 0.499434 | 6_1:-85924445 | Msa0896200:intron |
| TTGTGATTGCAGATAGTCTT+GGG | 0.500242 | 6_1:-85923020 | Msa0896200:intron |
| GGAAAAGAGCGGGAAAATGA+AGG | 0.502864 | 6_1:+85929096 | None:intergenic |
| AGGTCGCAATTTGGCAAACT+AGG | 0.504156 | 6_1:-85923959 | Msa0896200:CDS |
| ACTCCGGAATTGTGAAAGTT+CGG | 0.505152 | 6_1:+85926502 | None:intergenic |
| AATGGGAGTAATATCTCAGC+TGG | 0.509544 | 6_1:-85926289 | Msa0896200:CDS |
| TTGAATAAGCGTTAAATGCA+AGG | 0.510783 | 6_1:+85924163 | None:intergenic |
| CAAGACGAGGTAAGCTTCCT+GGG | 0.510801 | 6_1:+85926624 | None:intergenic |
| TAATACTGGATCCTTCTCAA+TGG | 0.511893 | 6_1:-85922949 | Msa0896200:CDS |
| TTGGGCGAAAAGGTAGAAGA+TGG | 0.524719 | 6_1:-85926314 | Msa0896200:CDS |
| TATTATTGGAATATTAACAT+AGG | 0.525275 | 6_1:-85922561 | Msa0896200:three_prime_UTR |
| CAACTTCCTGAGAGCAAGGC+CGG | 0.525348 | 6_1:+85922907 | None:intergenic |
| GAAAAGAGCGGGAAAATGAA+GGG | 0.526263 | 6_1:+85929097 | None:intergenic |
| ATACCTGCATCGCCAGGACC+AGG | 0.530993 | 6_1:+85923881 | None:intergenic |
| GCGGAGTTGGATATAGATGA+AGG | 0.532846 | 6_1:+85923272 | None:intergenic |
| AAGTTCAGCACTCGTTGCAC+CGG | 0.537907 | 6_1:+85927621 | None:intergenic |
| GATATCTCCTATTCAATCCC+TGG | 0.539437 | 6_1:-85926337 | Msa0896200:CDS |
| TGATCATAATTCCATATGAT+GGG | 0.547427 | 6_1:+85923298 | None:intergenic |
| TCAGATCAGATATATATACT+AGG | 0.548065 | 6_1:-85922796 | Msa0896200:three_prime_UTR |
| GAAAGTTCGGACTCAAAAGC+TGG | 0.549057 | 6_1:+85926515 | None:intergenic |
| GTAATATCTCAGCTGGAGGA+TGG | 0.551313 | 6_1:-85926282 | Msa0896200:CDS |
| AGATCTAATGTTAACCTGCA+AGG | 0.554811 | 6_1:+85923694 | None:intergenic |
| GTTGTGATTGCAGATAGTCT+TGG | 0.557743 | 6_1:-85923021 | Msa0896200:intron |
| ACTTGCTATTGCAAGCCGAT+GGG | 0.557912 | 6_1:-85927602 | Msa0896200:CDS |
| GATGTGTCTTCAACCCTCCC+AGG | 0.559553 | 6_1:+85922734 | None:intergenic |
| TGGACAGAGATGACTTTGAT+GGG | 0.561105 | 6_1:+85923342 | None:intergenic |
| AAATTATTGCTGCCCGTCCA+CGG | 0.561603 | 6_1:-85923934 | Msa0896200:CDS |
| CTTAGAGAACACTATAGTTG+TGG | 0.564236 | 6_1:-85925712 | Msa0896200:CDS |
| TGATTTCAACAGAAGCGCTA+AGG | 0.564342 | 6_1:+85926241 | None:intergenic |
| GACACCAATGGCTGAAGAAG+AGG | 0.568796 | 6_1:+85927548 | None:intergenic |
| TGGGCGAAAAGGTAGAAGAT+GGG | 0.572664 | 6_1:-85926313 | Msa0896200:CDS |
| GCATGTTATATAGCTGATCC+TGG | 0.574846 | 6_1:+85923531 | None:intergenic |
| AAAAGAGCGGGAAAATGAAG+GGG | 0.579022 | 6_1:+85929098 | None:intergenic |
| TGATAAAATAACAGTGAAGA+CGG | 0.584166 | 6_1:+85922816 | None:intergenic |
| CGAAGGCGAGATGCTTGCAG+AGG | 0.584319 | 6_1:-85925688 | Msa0896200:CDS |
| ATTGCTTGAAAATATGGCAT+CGG | 0.585924 | 6_1:+85923717 | None:intergenic |
| GAAGGCGAGATGCTTGCAGA+GGG | 0.592346 | 6_1:-85925687 | Msa0896200:CDS |
| ATAGCACATTTGTAGTGTAC+CGG | 0.594028 | 6_1:-85922926 | Msa0896200:CDS |
| GGGAGACAGAAGTCCGCAGA+AGG | 0.595381 | 6_1:-85923000 | Msa0896200:CDS |
| TATATCACTTCAAGTGCTTG+CGG | 0.596182 | 6_1:-85924606 | Msa0896200:CDS |
| TATTTAGGCAGAGCACACCT+TGG | 0.596351 | 6_1:+85923769 | None:intergenic |
| AATTCAACTTCCTGAGAGCA+AGG | 0.596757 | 6_1:+85922903 | None:intergenic |
| ACCAATGGCTGAAGAAGAGG+AGG | 0.597959 | 6_1:+85927551 | None:intergenic |
| CTTGCTATTGCAAGCCGATG+GGG | 0.599308 | 6_1:-85927601 | Msa0896200:CDS |
| AAATGTGCTATCCATTGAGA+AGG | 0.599756 | 6_1:+85922938 | None:intergenic |
| GCTATTGCAAGCCGATGGGG+CGG | 0.604594 | 6_1:-85927598 | Msa0896200:CDS |
| CGGAGTTGGATATAGATGAA+GGG | 0.604827 | 6_1:+85923273 | None:intergenic |
| TCAACAGTTTCTGTCTCAGA+AGG | 0.606296 | 6_1:+85923488 | None:intergenic |
| GAGTTCATCAAGAACAAGAT+CGG | 0.608170 | 6_1:+85928890 | None:intergenic |
| CCCATGAAAACAAATAAGGA+AGG | 0.608778 | 6_1:+85924210 | None:intergenic |
| AACACTATAGTTGTGGCCGA+AGG | 0.609085 | 6_1:-85925705 | Msa0896200:CDS |
| GGTGATTTAAGGAAAAGAGC+GGG | 0.611753 | 6_1:+85929086 | None:intergenic |
| CAGAAGGCATTTAAGTACAC+AGG | 0.615378 | 6_1:-85922984 | Msa0896200:CDS |
| GGGTGATTTAAGGAAAAGAG+CGG | 0.616440 | 6_1:+85929085 | None:intergenic |
| TATCCATACAAGATTACCAC+AGG | 0.619212 | 6_1:-85925741 | Msa0896200:intron |
| ATGTGGGTTTCCTCCACTGG+AGG | 0.624222 | 6_1:-85924636 | Msa0896200:CDS |
| TCTATATCCAACTCCGCACA+CGG | 0.626305 | 6_1:-85923266 | Msa0896200:intron |
| ATACTAGGCAATGAATGGAG+TGG | 0.626330 | 6_1:-85922781 | Msa0896200:three_prime_UTR |
| ACAGTTTCTGTCTCAGAAGG+TGG | 0.626926 | 6_1:+85923491 | None:intergenic |
| GCTGGTGGGTCCCCAAGACG+AGG | 0.631685 | 6_1:+85926611 | None:intergenic |
| TTCACAATTCCGGAGTTGTG+AGG | 0.638888 | 6_1:-85926495 | Msa0896200:intron |
| ATAAATACGACCCTATCAGA+AGG | 0.639052 | 6_1:-85927500 | Msa0896200:CDS |
| AAACACATCAATGACACCAA+TGG | 0.639648 | 6_1:+85927536 | None:intergenic |
| GATATATCTCTATCCTCCAG+TGG | 0.639753 | 6_1:+85924623 | None:intergenic |
| CAAAGCGAGTAACGAAAGAG+AGG | 0.643318 | 6_1:+85928940 | None:intergenic |
| AGGAAGCTTACCTCGTCTTG+GGG | 0.645717 | 6_1:-85926621 | Msa0896200:CDS |
| CCAGCAGTACCTCACAACTC+CGG | 0.647891 | 6_1:+85926486 | None:intergenic |
| TGTGTATTTGAAGGAAACAG+CGG | 0.648400 | 6_1:+85929126 | None:intergenic |
| GAAATCTGCGATAATCGATG+TGG | 0.650756 | 6_1:-85927646 | Msa0896200:CDS |
| GGGAGTAATATCTCAGCTGG+AGG | 0.655108 | 6_1:-85926286 | Msa0896200:CDS |
| GGTATTAACAGTACCGTGTG+CGG | 0.658101 | 6_1:+85923253 | None:intergenic |
| TTCATCAAGAACAAGATCGG+TGG | 0.662941 | 6_1:+85928893 | None:intergenic |
| GTGTACTTAAATGCCTTCTG+CGG | 0.670251 | 6_1:+85922987 | None:intergenic |
| ATATCTCTATCCTCCAGTGG+AGG | 0.677895 | 6_1:+85924626 | None:intergenic |
| ATGACTTTGATGGGTTATGG+TGG | 0.679206 | 6_1:+85923351 | None:intergenic |
| GTTCTCTAAGAAGAATCCTG+TGG | 0.698932 | 6_1:+85925725 | None:intergenic |
| TATTTGGCTAGACAAAGAAG+AGG | 0.709508 | 6_1:-85924382 | Msa0896200:intron |
| GTGTCTTCAACCCTCCCAGG+AGG | 0.711462 | 6_1:+85922737 | None:intergenic |
| TGTTATATAGCTGATCCTGG+CGG | 0.725250 | 6_1:+85923534 | None:intergenic |
| TCTGCCTAAATATTTAACCG+AGG | 0.740425 | 6_1:-85923758 | Msa0896200:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTAATTTTGATTCAATTT+TGG | - | chr6_1:85924753-85924772 | Msa0896200:intron | 10.0% |
| !! | TAAAACATTTAAAAAGATTA+TGG | + | chr6_1:85925531-85925550 | None:intergenic | 10.0% |
| !!! | TTTATTTTTTTCTTAATGCA+AGG | + | chr6_1:85923348-85923367 | None:intergenic | 15.0% |
| !!! | AAATGATTTTTTTAGCAAAA+TGG | - | chr6_1:85923410-85923429 | Msa0896200:intron | 15.0% |
| !! | AAAAAATTTCAAAAACAAAG+AGG | - | chr6_1:85923586-85923605 | Msa0896200:intron | 15.0% |
| !!! | TCTGGTAATTAAATTTTATA+TGG | - | chr6_1:85924463-85924482 | Msa0896200:intron | 15.0% |
| !!! | CTGGTAATTAAATTTTATAT+GGG | - | chr6_1:85924464-85924483 | Msa0896200:intron | 15.0% |
| !!! | CTACTATTATTTTTTTTTCA+TGG | + | chr6_1:85924536-85924555 | None:intergenic | 15.0% |
| !! | TACAAAACAAAACTATATTT+GGG | + | chr6_1:85924724-85924743 | None:intergenic | 15.0% |
| !! | ATACAAAACAAAACTATATT+TGG | + | chr6_1:85924725-85924744 | None:intergenic | 15.0% |
| !!! | AAATTGTTAAGTTATTTTGT+TGG | - | chr6_1:85924948-85924967 | Msa0896200:intron | 15.0% |
| !! | ATAAAAACACAAAATTAACA+TGG | + | chr6_1:85925031-85925050 | None:intergenic | 15.0% |
| !! | TATATCATAATGACATTTAA+AGG | + | chr6_1:85925632-85925651 | None:intergenic | 15.0% |
| !! | AAAGCATAAAAATCAAATAT+CGG | + | chr6_1:85926098-85926117 | None:intergenic | 15.0% |
| !!! | CTTTTTTTATACTTTTACTA+AGG | - | chr6_1:85926197-85926216 | Msa0896200:intron | 15.0% |
| !! | AAAAAATTATATTACATCTC+AGG | + | chr6_1:85926415-85926434 | None:intergenic | 15.0% |
| !!! | TGTAATATAATTTTTTTCTG+AGG | - | chr6_1:85926419-85926438 | Msa0896200:intron | 15.0% |
| !! | TTAAGATAATAGTAAACTAT+TGG | + | chr6_1:85926792-85926811 | None:intergenic | 15.0% |
| !! | TACTATTATCTTAATGATTA+TGG | - | chr6_1:85926798-85926817 | Msa0896200:intron | 15.0% |
| !! | GTACAAAAAAATAATTTCTA+AGG | + | chr6_1:85926881-85926900 | None:intergenic | 15.0% |
| !! | ATCAATATCTTGAAATAATT+TGG | - | chr6_1:85928530-85928549 | Msa0896200:intron | 15.0% |
| !! | TCAATATCTTGAAATAATTT+GGG | - | chr6_1:85928531-85928550 | Msa0896200:intron | 15.0% |
| !! | TATTATTGGAATATTAACAT+AGG | - | chr6_1:85929122-85929141 | Msa0896200:five_prime_UTR | 15.0% |
| !! | CAATAATTATCATGTTTCTT+AGG | - | chr6_1:85922917-85922936 | Msa0896200:CDS | 20.0% |
| !! | TCTACTATAATCTTCAAATA+AGG | - | chr6_1:85923096-85923115 | Msa0896200:intron | 20.0% |
| !!! | AAACAAATCTAAAACAAACA+GGG | + | chr6_1:85923122-85923141 | None:intergenic | 20.0% |
| !!! | TAAACAAATCTAAAACAAAC+AGG | + | chr6_1:85923123-85923142 | None:intergenic | 20.0% |
| !!! | TGTTTGTTTTAGATTTGTTT+AGG | - | chr6_1:85923122-85923141 | Msa0896200:intron | 20.0% |
| !!! | AAAATCACTTTTGTCATTTT+TGG | - | chr6_1:85923167-85923186 | Msa0896200:intron | 20.0% |
| !!! | AAATCACTTTTGTCATTTTT+GGG | - | chr6_1:85923168-85923187 | Msa0896200:intron | 20.0% |
| !!! | TGAAATAGATTTTCATTTTG+AGG | - | chr6_1:85923384-85923403 | Msa0896200:intron | 20.0% |
| !! | AAAAAAAATCCAAAACAAAC+AGG | - | chr6_1:85923509-85923528 | Msa0896200:CDS | 20.0% |
| !! | TTGTATAAAAGTGATTTCTT+TGG | - | chr6_1:85923636-85923655 | Msa0896200:intron | 20.0% |
| !! | TGTATAAAAGTGATTTCTTT+GGG | - | chr6_1:85923637-85923656 | Msa0896200:intron | 20.0% |
| !! | CAAAAACCTAAGAATATTTA+GGG | + | chr6_1:85923769-85923788 | None:intergenic | 20.0% |
| !! | TCAAAAACCTAAGAATATTT+AGG | + | chr6_1:85923770-85923789 | None:intergenic | 20.0% |
| !! | AAAATCTACTATAATCTACA+TGG | - | chr6_1:85923842-85923861 | Msa0896200:intron | 20.0% |
| !!! | TATAATCTACATGGATTTTT+AGG | - | chr6_1:85923851-85923870 | Msa0896200:intron | 20.0% |
| !!! | TGTAATTGAAGTTTGAAATT+AGG | - | chr6_1:85924307-85924326 | Msa0896200:intron | 20.0% |
| !!! | GTAATTGAAGTTTGAAATTA+GGG | - | chr6_1:85924308-85924327 | Msa0896200:intron | 20.0% |
| !! | TTAATGTTATTCAAAATGAG+AGG | - | chr6_1:85924666-85924685 | Msa0896200:intron | 20.0% |
| !! | ACAAAACAAAACTATATTTG+GGG | + | chr6_1:85924723-85924742 | None:intergenic | 20.0% |
| !! | CAATATATGTAATGATCTAA+TGG | - | chr6_1:85924844-85924863 | Msa0896200:intron | 20.0% |
| !!! | ATTTGAAATTCAAAGTCAAT+TGG | + | chr6_1:85925228-85925247 | None:intergenic | 20.0% |
| !!! | GATTTTTATCAAAGCATAAA+AGG | + | chr6_1:85925486-85925505 | None:intergenic | 20.0% |
| !!! | TTTAAAGGAGTACATTTAAT+TGG | + | chr6_1:85925617-85925636 | None:intergenic | 20.0% |
| !! | TTACAAAATTAAGAGAACAT+GGG | + | chr6_1:85926064-85926083 | None:intergenic | 20.0% |
| !! | TTTACAAAATTAAGAGAACA+TGG | + | chr6_1:85926065-85926084 | None:intergenic | 20.0% |
| !!! | CTAATTTTTATCCAAACAAA+TGG | - | chr6_1:85926174-85926193 | Msa0896200:intron | 20.0% |
| !! | TATAAAAAAAGCCATTTGTT+TGG | + | chr6_1:85926188-85926207 | None:intergenic | 20.0% |
| !!! | AGTTCAGATTTCTTTTTTAA+GGG | + | chr6_1:85926331-85926350 | None:intergenic | 20.0% |
| !!! | TTCTTCATTAATCTTTTAGA+GGG | - | chr6_1:85926727-85926746 | Msa0896200:intron | 20.0% |
| !!! | TACTTTTACAAAAGAAGAAA+CGG | - | chr6_1:85927122-85927141 | Msa0896200:intron | 20.0% |
| !! | AAATACATGTGACTATTAAA+TGG | + | chr6_1:85927173-85927192 | None:intergenic | 20.0% |
| !!! | ATAGTCACATGTATTTTTAT+TGG | - | chr6_1:85927177-85927196 | Msa0896200:intron | 20.0% |
| !!! | TTATTGCTTGTATTTTTATG+TGG | - | chr6_1:85927671-85927690 | Msa0896200:intron | 20.0% |
| !!! | TATTGCTTGTATTTTTATGT+GGG | - | chr6_1:85927672-85927691 | Msa0896200:intron | 20.0% |
| !! | CAATATCTTGAAATAATTTG+GGG | - | chr6_1:85928532-85928551 | Msa0896200:intron | 20.0% |
| !!! | GAGACAGTTTATTTTTAATT+TGG | - | chr6_1:85929050-85929069 | Msa0896200:five_prime_UTR | 20.0% |
| !! | TTTATAGGATTTTACCAATG+TGG | + | chr6_1:85922504-85922523 | None:intergenic | 25.0% |
| ! | GAAGTATACTATTATTGACA+TGG | - | chr6_1:85922992-85923011 | Msa0896200:CDS | 25.0% |
| ! | TATTATTGACATGGATTCTT+AGG | - | chr6_1:85923001-85923020 | Msa0896200:CDS | 25.0% |
| !! | ATTTTTACCAGTACGTTTTT+TGG | - | chr6_1:85924207-85924226 | Msa0896200:CDS | 25.0% |
| !!! | TTTTTACCAGTACGTTTTTT+GGG | - | chr6_1:85924208-85924227 | Msa0896200:CDS | 25.0% |
| !!! | TTTCTTCCTTTTTTCTTGTT+TGG | - | chr6_1:85924242-85924261 | Msa0896200:CDS | 25.0% |
| ! | AACAAACCAAACAAGAAAAA+AGG | + | chr6_1:85924251-85924270 | None:intergenic | 25.0% |
| !! | ATATTTTATCATGACTTCCT+TGG | + | chr6_1:85924510-85924529 | None:intergenic | 25.0% |
| !!! | TTTTATACTACTAGCTTTTG+TGG | - | chr6_1:85924623-85924642 | Msa0896200:CDS | 25.0% |
| !!! | TACAAAATATGGTTTGTTGA+TGG | + | chr6_1:85924796-85924815 | None:intergenic | 25.0% |
| !! | TCAACAAACCATATTTTGTA+TGG | - | chr6_1:85924796-85924815 | Msa0896200:intron | 25.0% |
| ! | CTTAAAAGCCATACAAAATA+TGG | + | chr6_1:85924807-85924826 | None:intergenic | 25.0% |
| !! | CATATTTTGTATGGCTTTTA+AGG | - | chr6_1:85924805-85924824 | Msa0896200:intron | 25.0% |
| ! | ATACATAAGATTTAACTGAC+AGG | + | chr6_1:85924895-85924914 | None:intergenic | 25.0% |
| !! | ATTTTGTTGGAAATTTGTGT+TGG | - | chr6_1:85924961-85924980 | Msa0896200:intron | 25.0% |
| !! | TTATCATATGGTGTTAACTT+CGG | - | chr6_1:85925004-85925023 | Msa0896200:intron | 25.0% |
| !!! | AACACATAGTTCTAAACATT+AGG | + | chr6_1:85925258-85925277 | None:intergenic | 25.0% |
| ! | AAAAAAAGGAATGCTAAAAG+AGG | + | chr6_1:85925661-85925680 | None:intergenic | 25.0% |
| ! | TACTTCATACTAACATAACA+TGG | + | chr6_1:85925745-85925764 | None:intergenic | 25.0% |
| !!! | TAGTATGAAGTATTGTCATT+AGG | - | chr6_1:85925753-85925772 | Msa0896200:intron | 25.0% |
| ! | TACAAAATTAAGAGAACATG+GGG | + | chr6_1:85926063-85926082 | None:intergenic | 25.0% |
| !!! | GAGTTCAGATTTCTTTTTTA+AGG | + | chr6_1:85926332-85926351 | None:intergenic | 25.0% |
| !! | AAGATGTTGAAGTTGATTAT+TGG | - | chr6_1:85926388-85926407 | Msa0896200:intron | 25.0% |
| !! | AGATGTTGAAGTTGATTATT+GGG | - | chr6_1:85926389-85926408 | Msa0896200:intron | 25.0% |
| !!! | TGTGCAGTAGTTTTTTTTTA+GGG | - | chr6_1:85926548-85926567 | Msa0896200:CDS | 25.0% |
| !! | GTTCTTCATTAATCTTTTAG+AGG | - | chr6_1:85926726-85926745 | Msa0896200:intron | 25.0% |
| ! | AATTTCAATGTGATATGTCT+CGG | - | chr6_1:85926845-85926864 | Msa0896200:intron | 25.0% |
| !!! | AACTTCAAAACTTTGCTATT+TGG | - | chr6_1:85926932-85926951 | Msa0896200:intron | 25.0% |
| ! | CTATTAAATGGCAAATTTGA+GGG | + | chr6_1:85927161-85927180 | None:intergenic | 25.0% |
| ! | ACTATTAAATGGCAAATTTG+AGG | + | chr6_1:85927162-85927181 | None:intergenic | 25.0% |
| ! | TTGTCATACTATCTGATATT+TGG | - | chr6_1:85927285-85927304 | Msa0896200:intron | 25.0% |
| !!! | ATTGCTTGTATTTTTATGTG+GGG | - | chr6_1:85927673-85927692 | Msa0896200:intron | 25.0% |
| ! | TGATCATAATTCCATATGAT+GGG | + | chr6_1:85928388-85928407 | None:intergenic | 25.0% |
| ! | ATGATCATAATTCCATATGA+TGG | + | chr6_1:85928389-85928408 | None:intergenic | 25.0% |
| ! | AAAGGAAAAAGAAACAATTC+AGG | + | chr6_1:85928454-85928473 | None:intergenic | 25.0% |
| ! | TTGTCACTATCTATTCTATT+TGG | - | chr6_1:85928499-85928518 | Msa0896200:intron | 25.0% |
| ! | ATTTCAGTATATTCTTTCCA+AGG | + | chr6_1:85928636-85928655 | None:intergenic | 25.0% |
| !!! | AAAGAAATTTTTGGTTCACA+GGG | + | chr6_1:85928811-85928830 | None:intergenic | 25.0% |
| !!! | AAAAGAAATTTTTGGTTCAC+AGG | + | chr6_1:85928812-85928831 | None:intergenic | 25.0% |
| !! | GTGAACCAAAAATTTCTTTT+TGG | - | chr6_1:85928812-85928831 | Msa0896200:intron | 25.0% |
| !! | GACAACCAAAAAGAAATTTT+TGG | + | chr6_1:85928820-85928839 | None:intergenic | 25.0% |
| ! | TGATAAAATAACAGTGAAGA+CGG | + | chr6_1:85928870-85928889 | None:intergenic | 25.0% |
| ! | TCAGATCAGATATATATACT+AGG | - | chr6_1:85928887-85928906 | Msa0896200:CDS | 25.0% |
| ! | TATATATACTAGGCAATGAA+TGG | - | chr6_1:85928897-85928916 | Msa0896200:CDS | 25.0% |
| ! | GTGAAAATTGTTAGTATAGT+AGG | - | chr6_1:85929010-85929029 | Msa0896200:CDS | 25.0% |
| ! | TGATAGACTACAGTTATTAT+TGG | - | chr6_1:85929108-85929127 | Msa0896200:five_prime_UTR | 25.0% |
| !! | ATCGTTATTTTCTCTCTCTA+GGG | + | chr6_1:85922642-85922661 | None:intergenic | 30.0% |
| !!! | CTCTGATTTTGCATTTTTTC+TGG | + | chr6_1:85922689-85922708 | None:intergenic | 30.0% |
| CAGAAAAAATGCAAAATCAG+AGG | - | chr6_1:85922687-85922706 | Msa0896200:three_prime_UTR | 30.0% | |
| GTGATTTCTAAGCACTTAAA+GGG | + | chr6_1:85923535-85923554 | None:intergenic | 30.0% | |
| AGTGATTTCTAAGCACTTAA+AGG | + | chr6_1:85923536-85923555 | None:intergenic | 30.0% | |
| AACACACCCTAAATATTCTT+AGG | - | chr6_1:85923760-85923779 | Msa0896200:CDS | 30.0% | |
| AACTTGAAGTGAAATCTACT+TGG | - | chr6_1:85923938-85923957 | Msa0896200:CDS | 30.0% | |
| TGAAATCTACTTGGATTCTT+AGG | - | chr6_1:85923947-85923966 | Msa0896200:CDS | 30.0% | |
| ATAGGGTCGTATTTATATCT+AGG | + | chr6_1:85924179-85924198 | None:intergenic | 30.0% | |
| GGTAAAAATTCCTTCTGATA+GGG | + | chr6_1:85924196-85924215 | None:intergenic | 30.0% | |
| TGGTAAAAATTCCTTCTGAT+AGG | + | chr6_1:85924197-85924216 | None:intergenic | 30.0% | |
| GGCAAGTAAAAAACAATGAT+TGG | - | chr6_1:85924433-85924452 | Msa0896200:CDS | 30.0% | |
| !!! | ACAATGATTGGTTAGTTTTC+TGG | - | chr6_1:85924445-85924464 | Msa0896200:intron | 30.0% |
| AGCTAGTAGTATAAAAACGT+GGG | + | chr6_1:85924619-85924638 | None:intergenic | 30.0% | |
| AAGCTAGTAGTATAAAAACG+TGG | + | chr6_1:85924620-85924639 | None:intergenic | 30.0% | |
| !! | CAATTATGCTACTTTGCTTA+TGG | - | chr6_1:85924918-85924937 | Msa0896200:intron | 30.0% |
| TAAACCAATCCAAGTATGAA+TGG | + | chr6_1:85924987-85925006 | None:intergenic | 30.0% | |
| !! | ACTTGGATTGGTTTATCATA+TGG | - | chr6_1:85924992-85925011 | Msa0896200:intron | 30.0% |
| !!! | ATGTTCAAGTTGATGTTTTG+AGG | - | chr6_1:85925286-85925305 | Msa0896200:intron | 30.0% |
| TTATTACACAGTTCTTGTTG+AGG | - | chr6_1:85925548-85925567 | Msa0896200:intron | 30.0% | |
| !! | GAAGTATTGTCATTAGGATT+AGG | - | chr6_1:85925759-85925778 | Msa0896200:intron | 30.0% |
| GGTTGCATCTAATTGATTAA+AGG | - | chr6_1:85925780-85925799 | Msa0896200:intron | 30.0% | |
| !!! | GTGTGCAGTAGTTTTTTTTT+AGG | - | chr6_1:85926547-85926566 | Msa0896200:CDS | 30.0% |
| !!! | TTTTTTTTAGGGATCCAACT+TGG | - | chr6_1:85926559-85926578 | Msa0896200:CDS | 30.0% |
| CACTTCAATATGTGGATAAT+CGG | - | chr6_1:85926999-85927018 | Msa0896200:intron | 30.0% | |
| !! | TCCTTCCTTATTTGTTTTCA+TGG | - | chr6_1:85927472-85927491 | Msa0896200:intron | 30.0% |
| !! | CCTTCCTTATTTGTTTTCAT+GGG | - | chr6_1:85927473-85927492 | Msa0896200:intron | 30.0% |
| TTGAATAAGCGTTAAATGCA+AGG | + | chr6_1:85927523-85927542 | None:intergenic | 30.0% | |
| TATTAGACACTTTGATATGC+AGG | - | chr6_1:85927704-85927723 | Msa0896200:intron | 30.0% | |
| !!! | TGTCGATTTCTTTTTATTCC+TGG | - | chr6_1:85927784-85927803 | Msa0896200:intron | 30.0% |
| !!! | AATATAATTTTGGAGCTCCT+CGG | + | chr6_1:85927945-85927964 | None:intergenic | 30.0% |
| !! | TGGCATCGGAAATATAATTT+TGG | + | chr6_1:85927955-85927974 | None:intergenic | 30.0% |
| ATTGCTTGAAAATATGGCAT+CGG | + | chr6_1:85927969-85927988 | None:intergenic | 30.0% | |
| GCGGAAAAATACAATTTCTT+GGG | + | chr6_1:85928133-85928152 | None:intergenic | 30.0% | |
| AGATGAATTACATGCTGAAA+AGG | + | chr6_1:85928222-85928241 | None:intergenic | 30.0% | |
| !!! | TTTTGTTTCTGAAAACCAGA+AGG | + | chr6_1:85928277-85928296 | None:intergenic | 30.0% |
| ACTCATTATTCTTCAAGACT+CGG | - | chr6_1:85928609-85928628 | Msa0896200:intron | 30.0% | |
| !!! | GGAATCACTTGTTTTAATAC+TGG | - | chr6_1:85928720-85928739 | Msa0896200:intron | 30.0% |
| ! | TAATATTTACCTTTTCCTCC+TGG | - | chr6_1:85928931-85928950 | Msa0896200:CDS | 30.0% |
| ! | AATATTTACCTTTTCCTCCT+GGG | - | chr6_1:85928932-85928951 | Msa0896200:CDS | 30.0% |
| TTGACATCTCTTAGTAAATC+AGG | + | chr6_1:85929152-85929171 | None:intergenic | 30.0% | |
| !! | TGTGAAAAAGCGCGTTTTAT+AGG | + | chr6_1:85922519-85922538 | None:intergenic | 35.0% |
| AGCGGAAAAATAGAGGAATT+GGG | + | chr6_1:85922542-85922561 | None:intergenic | 35.0% | |
| TGTGTATTTGAAGGAAACAG+CGG | + | chr6_1:85922560-85922579 | None:intergenic | 35.0% | |
| GGGGAAAATTGTGTATTTGA+AGG | + | chr6_1:85922569-85922588 | None:intergenic | 35.0% | |
| AGTTGAGTTTGGGTGATTTA+AGG | + | chr6_1:85922611-85922630 | None:intergenic | 35.0% | |
| !! | CATCGTTATTTTCTCTCTCT+AGG | + | chr6_1:85922643-85922662 | None:intergenic | 35.0% |
| GAGTTCATCAAGAACAAGAT+CGG | + | chr6_1:85922796-85922815 | None:intergenic | 35.0% | |
| TCTTGTAATCTCTCTCTCTT+AGG | - | chr6_1:85922825-85922844 | Msa0896200:three_prime_UTR | 35.0% | |
| CTTGTAATCTCTCTCTCTTA+GGG | - | chr6_1:85922826-85922845 | Msa0896200:three_prime_UTR | 35.0% | |
| AAACACATCAATGACACCAA+TGG | + | chr6_1:85924150-85924169 | None:intergenic | 35.0% | |
| ATAAATACGACCCTATCAGA+AGG | - | chr6_1:85924183-85924202 | Msa0896200:CDS | 35.0% | |
| ATCATTCCCAAAAAACGTAC+TGG | + | chr6_1:85924217-85924236 | None:intergenic | 35.0% | |
| ! | ACTGACACTTTTGATCAAAG+TGG | - | chr6_1:85924341-85924360 | Msa0896200:intron | 35.0% |
| ! | ACACAGTCATGACTCTTTTT+AGG | - | chr6_1:85924370-85924389 | Msa0896200:intron | 35.0% |
| ! | CACAGTCATGACTCTTTTTA+GGG | - | chr6_1:85924371-85924390 | Msa0896200:intron | 35.0% |
| TGTTGGTCCTTCACATATTA+GGG | - | chr6_1:85924412-85924431 | Msa0896200:CDS | 35.0% | |
| TTACTTGCCCTAATATGTGA+AGG | + | chr6_1:85924422-85924441 | None:intergenic | 35.0% | |
| ATGGGCAAATTACCTATGAA+AGG | - | chr6_1:85924482-85924501 | Msa0896200:intron | 35.0% | |
| CTTCATTGCTCAAGTTTCAT+TGG | - | chr6_1:85924565-85924584 | Msa0896200:CDS | 35.0% | |
| !!! | GATTTTTGTTGTTGTCCCAA+AGG | - | chr6_1:85925118-85925137 | Msa0896200:intron | 35.0% |
| GATATCTGACATAAACAGCA+TGG | + | chr6_1:85925332-85925351 | None:intergenic | 35.0% | |
| AAAAGGTAGAAGATGGGTAA+TGG | - | chr6_1:85925376-85925395 | Msa0896200:intron | 35.0% | |
| AAAGGTAGAAGATGGGTAAT+GGG | - | chr6_1:85925377-85925396 | Msa0896200:intron | 35.0% | |
| ! | GGAGGATGGACATTTTTATT+TGG | - | chr6_1:85925415-85925434 | Msa0896200:intron | 35.0% |
| CATTTCAGGCACACAAAAAA+AGG | + | chr6_1:85925675-85925694 | None:intergenic | 35.0% | |
| TATCCATACAAGATTACCAC+AGG | - | chr6_1:85925942-85925961 | Msa0896200:intron | 35.0% | |
| AATCCTGTGGTAATCTTGTA+TGG | + | chr6_1:85925948-85925967 | None:intergenic | 35.0% | |
| CTTAGAGAACACTATAGTTG+TGG | - | chr6_1:85925971-85925990 | Msa0896200:intron | 35.0% | |
| GTGAACTTCATGGATAAACA+GGG | + | chr6_1:85926131-85926150 | None:intergenic | 35.0% | |
| AGTGAACTTCATGGATAAAC+AGG | + | chr6_1:85926132-85926151 | None:intergenic | 35.0% | |
| !!! | ATTTTTTTCTGAGGTGCCTA+TGG | - | chr6_1:85926428-85926447 | Msa0896200:intron | 35.0% |
| !!! | TTTTTTTCTGAGGTGCCTAT+GGG | - | chr6_1:85926429-85926448 | Msa0896200:intron | 35.0% |
| AAAAAACTACTGCACACAAC+TGG | + | chr6_1:85926544-85926563 | None:intergenic | 35.0% | |
| TTGTACTTGTGTGTAGTTGT+TGG | - | chr6_1:85926640-85926659 | Msa0896200:intron | 35.0% | |
| TGTACTTGTGTGTAGTTGTT+GGG | - | chr6_1:85926641-85926660 | Msa0896200:intron | 35.0% | |
| CTTGAAAGAAGTCAAGCTTA+TGG | - | chr6_1:85926704-85926723 | Msa0896200:intron | 35.0% | |
| !! | TTGGTACGTATTTTTGTGAG+TGG | - | chr6_1:85926951-85926970 | Msa0896200:intron | 35.0% |
| ! | TGCATTGTCACTTCAATATG+TGG | - | chr6_1:85926991-85927010 | Msa0896200:intron | 35.0% |
| ! | TTGCTGCAGATTTTTACATG+TGG | - | chr6_1:85927030-85927049 | Msa0896200:intron | 35.0% |
| ! | TGCTGCAGATTTTTACATGT+GGG | - | chr6_1:85927031-85927050 | Msa0896200:intron | 35.0% |
| TATATCACTTCAAGTGCTTG+CGG | - | chr6_1:85927077-85927096 | Msa0896200:intron | 35.0% | |
| CTGATCTATTGCATAGGTAA+AGG | + | chr6_1:85927227-85927246 | None:intergenic | 35.0% | |
| CTTTACCTATGCAATAGATC+AGG | - | chr6_1:85927225-85927244 | Msa0896200:intron | 35.0% | |
| TATTTGGCTAGACAAAGAAG+AGG | - | chr6_1:85927301-85927320 | Msa0896200:intron | 35.0% | |
| ! | CTTTTATACCAACGTGACAA+AGG | + | chr6_1:85927360-85927379 | None:intergenic | 35.0% |
| ! | TTCTTCGTAGAGAAGACTTT+TGG | - | chr6_1:85927404-85927423 | Msa0896200:intron | 35.0% |
| AAGCTAGAGATTGTTCTTGA+TGG | - | chr6_1:85927428-85927447 | Msa0896200:intron | 35.0% | |
| CCCATGAAAACAAATAAGGA+AGG | + | chr6_1:85927476-85927495 | None:intergenic | 35.0% | |
| GTCTCCCATGAAAACAAATA+AGG | + | chr6_1:85927480-85927499 | None:intergenic | 35.0% | |
| TTAACGCTTATTCAAGCCTA+AGG | - | chr6_1:85927528-85927547 | Msa0896200:CDS | 35.0% | |
| ! | TTTCTTTTTATTCCTGGTCC+TGG | - | chr6_1:85927790-85927809 | Msa0896200:intron | 35.0% |
| ! | TAACACTCAAGTGTGTTTTC+AGG | - | chr6_1:85927878-85927897 | Msa0896200:intron | 35.0% |
| TCTGCCTAAATATTTAACCG+AGG | - | chr6_1:85927925-85927944 | Msa0896200:intron | 35.0% | |
| AGCTCCTCGGTTAAATATTT+AGG | + | chr6_1:85927932-85927951 | None:intergenic | 35.0% | |
| GCAAGGATTGCTTGAAAATA+TGG | + | chr6_1:85927975-85927994 | None:intergenic | 35.0% | |
| !! | TATTTTCAAGCAATCCTTGC+AGG | - | chr6_1:85927975-85927994 | Msa0896200:intron | 35.0% |
| AGATCTAATGTTAACCTGCA+AGG | + | chr6_1:85927992-85928011 | None:intergenic | 35.0% | |
| CTTCATCTCGAATACATTTC+TGG | - | chr6_1:85928033-85928052 | Msa0896200:intron | 35.0% | |
| ACTCATACATGTTTGACTAC+AGG | - | chr6_1:85928094-85928113 | Msa0896200:intron | 35.0% | |
| CTCATACATGTTTGACTACA+GGG | - | chr6_1:85928095-85928114 | Msa0896200:intron | 35.0% | |
| GGCGGAAAAATACAATTTCT+TGG | + | chr6_1:85928134-85928153 | None:intergenic | 35.0% | |
| ! | AGAAATTGTATTTTTCCGCC+AGG | - | chr6_1:85928134-85928153 | Msa0896200:intron | 35.0% |
| CTTTAATAACTGTTGCCTTC+TGG | - | chr6_1:85928259-85928278 | Msa0896200:intron | 35.0% | |
| !! | TGGGTTGTTGTTTAGTTAGA+GGG | + | chr6_1:85928369-85928388 | None:intergenic | 35.0% |
| !! | ATGGGTTGTTGTTTAGTTAG+AGG | + | chr6_1:85928370-85928389 | None:intergenic | 35.0% |
| CTAAACAACAACCCATCATA+TGG | - | chr6_1:85928374-85928393 | Msa0896200:intron | 35.0% | |
| CATTGTTGTGTTGTACGAAA+AGG | + | chr6_1:85928472-85928491 | None:intergenic | 35.0% | |
| TTGTGATTGCAGATAGTCTT+GGG | - | chr6_1:85928663-85928682 | Msa0896200:intron | 35.0% | |
| TAATACTGGATCCTTCTCAA+TGG | - | chr6_1:85928734-85928753 | Msa0896200:intron | 35.0% | |
| AAATGTGCTATCCATTGAGA+AGG | + | chr6_1:85928748-85928767 | None:intergenic | 35.0% | |
| ATAGCACATTTGTAGTGTAC+CGG | - | chr6_1:85928757-85928776 | Msa0896200:intron | 35.0% | |
| TGTTTCATGCTGAGAATTAG+TGG | + | chr6_1:85928845-85928864 | None:intergenic | 35.0% | |
| ! | ACAATTTTCACAGCTTGACA+GGG | + | chr6_1:85929001-85929020 | None:intergenic | 35.0% |
| ! | AACAATTTTCACAGCTTGAC+AGG | + | chr6_1:85929002-85929021 | None:intergenic | 35.0% |
| GAGATGTCAAATAGCAAAGA+TGG | - | chr6_1:85929162-85929181 | Msa0896200:five_prime_UTR | 35.0% | |
| ! | GGATTTTACCAATGTGGATG+TGG | + | chr6_1:85922498-85922517 | None:intergenic | 40.0% |
| CAGCGGAAAAATAGAGGAAT+TGG | + | chr6_1:85922543-85922562 | None:intergenic | 40.0% | |
| AGGAAACAGCGGAAAAATAG+AGG | + | chr6_1:85922549-85922568 | None:intergenic | 40.0% | |
| AAAAGAGCGGGAAAATGAAG+GGG | + | chr6_1:85922588-85922607 | None:intergenic | 40.0% | |
| GAAAAGAGCGGGAAAATGAA+GGG | + | chr6_1:85922589-85922608 | None:intergenic | 40.0% | |
| GGTGATTTAAGGAAAAGAGC+GGG | + | chr6_1:85922600-85922619 | None:intergenic | 40.0% | |
| GGGTGATTTAAGGAAAAGAG+CGG | + | chr6_1:85922601-85922620 | None:intergenic | 40.0% | |
| !! | GGTTGAGTTGAGTTGAGTTT+GGG | + | chr6_1:85922621-85922640 | None:intergenic | 40.0% |
| TTCATCAAGAACAAGATCGG+TGG | + | chr6_1:85922793-85922812 | None:intergenic | 40.0% | |
| TGTTCTTGATGAACTCGAAC+AGG | - | chr6_1:85922800-85922819 | Msa0896200:three_prime_UTR | 40.0% | |
| ACAGCGTCATGAAATTGAAC+CGG | + | chr6_1:85922855-85922874 | None:intergenic | 40.0% | |
| ! | CTTAAAGGGCCTGTTTGTTT+TGG | + | chr6_1:85923521-85923540 | None:intergenic | 40.0% |
| GAAATCTGCGATAATCGATG+TGG | - | chr6_1:85924037-85924056 | Msa0896200:intron | 40.0% | |
| AAGTGTCAGTGTATCTGTGT+TGG | - | chr6_1:85924395-85924414 | Msa0896200:CDS | 40.0% | |
| ! | GTGTTGGTCCTTCACATATT+AGG | - | chr6_1:85924411-85924430 | Msa0896200:CDS | 40.0% |
| ATTACCTATGAAAGGAGCCA+AGG | - | chr6_1:85924490-85924509 | Msa0896200:intron | 40.0% | |
| GCTCAAGTTTCATTGGACTT+TGG | - | chr6_1:85924572-85924591 | Msa0896200:CDS | 40.0% | |
| !! | GGACTTTGGAGTTCTTTGAT+TGG | - | chr6_1:85924586-85924605 | Msa0896200:CDS | 40.0% |
| !!! | CTACTAGCTTTTGTGGTTGA+TGG | - | chr6_1:85924630-85924649 | Msa0896200:CDS | 40.0% |
| ! | TTGTGTTGGCCATTCATACT+TGG | - | chr6_1:85924975-85924994 | Msa0896200:intron | 40.0% |
| TTGGCCATTCATACTTGGAT+TGG | - | chr6_1:85924980-85924999 | Msa0896200:intron | 40.0% | |
| !! | TGTTTTTATTCCAGACACCC+AGG | - | chr6_1:85925042-85925061 | Msa0896200:intron | 40.0% |
| ! | CTATACAGAGCAGATTTTGC+TGG | + | chr6_1:85925093-85925112 | None:intergenic | 40.0% |
| AGTCCGAACTTTCACAATTC+CGG | - | chr6_1:85925178-85925197 | Msa0896200:intron | 40.0% | |
| ACTCCGGAATTGTGAAAGTT+CGG | + | chr6_1:85925184-85925203 | None:intergenic | 40.0% | |
| GATATCTCCTATTCAATCCC+TGG | - | chr6_1:85925346-85925365 | Msa0896200:intron | 40.0% | |
| AATGGGAGTAATATCTCAGC+TGG | - | chr6_1:85925394-85925413 | Msa0896200:intron | 40.0% | |
| !! | TGATTTCAACAGAAGCGCTA+AGG | + | chr6_1:85925445-85925464 | None:intergenic | 40.0% |
| ! | GTTCTCTAAGAAGAATCCTG+TGG | + | chr6_1:85925961-85925980 | None:intergenic | 40.0% |
| GGCAAATATCACGAAGGAAA+TGG | + | chr6_1:85926042-85926061 | None:intergenic | 40.0% | |
| GAAGTTATACAACTTGCGAG+TGG | + | chr6_1:85926155-85926174 | None:intergenic | 40.0% | |
| ! | CGTCTGTCAAAGGCATAATT+CGG | + | chr6_1:85926367-85926386 | None:intergenic | 40.0% |
| AATGGATAAGTAGACCTGCT+TGG | - | chr6_1:85926501-85926520 | Msa0896200:CDS | 40.0% | |
| ATGGATAAGTAGACCTGCTT+GGG | - | chr6_1:85926502-85926521 | Msa0896200:CDS | 40.0% | |
| ! | TTAACCTCAGAGTACCAAGT+TGG | + | chr6_1:85926576-85926595 | None:intergenic | 40.0% |
| ! | TTGTGAGTGGCTCATTTTAC+CGG | - | chr6_1:85926964-85926983 | Msa0896200:intron | 40.0% |
| TGAAGTGACAATGCACAAAC+CGG | + | chr6_1:85926986-85927005 | None:intergenic | 40.0% | |
| GATATATCTCTATCCTCCAG+TGG | + | chr6_1:85927063-85927082 | None:intergenic | 40.0% | |
| ATATCACTTCAAGTGCTTGC+GGG | - | chr6_1:85927078-85927097 | Msa0896200:intron | 40.0% | |
| !!! | CTTGCGGGACATGATTTTTT+TGG | - | chr6_1:85927093-85927112 | Msa0896200:intron | 40.0% |
| !!! | GGACATGATTTTTTTGGTGG+TGG | - | chr6_1:85927099-85927118 | Msa0896200:intron | 40.0% |
| TTTCCTTTCCTTTGTCACGT+TGG | - | chr6_1:85927349-85927368 | Msa0896200:intron | 40.0% | |
| ATACCAACGTGACAAAGGAA+AGG | + | chr6_1:85927355-85927374 | None:intergenic | 40.0% | |
| !!! | TCTTGATGGTTTTGAGAGTG+TGG | - | chr6_1:85927442-85927461 | Msa0896200:intron | 40.0% |
| GATTCATATGACAACACCAG+TGG | + | chr6_1:85927560-85927579 | None:intergenic | 40.0% | |
| ACTCATCGCCTAATGTGATT+TGG | + | chr6_1:85927616-85927635 | None:intergenic | 40.0% | |
| TTGATATGCAGGTCGCAATT+TGG | - | chr6_1:85927715-85927734 | Msa0896200:intron | 40.0% | |
| ! | AGTTCTCTTTTAACCGTGGA+CGG | + | chr6_1:85927765-85927784 | None:intergenic | 40.0% |
| TGTTATATAGCTGATCCTGG+CGG | + | chr6_1:85928152-85928171 | None:intergenic | 40.0% | |
| GCATGTTATATAGCTGATCC+TGG | + | chr6_1:85928155-85928174 | None:intergenic | 40.0% | |
| TCAACAGTTTCTGTCTCAGA+AGG | + | chr6_1:85928198-85928217 | None:intergenic | 40.0% | |
| !! | ATGACTTTGATGGGTTATGG+TGG | + | chr6_1:85928335-85928354 | None:intergenic | 40.0% |
| !! | GAGATGACTTTGATGGGTTA+TGG | + | chr6_1:85928338-85928357 | None:intergenic | 40.0% |
| TGGACAGAGATGACTTTGAT+GGG | + | chr6_1:85928344-85928363 | None:intergenic | 40.0% | |
| ! | TGTTGTTTAGTTAGAGGGAG+TGG | + | chr6_1:85928364-85928383 | None:intergenic | 40.0% |
| CGGAGTTGGATATAGATGAA+GGG | + | chr6_1:85928413-85928432 | None:intergenic | 40.0% | |
| GTTGTGATTGCAGATAGTCT+TGG | - | chr6_1:85928662-85928681 | Msa0896200:intron | 40.0% | |
| GTGTACTTAAATGCCTTCTG+CGG | + | chr6_1:85928699-85928718 | None:intergenic | 40.0% | |
| !! | CAGAAGGCATTTAAGTACAC+AGG | - | chr6_1:85928699-85928718 | Msa0896200:intron | 40.0% |
| AATTCAACTTCCTGAGAGCA+AGG | + | chr6_1:85928783-85928802 | None:intergenic | 40.0% | |
| ATACTAGGCAATGAATGGAG+TGG | - | chr6_1:85928902-85928921 | Msa0896200:CDS | 40.0% | |
| GGAAAAGAGCGGGAAAATGA+AGG | + | chr6_1:85922590-85922609 | None:intergenic | 45.0% | |
| !! | GGGTTGAGTTGAGTTGAGTT+TGG | + | chr6_1:85922622-85922641 | None:intergenic | 45.0% |
| AGGATTTCGTCAAGTGCTTC+GGG | + | chr6_1:85922726-85922745 | None:intergenic | 45.0% | |
| GAGGATTTCGTCAAGTGCTT+CGG | + | chr6_1:85922727-85922746 | None:intergenic | 45.0% | |
| CAAAGCGAGTAACGAAAGAG+AGG | + | chr6_1:85922746-85922765 | None:intergenic | 45.0% | |
| GGTGGCTTCATCTTCTTCTT+CGG | + | chr6_1:85922775-85922794 | None:intergenic | 45.0% | |
| TCTCTCTCTCTTAGGGTTTC+CGG | - | chr6_1:85922833-85922852 | Msa0896200:three_prime_UTR | 45.0% | |
| TGCGATAATCGATGTGGAAC+CGG | - | chr6_1:85924043-85924062 | Msa0896200:intron | 45.0% | |
| !! | AACTTGCTATTGCAAGCCGA+TGG | - | chr6_1:85924080-85924099 | Msa0896200:intron | 45.0% |
| !! | ACTTGCTATTGCAAGCCGAT+GGG | - | chr6_1:85924081-85924100 | Msa0896200:intron | 45.0% |
| ACTTCCTTGGCTCCTTTCAT+AGG | + | chr6_1:85924497-85924516 | None:intergenic | 45.0% | |
| ! | ACAGAGCAGATTTTGCTGGT+GGG | + | chr6_1:85925089-85925108 | None:intergenic | 45.0% |
| ! | TACAGAGCAGATTTTGCTGG+TGG | + | chr6_1:85925090-85925109 | None:intergenic | 45.0% |
| ! | CTCGCCATCAGGATTTTTCA+AGG | - | chr6_1:85925145-85925164 | Msa0896200:intron | 45.0% |
| !! | CTGGCCTTGAAAAATCCTGA+TGG | + | chr6_1:85925152-85925171 | None:intergenic | 45.0% |
| GAAAGTTCGGACTCAAAAGC+TGG | + | chr6_1:85925171-85925190 | None:intergenic | 45.0% | |
| TTCACAATTCCGGAGTTGTG+AGG | - | chr6_1:85925188-85925207 | Msa0896200:intron | 45.0% | |
| TCTCCTATTCAATCCCTGGT+TGG | - | chr6_1:85925350-85925369 | Msa0896200:intron | 45.0% | |
| CTCCTATTCAATCCCTGGTT+GGG | - | chr6_1:85925351-85925370 | Msa0896200:intron | 45.0% | |
| TTGGGCGAAAAGGTAGAAGA+TGG | - | chr6_1:85925369-85925388 | Msa0896200:intron | 45.0% | |
| TGGGCGAAAAGGTAGAAGAT+GGG | - | chr6_1:85925370-85925389 | Msa0896200:intron | 45.0% | |
| GTAATATCTCAGCTGGAGGA+TGG | - | chr6_1:85925401-85925420 | Msa0896200:intron | 45.0% | |
| TGCCTGAAATGTACCAAGTC+AGG | - | chr6_1:85925684-85925703 | Msa0896200:CDS | 45.0% | |
| GCCTGAAATGTACCAAGTCA+GGG | - | chr6_1:85925685-85925704 | Msa0896200:CDS | 45.0% | |
| !! | TCCCTGACTTGGTACATTTC+AGG | + | chr6_1:85925689-85925708 | None:intergenic | 45.0% |
| GAAATGTACCAAGTCAGGGA+TGG | - | chr6_1:85925689-85925708 | Msa0896200:CDS | 45.0% | |
| TAATCCTACCATCCCTGACT+TGG | + | chr6_1:85925700-85925719 | None:intergenic | 45.0% | |
| AAGTCAGGGATGGTAGGATT+AGG | - | chr6_1:85925699-85925718 | Msa0896200:CDS | 45.0% | |
| AACACTATAGTTGTGGCCGA+AGG | - | chr6_1:85925978-85925997 | Msa0896200:intron | 45.0% | |
| ACATGGGGCAAATATCACGA+AGG | + | chr6_1:85926048-85926067 | None:intergenic | 45.0% | |
| ! | TAAGGGCATGCACAGTATGT+AGG | + | chr6_1:85926314-85926333 | None:intergenic | 45.0% |
| CAACATCTTGCGTCTGTCAA+AGG | + | chr6_1:85926377-85926396 | None:intergenic | 45.0% | |
| CATCCTGTGTGCTAACCATT+AGG | - | chr6_1:85926605-85926624 | Msa0896200:CDS | 45.0% | |
| TGACCTAATGGTTAGCACAC+AGG | + | chr6_1:85926611-85926630 | None:intergenic | 45.0% | |
| GTGTGCTAACCATTAGGTCA+AGG | - | chr6_1:85926611-85926630 | Msa0896200:CDS | 45.0% | |
| CAACATGAGCCTTGACCTAA+TGG | + | chr6_1:85926623-85926642 | None:intergenic | 45.0% | |
| ATATCTCTATCCTCCAGTGG+AGG | + | chr6_1:85927060-85927079 | None:intergenic | 45.0% | |
| !!! | GCGGGACATGATTTTTTTGG+TGG | - | chr6_1:85927096-85927115 | Msa0896200:intron | 45.0% |
| GCTTGCCTGATCTATTGCAT+AGG | + | chr6_1:85927233-85927252 | None:intergenic | 45.0% | |
| ATAGATCAGGCAAGCAGAGA+TGG | - | chr6_1:85927238-85927257 | Msa0896200:intron | 45.0% | |
| GCTGCACACCAAATCACATT+AGG | - | chr6_1:85927605-85927624 | Msa0896200:CDS | 45.0% | |
| AGGTCGCAATTTGGCAAACT+AGG | - | chr6_1:85927724-85927743 | Msa0896200:intron | 45.0% | |
| AAATTATTGCTGCCCGTCCA+CGG | - | chr6_1:85927749-85927768 | Msa0896200:intron | 45.0% | |
| ! | GTTCTCTTTTAACCGTGGAC+GGG | + | chr6_1:85927764-85927783 | None:intergenic | 45.0% |
| ! | CGACAGTTCTCTTTTAACCG+TGG | + | chr6_1:85927769-85927788 | None:intergenic | 45.0% |
| AATTCAATACCTGCATCGCC+AGG | + | chr6_1:85927811-85927830 | None:intergenic | 45.0% | |
| TATTTAGGCAGAGCACACCT+TGG | + | chr6_1:85927917-85927936 | None:intergenic | 45.0% | |
| ACAGTTTCTGTCTCAGAAGG+TGG | + | chr6_1:85928195-85928214 | None:intergenic | 45.0% | |
| GTGGACAGAGATGACTTTGA+TGG | + | chr6_1:85928345-85928364 | None:intergenic | 45.0% | |
| GCGGAGTTGGATATAGATGA+AGG | + | chr6_1:85928414-85928433 | None:intergenic | 45.0% | |
| TCTATATCCAACTCCGCACA+CGG | - | chr6_1:85928417-85928436 | Msa0896200:intron | 45.0% | |
| GGTATTAACAGTACCGTGTG+CGG | + | chr6_1:85928433-85928452 | None:intergenic | 45.0% | |
| ATTCTTCAAGACTCGGACCT+TGG | - | chr6_1:85928616-85928635 | Msa0896200:intron | 45.0% | |
| ! | ATTTACCTTTTCCTCCTGGG+AGG | - | chr6_1:85928935-85928954 | Msa0896200:CDS | 45.0% |
| ! | TTTACCTTTTCCTCCTGGGA+GGG | - | chr6_1:85928936-85928955 | Msa0896200:CDS | 45.0% |
| !!! | ATTAAGAAAAAAATAAATTT+TGG | - | chr6_1:85923351-85923370 | Msa0896200:CDS | 5.0% |
| AAGTTCAGCACTCGTTGCAC+CGG | + | chr6_1:85924065-85924084 | None:intergenic | 50.0% | |
| !! | CTTGCTATTGCAAGCCGATG+GGG | - | chr6_1:85924082-85924101 | Msa0896200:intron | 50.0% |
| AGTAATTTCCTCCGCCCCAT+CGG | + | chr6_1:85924099-85924118 | None:intergenic | 50.0% | |
| TCCTCCTCTTCTTCAGCCAT+TGG | - | chr6_1:85924131-85924150 | Msa0896200:intron | 50.0% | |
| ACCAATGGCTGAAGAAGAGG+AGG | + | chr6_1:85924135-85924154 | None:intergenic | 50.0% | |
| GACACCAATGGCTGAAGAAG+AGG | + | chr6_1:85924138-85924157 | None:intergenic | 50.0% | |
| CAAGACGAGGTAAGCTTCCT+GGG | + | chr6_1:85925062-85925081 | None:intergenic | 50.0% | |
| CAGGAAGCTTACCTCGTCTT+GGG | - | chr6_1:85925061-85925080 | Msa0896200:intron | 50.0% | |
| AGGAAGCTTACCTCGTCTTG+GGG | - | chr6_1:85925062-85925081 | Msa0896200:intron | 50.0% | |
| ! | CTGATGGCGAGAAAGCCTTT+GGG | + | chr6_1:85925136-85925155 | None:intergenic | 50.0% |
| ! | TCTACCTTTTCGCCCAACCA+GGG | + | chr6_1:85925366-85925385 | None:intergenic | 50.0% |
| ! | TTCTACCTTTTCGCCCAACC+AGG | + | chr6_1:85925367-85925386 | None:intergenic | 50.0% |
| GGGAGTAATATCTCAGCTGG+AGG | - | chr6_1:85925397-85925416 | Msa0896200:intron | 50.0% | |
| TGTACCAAGTCAGGGATGGT+AGG | - | chr6_1:85925693-85925712 | Msa0896200:CDS | 50.0% | |
| !!! | GCTTGCAGAGGGCATTTTTC+AGG | - | chr6_1:85926007-85926026 | Msa0896200:intron | 50.0% |
| TGCGAGTGGAGTGAACTTCA+TGG | + | chr6_1:85926141-85926160 | None:intergenic | 50.0% | |
| TAGCGTCATTCCACACCCAT+AGG | + | chr6_1:85926447-85926466 | None:intergenic | 50.0% | |
| TAGACCTGCTTGGGTTCAGA+AGG | - | chr6_1:85926511-85926530 | Msa0896200:CDS | 50.0% | |
| CTTTCCTTCTGAACCCAAGC+AGG | + | chr6_1:85926518-85926537 | None:intergenic | 50.0% | |
| GGATCCAACTTGGTACTCTG+AGG | - | chr6_1:85926569-85926588 | Msa0896200:CDS | 50.0% | |
| TACATGTGGGTTTCCTCCAC+TGG | - | chr6_1:85927044-85927063 | Msa0896200:intron | 50.0% | |
| !!! | TGGTTTTGAGAGTGTGGACG+TGG | - | chr6_1:85927448-85927467 | Msa0896200:intron | 50.0% |
| AGGTAAGCTTCCTGGGTGTC+TGG | + | chr6_1:85925055-85925074 | None:intergenic | 55.0% | |
| CCAAGACGAGGTAAGCTTCC+TGG | + | chr6_1:85925063-85925082 | None:intergenic | 55.0% | |
| CCAGGAAGCTTACCTCGTCT+TGG | - | chr6_1:85925060-85925079 | Msa0896200:intron | 55.0% | |
| ! | CCTGATGGCGAGAAAGCCTT+TGG | + | chr6_1:85925137-85925156 | None:intergenic | 55.0% |
| CCAAAGGCTTTCTCGCCATC+AGG | - | chr6_1:85925134-85925153 | Msa0896200:intron | 55.0% | |
| CCAGCAGTACCTCACAACTC+CGG | + | chr6_1:85925200-85925219 | None:intergenic | 55.0% | |
| CGCCCAACCAGGGATTGAAT+AGG | + | chr6_1:85925356-85925375 | None:intergenic | 55.0% | |
| CAATCCCTGGTTGGGCGAAA+AGG | - | chr6_1:85925359-85925378 | Msa0896200:intron | 55.0% | |
| CTCTGCAAGCATCTCGCCTT+CGG | + | chr6_1:85925997-85926016 | None:intergenic | 55.0% | |
| GAAGGCGAGATGCTTGCAGA+GGG | - | chr6_1:85925996-85926015 | Msa0896200:intron | 55.0% | |
| !! | TTCTGAGGTGCCTATGGGTG+TGG | - | chr6_1:85926434-85926453 | Msa0896200:intron | 55.0% |
| ATGTGGGTTTCCTCCACTGG+AGG | - | chr6_1:85927047-85927066 | Msa0896200:intron | 55.0% | |
| AAGCCTAAGGTGAGCTCCAC+TGG | - | chr6_1:85927541-85927560 | Msa0896200:CDS | 55.0% | |
| ACACCAGTGGAGCTCACCTT+AGG | + | chr6_1:85927547-85927566 | None:intergenic | 55.0% | |
| CAGGCTCAACAGCTCTTCCA+AGG | - | chr6_1:85927897-85927916 | Msa0896200:intron | 55.0% | |
| AACAGTACCGTGTGCGGAGT+TGG | + | chr6_1:85928427-85928446 | None:intergenic | 55.0% | |
| CAACTTCCTGAGAGCAAGGC+CGG | + | chr6_1:85928779-85928798 | None:intergenic | 55.0% | |
| TCAACCCTCCCAGGAGGAAA+AGG | + | chr6_1:85928943-85928962 | None:intergenic | 55.0% | |
| GATGTGTCTTCAACCCTCCC+AGG | + | chr6_1:85928952-85928971 | None:intergenic | 55.0% | |
| GCTATTGCAAGCCGATGGGG+CGG | - | chr6_1:85924085-85924104 | Msa0896200:intron | 60.0% | |
| !! | CCGGAGTTGTGAGGTACTGC+TGG | - | chr6_1:85925197-85925216 | Msa0896200:intron | 60.0% |
| CGAAGGCGAGATGCTTGCAG+AGG | - | chr6_1:85925995-85926014 | Msa0896200:intron | 60.0% | |
| ATTCCTGGTCCTGGCGATGC+AGG | - | chr6_1:85927799-85927818 | Msa0896200:intron | 60.0% | |
| ATACCTGCATCGCCAGGACC+AGG | + | chr6_1:85927805-85927824 | None:intergenic | 60.0% | |
| GGGAGACAGAAGTCCGCAGA+AGG | - | chr6_1:85928683-85928702 | Msa0896200:intron | 60.0% | |
| ! | AGTGTACCGGCCTTGCTCTC+AGG | - | chr6_1:85928770-85928789 | Msa0896200:intron | 60.0% |
| GTGTCTTCAACCCTCCCAGG+AGG | + | chr6_1:85928949-85928968 | None:intergenic | 60.0% | |
| ATTGCAAGCCGATGGGGCGG+AGG | - | chr6_1:85924088-85924107 | Msa0896200:intron | 65.0% | |
| ! | GCTGGTGGGTCCCCAAGACG+AGG | + | chr6_1:85925075-85925094 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_1 | gene | 85922494 | 85929211 | 85922494 | ID=Msa0896200;Name=Msa0896200 |
| chr6_1 | mRNA | 85922494 | 85929211 | 85922494 | ID=Msa0896200-mRNA-1;Parent=Msa0896200;Name=Msa0896200-mRNA-1;_AED=0.09;_eAED=0.09;_QI=166|0.91|0.84|1|1|1|13|396|521 |
| chr6_1 | exon | 85922494 | 85923030 | 85922494 | ID=Msa0896200-mRNA-1:exon:14489;Parent=Msa0896200-mRNA-1 |
| chr6_1 | exon | 85923267 | 85923380 | 85923267 | ID=Msa0896200-mRNA-1:exon:14488;Parent=Msa0896200-mRNA-1 |
| chr6_1 | exon | 85923475 | 85923589 | 85923475 | ID=Msa0896200-mRNA-1:exon:14487;Parent=Msa0896200-mRNA-1 |
| chr6_1 | exon | 85923709 | 85923805 | 85923709 | ID=Msa0896200-mRNA-1:exon:14486;Parent=Msa0896200-mRNA-1 |
| chr6_1 | exon | 85923885 | 85923979 | 85923885 | ID=Msa0896200-mRNA-1:exon:14485;Parent=Msa0896200-mRNA-1 |
| chr6_1 | exon | 85924156 | 85924286 | 85924156 | ID=Msa0896200-mRNA-1:exon:14484;Parent=Msa0896200-mRNA-1 |
| chr6_1 | exon | 85924383 | 85924463 | 85924383 | ID=Msa0896200-mRNA-1:exon:14483;Parent=Msa0896200-mRNA-1 |
| chr6_1 | exon | 85924562 | 85924666 | 85924562 | ID=Msa0896200-mRNA-1:exon:14482;Parent=Msa0896200-mRNA-1 |
| chr6_1 | exon | 85925677 | 85925751 | 85925677 | ID=Msa0896200-mRNA-1:exon:14481;Parent=Msa0896200-mRNA-1 |
| chr6_1 | exon | 85926251 | 85926358 | 85926251 | ID=Msa0896200-mRNA-1:exon:14480;Parent=Msa0896200-mRNA-1 |
| chr6_1 | exon | 85926496 | 85926649 | 85926496 | ID=Msa0896200-mRNA-1:exon:14479;Parent=Msa0896200-mRNA-1 |
| chr6_1 | exon | 85927489 | 85927669 | 85927489 | ID=Msa0896200-mRNA-1:exon:14478;Parent=Msa0896200-mRNA-1 |
| chr6_1 | exon | 85928877 | 85929211 | 85928877 | ID=Msa0896200-mRNA-1:exon:14477;Parent=Msa0896200-mRNA-1 |
| chr6_1 | five_prime_UTR | 85929046 | 85929211 | 85929046 | ID=Msa0896200-mRNA-1:five_prime_utr;Parent=Msa0896200-mRNA-1 |
| chr6_1 | CDS | 85928877 | 85929045 | 85928877 | ID=Msa0896200-mRNA-1:cds;Parent=Msa0896200-mRNA-1 |
| chr6_1 | CDS | 85927489 | 85927669 | 85927489 | ID=Msa0896200-mRNA-1:cds;Parent=Msa0896200-mRNA-1 |
| chr6_1 | CDS | 85926496 | 85926649 | 85926496 | ID=Msa0896200-mRNA-1:cds;Parent=Msa0896200-mRNA-1 |
| chr6_1 | CDS | 85926251 | 85926358 | 85926251 | ID=Msa0896200-mRNA-1:cds;Parent=Msa0896200-mRNA-1 |
| chr6_1 | CDS | 85925677 | 85925751 | 85925677 | ID=Msa0896200-mRNA-1:cds;Parent=Msa0896200-mRNA-1 |
| chr6_1 | CDS | 85924562 | 85924666 | 85924562 | ID=Msa0896200-mRNA-1:cds;Parent=Msa0896200-mRNA-1 |
| chr6_1 | CDS | 85924383 | 85924463 | 85924383 | ID=Msa0896200-mRNA-1:cds;Parent=Msa0896200-mRNA-1 |
| chr6_1 | CDS | 85924156 | 85924286 | 85924156 | ID=Msa0896200-mRNA-1:cds;Parent=Msa0896200-mRNA-1 |
| chr6_1 | CDS | 85923885 | 85923979 | 85923885 | ID=Msa0896200-mRNA-1:cds;Parent=Msa0896200-mRNA-1 |
| chr6_1 | CDS | 85923709 | 85923805 | 85923709 | ID=Msa0896200-mRNA-1:cds;Parent=Msa0896200-mRNA-1 |
| chr6_1 | CDS | 85923475 | 85923589 | 85923475 | ID=Msa0896200-mRNA-1:cds;Parent=Msa0896200-mRNA-1 |
| chr6_1 | CDS | 85923267 | 85923380 | 85923267 | ID=Msa0896200-mRNA-1:cds;Parent=Msa0896200-mRNA-1 |
| chr6_1 | CDS | 85922890 | 85923030 | 85922890 | ID=Msa0896200-mRNA-1:cds;Parent=Msa0896200-mRNA-1 |
| chr6_1 | three_prime_UTR | 85922494 | 85922889 | 85922494 | ID=Msa0896200-mRNA-1:three_prime_utr;Parent=Msa0896200-mRNA-1 |
| Gene Sequence |
| Protein sequence |
