AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0896700

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0896700 MtrunA17_Chr6g0481711 98.225 338 6 0 1 338 1 338 0.0 675
Msa0896700 MtrunA17_Chr1g0164221 42.353 340 146 10 22 338 39 351 3.32e-65 209
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0896700 AT5G23130.1 41.593 339 164 8 24 338 69 397 5.97e-67 216
Msa0896700 AT5G08200.1 42.690 342 160 10 24 338 77 409 1.28e-60 199

Find 126 sgRNAs with CRISPR-Local

Find 258 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTTCTTTGAAAAGCCTTTC+TGG 0.094697 6_1:-87405460 None:intergenic
TCTAATGTTACAATAATTTA+TGG 0.099287 6_1:+87406015 Msa0896700:three_prime_UTR
TTTCCAGAGTCTTCAGATTC+AGG 0.207293 6_1:+87405568 Msa0896700:CDS
TTACTTCTGCGTCCGGTTAT+TGG 0.217215 6_1:-87405760 None:intergenic
AACATGTTTACAAATTTAAA+TGG 0.253054 6_1:-87406227 None:intergenic
GGAAGTGGTGGTGGTGTTAA+TGG 0.256844 6_1:+87403038 Msa0896700:CDS
TCCATAGTATTTCTGTAAAA+TGG 0.270806 6_1:-87405155 None:intergenic
CTTATAGTACTCAATTAAAT+TGG 0.271672 6_1:+87406278 Msa0896700:three_prime_UTR
TTTGGAATCGGTGAGGGTTT+TGG 0.272650 6_1:-87405271 None:intergenic
TATTTCAGGCCTAGGATTAA+AGG 0.275335 6_1:+87405911 Msa0896700:three_prime_UTR
TACTTCTGCGTCCGGTTATT+GGG 0.285217 6_1:-87405759 None:intergenic
ATATTTGTCGATGGACTATC+TGG 0.294447 6_1:+87405628 Msa0896700:CDS
GCTGGTGTTGCTATTAAGTA+TGG 0.294458 6_1:+87403110 Msa0896700:CDS
AAATGAAAGAAAGTTGAAAT+TGG 0.301435 6_1:-87402834 None:intergenic
ATTGACTTGGAAGATGAAAT+TGG 0.308146 6_1:-87402925 None:intergenic
ATTTCCAAGCCTATCTTTGA+TGG 0.314683 6_1:+87405727 Msa0896700:CDS
AGAAGGTTAGTTATGGTTCT+TGG 0.316713 6_1:-87402780 None:intergenic
TGCACCCTCATGAATCAATA+AGG 0.323208 6_1:-87406312 None:intergenic
GAGTAGATGTCGCCGTCAAA+TGG 0.336980 6_1:+87402999 Msa0896700:exon
TTTGACATTTCAACTCTTCC+CGG 0.346744 6_1:+87405833 Msa0896700:three_prime_UTR
CTCTGACACTTCATCGTTCC+CGG 0.350907 6_1:-87405335 None:intergenic
TCAAAATTTGATACTCTTGC+TGG 0.351874 6_1:+87403092 Msa0896700:CDS
GGTGGTGGTGTTAATGGAAA+TGG 0.365404 6_1:+87403044 Msa0896700:CDS
TTTAGGCGGTTTCAGTCTTA+AGG 0.369271 6_1:-87405110 None:intergenic
AATGTAAAACTAGTTCTGTT+TGG 0.370033 6_1:+87405797 Msa0896700:exon
ATTTCAGGCCTAGGATTAAA+GGG 0.372531 6_1:+87405912 Msa0896700:three_prime_UTR
CATCGCAGATTGACCATTGC+GGG 0.373731 6_1:-87405071 None:intergenic
ACGCGTAGGATATTTATTTC+AGG 0.383805 6_1:+87405897 Msa0896700:three_prime_UTR
GTTGACTTGGAATGATTGTT+TGG 0.388681 6_1:-87405289 None:intergenic
AGGATATTTATTTCAGGCCT+AGG 0.388888 6_1:+87405903 Msa0896700:three_prime_UTR
GCTGGAGAAATCTTCTGTTT+AGG 0.392089 6_1:-87405127 None:intergenic
TCAACTCTTCCCGGTTTAAC+CGG 0.393377 6_1:+87405842 Msa0896700:three_prime_UTR
GAGGAAAAGATGCATGAAAA+AGG 0.396010 6_1:+87405978 Msa0896700:three_prime_UTR
CTCAACTTGGCAGGTTCATC+AGG 0.397580 6_1:-87404309 None:intergenic
GATTCTATTTCAGTAGGGTT+AGG 0.405727 6_1:+87405598 Msa0896700:CDS
TTGTGTAACGGCGGTGGAAG+TGG 0.408568 6_1:+87403023 Msa0896700:CDS
TAAATCTGGAGAAACAGAAT+TGG 0.410471 6_1:+87405201 Msa0896700:CDS
TCAAATTCCAGAGATAAATC+TGG 0.414692 6_1:+87405187 Msa0896700:CDS
CATCAATCCCCTTTAATCCT+AGG 0.425884 6_1:-87405920 None:intergenic
ATGAAGAAGAAGGTTAGTTA+TGG 0.426037 6_1:-87402787 None:intergenic
GGCTTACCTATCCCAATAAC+CGG 0.430253 6_1:+87405748 Msa0896700:CDS
CTTTGTTGTCGGTGGTTGAT+CGG 0.442037 6_1:+87402977 Msa0896700:five_prime_UTR
GAGGCTCGACTAGCTGATTT+CGG 0.445112 6_1:-87405541 None:intergenic
TACAGTATATGTATATAGTC+TGG 0.445242 6_1:-87406201 None:intergenic
TGTTTCTCCAGATTTATCTC+TGG 0.446147 6_1:-87405194 None:intergenic
AAACGGTAAATTTGTTGACT+TGG 0.448318 6_1:-87405302 None:intergenic
CCGTTACACAACCCATTTGA+CGG 0.449242 6_1:-87403011 None:intergenic
TGGTTAGATTCTATTTCAGT+AGG 0.459978 6_1:+87405592 Msa0896700:CDS
TCAAACGGTTCTTCCTCCTC+TGG 0.464960 6_1:+87405499 Msa0896700:CDS
TTCTGTAAAATGGTCATGGC+TGG 0.465821 6_1:-87405145 None:intergenic
CGCATCAAGCCTCAGAGAGC+AGG 0.468330 6_1:+87405669 Msa0896700:CDS
CTGCGTCCGGTTATTGGGAT+AGG 0.474919 6_1:-87405754 None:intergenic
AACGGCGGTGGAAGTGGTGG+TGG 0.476041 6_1:+87403029 Msa0896700:CDS
AGATCTTAGATCTTTGTTGT+CGG 0.480237 6_1:+87402966 Msa0896700:five_prime_UTR
GTGGTGGTGTTAATGGAAAT+GGG 0.482573 6_1:+87403045 Msa0896700:CDS
GCGGTTTCAGTCTTAAGGAC+TGG 0.485745 6_1:-87405105 None:intergenic
CAATGGTCAATCTGCGATGA+AGG 0.488360 6_1:+87405075 Msa0896700:CDS
AGTAGATGTCGCCGTCAAAT+GGG 0.488361 6_1:+87403000 Msa0896700:exon
ATCAAAGATAGGCTTGGAAA+TGG 0.491161 6_1:-87405725 None:intergenic
ATAGGTAAGCCATCAAAGAT+AGG 0.491484 6_1:-87405736 None:intergenic
AATAATAGTAATGGATCAAA+CGG 0.495952 6_1:+87405484 Msa0896700:CDS
TTGGAATGATTGTTTGGAAT+CGG 0.496973 6_1:-87405283 None:intergenic
ACTAGCTGATTTCGGCCTCA+TGG 0.499547 6_1:-87405533 None:intergenic
TTCAGGTAGCTGATGTCAAA+AGG 0.500223 6_1:+87404199 Msa0896700:intron
TTGGCAGGTTCATCAGGAAC+CGG 0.501174 6_1:-87404303 None:intergenic
AAAGAAGGTAATAATAGTAA+TGG 0.503990 6_1:+87405475 Msa0896700:CDS
CATCCTGAATCTGAAGACTC+TGG 0.504861 6_1:-87405571 None:intergenic
TTACCGTTTGATCTACTGAC+CGG 0.505272 6_1:+87405316 Msa0896700:CDS
GCACCCTCATGAATCAATAA+GGG 0.506832 6_1:-87406311 None:intergenic
GGTGGATGTCGTCCTGGTAG+TGG 0.510860 6_1:-87404276 None:intergenic
GCTGATGTCAAAAGGATGAA+TGG 0.521510 6_1:+87404207 Msa0896700:CDS
TGATGATCTCACAAAGAGAA+AGG 0.525475 6_1:+87405938 Msa0896700:three_prime_UTR
TAAGCCATCAAAGATAGGCT+TGG 0.528345 6_1:-87405731 None:intergenic
AATGGGTTGTGTAACGGCGG+TGG 0.528725 6_1:+87403017 Msa0896700:CDS
TCTTAGATCTTTGTTGTCGG+TGG 0.529819 6_1:+87402969 Msa0896700:five_prime_UTR
TGATTGTTTGGAATCGGTGA+GGG 0.531894 6_1:-87405277 None:intergenic
CCGTCAAATGGGTTGTGTAA+CGG 0.532025 6_1:+87403011 Msa0896700:CDS
TGATAGTACCTCAACTTGGC+AGG 0.533304 6_1:-87404318 None:intergenic
TGTCAAAAGGATGAATGGTT+TGG 0.533587 6_1:+87404212 Msa0896700:CDS
AACTCTTATATTCATAAATG+TGG 0.534507 6_1:-87406044 None:intergenic
GGAGATTCAATATTTGTCGA+TGG 0.534567 6_1:+87405619 Msa0896700:CDS
TTTGGATAAAGTAAGCAAAA+GGG 0.536683 6_1:-87402886 None:intergenic
TTCCCGGTCAGTAGATCAAA+CGG 0.540608 6_1:-87405319 None:intergenic
AAGATAGGCTTGGAAATGGT+TGG 0.541213 6_1:-87405721 None:intergenic
AATTTGTAAACATGTTACAT+TGG 0.550776 6_1:+87406234 Msa0896700:three_prime_UTR
AGGACGACATCCACCGTCTC+CGG 0.552316 6_1:+87404284 Msa0896700:CDS
TGCTATTAAGTATGGTGTTG+AGG 0.554210 6_1:+87403118 Msa0896700:CDS
TACACCCTTATTGATTCATG+AGG 0.555385 6_1:+87406307 Msa0896700:three_prime_UTR
CAGATCATTCCAGAGACGAC+TGG 0.557456 6_1:+87405245 Msa0896700:CDS
GGTTAGATTCTATTTCAGTA+GGG 0.560795 6_1:+87405593 Msa0896700:CDS
GGAGACGGTGGATGTCGTCC+TGG 0.565171 6_1:-87404282 None:intergenic
CAGAGTCTTCAGATTCAGGA+TGG 0.566332 6_1:+87405572 Msa0896700:CDS
GGTTCATCAGGAACCGGAGA+CGG 0.570200 6_1:-87404297 None:intergenic
ACAAGGTCATGAAATTGACT+TGG 0.571070 6_1:-87402938 None:intergenic
GTATTTCTGTAAAATGGTCA+TGG 0.574756 6_1:-87405149 None:intergenic
ATATGTATATAGTCTGGAGG+TGG 0.586349 6_1:-87406195 None:intergenic
TCTTATATTCATAAATGTGG+TGG 0.586497 6_1:-87406041 None:intergenic
TACCGTTTGATCTACTGACC+GGG 0.593138 6_1:+87405317 Msa0896700:CDS
TGTAACGGCGGTGGAAGTGG+TGG 0.593963 6_1:+87403026 Msa0896700:CDS
ACACCCTTATTGATTCATGA+GGG 0.597478 6_1:+87406308 Msa0896700:three_prime_UTR
TTCAGTCTTAAGGACTGGAG+AGG 0.601463 6_1:-87405100 None:intergenic
CTGATGAACCTGCCAAGTTG+AGG 0.603273 6_1:+87404310 Msa0896700:CDS
GGAGAAATCTTCTGTTTAGG+CGG 0.604348 6_1:-87405124 None:intergenic
TGCAAACATTTGAAGATCTG+AGG 0.606663 6_1:-87404235 None:intergenic
ATGGATGGAAGGATGGGTGT+TGG 0.607502 6_1:-87406335 None:intergenic
GTGAAAGTCATTCTGTTCAG+TGG 0.609653 6_1:+87406109 Msa0896700:three_prime_UTR
GAAAGAAGACCTCCCCGCAA+TGG 0.611745 6_1:+87405058 Msa0896700:CDS
AATATGAAGAATGAAGAAGA+AGG 0.616890 6_1:-87402797 None:intergenic
TTTCAGGCCTAGGATTAAAG+GGG 0.619709 6_1:+87405913 Msa0896700:three_prime_UTR
TCATCAGGAACCGGAGACGG+TGG 0.639140 6_1:-87404294 None:intergenic
ACTTTGAGAATTCCACTACC+AGG 0.640003 6_1:+87404264 Msa0896700:CDS
AACAAACAAATTACACGCGT+AGG 0.642297 6_1:+87405883 Msa0896700:three_prime_UTR
GGATGCAGCAGTAGCAACTG+AGG 0.642796 6_1:+87405959 Msa0896700:three_prime_UTR
TCATCGCAGATTGACCATTG+CGG 0.644293 6_1:-87405072 None:intergenic
ATCGCAGATTGACCATTGCG+GGG 0.646593 6_1:-87405070 None:intergenic
AATATGATAGTACCTCAACT+TGG 0.646936 6_1:-87404322 None:intergenic
ATAATTCAGCAGCAACAGCA+TGG 0.658123 6_1:+87405698 Msa0896700:CDS
AAAGCTGATGTTGATAATGG+TGG 0.661855 6_1:+87405430 Msa0896700:CDS
AGTATATGTATATAGTCTGG+AGG 0.664530 6_1:-87406198 None:intergenic
ATGGTGGTACTACACCAGAA+AGG 0.669235 6_1:+87405446 Msa0896700:CDS
ATGATTGTTTGGAATCGGTG+AGG 0.669355 6_1:-87405278 None:intergenic
TTTACAGATATCAGCGACGG+GGG 0.670547 6_1:+87405367 Msa0896700:CDS
TCAAATGGGTTGTGTAACGG+CGG 0.676562 6_1:+87403014 Msa0896700:CDS
GATCTAAGATCTAAAACACA+AGG 0.686695 6_1:-87402955 None:intergenic
TGAAGACTCTGGAAACAGAG+AGG 0.710032 6_1:-87405560 None:intergenic
GCAGATTGACCATTGCGGGG+AGG 0.712219 6_1:-87405067 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTTTCATATAGAAAAAA+AGG - chr6_1:87403277-87403296 None:intergenic 10.0%
!!! TTTCAAAATTATATGTTTTA+TGG + chr6_1:87403364-87403383 Msa0896700:intron 10.0%
!!! TTTTTATGAATTTGAAAGTT+TGG + chr6_1:87403163-87403182 Msa0896700:intron 15.0%
!!! AGTTTTTATCTTTTTTCAAT+TGG + chr6_1:87403206-87403225 Msa0896700:intron 15.0%
!!! GTTTTTATCTTTTTTCAATT+GGG + chr6_1:87403207-87403226 Msa0896700:intron 15.0%
!!! TGAAAAATTAATGTTTTGTT+TGG + chr6_1:87403288-87403307 Msa0896700:intron 15.0%
!! TCTAATGTTACAATAATTTA+TGG + chr6_1:87406015-87406034 Msa0896700:three_prime_UTR 15.0%
!! AACATGTTTACAAATTTAAA+TGG - chr6_1:87406230-87406249 None:intergenic 15.0%
!! AAATGAAAGAAAGTTGAAAT+TGG - chr6_1:87402837-87402856 None:intergenic 20.0%
!!! GGTATAAAACTAAGAATTTT+TGG + chr6_1:87403139-87403158 Msa0896700:intron 20.0%
!!! TTTTTTCAATTGGGTTTTTA+GGG + chr6_1:87403216-87403235 Msa0896700:intron 20.0%
!!! TTTTTAGGGTTTTTTTTGTT+GGG + chr6_1:87403230-87403249 Msa0896700:intron 20.0%
!!! AATTAATGTTTTGTTTGGTT+TGG + chr6_1:87403293-87403312 Msa0896700:intron 20.0%
!! GATGAAAAAAAAAACACATA+GGG - chr6_1:87403415-87403434 None:intergenic 20.0%
!! AGATGAAAAAAAAAACACAT+AGG - chr6_1:87403416-87403435 None:intergenic 20.0%
!! TGTCAATATAAATGAAGTTT+AGG + chr6_1:87403684-87403703 Msa0896700:intron 20.0%
!! CTCTTATCTCAAAAAATTTA+AGG - chr6_1:87404007-87404026 None:intergenic 20.0%
!!! TAAATTTTTTGAGATAAGAG+TGG + chr6_1:87404007-87404026 Msa0896700:intron 20.0%
!! CATTTAAGTAACAGATAATA+GGG - chr6_1:87404108-87404127 None:intergenic 20.0%
!! ACATTTAAGTAACAGATAAT+AGG - chr6_1:87404109-87404128 None:intergenic 20.0%
!! ATTTCAATTAACACATTCAT+TGG - chr6_1:87404167-87404186 None:intergenic 20.0%
!! AATTGTAAGAAAAATTGTAC+AGG - chr6_1:87404418-87404437 None:intergenic 20.0%
!! TTTATTCTAATATTCCTTTC+TGG + chr6_1:87404628-87404647 Msa0896700:intron 20.0%
!! AAAGAAGGTAATAATAGTAA+TGG + chr6_1:87405475-87405494 Msa0896700:CDS 20.0%
!!! AATAATAGTAATGGATCAAA+CGG + chr6_1:87405484-87405503 Msa0896700:CDS 20.0%
!!! ACTAGTTTTACATTAATCAA+GGG - chr6_1:87405791-87405810 None:intergenic 20.0%
!!! AACTAGTTTTACATTAATCA+AGG - chr6_1:87405792-87405811 None:intergenic 20.0%
!!! TTTTTTATACCTTTTTTCTC+CGG - chr6_1:87405864-87405883 None:intergenic 20.0%
!! AACTCTTATATTCATAAATG+TGG - chr6_1:87406047-87406066 None:intergenic 20.0%
!!! TTGATTCAATCTTTTAACAA+AGG - chr6_1:87406089-87406108 None:intergenic 20.0%
!! AATTTGTAAACATGTTACAT+TGG + chr6_1:87406234-87406253 Msa0896700:three_prime_UTR 20.0%
!! CTTATAGTACTCAATTAAAT+TGG + chr6_1:87406278-87406297 Msa0896700:three_prime_UTR 20.0%
! AATATGAAGAATGAAGAAGA+AGG - chr6_1:87402800-87402819 None:intergenic 25.0%
! TTTGGATAAAGTAAGCAAAA+GGG - chr6_1:87402889-87402908 None:intergenic 25.0%
!! TTTTGGATAAAGTAAGCAAA+AGG - chr6_1:87402890-87402909 None:intergenic 25.0%
!! GTTTGGATTTTTCTTTGATT+TGG + chr6_1:87403180-87403199 Msa0896700:intron 25.0%
!!! CTTTTTTCAATTGGGTTTTT+AGG + chr6_1:87403215-87403234 Msa0896700:intron 25.0%
!!! GTTTTTAGGGTTTTTTTTGT+TGG + chr6_1:87403229-87403248 Msa0896700:intron 25.0%
!!! TTTTAGGGTTTTTTTTGTTG+GGG + chr6_1:87403231-87403250 Msa0896700:intron 25.0%
!! TTTATGGAATTGATGTTTTG+TGG + chr6_1:87403380-87403399 Msa0896700:intron 25.0%
!! AGTTGACATGAATCAAATTT+TGG + chr6_1:87403443-87403462 Msa0896700:intron 25.0%
!! TGCACTTGATAGTTAAATAA+TGG - chr6_1:87403505-87403524 None:intergenic 25.0%
!!! GAGATGTTGAAATTTTGATA+TGG + chr6_1:87403545-87403564 Msa0896700:intron 25.0%
! AATGATTATAGATCATGGAT+AGG + chr6_1:87403658-87403677 Msa0896700:intron 25.0%
! ATGATTATAGATCATGGATA+GGG + chr6_1:87403659-87403678 Msa0896700:intron 25.0%
!! GACTTAGTTATGTTTTCTTT+CGG - chr6_1:87404473-87404492 None:intergenic 25.0%
! GAAAACATAACTAAGTCAAA+AGG + chr6_1:87404476-87404495 Msa0896700:intron 25.0%
!! TATTAACAAAGCATTCAATG+AGG + chr6_1:87404552-87404571 Msa0896700:intron 25.0%
!! ATTAACAAAGCATTCAATGA+GGG + chr6_1:87404553-87404572 Msa0896700:intron 25.0%
! AAATATGAAGAACAAACACA+TGG - chr6_1:87404833-87404852 None:intergenic 25.0%
! TGAATAATATCATAGCTCAT+TGG + chr6_1:87404923-87404942 Msa0896700:intron 25.0%
! GATAGCAAATATTTACTAAC+CGG + chr6_1:87404956-87404975 Msa0896700:intron 25.0%
! GAATCTTAAATCAAAGTAAC+CGG - chr6_1:87404978-87404997 None:intergenic 25.0%
!! ACCATTTTACAGAAATACTA+TGG + chr6_1:87405154-87405173 Msa0896700:CDS 25.0%
!! TCCATAGTATTTCTGTAAAA+TGG - chr6_1:87405158-87405177 None:intergenic 25.0%
!!! AATGTAAAACTAGTTCTGTT+TGG + chr6_1:87405797-87405816 Msa0896700:exon 25.0%
! TCTTATATTCATAAATGTGG+TGG - chr6_1:87406044-87406063 None:intergenic 25.0%
! TACAGTATATGTATATAGTC+TGG - chr6_1:87406204-87406223 None:intergenic 25.0%
! ATGAAGAAGAAGGTTAGTTA+TGG - chr6_1:87402790-87402809 None:intergenic 30.0%
! GGTGAAAAAGTGAATTGTTT+TGG - chr6_1:87402907-87402926 None:intergenic 30.0%
!! ATTGACTTGGAAGATGAAAT+TGG - chr6_1:87402928-87402947 None:intergenic 30.0%
! GATCTAAGATCTAAAACACA+AGG - chr6_1:87402958-87402977 None:intergenic 30.0%
! AGATCTTAGATCTTTGTTGT+CGG + chr6_1:87402966-87402985 Msa0896700:five_prime_UTR 30.0%
TCAAAATTTGATACTCTTGC+TGG + chr6_1:87403092-87403111 Msa0896700:CDS 30.0%
!!! GTTTTTTTTGTTGGGGATTT+GGG + chr6_1:87403238-87403257 Msa0896700:intron 30.0%
!!! TTTTTTTTGTTGGGGATTTG+GGG + chr6_1:87403239-87403258 Msa0896700:intron 30.0%
!!! ATGTTTTGTTTGGTTTGGTT+TGG + chr6_1:87403298-87403317 Msa0896700:intron 30.0%
!!! TTTTGACTAGCAAGTTGATT+TGG + chr6_1:87403477-87403496 Msa0896700:intron 30.0%
GTGGAAATGATTATAGATCA+TGG + chr6_1:87403653-87403672 Msa0896700:intron 30.0%
TGATTATAGATCATGGATAG+GGG + chr6_1:87403660-87403679 Msa0896700:intron 30.0%
!!! TTTTTTTTAGCTTTCCACCT+TGG - chr6_1:87403776-87403795 None:intergenic 30.0%
! CATTTTATGGTGGCTTAAAA+AGG - chr6_1:87403802-87403821 None:intergenic 30.0%
! TTGTAAAATATCAGCATTGG+TGG - chr6_1:87403897-87403916 None:intergenic 30.0%
GTGTTGTAAAATATCAGCAT+TGG - chr6_1:87403900-87403919 None:intergenic 30.0%
! AATGCTTTAAGTAACCGATT+CGG - chr6_1:87404071-87404090 None:intergenic 30.0%
GAAATCCCTTGTAATTATTC+AGG + chr6_1:87404182-87404201 Msa0896700:intron 30.0%
AGCTACCTGAATAATTACAA+GGG - chr6_1:87404190-87404209 None:intergenic 30.0%
AATATGATAGTACCTCAACT+TGG - chr6_1:87404325-87404344 None:intergenic 30.0%
! AGTGTATTTTCCGTTTGTAA+TGG + chr6_1:87404350-87404369 Msa0896700:intron 30.0%
AACATAACTAAGTCAAAAGG+AGG + chr6_1:87404479-87404498 Msa0896700:intron 30.0%
ACATAACTAAGTCAAAAGGA+GGG + chr6_1:87404480-87404499 Msa0896700:intron 30.0%
AATCACTGTCAAACTCTAAA+AGG - chr6_1:87404588-87404607 None:intergenic 30.0%
TACAAAATGTAGTCAAATCG+TGG - chr6_1:87404734-87404753 None:intergenic 30.0%
AAAGCAGTGTAGTAAAATAG+CGG - chr6_1:87404802-87404821 None:intergenic 30.0%
! TATTTTACTACACTGCTTTC+TGG + chr6_1:87404803-87404822 Msa0896700:intron 30.0%
! GTATTTCTGTAAAATGGTCA+TGG - chr6_1:87405152-87405171 None:intergenic 30.0%
TCAAATTCCAGAGATAAATC+TGG + chr6_1:87405187-87405206 Msa0896700:CDS 30.0%
TAAATCTGGAGAAACAGAAT+TGG + chr6_1:87405201-87405220 Msa0896700:CDS 30.0%
! TTGGAATGATTGTTTGGAAT+CGG - chr6_1:87405286-87405305 None:intergenic 30.0%
!! AAACGGTAAATTTGTTGACT+TGG - chr6_1:87405305-87405324 None:intergenic 30.0%
! CAAAAAGCTGATGTTGATAA+TGG + chr6_1:87405427-87405446 Msa0896700:CDS 30.0%
TGGTTAGATTCTATTTCAGT+AGG + chr6_1:87405592-87405611 Msa0896700:CDS 30.0%
GGTTAGATTCTATTTCAGTA+GGG + chr6_1:87405593-87405612 Msa0896700:CDS 30.0%
AGTATATGTATATAGTCTGG+AGG - chr6_1:87406201-87406220 None:intergenic 30.0%
! AGAAGGTTAGTTATGGTTCT+TGG - chr6_1:87402783-87402802 None:intergenic 35.0%
ACAAGGTCATGAAATTGACT+TGG - chr6_1:87402941-87402960 None:intergenic 35.0%
! TGCTATTAAGTATGGTGTTG+AGG + chr6_1:87403118-87403137 Msa0896700:CDS 35.0%
!!! GGTTTTTTTTGTTGGGGATT+TGG + chr6_1:87403237-87403256 Msa0896700:intron 35.0%
GAGTTTCATTCTCCAAGTTT+AGG + chr6_1:87403614-87403633 Msa0896700:intron 35.0%
! CTCCAAGTTTAGGATATTCT+AGG + chr6_1:87403624-87403643 Msa0896700:intron 35.0%
CACCTAGAATATCCTAAACT+TGG - chr6_1:87403629-87403648 None:intergenic 35.0%
! CAAGTTTAGGATATTCTAGG+TGG + chr6_1:87403627-87403646 Msa0896700:intron 35.0%
GATTATAGATCATGGATAGG+GGG + chr6_1:87403661-87403680 Msa0896700:intron 35.0%
ATGTTATCAATCGCGTATAG+TGG + chr6_1:87403749-87403768 Msa0896700:intron 35.0%
! TGGCTAATTTGTGAAGGATT+TGG - chr6_1:87403835-87403854 None:intergenic 35.0%
AATCCTTCACAAATTAGCCA+TGG + chr6_1:87403835-87403854 Msa0896700:intron 35.0%
AAGATAGTTATCGTGTGATG+TGG + chr6_1:87403931-87403950 Msa0896700:intron 35.0%
CAGCTACCTGAATAATTACA+AGG - chr6_1:87404191-87404210 None:intergenic 35.0%
TGTCAAAAGGATGAATGGTT+TGG + chr6_1:87404212-87404231 Msa0896700:CDS 35.0%
TGCAAACATTTGAAGATCTG+AGG - chr6_1:87404238-87404257 None:intergenic 35.0%
! AGTTGTTGTGCCATTACAAA+CGG - chr6_1:87404363-87404382 None:intergenic 35.0%
ACAATTGCAAGACAAAAACG+AGG + chr6_1:87404432-87404451 Msa0896700:intron 35.0%
CAATTGCAAGACAAAAACGA+GGG + chr6_1:87404433-87404452 Msa0896700:intron 35.0%
AATTGCAAGACAAAAACGAG+GGG + chr6_1:87404434-87404453 Msa0896700:intron 35.0%
! GTTTTCTTTCGGTTGTATTC+TGG - chr6_1:87404462-87404481 None:intergenic 35.0%
CATAACTAAGTCAAAAGGAG+GGG + chr6_1:87404481-87404500 Msa0896700:intron 35.0%
ATAACTAAGTCAAAAGGAGG+GGG + chr6_1:87404482-87404501 Msa0896700:intron 35.0%
!!! CTGTTTTGAGTTCTGTATTC+TGG - chr6_1:87404518-87404537 None:intergenic 35.0%
! TGTCAAACTCTAAAAGGTGT+AGG - chr6_1:87404582-87404601 None:intergenic 35.0%
TTAGAGTTTGACAGTGATTC+TGG + chr6_1:87404589-87404608 Msa0896700:intron 35.0%
! ATAGCGATTTGTTCCTATTC+TGG + chr6_1:87404679-87404698 Msa0896700:intron 35.0%
AATATCATAGCTCATTGGTG+AGG + chr6_1:87404928-87404947 Msa0896700:intron 35.0%
TGTTTCTCCAGATTTATCTC+TGG - chr6_1:87405197-87405216 None:intergenic 35.0%
!! GTTGACTTGGAATGATTGTT+TGG - chr6_1:87405292-87405311 None:intergenic 35.0%
! TGTTTTACAGATATCAGCGA+CGG + chr6_1:87405364-87405383 Msa0896700:CDS 35.0%
!! AAAGCTGATGTTGATAATGG+TGG + chr6_1:87405430-87405449 Msa0896700:CDS 35.0%
! CATGGAAAATGTTTTTCCAG+AGG - chr6_1:87405518-87405537 None:intergenic 35.0%
! CTGGAAAAACATTTTCCATG+AGG + chr6_1:87405518-87405537 Msa0896700:CDS 35.0%
GATTCTATTTCAGTAGGGTT+AGG + chr6_1:87405598-87405617 Msa0896700:CDS 35.0%
GGAGATTCAATATTTGTCGA+TGG + chr6_1:87405619-87405638 Msa0896700:CDS 35.0%
!! ATATTTGTCGATGGACTATC+TGG + chr6_1:87405628-87405647 Msa0896700:CDS 35.0%
ATCAAAGATAGGCTTGGAAA+TGG - chr6_1:87405728-87405747 None:intergenic 35.0%
ATTTCCAAGCCTATCTTTGA+TGG + chr6_1:87405727-87405746 Msa0896700:CDS 35.0%
ATAGGTAAGCCATCAAAGAT+AGG - chr6_1:87405739-87405758 None:intergenic 35.0%
TTTGACATTTCAACTCTTCC+CGG + chr6_1:87405833-87405852 Msa0896700:three_prime_UTR 35.0%
AACAAACAAATTACACGCGT+AGG + chr6_1:87405883-87405902 Msa0896700:three_prime_UTR 35.0%
ACGCGTAGGATATTTATTTC+AGG + chr6_1:87405897-87405916 Msa0896700:three_prime_UTR 35.0%
AGGATATTTATTTCAGGCCT+AGG + chr6_1:87405903-87405922 Msa0896700:three_prime_UTR 35.0%
TATTTCAGGCCTAGGATTAA+AGG + chr6_1:87405911-87405930 Msa0896700:three_prime_UTR 35.0%
ATTTCAGGCCTAGGATTAAA+GGG + chr6_1:87405912-87405931 Msa0896700:three_prime_UTR 35.0%
TGATGATCTCACAAAGAGAA+AGG + chr6_1:87405938-87405957 Msa0896700:three_prime_UTR 35.0%
GAGGAAAAGATGCATGAAAA+AGG + chr6_1:87405978-87405997 Msa0896700:three_prime_UTR 35.0%
ATATGTATATAGTCTGGAGG+TGG - chr6_1:87406198-87406217 None:intergenic 35.0%
!! TACACCCTTATTGATTCATG+AGG + chr6_1:87406307-87406326 Msa0896700:three_prime_UTR 35.0%
!! ACACCCTTATTGATTCATGA+GGG + chr6_1:87406308-87406327 Msa0896700:three_prime_UTR 35.0%
! TCTTAGATCTTTGTTGTCGG+TGG + chr6_1:87402969-87402988 Msa0896700:five_prime_UTR 40.0%
! GTGGTGGTGTTAATGGAAAT+GGG + chr6_1:87403045-87403064 Msa0896700:CDS 40.0%
!! GCTGGTGTTGCTATTAAGTA+TGG + chr6_1:87403110-87403129 Msa0896700:CDS 40.0%
TAAGCCACCATAAAATGCCA+TGG + chr6_1:87403805-87403824 Msa0896700:intron 40.0%
GTGATGTGGAAAGTTGTTTG+AGG + chr6_1:87403945-87403964 Msa0896700:intron 40.0%
ATGTGGAAAGTTGTTTGAGG+TGG + chr6_1:87403948-87403967 Msa0896700:intron 40.0%
! AAAGTTGTTTGAGGTGGTGA+CGG + chr6_1:87403954-87403973 Msa0896700:intron 40.0%
ATCTTAACTCGTCACCGAAT+CGG + chr6_1:87404054-87404073 Msa0896700:intron 40.0%
TTCAGGTAGCTGATGTCAAA+AGG + chr6_1:87404199-87404218 Msa0896700:intron 40.0%
GCTGATGTCAAAAGGATGAA+TGG + chr6_1:87404207-87404226 Msa0896700:CDS 40.0%
! ACTTTGAGAATTCCACTACC+AGG + chr6_1:87404264-87404283 Msa0896700:CDS 40.0%
GGCACAACAACTTTAATCGT+CGG + chr6_1:87404371-87404390 Msa0896700:intron 40.0%
ACAACTTTAATCGTCGGTCA+AGG + chr6_1:87404377-87404396 Msa0896700:intron 40.0%
AATTGACAACACTGCCAGAA+AGG - chr6_1:87404645-87404664 None:intergenic 40.0%
TTTAGGCGGTTTCAGTCTTA+AGG - chr6_1:87405113-87405132 None:intergenic 40.0%
GGAGAAATCTTCTGTTTAGG+CGG - chr6_1:87405127-87405146 None:intergenic 40.0%
GCTGGAGAAATCTTCTGTTT+AGG - chr6_1:87405130-87405149 None:intergenic 40.0%
TTCTGTAAAATGGTCATGGC+TGG - chr6_1:87405148-87405167 None:intergenic 40.0%
! TGATTGTTTGGAATCGGTGA+GGG - chr6_1:87405280-87405299 None:intergenic 40.0%
! ATGATTGTTTGGAATCGGTG+AGG - chr6_1:87405281-87405300 None:intergenic 40.0%
TTACCGTTTGATCTACTGAC+CGG + chr6_1:87405316-87405335 Msa0896700:CDS 40.0%
! GTTTTACAGATATCAGCGAC+GGG + chr6_1:87405365-87405384 Msa0896700:CDS 40.0%
! TTTTACAGATATCAGCGACG+GGG + chr6_1:87405366-87405385 Msa0896700:CDS 40.0%
! CCTTCTTTGAAAAGCCTTTC+TGG - chr6_1:87405463-87405482 None:intergenic 40.0%
! CCAGAAAGGCTTTTCAAAGA+AGG + chr6_1:87405460-87405479 Msa0896700:CDS 40.0%
! GGAAAATGTTTTTCCAGAGG+AGG - chr6_1:87405515-87405534 None:intergenic 40.0%
TTTCCAGAGTCTTCAGATTC+AGG + chr6_1:87405568-87405587 Msa0896700:CDS 40.0%
! TATACTTTTCCTGCTCTCTG+AGG - chr6_1:87405681-87405700 None:intergenic 40.0%
ATAATTCAGCAGCAACAGCA+TGG + chr6_1:87405698-87405717 Msa0896700:CDS 40.0%
AAGATAGGCTTGGAAATGGT+TGG - chr6_1:87405724-87405743 None:intergenic 40.0%
TAAGCCATCAAAGATAGGCT+TGG - chr6_1:87405734-87405753 None:intergenic 40.0%
!!! CTTTTTTCTCCGGTTAAACC+GGG - chr6_1:87405854-87405873 None:intergenic 40.0%
!!! CCTTTTTTCTCCGGTTAAAC+CGG - chr6_1:87405855-87405874 None:intergenic 40.0%
TTTCAGGCCTAGGATTAAAG+GGG + chr6_1:87405913-87405932 Msa0896700:three_prime_UTR 40.0%
CATCAATCCCCTTTAATCCT+AGG - chr6_1:87405923-87405942 None:intergenic 40.0%
GTGAAAGTCATTCTGTTCAG+TGG + chr6_1:87406109-87406128 Msa0896700:three_prime_UTR 40.0%
GCACCCTCATGAATCAATAA+GGG - chr6_1:87406314-87406333 None:intergenic 40.0%
TGCACCCTCATGAATCAATA+AGG - chr6_1:87406315-87406334 None:intergenic 40.0%
! CTTTGTTGTCGGTGGTTGAT+CGG + chr6_1:87402977-87402996 Msa0896700:five_prime_UTR 45.0%
AGTAGATGTCGCCGTCAAAT+GGG + chr6_1:87403000-87403019 Msa0896700:exon 45.0%
CCGTTACACAACCCATTTGA+CGG - chr6_1:87403014-87403033 None:intergenic 45.0%
!! CCGTCAAATGGGTTGTGTAA+CGG + chr6_1:87403011-87403030 Msa0896700:CDS 45.0%
!! TCAAATGGGTTGTGTAACGG+CGG + chr6_1:87403014-87403033 Msa0896700:CDS 45.0%
! GGTGGTGGTGTTAATGGAAA+TGG + chr6_1:87403044-87403063 Msa0896700:CDS 45.0%
! TTTTTGTTGGGGATTTGGGG+AGG + chr6_1:87403242-87403261 Msa0896700:intron 45.0%
AGGATATTCTAGGTGGTGAG+TGG + chr6_1:87403634-87403653 Msa0896700:intron 45.0%
! AACGCCATGGCATTTTATGG+TGG - chr6_1:87403812-87403831 None:intergenic 45.0%
! TGGAACGCCATGGCATTTTA+TGG - chr6_1:87403815-87403834 None:intergenic 45.0%
! CCACCATGGCTAATTTGTGA+AGG - chr6_1:87403841-87403860 None:intergenic 45.0%
CCTTCACAAATTAGCCATGG+TGG + chr6_1:87403838-87403857 Msa0896700:intron 45.0%
TAGCCATGGTGGTTGTCAAA+AGG + chr6_1:87403849-87403868 Msa0896700:intron 45.0%
TGATAGTACCTCAACTTGGC+AGG - chr6_1:87404321-87404340 None:intergenic 45.0%
TCTGGCAGTGTTGTCAATTG+TGG + chr6_1:87404646-87404665 Msa0896700:intron 45.0%
GTGTTGTCAATTGTGGATCG+CGG + chr6_1:87404653-87404672 Msa0896700:intron 45.0%
GCAGTGTAGTAAAATAGCGG+TGG - chr6_1:87404799-87404818 None:intergenic 45.0%
TCATCGCAGATTGACCATTG+CGG - chr6_1:87405075-87405094 None:intergenic 45.0%
CAATGGTCAATCTGCGATGA+AGG + chr6_1:87405075-87405094 Msa0896700:CDS 45.0%
TTCAGTCTTAAGGACTGGAG+AGG - chr6_1:87405103-87405122 None:intergenic 45.0%
!! TTTGGAATCGGTGAGGGTTT+TGG - chr6_1:87405274-87405293 None:intergenic 45.0%
TACCGTTTGATCTACTGACC+GGG + chr6_1:87405317-87405336 Msa0896700:CDS 45.0%
TTCCCGGTCAGTAGATCAAA+CGG - chr6_1:87405322-87405341 None:intergenic 45.0%
TTTACAGATATCAGCGACGG+GGG + chr6_1:87405367-87405386 Msa0896700:CDS 45.0%
! CATCAGCTTTTTGACGTCTG+CGG - chr6_1:87405420-87405439 None:intergenic 45.0%
ATGGTGGTACTACACCAGAA+AGG + chr6_1:87405446-87405465 Msa0896700:CDS 45.0%
! TGAAGACTCTGGAAACAGAG+AGG - chr6_1:87405563-87405582 None:intergenic 45.0%
CATCCTGAATCTGAAGACTC+TGG - chr6_1:87405574-87405593 None:intergenic 45.0%
CAGAGTCTTCAGATTCAGGA+TGG + chr6_1:87405572-87405591 Msa0896700:CDS 45.0%
GGCTTACCTATCCCAATAAC+CGG + chr6_1:87405748-87405767 Msa0896700:CDS 45.0%
TACTTCTGCGTCCGGTTATT+GGG - chr6_1:87405762-87405781 None:intergenic 45.0%
TTACTTCTGCGTCCGGTTAT+TGG - chr6_1:87405763-87405782 None:intergenic 45.0%
TCAACTCTTCCCGGTTTAAC+CGG + chr6_1:87405842-87405861 Msa0896700:three_prime_UTR 45.0%
CCGGTTTAACCGGAGAAAAA+AGG + chr6_1:87405852-87405871 Msa0896700:three_prime_UTR 45.0%
GAGTAGATGTCGCCGTCAAA+TGG + chr6_1:87402999-87403018 Msa0896700:exon 50.0%
!! GGAAGTGGTGGTGGTGTTAA+TGG + chr6_1:87403038-87403057 Msa0896700:CDS 50.0%
!! CAATCGCGTATAGTGGACCA+AGG + chr6_1:87403756-87403775 Msa0896700:intron 50.0%
! GTGAAGGATTTGGAACGCCA+TGG - chr6_1:87403825-87403844 None:intergenic 50.0%
! GGACCTTTTGACAACCACCA+TGG - chr6_1:87403855-87403874 None:intergenic 50.0%
!! CAGCATTGGTGGCATTATCG+CGG - chr6_1:87403886-87403905 None:intergenic 50.0%
TTGGCAGGTTCATCAGGAAC+CGG - chr6_1:87404306-87404325 None:intergenic 50.0%
CTCAACTTGGCAGGTTCATC+AGG - chr6_1:87404312-87404331 None:intergenic 50.0%
CTGATGAACCTGCCAAGTTG+AGG + chr6_1:87404310-87404329 Msa0896700:CDS 50.0%
CCACTCTAGCGAACCAGAAT+AGG - chr6_1:87404695-87404714 None:intergenic 50.0%
!! CCTATTCTGGTTCGCTAGAG+TGG + chr6_1:87404692-87404711 Msa0896700:intron 50.0%
GCTAGAGTGGTATAGCACTG+CGG + chr6_1:87404705-87404724 Msa0896700:intron 50.0%
ATCGCAGATTGACCATTGCG+GGG - chr6_1:87405073-87405092 None:intergenic 50.0%
CATCGCAGATTGACCATTGC+GGG - chr6_1:87405074-87405093 None:intergenic 50.0%
GCGGTTTCAGTCTTAAGGAC+TGG - chr6_1:87405108-87405127 None:intergenic 50.0%
CAGATCATTCCAGAGACGAC+TGG + chr6_1:87405245-87405264 Msa0896700:CDS 50.0%
!! TTTTGGAAGCCAGTCGTCTC+TGG - chr6_1:87405257-87405276 None:intergenic 50.0%
CTCTGACACTTCATCGTTCC+CGG - chr6_1:87405338-87405357 None:intergenic 50.0%
! AGCTTTTTGACGTCTGCGGA+CGG - chr6_1:87405416-87405435 None:intergenic 50.0%
TCAAACGGTTCTTCCTCCTC+TGG + chr6_1:87405499-87405518 Msa0896700:CDS 50.0%
! ACTAGCTGATTTCGGCCTCA+TGG - chr6_1:87405536-87405555 None:intergenic 50.0%
! GAGGCTCGACTAGCTGATTT+CGG - chr6_1:87405544-87405563 None:intergenic 50.0%
! GGCAGTTTTACTTCTGCGTC+CGG - chr6_1:87405770-87405789 None:intergenic 50.0%
!! AATGGGTTGTGTAACGGCGG+TGG + chr6_1:87403017-87403036 Msa0896700:CDS 55.0%
TTGTGTAACGGCGGTGGAAG+TGG + chr6_1:87403023-87403042 Msa0896700:CDS 55.0%
TTGGGGATTTGGGGAGGATG+TGG + chr6_1:87403248-87403267 Msa0896700:intron 55.0%
!! TCGCGTATAGTGGACCAAGG+TGG + chr6_1:87403759-87403778 Msa0896700:intron 55.0%
! GGCATTATCGCGGATTGCAG+TGG - chr6_1:87403876-87403895 None:intergenic 55.0%
GGTTCATCAGGAACCGGAGA+CGG - chr6_1:87404300-87404319 None:intergenic 55.0%
GAAAGAAGACCTCCCCGCAA+TGG + chr6_1:87405058-87405077 Msa0896700:CDS 55.0%
CTGCGTCCGGTTATTGGGAT+AGG - chr6_1:87405757-87405776 None:intergenic 55.0%
GGATGCAGCAGTAGCAACTG+AGG + chr6_1:87405959-87405978 Msa0896700:three_prime_UTR 55.0%
TGTAACGGCGGTGGAAGTGG+TGG + chr6_1:87403026-87403045 Msa0896700:CDS 60.0%
GGTGGATGTCGTCCTGGTAG+TGG - chr6_1:87404279-87404298 None:intergenic 60.0%
AGGACGACATCCACCGTCTC+CGG + chr6_1:87404284-87404303 Msa0896700:CDS 60.0%
TCATCAGGAACCGGAGACGG+TGG - chr6_1:87404297-87404316 None:intergenic 60.0%
GCAGATTGACCATTGCGGGG+AGG - chr6_1:87405070-87405089 None:intergenic 60.0%
ACAGATATCAGCGACGGGGG+AGG + chr6_1:87405370-87405389 Msa0896700:CDS 60.0%
CGCATCAAGCCTCAGAGAGC+AGG + chr6_1:87405669-87405688 Msa0896700:CDS 60.0%
AACGGCGGTGGAAGTGGTGG+TGG + chr6_1:87403029-87403048 Msa0896700:CDS 65.0%
GGAGACGGTGGATGTCGTCC+TGG - chr6_1:87404285-87404304 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr6_1 gene 87402759 87406343 87402759 ID=Msa0896700;Name=Msa0896700
chr6_1 mRNA 87402759 87406343 87402759 ID=Msa0896700-mRNA-1;Parent=Msa0896700;Name=Msa0896700-mRNA-1;_AED=0.01;_eAED=0.01;_QI=246|1|1|1|1|1|3|545|338
chr6_1 exon 87402759 87403139 87402759 ID=Msa0896700-mRNA-1:exon:14749;Parent=Msa0896700-mRNA-1
chr6_1 exon 87404204 87404331 87404204 ID=Msa0896700-mRNA-1:exon:14750;Parent=Msa0896700-mRNA-1
chr6_1 exon 87405045 87406343 87405045 ID=Msa0896700-mRNA-1:exon:14751;Parent=Msa0896700-mRNA-1
chr6_1 five_prime_UTR 87402759 87403004 87402759 ID=Msa0896700-mRNA-1:five_prime_utr;Parent=Msa0896700-mRNA-1
chr6_1 CDS 87403005 87403139 87403005 ID=Msa0896700-mRNA-1:cds;Parent=Msa0896700-mRNA-1
chr6_1 CDS 87404204 87404331 87404204 ID=Msa0896700-mRNA-1:cds;Parent=Msa0896700-mRNA-1
chr6_1 CDS 87405045 87405798 87405045 ID=Msa0896700-mRNA-1:cds;Parent=Msa0896700-mRNA-1
chr6_1 three_prime_UTR 87405799 87406343 87405799 ID=Msa0896700-mRNA-1:three_prime_utr;Parent=Msa0896700-mRNA-1
Gene Sequence

>Msa0896700

ATGTCGCCGTCAAATGGGTTGTGTAACGGCGGTGGAAGTGGTGGTGGTGTTAATGGAAATGGGTTGAGTTATATTGAACATCATGTTTCAAAATTTGATACTCTTGCTGGTGTTGCTATTAAGTATGGTGTTGAGGTAGCTGATGTCAAAAGGATGAATGGTTTGGCCTCAGATCTTCAAATGTTTGCACTGAAGACTTTGAGAATTCCACTACCAGGACGACATCCACCGTCTCCGGTTCCTGATGAACCTGCCAAGTTGAGAGATAATAGCAGCGAAAGAAGACCTCCCCGCAATGGTCAATCTGCGATGAAGGAACCTCTCCAGTCCTTAAGACTGAAACCGCCTAAACAGAAGATTTCTCCAGCCATGACCATTTTACAGAAATACTATGGACTCGACTCGTCAAATTCCAGAGATAAATCTGGAGAAACAGAATTGGCGATGTATACATCTTCTACTTCAGATCATTCCAGAGACGACTGGCTTCCAAAACCCTCACCGATTCCAAACAATCATTCCAAGTCAACAAATTTACCGTTTGATCTACTGACCGGGAACGATGAAGTGTCAGAGTATATGTGTTTTACAGATATCAGCGACGGGGGAGGTGATAAGTCTGACGAGAAATCCGTCCGCAGACGTCAAAAAGCTGATGTTGATAATGGTGGTACTACACCAGAAAGGCTTTTCAAAGAAGGTAATAATAGTAATGGATCAAACGGTTCTTCCTCCTCTGGAAAAACATTTTCCATGAGGCCGAAATCAGCTAGTCGAGCCTCTCTGTTTCCAGAGTCTTCAGATTCAGGATGGTTAGATTCTATTTCAGTAGGGTTAGGAGATTCAATATTTGTCGATGGACTATCTGGAGTGCGCAAATCGTCGAGCGCATCAAGCCTCAGAGAGCAGGAAAAGTATAATTCAGCAGCAACAGCATGGCCAACCATTTCCAAGCCTATCTTTGATGGCTTACCTATCCCAATAACCGGACGCAGAAGTAAAACTGCCCTTGATTAA
Protein sequence

>Msa0896700

MSPSNGLCNGGGSGGGVNGNGLSYIEHHVSKFDTLAGVAIKYGVEVADVKRMNGLASDLQMFALKTLRIPLPGRHPPSPVPDEPAKLRDNSSERRPPRNGQSAMKEPLQSLRLKPPKQKISPAMTILQKYYGLDSSNSRDKSGETELAMYTSSTSDHSRDDWLPKPSPIPNNHSKSTNLPFDLLTGNDEVSEYMCFTDISDGGGDKSDEKSVRRRQKADVDNGGTTPERLFKEGNNSNGSNGSSSSGKTFSMRPKSASRASLFPESSDSGWLDSISVGLGDSIFVDGLSGVRKSSSASSLREQEKYNSAATAWPTISKPIFDGLPIPITGRRSKTALD*