Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1368180 | XP_024638150.2 | 98.251 | 686 | 12 | 0 | 1 | 686 | 1 | 686 | 0.0 | 1364 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1368180 | sp|Q9UT00|YKH3_SCHPO | 22.864 | 433 | 270 | 16 | 152 | 560 | 176 | 568 | 7.33e-14 | 79.3 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1368180 | A0A396IFG1 | 98.251 | 686 | 12 | 0 | 1 | 686 | 1 | 686 | 0.0 | 1364 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0012260 | Msa1368180 | 0.802885 | 4.536955e-49 | -8.615850e-47 |
| Msa0043960 | Msa1368180 | -0.828168 | 1.044343e-54 | -8.615850e-47 |
| Msa0044050 | Msa1368180 | -0.831529 | 1.585551e-55 | -8.615850e-47 |
| Msa0060970 | Msa1368180 | 0.819119 | 1.372691e-52 | -8.615850e-47 |
| Msa0090620 | Msa1368180 | -0.809924 | 1.487641e-50 | -8.615850e-47 |
| Msa0092380 | Msa1368180 | 0.805736 | 1.155834e-49 | -8.615850e-47 |
| Msa0099900 | Msa1368180 | 0.819395 | 1.187827e-52 | -8.615850e-47 |
| Msa1368180 | Msa1373590 | 0.800400 | 1.467120e-48 | -8.615850e-47 |
| Msa1368180 | Msa1385580 | 0.989239 | 2.823467e-177 | -8.615850e-47 |
| Msa1368180 | Msa1397040 | 0.829399 | 5.261099e-55 | -8.615850e-47 |
| Msa1368180 | Msa1399420 | 0.809024 | 2.321726e-50 | -8.615850e-47 |
| Msa1368180 | Msa1404720 | 0.852331 | 4.951252e-61 | -8.615850e-47 |
| Msa1368180 | Msa1415820 | 0.806206 | 9.205528e-50 | -8.615850e-47 |
| Msa1368180 | Msa1454750 | 0.831230 | 1.877692e-55 | -8.615850e-47 |
| Msa0624890 | Msa1368180 | 0.811983 | 5.327072e-51 | -8.615850e-47 |
| Msa0625510 | Msa1368180 | 0.821913 | 3.135760e-53 | -8.615850e-47 |
| Msa0736930 | Msa1368180 | 0.805226 | 1.478693e-49 | -8.615850e-47 |
| Msa0774020 | Msa1368180 | 0.806632 | 7.485345e-50 | -8.615850e-47 |
| Msa0781900 | Msa1368180 | 0.819878 | 9.217914e-53 | -8.615850e-47 |
| Msa0786970 | Msa1368180 | 0.824045 | 9.984624e-54 | -8.615850e-47 |
| Msa0175720 | Msa1368180 | 0.804954 | 1.685476e-49 | -8.615850e-47 |
| Msa0183800 | Msa1368180 | -0.827097 | 1.888508e-54 | -8.615850e-47 |
| Msa0189880 | Msa1368180 | 0.835193 | 1.934506e-56 | -8.615850e-47 |
| Msa0204780 | Msa1368180 | 0.822679 | 2.082599e-53 | -8.615850e-47 |
| Msa0216010 | Msa1368180 | 0.831302 | 1.802641e-55 | -8.615850e-47 |
| Msa0216560 | Msa1368180 | 0.867837 | 1.019653e-65 | -8.615850e-47 |
| Msa1242990 | Msa1368180 | 0.810250 | 1.265522e-50 | -8.615850e-47 |
| Msa1265250 | Msa1368180 | 0.807801 | 4.232969e-50 | -8.615850e-47 |
| Msa1284390 | Msa1368180 | 0.805772 | 1.135933e-49 | -8.615850e-47 |
| Msa0370870 | Msa1368180 | 0.815461 | 9.138176e-52 | -8.615850e-47 |
| Msa0379060 | Msa1368180 | 0.831203 | 1.907086e-55 | -8.615850e-47 |
| Msa0381220 | Msa1368180 | 0.822194 | 2.699307e-53 | -8.615850e-47 |
| Msa0428690 | Msa1368180 | 0.803455 | 3.457078e-49 | -8.615850e-47 |
| Msa0431020 | Msa1368180 | 0.848714 | 5.139736e-60 | -8.615850e-47 |
| Msa0456480 | Msa1368180 | 0.802699 | 4.955927e-49 | -8.615850e-47 |
| Msa0471790 | Msa1368180 | 0.836731 | 7.879177e-57 | -8.615850e-47 |
| Msa0475050 | Msa1368180 | 0.861568 | 9.363050e-64 | -8.615850e-47 |
| Msa0981900 | Msa1368180 | 0.807109 | 5.934403e-50 | -8.615850e-47 |
| Msa0982590 | Msa1368180 | 0.840257 | 9.697134e-58 | -8.615850e-47 |
| Msa1057320 | Msa1368180 | 0.818947 | 1.502506e-52 | -8.615850e-47 |
| Msa1078540 | Msa1368180 | 0.802831 | 4.654771e-49 | -8.615850e-47 |
| Msa0256170 | Msa1368180 | 0.818608 | 1.793699e-52 | -8.615850e-47 |
| Msa0256430 | Msa1368180 | 0.812520 | 4.068629e-51 | -8.615850e-47 |
| Msa0273710 | Msa1368180 | 0.805243 | 1.466695e-49 | -8.615850e-47 |
| Msa0295840 | Msa1368180 | 0.868490 | 6.281729e-66 | -8.615850e-47 |
| Msa0310490 | Msa1368180 | 0.856345 | 3.425217e-62 | -8.615850e-47 |
| Msa0328380 | Msa1368180 | 0.816026 | 6.836160e-52 | -8.615850e-47 |
| Msa0334180 | Msa1368180 | 0.803250 | 3.812703e-49 | -8.615850e-47 |
| Msa1124180 | Msa1368180 | 0.805093 | 1.576156e-49 | -8.615850e-47 |
| Msa1143790 | Msa1368180 | 0.805088 | 1.580548e-49 | -8.615850e-47 |
| Msa1190990 | Msa1368180 | 0.810615 | 1.055273e-50 | -8.615850e-47 |
| Msa1204260 | Msa1368180 | 0.816757 | 4.691860e-52 | -8.615850e-47 |
| Msa0522120 | Msa1368180 | 0.848389 | 6.323842e-60 | -8.615850e-47 |
| Msa0542360 | Msa1368180 | 0.813244 | 2.823082e-51 | -8.615850e-47 |
| Msa0545910 | Msa1368180 | 0.826068 | 3.323456e-54 | -8.615850e-47 |
| Msa0552580 | Msa1368180 | 0.828768 | 7.482765e-55 | -8.615850e-47 |
| Msa0598560 | Msa1368180 | 0.815017 | 1.146891e-51 | -8.615850e-47 |
| Msa0601710 | Msa1368180 | 0.813352 | 2.673062e-51 | -8.615850e-47 |
| Msa0866800 | Msa1368180 | 0.815367 | 9.588573e-52 | -8.615850e-47 |
| Msa0896700 | Msa1368180 | 0.816093 | 6.605488e-52 | -8.615850e-47 |
| Msa0902800 | Msa1368180 | 0.804518 | 2.078593e-49 | -8.615850e-47 |
| Msa0962210 | Msa1368180 | 0.809550 | 1.790285e-50 | -8.615850e-47 |
| Msa0975970 | Msa1368180 | 0.812623 | 3.862885e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1368180 | MtrunA17_Chr4g0037821 | 98.251 | 686 | 12 | 0 | 1 | 686 | 1 | 686 | 0.0 | 1364 |
| Msa1368180 | MtrunA17_Chr4g0060321 | 93.313 | 329 | 12 | 3 | 364 | 686 | 9 | 333 | 0.0 | 521 |
| Msa1368180 | MtrunA17_Chr2g0313621 | 22.477 | 436 | 281 | 14 | 155 | 573 | 33 | 428 | 2.05e-16 | 83.6 |
| Msa1368180 | MtrunA17_Chr1g0199571 | 24.915 | 293 | 189 | 9 | 204 | 493 | 69 | 333 | 3.72e-13 | 72.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1368180 | AT3G19830.1 | 64.815 | 702 | 187 | 13 | 14 | 686 | 23 | 693 | 0.0 | 847 |
| Msa1368180 | AT3G19830.3 | 64.815 | 702 | 187 | 13 | 14 | 686 | 23 | 693 | 0.0 | 847 |
| Msa1368180 | AT3G19830.2 | 64.815 | 702 | 187 | 13 | 14 | 686 | 23 | 693 | 0.0 | 847 |
| Msa1368180 | AT3G19830.4 | 64.815 | 702 | 187 | 13 | 14 | 686 | 23 | 693 | 0.0 | 847 |
| Msa1368180 | AT1G50260.1 | 62.623 | 709 | 208 | 13 | 1 | 686 | 1 | 675 | 0.0 | 766 |
| Msa1368180 | AT1G50260.2 | 57.405 | 709 | 204 | 13 | 1 | 686 | 1 | 634 | 0.0 | 678 |
| Msa1368180 | AT3G61050.2 | 22.314 | 363 | 249 | 9 | 204 | 560 | 68 | 403 | 1.45e-11 | 67.8 |
| Msa1368180 | AT3G61050.1 | 22.314 | 363 | 249 | 9 | 204 | 560 | 68 | 403 | 1.45e-11 | 67.8 |
| Msa1368180 | AT1G53590.1 | 21.608 | 398 | 261 | 13 | 144 | 525 | 22 | 384 | 9.14e-11 | 65.9 |
Find 190 sgRNAs with CRISPR-Local
Find 488 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGAATTAATACTTTGAAAT+TGG | 0.093738 | tig0018625:-5810 | None:intergenic |
| ATTTCGTTTGTTCAACTTAA+TGG | 0.132446 | tig0018625:+7591 | Msa1368180:CDS |
| TTAAGCCTTTCTCTGAAATT+TGG | 0.173257 | tig0018625:+7415 | Msa1368180:CDS |
| AATTCGCTAATTCTGCTAAA+AGG | 0.177736 | tig0018625:+6134 | Msa1368180:CDS |
| TTAGCAGAATTAGCGAATTT+TGG | 0.179251 | tig0018625:-6130 | None:intergenic |
| ATGCAGGGTCGGCCTTATTT+TGG | 0.236237 | tig0018625:+11561 | Msa1368180:intron |
| CCAGCAACGTTTCGGTTAAT+AGG | 0.240293 | tig0018625:-6346 | None:intergenic |
| AGAATCATTTATGGATGTTT+TGG | 0.240494 | tig0018625:+11259 | Msa1368180:CDS |
| GGACTTGAGAATTGGATTAT+TGG | 0.248656 | tig0018625:+6586 | Msa1368180:CDS |
| GCGCCCCTGGAATGCCAATT+TGG | 0.250515 | tig0018625:+9442 | Msa1368180:CDS |
| GATAATTCTGAAGGTTCTTC+TGG | 0.258885 | tig0018625:+11425 | Msa1368180:CDS |
| CTTGGGTCGGAGCTGCTTCA+TGG | 0.263197 | tig0018625:+7527 | Msa1368180:CDS |
| GACAGTTCAAACTTGATCTT+TGG | 0.263404 | tig0018625:-7565 | None:intergenic |
| TACTAGCGGCGCGTGATTCT+TGG | 0.265437 | tig0018625:+12514 | Msa1368180:three_prime_UTR |
| GGCAGATAAAGAATCATTTA+TGG | 0.272115 | tig0018625:+11250 | Msa1368180:CDS |
| AGTCATCATTATTCGCATAT+TGG | 0.283287 | tig0018625:-12698 | None:intergenic |
| TTTGAATTGAAGATGAATAA+AGG | 0.292974 | tig0018625:-6084 | None:intergenic |
| GACTTGAGAATTGGATTATT+GGG | 0.298406 | tig0018625:+6587 | Msa1368180:CDS |
| CCTATTAACCGAAACGTTGC+TGG | 0.299670 | tig0018625:+6346 | Msa1368180:CDS |
| ACGGCCAAACAAAATTGTTT+TGG | 0.302867 | tig0018625:+8465 | Msa1368180:CDS |
| TGAATTAATACTTTGAAATT+GGG | 0.304874 | tig0018625:-5809 | None:intergenic |
| TGATTCCAAATTGGCATTCC+AGG | 0.305676 | tig0018625:-9447 | None:intergenic |
| TTTCGTTTGTTCAACTTAAT+GGG | 0.307586 | tig0018625:+7592 | Msa1368180:CDS |
| GGGATGAACCTTTGTCTGTT+AGG | 0.310807 | tig0018625:+6686 | Msa1368180:CDS |
| TTTACCAAAGGTTTGGATAA+TGG | 0.313194 | tig0018625:+11335 | Msa1368180:CDS |
| CAGTATACCTAAGGCCTATC+TGG | 0.314663 | tig0018625:-7375 | None:intergenic |
| GGATTTGCAGATTTGACTAT+TGG | 0.318186 | tig0018625:+9620 | Msa1368180:CDS |
| GGGATAGTAGCATCTGAAAC+AGG | 0.328126 | tig0018625:+11311 | Msa1368180:CDS |
| TCAACCCTTTCAACATAATC+AGG | 0.328171 | tig0018625:-6643 | None:intergenic |
| AACAACACCTGATTCCAAAT+TGG | 0.330831 | tig0018625:-9456 | None:intergenic |
| TACTTTGAAATTGGGATTTG+TGG | 0.333753 | tig0018625:-5801 | None:intergenic |
| AATCACAGCAAGCCAAAATA+AGG | 0.343122 | tig0018625:-11573 | None:intergenic |
| GAGATTAAGCAGTTCTCGTT+AGG | 0.346911 | tig0018625:+6664 | Msa1368180:CDS |
| CAATAATAAAATAGAATAAC+AGG | 0.350346 | tig0018625:+12630 | Msa1368180:three_prime_UTR |
| GGGAAAGGAAAGAAGAGAAT+TGG | 0.357282 | tig0018625:-5987 | None:intergenic |
| GAGGGATTCACAGGTTCAAT+TGG | 0.357792 | tig0018625:+6237 | Msa1368180:CDS |
| AACAGGGTTTACCAAAGGTT+TGG | 0.361166 | tig0018625:+11328 | Msa1368180:CDS |
| GGATAAGCTTAGAACTCAAT+TGG | 0.361720 | tig0018625:+6297 | Msa1368180:CDS |
| CAGATAGGCCTTAGGTATAC+TGG | 0.362284 | tig0018625:+7376 | Msa1368180:CDS |
| AAAGTCACAGACAAGTAAAA+TGG | 0.365448 | tig0018625:-12662 | None:intergenic |
| GCTGCATGCAATCTTCATCT+TGG | 0.369898 | tig0018625:+11667 | Msa1368180:three_prime_UTR |
| GAATGGGTGAATATGGTGTT+AGG | 0.371051 | tig0018625:+6538 | Msa1368180:CDS |
| TTCTTCAAATCATCAATAAC+AGG | 0.371788 | tig0018625:-6619 | None:intergenic |
| TGAAGAATCATGAATGGATA+TGG | 0.378391 | tig0018625:-5908 | None:intergenic |
| TAAATCTACTGTAAGAAGTT+TGG | 0.378740 | tig0018625:-8428 | None:intergenic |
| GTCGGTTGAATGGGTGAATA+TGG | 0.388145 | tig0018625:+6531 | Msa1368180:CDS |
| ATAGAGGTGGACTTGAGAAT+TGG | 0.388213 | tig0018625:+6578 | Msa1368180:CDS |
| ATTCGCTAATTCTGCTAAAA+GGG | 0.391915 | tig0018625:+6135 | Msa1368180:CDS |
| GTTCTAAGCTTATCCACAAT+TGG | 0.393077 | tig0018625:-6289 | None:intergenic |
| ATCCCAGAGCGTCCTTAACT+TGG | 0.393432 | tig0018625:-9601 | None:intergenic |
| TTGGATAATGGCTCAAATAC+AGG | 0.400332 | tig0018625:+11347 | Msa1368180:CDS |
| TTGAATTGAAGATGAATAAA+GGG | 0.400506 | tig0018625:-6083 | None:intergenic |
| ATCATGAATGGATATGGATA+TGG | 0.402142 | tig0018625:-5902 | None:intergenic |
| GGAAGCATAATTGTTGTTGC+AGG | 0.407437 | tig0018625:-5966 | None:intergenic |
| ACACCAACAGGTACAACAAT+TGG | 0.410509 | tig0018625:-7445 | None:intergenic |
| TGAGCCATTATCCAAACCTT+TGG | 0.412143 | tig0018625:-11339 | None:intergenic |
| TCGGGTTGGAAACAAGCATA+TGG | 0.412541 | tig0018625:-9559 | None:intergenic |
| TTAATAGGCGGCGATGGAAT+CGG | 0.413054 | tig0018625:-6331 | None:intergenic |
| ATTGATTCCGCATTGGCAAC+AGG | 0.413301 | tig0018625:-11389 | None:intergenic |
| GTCGTTGATGGTGTTAAATC+TGG | 0.415146 | tig0018625:+8532 | Msa1368180:CDS |
| TGGAATGCCAATTTGGAATC+AGG | 0.417628 | tig0018625:+9449 | Msa1368180:CDS |
| ACTACTGTCATTGGCGCCCC+TGG | 0.419613 | tig0018625:+9429 | Msa1368180:CDS |
| TGACATTGATGGTGAACTTT+GGG | 0.426042 | tig0018625:+7477 | Msa1368180:CDS |
| GAATTGGAATGAAGAAAGAT+TGG | 0.432730 | tig0018625:-5696 | None:intergenic |
| ATAAATGATTCTTTATCTGC+CGG | 0.434471 | tig0018625:-11248 | None:intergenic |
| ATGTTATGAAGAAATTGAAT+TGG | 0.437482 | tig0018625:-5712 | None:intergenic |
| CCATATGTCATTCTTAGCCT+TGG | 0.439251 | tig0018625:+9372 | Msa1368180:CDS |
| TAATACCAAATTTCAGAGAA+AGG | 0.439413 | tig0018625:-7420 | None:intergenic |
| CAAAGAGAGAAGTGAAAAGT+AGG | 0.440111 | tig0018625:-5941 | None:intergenic |
| ACTGTTGGTCCTGTCGTTGA+TGG | 0.440638 | tig0018625:+8520 | Msa1368180:CDS |
| ATTAATACCAACAGCTCCTT+GGG | 0.443767 | tig0018625:+7510 | Msa1368180:CDS |
| TAATAGGCGGCGATGGAATC+GGG | 0.444027 | tig0018625:-6330 | None:intergenic |
| TATCCAAGTTAAGGACGCTC+TGG | 0.445536 | tig0018625:+9598 | Msa1368180:CDS |
| GAAACTTACATCGAGAGAAC+TGG | 0.447259 | tig0018625:-8042 | None:intergenic |
| ATTAAGTTGAACAAACGAAA+TGG | 0.449004 | tig0018625:-7589 | None:intergenic |
| GACAGAATTGTTGCTTTACA+AGG | 0.450629 | tig0018625:+11032 | Msa1368180:CDS |
| TCAAAATCTCGAACACCAAC+AGG | 0.452033 | tig0018625:-7457 | None:intergenic |
| CTTAGGGTTACATGGACATA+AGG | 0.453337 | tig0018625:-12798 | None:intergenic |
| GTCTGAAACATCTATATCAA+TGG | 0.453813 | tig0018625:-11159 | None:intergenic |
| TTGGGTCGGAGCTGCTTCAT+GGG | 0.457177 | tig0018625:+7528 | Msa1368180:CDS |
| AAAATGTAAACTTGAATGCT+TGG | 0.457267 | tig0018625:-5768 | None:intergenic |
| CAAACAAACCAGCAACGTTT+CGG | 0.458309 | tig0018625:-6354 | None:intergenic |
| AACAGTCAAACTACTGTCAT+TGG | 0.458505 | tig0018625:+9420 | Msa1368180:CDS |
| TTGACATTGATGGTGAACTT+TGG | 0.460520 | tig0018625:+7476 | Msa1368180:CDS |
| ACTTGAATGCTTGGGAATGT+TGG | 0.462686 | tig0018625:-5759 | None:intergenic |
| AATGATGAACTTGAAGTTGA+AGG | 0.462989 | tig0018625:+6199 | Msa1368180:CDS |
| ATCCTGACAGGTTGTGCAGT+GGG | 0.463344 | tig0018625:+12406 | Msa1368180:intron |
| GAAGTTAAGTATCCAAGTTA+AGG | 0.473337 | tig0018625:+9589 | Msa1368180:CDS |
| GATTAATACCAACAGCTCCT+TGG | 0.474206 | tig0018625:+7509 | Msa1368180:CDS |
| GCAGATTTGACTATTGGTAC+TGG | 0.474231 | tig0018625:+9626 | Msa1368180:CDS |
| TTTCAGATGCTACTATCCCT+TGG | 0.481868 | tig0018625:-11307 | None:intergenic |
| AGGGATTCACAGGTTCAATT+GGG | 0.482120 | tig0018625:+6238 | Msa1368180:CDS |
| AGATTAAGCAGTTCTCGTTA+GGG | 0.484229 | tig0018625:+6665 | Msa1368180:CDS |
| CGTAAGAGATTCTGCGTACC+CGG | 0.493051 | tig0018625:+11229 | Msa1368180:CDS |
| GAGGAAAGAGTCGGTTGAAT+GGG | 0.494576 | tig0018625:+6522 | Msa1368180:CDS |
| TTGTGGAAGGTTTATAGAGG+TGG | 0.495319 | tig0018625:+6565 | Msa1368180:CDS |
| CCAAGGCTAAGAATGACATA+TGG | 0.496475 | tig0018625:-9372 | None:intergenic |
| GATTCCAAATTGGCATTCCA+GGG | 0.496914 | tig0018625:-9446 | None:intergenic |
| AAATGTAAACTTGAATGCTT+GGG | 0.497706 | tig0018625:-5767 | None:intergenic |
| AGAGGAAAGAGTCGGTTGAA+TGG | 0.499889 | tig0018625:+6521 | Msa1368180:CDS |
| AAGTTGTGGAAGGTTTATAG+AGG | 0.500887 | tig0018625:+6562 | Msa1368180:CDS |
| GATAAGCTTAGAACTCAATT+GGG | 0.503313 | tig0018625:+6298 | Msa1368180:CDS |
| ATTCCAATTGTTGTACCTGT+TGG | 0.505566 | tig0018625:+7442 | Msa1368180:CDS |
| CTAGATACCAGATAGGCCTT+AGG | 0.509703 | tig0018625:+7368 | Msa1368180:intron |
| GGTGTTAGGGAAGTTGTGGA+AGG | 0.511394 | tig0018625:+6552 | Msa1368180:CDS |
| TTTGGCCGTACAAATAGTCT+AGG | 0.514653 | tig0018625:-8451 | None:intergenic |
| AGGCGGTGAACGTGAATTGA+GGG | 0.516382 | tig0018625:+6219 | Msa1368180:CDS |
| AGCAAATGTCACTGATACGA+TGG | 0.516797 | tig0018625:+11205 | Msa1368180:CDS |
| CAGAATTGTTGCTTTACAAG+GGG | 0.518230 | tig0018625:+11034 | Msa1368180:CDS |
| GTTGGAAGTGGGAAGAGGAA+TGG | 0.522718 | tig0018625:-5741 | None:intergenic |
| GGAATGTTGGAAGTGGGAAG+AGG | 0.527131 | tig0018625:-5746 | None:intergenic |
| AGAAGCCTGATTATGTTGAA+AGG | 0.533351 | tig0018625:+6638 | Msa1368180:CDS |
| AAGGCGGTGAACGTGAATTG+AGG | 0.533789 | tig0018625:+6218 | Msa1368180:CDS |
| GCTTGTTGAAGAATCATGAA+TGG | 0.534248 | tig0018625:-5914 | None:intergenic |
| ACGACAGGACCAACAGTGAC+GGG | 0.535880 | tig0018625:-8514 | None:intergenic |
| ATTTACCTAGACTATTTGTA+CGG | 0.536468 | tig0018625:+8446 | Msa1368180:CDS |
| AATGGGTGAATATGGTGTTA+GGG | 0.536900 | tig0018625:+6539 | Msa1368180:CDS |
| GCTAACATATAAAGCATATG+TGG | 0.540309 | tig0018625:+11103 | Msa1368180:CDS |
| TAGACAAAAGAATGAACAAA+GGG | 0.543001 | tig0018625:-5875 | None:intergenic |
| TAAATGATTCTTTATCTGCC+GGG | 0.543828 | tig0018625:-11247 | None:intergenic |
| TAAAGCATATGTGGAGGATG+AGG | 0.544623 | tig0018625:+11112 | Msa1368180:CDS |
| TCATTATTCGCATATTGGAA+AGG | 0.545875 | tig0018625:-12693 | None:intergenic |
| TTTCGGTTAATAGGCGGCGA+TGG | 0.546448 | tig0018625:-6337 | None:intergenic |
| ATGCTTGGGAATGTTGGAAG+TGG | 0.546750 | tig0018625:-5753 | None:intergenic |
| CATGAAGCAGCTCCGACCCA+AGG | 0.547246 | tig0018625:-7526 | None:intergenic |
| TGAACTCTCCGTGACTCTTG+TGG | 0.547422 | tig0018625:+8588 | Msa1368180:CDS |
| GAAGCATAATTGTTGTTGCA+GGG | 0.547931 | tig0018625:-5965 | None:intergenic |
| TTCGAGAAGGGAAAAGCTGT+TGG | 0.550160 | tig0018625:+8490 | Msa1368180:CDS |
| AAAGCAACAATTCTGTCTGT+TGG | 0.552705 | tig0018625:-11026 | None:intergenic |
| AAATAACAAGGCAATCAGAA+TGG | 0.554793 | tig0018625:+12765 | Msa1368180:three_prime_UTR |
| GCTGTTGGTCCCGTCACTGT+TGG | 0.556112 | tig0018625:+8505 | Msa1368180:CDS |
| ACGTGAATTGAGGGATTCAC+AGG | 0.556743 | tig0018625:+6228 | Msa1368180:CDS |
| ATATGGTGTTAGGGAAGTTG+TGG | 0.559551 | tig0018625:+6548 | Msa1368180:CDS |
| AGTATCTTCAATCCTTGAGA+TGG | 0.561818 | tig0018625:+11638 | Msa1368180:exon |
| GAAGCCTGATTATGTTGAAA+GGG | 0.562405 | tig0018625:+6639 | Msa1368180:CDS |
| GAGGAACAAAGTTAGTAGTG+AGG | 0.565375 | tig0018625:+6432 | Msa1368180:CDS |
| ATCCAAGTTAAGGACGCTCT+GGG | 0.566547 | tig0018625:+9599 | Msa1368180:CDS |
| AACGACAGGACCAACAGTGA+CGG | 0.567745 | tig0018625:-8515 | None:intergenic |
| TATCCTGACAGGTTGTGCAG+TGG | 0.572526 | tig0018625:+12405 | Msa1368180:intron |
| CGTCTGGGGAGATATTGCTT+AGG | 0.577276 | tig0018625:+11081 | Msa1368180:CDS |
| TGCGTATGGTTTGATCTCCA+AGG | 0.577385 | tig0018625:-9389 | None:intergenic |
| AGGAGGAATTGATTCCGCAT+TGG | 0.577509 | tig0018625:-11396 | None:intergenic |
| CCTAGTGCTGATAATTCTGA+AGG | 0.579399 | tig0018625:+11416 | Msa1368180:CDS |
| ATTGTTAGCGAAGAATTCCA+AGG | 0.582227 | tig0018625:+11290 | Msa1368180:CDS |
| AAGTGGGAAGAGGAATGGAA+TGG | 0.582233 | tig0018625:-5736 | None:intergenic |
| GCTCCGACCCAAGGAGCTGT+TGG | 0.582843 | tig0018625:-7517 | None:intergenic |
| CCTTCAGAATTATCAGCACT+AGG | 0.583333 | tig0018625:-11416 | None:intergenic |
| AATTTATCAATGATTGCTGA+TGG | 0.586752 | tig0018625:+12728 | Msa1368180:three_prime_UTR |
| ACAGAATTGTTGCTTTACAA+GGG | 0.587625 | tig0018625:+11033 | Msa1368180:CDS |
| TGCTTGGGAATGTTGGAAGT+GGG | 0.588529 | tig0018625:-5752 | None:intergenic |
| TTAATTGCTGTCAATATCAG+TGG | 0.589341 | tig0018625:+11611 | Msa1368180:CDS |
| GAAGGAAACATGGATTCTGT+TGG | 0.589437 | tig0018625:+8565 | Msa1368180:CDS |
| AGAAATGCAAGAAGGAAACA+TGG | 0.598978 | tig0018625:+8555 | Msa1368180:CDS |
| TGGATAATGGCTCAAATACA+GGG | 0.600302 | tig0018625:+11348 | Msa1368180:CDS |
| TGAACAAAGGGTCATTACAA+TGG | 0.602947 | tig0018625:-5863 | None:intergenic |
| GATTAAGCAGTTCTCGTTAG+GGG | 0.603380 | tig0018625:+6666 | Msa1368180:CDS |
| GATTTAACACCATCAACGAC+AGG | 0.604084 | tig0018625:-8529 | None:intergenic |
| GAATGAAGAAAGATTGGACA+CGG | 0.604204 | tig0018625:-5690 | None:intergenic |
| TCTGAAACAGGGTTTACCAA+AGG | 0.606194 | tig0018625:+11323 | Msa1368180:CDS |
| GGATTTGCAGAGGAAAGAGT+CGG | 0.606583 | tig0018625:+6513 | Msa1368180:CDS |
| TCAACATTCCTAACAGACAA+AGG | 0.608428 | tig0018625:-6694 | None:intergenic |
| TCGAGCATCCACAAGAGTCA+CGG | 0.610176 | tig0018625:-8596 | None:intergenic |
| AATTCTGAAGGTTCTTCTGG+AGG | 0.615378 | tig0018625:+11428 | Msa1368180:CDS |
| TTTACGAAAGGGCTCGTCTG+GGG | 0.616659 | tig0018625:+11067 | Msa1368180:CDS |
| TGCAGCAGAACACCATCTCA+AGG | 0.617146 | tig0018625:-11650 | None:intergenic |
| CTGTTAGGAATGTTGAACGT+AGG | 0.617986 | tig0018625:+6701 | Msa1368180:CDS |
| GCAAATGTCACTGATACGAT+GGG | 0.619729 | tig0018625:+11206 | Msa1368180:CDS |
| TTCGCTAATTCTGCTAAAAG+GGG | 0.623857 | tig0018625:+6136 | Msa1368180:CDS |
| GAGCACCTCCAGTATACCTA+AGG | 0.624172 | tig0018625:-7384 | None:intergenic |
| AAATCTGGAGAAATGCAAGA+AGG | 0.625821 | tig0018625:+8547 | Msa1368180:CDS |
| ATGCATGAGTACTGCTGTGG+AGG | 0.628155 | tig0018625:+12483 | Msa1368180:three_prime_UTR |
| AAAATCTCCTGTTGCCAATG+CGG | 0.628618 | tig0018625:+11382 | Msa1368180:CDS |
| TTTGACTATTGGTACTGGAG+AGG | 0.632633 | tig0018625:+9631 | Msa1368180:CDS |
| GTAGACAAAAGAATGAACAA+AGG | 0.632685 | tig0018625:-5876 | None:intergenic |
| AACATATAAAGCATATGTGG+AGG | 0.636889 | tig0018625:+11106 | Msa1368180:CDS |
| ATACCAACAGCTCCTTGGGT+CGG | 0.637925 | tig0018625:+7514 | Msa1368180:CDS |
| TTGTTAGCGAAGAATTCCAA+GGG | 0.640177 | tig0018625:+11291 | Msa1368180:CDS |
| GGATAGTAGCATCTGAAACA+GGG | 0.653128 | tig0018625:+11312 | Msa1368180:CDS |
| ATTCCAAATTGGCATTCCAG+GGG | 0.656517 | tig0018625:-9445 | None:intergenic |
| AGAATTGTTGCTTTACAAGG+GGG | 0.665731 | tig0018625:+11035 | Msa1368180:CDS |
| GCAACGTTTCGGTTAATAGG+CGG | 0.668954 | tig0018625:-6343 | None:intergenic |
| CATACTGTAAATCATTGACA+CGG | 0.674498 | tig0018625:-6732 | None:intergenic |
| GGAAGATGACAAGACTGAGG+AGG | 0.675289 | tig0018625:+11133 | Msa1368180:CDS |
| TCAGAATTATCAGCACTAGG+AGG | 0.678287 | tig0018625:-11413 | None:intergenic |
| TATATGCATGAGTACTGCTG+TGG | 0.687428 | tig0018625:+12480 | Msa1368180:three_prime_UTR |
| TGAATGGATATGGATATGGA+TGG | 0.689626 | tig0018625:-5898 | None:intergenic |
| TGAGGAAGATGACAAGACTG+AGG | 0.700576 | tig0018625:+11130 | Msa1368180:CDS |
| TGGAGGAAAGCATCTACTAG+CGG | 0.704627 | tig0018625:+12500 | Msa1368180:three_prime_UTR |
| ATAGGCCTTAGGTATACTGG+AGG | 0.717784 | tig0018625:+7379 | Msa1368180:CDS |
| GATGAACTTGAAGTTGAAGG+CGG | 0.752430 | tig0018625:+6202 | Msa1368180:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAATCTATAATCTAA+AGG | - | tig0018625:11855-11874 | None:intergenic | 10.0% |
| !!! | TGAATTAATACTTTGAAATT+GGG | - | tig0018625:5812-5831 | None:intergenic | 15.0% |
| !!! | TTGAATTAATACTTTGAAAT+TGG | - | tig0018625:5813-5832 | None:intergenic | 15.0% |
| !! | AGAAATACAATTACTAAAAA+TGG | - | tig0018625:7256-7275 | None:intergenic | 15.0% |
| !!! | ATTTTTAGTAATTGTATTTC+TGG | + | tig0018625:7255-7274 | Msa1368180:intron | 15.0% |
| !!! | AAATATGTATTTTAAATGCA+AGG | - | tig0018625:7943-7962 | None:intergenic | 15.0% |
| !! | TTGTAAATGCATATTTAAAA+TGG | + | tig0018625:8122-8141 | Msa1368180:intron | 15.0% |
| !! | AACACAATAAATATTTAATC+TGG | - | tig0018625:8250-8269 | None:intergenic | 15.0% |
| !!! | TAGATTTTACCAAAAAAATA+AGG | - | tig0018625:8628-8647 | None:intergenic | 15.0% |
| !!! | ATTGCTGTTTTTTTTTTTTT+TGG | + | tig0018625:8673-8692 | Msa1368180:intron | 15.0% |
| !!! | TTTTATCCTCTAATATTATT+TGG | + | tig0018625:8803-8822 | Msa1368180:intron | 15.0% |
| !! | AAACAAATATAAGACAAAAT+GGG | - | tig0018625:9234-9253 | None:intergenic | 15.0% |
| !! | AAAACAAATATAAGACAAAA+TGG | - | tig0018625:9235-9254 | None:intergenic | 15.0% |
| !!! | ATATCTATAACATGTATTTT+TGG | + | tig0018625:9861-9880 | Msa1368180:intron | 15.0% |
| !! | GCTTAAATTATTTAATCTTA+CGG | + | tig0018625:10125-10144 | Msa1368180:intron | 15.0% |
| !!! | ATAGATTTTTTTTTCTCATA+TGG | + | tig0018625:11862-11881 | Msa1368180:intron | 15.0% |
| !! | CAATAATAAAATAGAATAAC+AGG | + | tig0018625:12630-12649 | Msa1368180:three_prime_UTR | 15.0% |
| !! | ATGTTATGAAGAAATTGAAT+TGG | - | tig0018625:5715-5734 | None:intergenic | 20.0% |
| !! | TTGAATTGAAGATGAATAAA+GGG | - | tig0018625:6086-6105 | None:intergenic | 20.0% |
| !! | TTTGAATTGAAGATGAATAA+AGG | - | tig0018625:6087-6106 | None:intergenic | 20.0% |
| !!! | AAATTTTACTACTTTTCAAG+AGG | + | tig0018625:6264-6283 | Msa1368180:CDS | 20.0% |
| !!! | TTTGTGTTTTTTTTCTTTGT+TGG | + | tig0018625:6373-6392 | Msa1368180:CDS | 20.0% |
| !!! | GTGTTGTTTTTGATAAATTA+TGG | + | tig0018625:6395-6414 | Msa1368180:CDS | 20.0% |
| !!! | TCATTTTTATATATGCTCAT+TGG | + | tig0018625:6919-6938 | Msa1368180:intron | 20.0% |
| !!! | TATTTTTTATTTTAGTGGAG+TGG | + | tig0018625:7709-7728 | Msa1368180:intron | 20.0% |
| !!! | AATATAATGTATTTTCCATC+TGG | + | tig0018625:7842-7861 | Msa1368180:intron | 20.0% |
| !! | ATCAAAATTAAAATACCAGA+TGG | - | tig0018625:7860-7879 | None:intergenic | 20.0% |
| !! | TTTATTGTGTTAATCGTAAA+TGG | + | tig0018625:8259-8278 | Msa1368180:intron | 20.0% |
| !!! | AAATCCAAAACAATTTTGTT+TGG | - | tig0018625:8472-8491 | None:intergenic | 20.0% |
| !!! | TTTAGTACTTTTATGTTATG+TGG | + | tig0018625:8756-8775 | Msa1368180:intron | 20.0% |
| !!! | TATATTAGTATCGATTAACA+TGG | + | tig0018625:8852-8871 | Msa1368180:intron | 20.0% |
| !!! | AATGATTTGTTCGTTTTTAT+TGG | + | tig0018625:9158-9177 | Msa1368180:intron | 20.0% |
| !! | AACAAATATAAGACAAAATG+GGG | - | tig0018625:9233-9252 | None:intergenic | 20.0% |
| !! | CAAATAAAAAAAATTGAGTG+GGG | - | tig0018625:9329-9348 | None:intergenic | 20.0% |
| !! | GCAAATAAAAAAAATTGAGT+GGG | - | tig0018625:9330-9349 | None:intergenic | 20.0% |
| !! | AGCAAATAAAAAAAATTGAG+TGG | - | tig0018625:9331-9350 | None:intergenic | 20.0% |
| !!! | TTTTTATTTGCTATTTTTCC+AGG | + | tig0018625:9339-9358 | Msa1368180:intron | 20.0% |
| !! | CGAGAAAATATTTGAAAAAT+TGG | - | tig0018625:9887-9906 | None:intergenic | 20.0% |
| !! | TAAATTATTTAATCTTACGG+AGG | + | tig0018625:10128-10147 | Msa1368180:intron | 20.0% |
| !!! | TCTTATTTGATAATGTTTTC+AGG | + | tig0018625:10974-10993 | Msa1368180:intron | 20.0% |
| !! | AAAACCTTGTTAAATCTTTA+TGG | - | tig0018625:11781-11800 | None:intergenic | 20.0% |
| !! | TAAAATAAGACAGAATGAAT+TGG | - | tig0018625:12139-12158 | None:intergenic | 20.0% |
| !!! | GAACATATCATTGTTATTAT+TGG | + | tig0018625:12178-12197 | Msa1368180:intron | 20.0% |
| !!! | TTATTTTACTATGATTGGAT+CGG | - | tig0018625:12208-12227 | None:intergenic | 20.0% |
| !!! | AGACTTTATTTTACTATGAT+TGG | - | tig0018625:12213-12232 | None:intergenic | 20.0% |
| !!! | TATTCTATTTTATTATTGCC+TGG | - | tig0018625:12628-12647 | None:intergenic | 20.0% |
| !! | TCTGAAGATAAAAAATAACA+AGG | + | tig0018625:12753-12772 | Msa1368180:three_prime_UTR | 20.0% |
| ! | AAATGTAAACTTGAATGCTT+GGG | - | tig0018625:5770-5789 | None:intergenic | 25.0% |
| ! | AAAATGTAAACTTGAATGCT+TGG | - | tig0018625:5771-5790 | None:intergenic | 25.0% |
| ! | TAGACAAAAGAATGAACAAA+GGG | - | tig0018625:5878-5897 | None:intergenic | 25.0% |
| ! | GTAAATTCCGTAGAAAAAAA+TGG | + | tig0018625:6059-6078 | Msa1368180:CDS | 25.0% |
| !!! | AATTATGGACTTTTAGAAGA+AGG | + | tig0018625:6410-6429 | Msa1368180:CDS | 25.0% |
| ! | AAAAACAGAGAAAAACTAGT+AGG | - | tig0018625:6487-6506 | None:intergenic | 25.0% |
| !!! | TACTAGTTTTTCTCTGTTTT+TGG | + | tig0018625:6486-6505 | Msa1368180:CDS | 25.0% |
| ! | TTCTTCAAATCATCAATAAC+AGG | - | tig0018625:6622-6641 | None:intergenic | 25.0% |
| ! | TTTAATGTTATCTGCTGAAA+AGG | + | tig0018625:6856-6875 | Msa1368180:intron | 25.0% |
| ! | TTAATGTTATCTGCTGAAAA+GGG | + | tig0018625:6857-6876 | Msa1368180:intron | 25.0% |
| !! | GCTTAAGTTAAATGTTTTGT+TGG | + | tig0018625:7110-7129 | Msa1368180:intron | 25.0% |
| ! | TTATCATATCTTCTGTAGAA+AGG | + | tig0018625:7211-7230 | Msa1368180:intron | 25.0% |
| !!! | TATACGCAATTTATTTTCCT+TGG | + | tig0018625:7339-7358 | Msa1368180:intron | 25.0% |
| ! | TAATACCAAATTTCAGAGAA+AGG | - | tig0018625:7423-7442 | None:intergenic | 25.0% |
| !!! | ATTAAGTTGAACAAACGAAA+TGG | - | tig0018625:7592-7611 | None:intergenic | 25.0% |
| ! | ATTTCGTTTGTTCAACTTAA+TGG | + | tig0018625:7591-7610 | Msa1368180:CDS | 25.0% |
| ! | TTTCGTTTGTTCAACTTAAT+GGG | + | tig0018625:7592-7611 | Msa1368180:CDS | 25.0% |
| !!! | AAGTTTTAACCCAATAGTTT+GGG | - | tig0018625:7804-7823 | None:intergenic | 25.0% |
| ! | AAACTATTGGGTTAAAACTT+GGG | + | tig0018625:7804-7823 | Msa1368180:intron | 25.0% |
| !!! | TTTCTTCTTTTTTGCATCAT+TGG | + | tig0018625:8004-8023 | Msa1368180:intron | 25.0% |
| !!! | TTCTTCTTTTTTGCATCATT+GGG | + | tig0018625:8005-8024 | Msa1368180:intron | 25.0% |
| ! | CTAACTGTATGTAATTATTC+TGG | + | tig0018625:8383-8402 | Msa1368180:intron | 25.0% |
| ! | TAAATCTACTGTAAGAAGTT+TGG | - | tig0018625:8431-8450 | None:intergenic | 25.0% |
| ! | ATTTACCTAGACTATTTGTA+CGG | + | tig0018625:8446-8465 | Msa1368180:CDS | 25.0% |
| ! | TTGGATTATTTGTAGTAGAT+TGG | + | tig0018625:8692-8711 | Msa1368180:intron | 25.0% |
| ! | TGGATTATTTGTAGTAGATT+GGG | + | tig0018625:8693-8712 | Msa1368180:intron | 25.0% |
| ! | TGTGAACCAAATAATATTAG+AGG | - | tig0018625:8812-8831 | None:intergenic | 25.0% |
| !!! | GTTATTAGTATCGATTAACA+TGG | + | tig0018625:8914-8933 | Msa1368180:intron | 25.0% |
| ! | ATGAATATTCTCTATAGAAG+AGG | + | tig0018625:9047-9066 | Msa1368180:intron | 25.0% |
| !! | TCATAACTAAAACGTAGTTT+TGG | + | tig0018625:9189-9208 | Msa1368180:intron | 25.0% |
| ! | ATTTCACATTATTTCCTAAC+TGG | - | tig0018625:9291-9310 | None:intergenic | 25.0% |
| ! | AGTATAAACAAAGATGAATC+AGG | - | tig0018625:9491-9510 | None:intergenic | 25.0% |
| !!! | ATACTTAACTTCTGCTTTTT+CGG | - | tig0018625:9581-9600 | None:intergenic | 25.0% |
| !! | ATATTTTCTCGTTAAAAGTC+TGG | + | tig0018625:9896-9915 | Msa1368180:intron | 25.0% |
| ! | TTAACTCTGTTCAATTCATA+AGG | - | tig0018625:10033-10052 | None:intergenic | 25.0% |
| !!! | TTTGGGCTTCTTATTTTTAA+AGG | - | tig0018625:10287-10306 | None:intergenic | 25.0% |
| ! | TTTAAAAATAAGAAGCCCAA+AGG | + | tig0018625:10286-10305 | Msa1368180:intron | 25.0% |
| ! | AACACAAATTTAATGGCAAA+AGG | - | tig0018625:10528-10547 | None:intergenic | 25.0% |
| ! | AAGACTATACTACATCTAAA+TGG | - | tig0018625:10697-10716 | None:intergenic | 25.0% |
| !! | AATATTGTGTGTTTTGCAAT+GGG | - | tig0018625:10751-10770 | None:intergenic | 25.0% |
| ! | AAAACACACAATATTCTGAA+TGG | + | tig0018625:10756-10775 | Msa1368180:intron | 25.0% |
| ! | TGTTTGCAATTGATTAAGAA+TGG | + | tig0018625:10926-10945 | Msa1368180:intron | 25.0% |
| !!! | ATAATGTTTTCAGGTTGATT+TGG | + | tig0018625:10983-11002 | Msa1368180:intron | 25.0% |
| !!! | TAATGTTTTCAGGTTGATTT+GGG | + | tig0018625:10984-11003 | Msa1368180:intron | 25.0% |
| ! | ATAAATGATTCTTTATCTGC+CGG | - | tig0018625:11251-11270 | None:intergenic | 25.0% |
| !! | AGAATCATTTATGGATGTTT+TGG | + | tig0018625:11259-11278 | Msa1368180:CDS | 25.0% |
| !! | AATTAGAGATTCTAAGAGTA+TGG | - | tig0018625:11456-11475 | None:intergenic | 25.0% |
| ! | TTATAAATATGGCCTAACAA+GGG | - | tig0018625:12027-12046 | None:intergenic | 25.0% |
| ! | TTGTTAGGCCATATTTATAA+GGG | + | tig0018625:12027-12046 | Msa1368180:intron | 25.0% |
| ! | TGAAACAACCCTTATAAATA+TGG | - | tig0018625:12038-12057 | None:intergenic | 25.0% |
| !!! | TCTTATTTTAAACAATCCCA+AGG | + | tig0018625:12149-12168 | Msa1368180:intron | 25.0% |
| !!! | CTTATTTTAAACAATCCCAA+GGG | + | tig0018625:12150-12169 | Msa1368180:intron | 25.0% |
| !! | TATTTTACTATGATTGGATC+GGG | - | tig0018625:12207-12226 | None:intergenic | 25.0% |
| !!! | AAAACTGACGTTATTTCTTA+AGG | - | tig0018625:12276-12295 | None:intergenic | 25.0% |
| ! | CACTAAAAGTTGTTAATTGT+GGG | + | tig0018625:12372-12391 | Msa1368180:intron | 25.0% |
| !!! | AACGATATTGTTTTTTTACC+AGG | + | tig0018625:12607-12626 | Msa1368180:three_prime_UTR | 25.0% |
| ! | AATTTATCAATGATTGCTGA+TGG | + | tig0018625:12728-12747 | Msa1368180:three_prime_UTR | 25.0% |
| GAATTGGAATGAAGAAAGAT+TGG | - | tig0018625:5699-5718 | None:intergenic | 30.0% | |
| !! | TACTTTGAAATTGGGATTTG+TGG | - | tig0018625:5804-5823 | None:intergenic | 30.0% |
| GTAGACAAAAGAATGAACAA+AGG | - | tig0018625:5879-5898 | None:intergenic | 30.0% | |
| ATCATGAATGGATATGGATA+TGG | - | tig0018625:5905-5924 | None:intergenic | 30.0% | |
| TGAAGAATCATGAATGGATA+TGG | - | tig0018625:5911-5930 | None:intergenic | 30.0% | |
| !!! | TTTTTCATGGTTTTGGAAAG+GGG | - | tig0018625:6010-6029 | None:intergenic | 30.0% |
| !!! | CTTTTTCATGGTTTTGGAAA+GGG | - | tig0018625:6011-6030 | None:intergenic | 30.0% |
| !!! | TGAAAATAAGCGCTTTTTCA+TGG | - | tig0018625:6023-6042 | None:intergenic | 30.0% |
| !!! | AAAGGGTCCATTTTTTTCTA+CGG | - | tig0018625:6069-6088 | None:intergenic | 30.0% |
| ! | AGAATTAGCGAATTTTGGAT+GGG | - | tig0018625:6128-6147 | None:intergenic | 30.0% |
| ! | TTAGCAGAATTAGCGAATTT+TGG | - | tig0018625:6133-6152 | None:intergenic | 30.0% |
| AATTCGCTAATTCTGCTAAA+AGG | + | tig0018625:6134-6153 | Msa1368180:CDS | 30.0% | |
| ATTCGCTAATTCTGCTAAAA+GGG | + | tig0018625:6135-6154 | Msa1368180:CDS | 30.0% | |
| AATGATGAACTTGAAGTTGA+AGG | + | tig0018625:6199-6218 | Msa1368180:CDS | 30.0% | |
| GATAAGCTTAGAACTCAATT+GGG | + | tig0018625:6298-6317 | Msa1368180:CDS | 30.0% | |
| !!! | TTTTTCTCTGTTTTTGGAGA+AGG | + | tig0018625:6492-6511 | Msa1368180:CDS | 30.0% |
| GACTTGAGAATTGGATTATT+GGG | + | tig0018625:6587-6606 | Msa1368180:CDS | 30.0% | |
| CATACTGTAAATCATTGACA+CGG | - | tig0018625:6735-6754 | None:intergenic | 30.0% | |
| !! | ATGAAGTCATTTTCAAACTG+AGG | + | tig0018625:6892-6911 | Msa1368180:intron | 30.0% |
| !!! | AAAGGATCAGTTTTGGATTT+TGG | + | tig0018625:7229-7248 | Msa1368180:intron | 30.0% |
| TTTCTGGATTTATATTCCTG+AGG | + | tig0018625:7271-7290 | Msa1368180:intron | 30.0% | |
| ! | GTTTTATCTAGATACCAGAT+AGG | + | tig0018625:7361-7380 | Msa1368180:intron | 30.0% |
| !! | TTAAGCCTTTCTCTGAAATT+TGG | + | tig0018625:7415-7434 | Msa1368180:CDS | 30.0% |
| !!! | TTTTTATTTTAGTGGAGTGG+TGG | + | tig0018625:7712-7731 | Msa1368180:intron | 30.0% |
| !! | CAAGTTTTAACCCAATAGTT+TGG | - | tig0018625:7805-7824 | None:intergenic | 30.0% |
| CAAACTATTGGGTTAAAACT+TGG | + | tig0018625:7803-7822 | Msa1368180:intron | 30.0% | |
| AACTATTGGGTTAAAACTTG+GGG | + | tig0018625:7805-7824 | Msa1368180:intron | 30.0% | |
| ATTAGAAAGTAACTGCACTT+TGG | + | tig0018625:8210-8229 | Msa1368180:intron | 30.0% | |
| ! | GTTATGGATTATCTCTAGAT+TGG | + | tig0018625:8334-8353 | Msa1368180:intron | 30.0% |
| TAATTACATACAGTTAGTGC+AGG | - | tig0018625:8380-8399 | None:intergenic | 30.0% | |
| GTCAAAAACCTACAAGAAAA+AGG | - | tig0018625:8409-8428 | None:intergenic | 30.0% | |
| !!! | AATTGTTTTGGATTTCGAGA+AGG | + | tig0018625:8477-8496 | Msa1368180:CDS | 30.0% |
| !!! | ATTGTTTTGGATTTCGAGAA+GGG | + | tig0018625:8478-8497 | Msa1368180:CDS | 30.0% |
| !!! | CGAAAGCTTCCTTATTTTTT+TGG | + | tig0018625:8616-8635 | Msa1368180:CDS | 30.0% |
| AAACGAAGAGAAATTACTCA+AGG | - | tig0018625:9135-9154 | None:intergenic | 30.0% | |
| ATTCTTGTGAATACTGAAAC+TGG | - | tig0018625:9267-9286 | None:intergenic | 30.0% | |
| TATTCACAAGAATACCAGTT+AGG | + | tig0018625:9274-9293 | Msa1368180:intron | 30.0% | |
| TGTGAATACAACGGAAAATA+TGG | - | tig0018625:9518-9537 | None:intergenic | 30.0% | |
| !!! | TACTTAACTTCTGCTTTTTC+GGG | - | tig0018625:9580-9599 | None:intergenic | 30.0% |
| GAAGTTAAGTATCCAAGTTA+AGG | + | tig0018625:9589-9608 | Msa1368180:CDS | 30.0% | |
| !! | TGTGCAATACCAAAAGTATT+TGG | + | tig0018625:9665-9684 | Msa1368180:intron | 30.0% |
| !! | GTGCAATACCAAAAGTATTT+GGG | + | tig0018625:9666-9685 | Msa1368180:intron | 30.0% |
| !!! | TACCAAAAGTATTTGGGTTT+TGG | + | tig0018625:9672-9691 | Msa1368180:intron | 30.0% |
| ACTAATAAGTAGAGATCACA+AGG | - | tig0018625:9710-9729 | None:intergenic | 30.0% | |
| TGACTCATTATTATTGCATG+TGG | + | tig0018625:9935-9954 | Msa1368180:intron | 30.0% | |
| TAAGCAAAGATGTGCTTATT+AGG | + | tig0018625:9969-9988 | Msa1368180:intron | 30.0% | |
| CCAGAAAATATTCTACCTTT+GGG | - | tig0018625:10304-10323 | None:intergenic | 30.0% | |
| AGCTTTCAATGTGTAATGAA+GGG | + | tig0018625:10350-10369 | Msa1368180:intron | 30.0% | |
| AATGGCAAAAGGATAAAAGA+AGG | - | tig0018625:10517-10536 | None:intergenic | 30.0% | |
| ACAGAGGAACACAAATTTAA+TGG | - | tig0018625:10535-10554 | None:intergenic | 30.0% | |
| ATTTGTGTTCCTCTGTTATA+AGG | + | tig0018625:10539-10558 | Msa1368180:intron | 30.0% | |
| GAAAAGTTATGCAGCAAAAA+GGG | - | tig0018625:10574-10593 | None:intergenic | 30.0% | |
| TGGCATGAAAATAGTTAACA+TGG | - | tig0018625:10677-10696 | None:intergenic | 30.0% | |
| ! | ATATTGTGTGTTTTGCAATG+GGG | - | tig0018625:10750-10769 | None:intergenic | 30.0% |
| ! | GAATATTGTGTGTTTTGCAA+TGG | - | tig0018625:10752-10771 | None:intergenic | 30.0% |
| !! | ACAGAATTGTTGCTTTACAA+GGG | + | tig0018625:11033-11052 | Msa1368180:CDS | 30.0% |
| GCTAACATATAAAGCATATG+TGG | + | tig0018625:11103-11122 | Msa1368180:CDS | 30.0% | |
| AACATATAAAGCATATGTGG+AGG | + | tig0018625:11106-11125 | Msa1368180:CDS | 30.0% | |
| ! | GTCTGAAACATCTATATCAA+TGG | - | tig0018625:11162-11181 | None:intergenic | 30.0% |
| TAAATGATTCTTTATCTGCC+GGG | - | tig0018625:11250-11269 | None:intergenic | 30.0% | |
| GGCAGATAAAGAATCATTTA+TGG | + | tig0018625:11250-11269 | Msa1368180:CDS | 30.0% | |
| TTTACCAAAGGTTTGGATAA+TGG | + | tig0018625:11335-11354 | Msa1368180:CDS | 30.0% | |
| CTAATTTAAGCTGTCTAACA+TGG | + | tig0018625:11470-11489 | Msa1368180:intron | 30.0% | |
| GAAAGTTAAACTTCAATGCA+GGG | + | tig0018625:11546-11565 | Msa1368180:intron | 30.0% | |
| TTAATTGCTGTCAATATCAG+TGG | + | tig0018625:11611-11630 | Msa1368180:CDS | 30.0% | |
| CTTGTTAAATCTTTATGGCA+TGG | - | tig0018625:11776-11795 | None:intergenic | 30.0% | |
| CATGCCATAAAGATTTAACA+AGG | + | tig0018625:11774-11793 | Msa1368180:intron | 30.0% | |
| !!! | TTTTTTTTCTCATATGGCGT+CGG | + | tig0018625:11868-11887 | Msa1368180:intron | 30.0% |
| TGAGATAAAGCAGATTGAAA+TGG | + | tig0018625:11981-12000 | Msa1368180:intron | 30.0% | |
| TAAAGCAGATTGAAATGGAA+TGG | + | tig0018625:11986-12005 | Msa1368180:intron | 30.0% | |
| GAATTTACTATTCCCTTGTT+AGG | + | tig0018625:12012-12031 | Msa1368180:intron | 30.0% | |
| CTTATAAATATGGCCTAACA+AGG | - | tig0018625:12028-12047 | None:intergenic | 30.0% | |
| CTTGTTAGGCCATATTTATA+AGG | + | tig0018625:12026-12045 | Msa1368180:intron | 30.0% | |
| GCAAAAAAAAAGTGGAGTAT+TGG | + | tig0018625:12081-12100 | Msa1368180:intron | 30.0% | |
| !! | GAGTATTGGATGTAATGAAA+TGG | + | tig0018625:12095-12114 | Msa1368180:intron | 30.0% |
| CAGAATGAATTGGAATATGA+TGG | - | tig0018625:12129-12148 | None:intergenic | 30.0% | |
| ! | ATTTTACTATGATTGGATCG+GGG | - | tig0018625:12206-12225 | None:intergenic | 30.0% |
| ! | CCACAATTAACAACTTTTAG+TGG | - | tig0018625:12374-12393 | None:intergenic | 30.0% |
| CCACTAAAAGTTGTTAATTG+TGG | + | tig0018625:12371-12390 | Msa1368180:intron | 30.0% | |
| AAAGTCACAGACAAGTAAAA+TGG | - | tig0018625:12665-12684 | None:intergenic | 30.0% | |
| TCATTATTCGCATATTGGAA+AGG | - | tig0018625:12696-12715 | None:intergenic | 30.0% | |
| AGTCATCATTATTCGCATAT+TGG | - | tig0018625:12701-12720 | None:intergenic | 30.0% | |
| AAATAACAAGGCAATCAGAA+TGG | + | tig0018625:12765-12784 | Msa1368180:three_prime_UTR | 30.0% | |
| GAATGAAGAAAGATTGGACA+CGG | - | tig0018625:5693-5712 | None:intergenic | 35.0% | |
| TGAACAAAGGGTCATTACAA+TGG | - | tig0018625:5866-5885 | None:intergenic | 35.0% | |
| TGAATGGATATGGATATGGA+TGG | - | tig0018625:5901-5920 | None:intergenic | 35.0% | |
| ! | GCTTGTTGAAGAATCATGAA+TGG | - | tig0018625:5917-5936 | None:intergenic | 35.0% |
| CAAAGAGAGAAGTGAAAAGT+AGG | - | tig0018625:5944-5963 | None:intergenic | 35.0% | |
| ! | GAAGCATAATTGTTGTTGCA+GGG | - | tig0018625:5968-5987 | None:intergenic | 35.0% |
| !!! | GCTTTTTCATGGTTTTGGAA+AGG | - | tig0018625:6012-6031 | None:intergenic | 35.0% |
| !!! | TAAGCGCTTTTTCATGGTTT+TGG | - | tig0018625:6017-6036 | None:intergenic | 35.0% |
| ! | CAGAATTAGCGAATTTTGGA+TGG | - | tig0018625:6129-6148 | None:intergenic | 35.0% |
| TTCGCTAATTCTGCTAAAAG+GGG | + | tig0018625:6136-6155 | Msa1368180:CDS | 35.0% | |
| !! | TTTTCAAGAGGATCCAATTG+TGG | + | tig0018625:6276-6295 | Msa1368180:CDS | 35.0% |
| ! | GTTCTAAGCTTATCCACAAT+TGG | - | tig0018625:6292-6311 | None:intergenic | 35.0% |
| GGATAAGCTTAGAACTCAAT+TGG | + | tig0018625:6297-6316 | Msa1368180:CDS | 35.0% | |
| !! | TATGGACTTTTAGAAGAAGG+AGG | + | tig0018625:6413-6432 | Msa1368180:CDS | 35.0% |
| ! | AATGGGTGAATATGGTGTTA+GGG | + | tig0018625:6539-6558 | Msa1368180:CDS | 35.0% |
| AAGTTGTGGAAGGTTTATAG+AGG | + | tig0018625:6562-6581 | Msa1368180:CDS | 35.0% | |
| GGACTTGAGAATTGGATTAT+TGG | + | tig0018625:6586-6605 | Msa1368180:CDS | 35.0% | |
| AGAAGCCTGATTATGTTGAA+AGG | + | tig0018625:6638-6657 | Msa1368180:CDS | 35.0% | |
| GAAGCCTGATTATGTTGAAA+GGG | + | tig0018625:6639-6658 | Msa1368180:CDS | 35.0% | |
| TCAACCCTTTCAACATAATC+AGG | - | tig0018625:6646-6665 | None:intergenic | 35.0% | |
| AGATTAAGCAGTTCTCGTTA+GGG | + | tig0018625:6665-6684 | Msa1368180:CDS | 35.0% | |
| TCAACATTCCTAACAGACAA+AGG | - | tig0018625:6697-6716 | None:intergenic | 35.0% | |
| TACTCATCAAATTCTCATCC+AGG | + | tig0018625:6947-6966 | Msa1368180:intron | 35.0% | |
| ACTCATCAAATTCTCATCCA+GGG | + | tig0018625:6948-6967 | Msa1368180:intron | 35.0% | |
| TACATTAACTAAAACAGCCC+TGG | - | tig0018625:6968-6987 | None:intergenic | 35.0% | |
| ATGATGAGAAGACAATGACA+TGG | + | tig0018625:7002-7021 | Msa1368180:intron | 35.0% | |
| ! | AAAAAAGTGGAGTACCAAGA+GGG | - | tig0018625:7033-7052 | None:intergenic | 35.0% |
| ! | TCTGTAGAAAGGATCAGTTT+TGG | + | tig0018625:7222-7241 | Msa1368180:intron | 35.0% |
| ATTTATATTCCTGAGGTCTG+AGG | + | tig0018625:7278-7297 | Msa1368180:intron | 35.0% | |
| CTGGTATCTAGATAAAACCA+AGG | - | tig0018625:7359-7378 | None:intergenic | 35.0% | |
| ATTCCAATTGTTGTACCTGT+TGG | + | tig0018625:7442-7461 | Msa1368180:CDS | 35.0% | |
| !! | GTTCGAGATTTTGACATTGA+TGG | + | tig0018625:7466-7485 | Msa1368180:CDS | 35.0% |
| !! | TTGACATTGATGGTGAACTT+TGG | + | tig0018625:7476-7495 | Msa1368180:CDS | 35.0% |
| !! | TGACATTGATGGTGAACTTT+GGG | + | tig0018625:7477-7496 | Msa1368180:CDS | 35.0% |
| ATTAATACCAACAGCTCCTT+GGG | + | tig0018625:7510-7529 | Msa1368180:CDS | 35.0% | |
| GACAGTTCAAACTTGATCTT+TGG | - | tig0018625:7568-7587 | None:intergenic | 35.0% | |
| AAACAACTCTCCCAAACTAT+TGG | + | tig0018625:7791-7810 | Msa1368180:intron | 35.0% | |
| AACAACTCTCCCAAACTATT+GGG | + | tig0018625:7792-7811 | Msa1368180:intron | 35.0% | |
| CATAACGATGAAGAGAAACA+AGG | - | tig0018625:8320-8339 | None:intergenic | 35.0% | |
| ! | CTTGTTTCTCTTCATCGTTA+TGG | + | tig0018625:8318-8337 | Msa1368180:intron | 35.0% |
| !! | TATTCTGGCCTTTTTCTTGT+AGG | + | tig0018625:8398-8417 | Msa1368180:intron | 35.0% |
| ! | ACGGCCAAACAAAATTGTTT+TGG | + | tig0018625:8465-8484 | Msa1368180:CDS | 35.0% |
| AAATCTGGAGAAATGCAAGA+AGG | + | tig0018625:8547-8566 | Msa1368180:CDS | 35.0% | |
| AGAAATGCAAGAAGGAAACA+TGG | + | tig0018625:8555-8574 | Msa1368180:CDS | 35.0% | |
| GTTATGTGGACAATGTTATG+TGG | + | tig0018625:8770-8789 | Msa1368180:intron | 35.0% | |
| AACAGTCAAACTACTGTCAT+TGG | + | tig0018625:9420-9439 | Msa1368180:CDS | 35.0% | |
| AACAACACCTGATTCCAAAT+TGG | - | tig0018625:9459-9478 | None:intergenic | 35.0% | |
| GCTAGAACATGTGAATACAA+CGG | - | tig0018625:9527-9546 | None:intergenic | 35.0% | |
| GGATTTGCAGATTTGACTAT+TGG | + | tig0018625:9620-9639 | Msa1368180:CDS | 35.0% | |
| ! | CACCAAAACCCAAATACTTT+TGG | - | tig0018625:9677-9696 | None:intergenic | 35.0% |
| ! | TCATCTAAGATCACCAATTC+TGG | - | tig0018625:10071-10090 | None:intergenic | 35.0% |
| !! | TGAATGCTTTGGAGTGTATA+GGG | + | tig0018625:10183-10202 | Msa1368180:intron | 35.0% |
| ! | CCCAAAGGTAGAATATTTTC+TGG | + | tig0018625:10301-10320 | Msa1368180:intron | 35.0% |
| GCCAGAAAATATTCTACCTT+TGG | - | tig0018625:10305-10324 | None:intergenic | 35.0% | |
| CAGCTTTCAATGTGTAATGA+AGG | + | tig0018625:10349-10368 | Msa1368180:intron | 35.0% | |
| GCTTTCAATGTGTAATGAAG+GGG | + | tig0018625:10351-10370 | Msa1368180:intron | 35.0% | |
| GGAAAAAGTTGGATGTTCAT+GGG | + | tig0018625:10383-10402 | Msa1368180:intron | 35.0% | |
| CGAAAAGTTATGCAGCAAAA+AGG | - | tig0018625:10575-10594 | None:intergenic | 35.0% | |
| TGTCAACTACTCTCTTTGAT+GGG | - | tig0018625:10612-10631 | None:intergenic | 35.0% | |
| TTGTCAACTACTCTCTTTGA+TGG | - | tig0018625:10613-10632 | None:intergenic | 35.0% | |
| ACATCACTACTTTGATGCAA+GGG | - | tig0018625:10849-10868 | None:intergenic | 35.0% | |
| AACATCACTACTTTGATGCA+AGG | - | tig0018625:10850-10869 | None:intergenic | 35.0% | |
| !!! | AGAATGGAGCTATTTTTTCC+TGG | + | tig0018625:10942-10961 | Msa1368180:intron | 35.0% |
| !!! | GAATGGAGCTATTTTTTCCT+GGG | + | tig0018625:10943-10962 | Msa1368180:intron | 35.0% |
| CAAATAAGAAACATACACCC+AGG | - | tig0018625:10963-10982 | None:intergenic | 35.0% | |
| AAAGCAACAATTCTGTCTGT+TGG | - | tig0018625:11029-11048 | None:intergenic | 35.0% | |
| !! | GACAGAATTGTTGCTTTACA+AGG | + | tig0018625:11032-11051 | Msa1368180:CDS | 35.0% |
| !! | CAGAATTGTTGCTTTACAAG+GGG | + | tig0018625:11034-11053 | Msa1368180:CDS | 35.0% |
| !! | AGAATTGTTGCTTTACAAGG+GGG | + | tig0018625:11035-11054 | Msa1368180:CDS | 35.0% |
| ATTGTTAGCGAAGAATTCCA+AGG | + | tig0018625:11290-11309 | Msa1368180:CDS | 35.0% | |
| TTGTTAGCGAAGAATTCCAA+GGG | + | tig0018625:11291-11310 | Msa1368180:CDS | 35.0% | |
| ! | TTGGATAATGGCTCAAATAC+AGG | + | tig0018625:11347-11366 | Msa1368180:CDS | 35.0% |
| ! | TGGATAATGGCTCAAATACA+GGG | + | tig0018625:11348-11367 | Msa1368180:CDS | 35.0% |
| ! | GATAATTCTGAAGGTTCTTC+TGG | + | tig0018625:11425-11444 | Msa1368180:CDS | 35.0% |
| CGAAAGTTAAACTTCAATGC+AGG | + | tig0018625:11545-11564 | Msa1368180:intron | 35.0% | |
| AATCACAGCAAGCCAAAATA+AGG | - | tig0018625:11576-11595 | None:intergenic | 35.0% | |
| AGTATCTTCAATCCTTGAGA+TGG | + | tig0018625:11638-11657 | Msa1368180:exon | 35.0% | |
| TCATTCCATATCCACCAAAT+CGG | + | tig0018625:12055-12074 | Msa1368180:intron | 35.0% | |
| !!! | TTTTTTTTTGCTCGCCGATT+TGG | - | tig0018625:12072-12091 | None:intergenic | 35.0% |
| ! | ATTTTAAACAATCCCAAGGG+TGG | + | tig0018625:12153-12172 | Msa1368180:intron | 35.0% |
| ACAATATTGTGCACTTCCAT+TGG | + | tig0018625:12300-12319 | Msa1368180:intron | 35.0% | |
| TAAGCAGTTGAACTATCCAA+TGG | - | tig0018625:12319-12338 | None:intergenic | 35.0% | |
| !! | GCTTTTTCTTTTATCCTGAC+AGG | + | tig0018625:12394-12413 | Msa1368180:intron | 35.0% |
| !! | AGATTGGACACGGTTTTAGT+GGG | - | tig0018625:5683-5702 | None:intergenic | 40.0% |
| !! | AAGATTGGACACGGTTTTAG+TGG | - | tig0018625:5684-5703 | None:intergenic | 40.0% |
| ACTTGAATGCTTGGGAATGT+TGG | - | tig0018625:5762-5781 | None:intergenic | 40.0% | |
| ! | GGAAGCATAATTGTTGTTGC+AGG | - | tig0018625:5969-5988 | None:intergenic | 40.0% |
| GGGAAAGGAAAGAAGAGAAT+TGG | - | tig0018625:5990-6009 | None:intergenic | 40.0% | |
| GATGAACTTGAAGTTGAAGG+CGG | + | tig0018625:6202-6221 | Msa1368180:CDS | 40.0% | |
| AGGGATTCACAGGTTCAATT+GGG | + | tig0018625:6238-6257 | Msa1368180:CDS | 40.0% | |
| CAAACAAACCAGCAACGTTT+CGG | - | tig0018625:6357-6376 | None:intergenic | 40.0% | |
| GAGGAACAAAGTTAGTAGTG+AGG | + | tig0018625:6432-6451 | Msa1368180:CDS | 40.0% | |
| ! | AGTAGTGAGGATAGTTTTCG+CGG | + | tig0018625:6445-6464 | Msa1368180:CDS | 40.0% |
| GAAAAACTAGTAGGCACTTG+CGG | - | tig0018625:6478-6497 | None:intergenic | 40.0% | |
| !! | TTTTGGAGAAGGATTTGCAG+AGG | + | tig0018625:6503-6522 | Msa1368180:CDS | 40.0% |
| GAATGGGTGAATATGGTGTT+AGG | + | tig0018625:6538-6557 | Msa1368180:CDS | 40.0% | |
| ! | ATATGGTGTTAGGGAAGTTG+TGG | + | tig0018625:6548-6567 | Msa1368180:CDS | 40.0% |
| TTGTGGAAGGTTTATAGAGG+TGG | + | tig0018625:6565-6584 | Msa1368180:CDS | 40.0% | |
| ! | ATAGAGGTGGACTTGAGAAT+TGG | + | tig0018625:6578-6597 | Msa1368180:CDS | 40.0% |
| GAGATTAAGCAGTTCTCGTT+AGG | + | tig0018625:6664-6683 | Msa1368180:CDS | 40.0% | |
| GATTAAGCAGTTCTCGTTAG+GGG | + | tig0018625:6666-6685 | Msa1368180:CDS | 40.0% | |
| CTGTTAGGAATGTTGAACGT+AGG | + | tig0018625:6701-6720 | Msa1368180:CDS | 40.0% | |
| ATGACATGGTATTTCCCTCT+TGG | + | tig0018625:7016-7035 | Msa1368180:intron | 40.0% | |
| ! | CAAAAAAGTGGAGTACCAAG+AGG | - | tig0018625:7034-7053 | None:intergenic | 40.0% |
| !!! | CTTGGTACTCCACTTTTTTG+TGG | + | tig0018625:7034-7053 | Msa1368180:intron | 40.0% |
| ! | CTGAGGCTATTGTGTGTTTT+AGG | + | tig0018625:7295-7314 | Msa1368180:intron | 40.0% |
| ACACCAACAGGTACAACAAT+TGG | - | tig0018625:7448-7467 | None:intergenic | 40.0% | |
| TCAAAATCTCGAACACCAAC+AGG | - | tig0018625:7460-7479 | None:intergenic | 40.0% | |
| GATTAATACCAACAGCTCCT+TGG | + | tig0018625:7509-7528 | Msa1368180:CDS | 40.0% | |
| AAGCACTCAGATCGTAAAAG+AGG | - | tig0018625:7644-7663 | None:intergenic | 40.0% | |
| !!! | TTATTTTAGTGGAGTGGTGG+TGG | + | tig0018625:7715-7734 | Msa1368180:intron | 40.0% |
| TGGTAACACTCTTGATCACT+TGG | + | tig0018625:7741-7760 | Msa1368180:intron | 40.0% | |
| !!! | CTTTTTTGCATCATTGGGCA+TGG | + | tig0018625:8010-8029 | Msa1368180:intron | 40.0% |
| GAAACTTACATCGAGAGAAC+TGG | - | tig0018625:8045-8064 | None:intergenic | 40.0% | |
| ! | GATTATCTCTAGATTGGCTG+TGG | + | tig0018625:8340-8359 | Msa1368180:intron | 40.0% |
| ! | TCTAGATTGGCTGTGGAAAT+TGG | + | tig0018625:8347-8366 | Msa1368180:intron | 40.0% |
| TTTGGCCGTACAAATAGTCT+AGG | - | tig0018625:8454-8473 | None:intergenic | 40.0% | |
| GATTTAACACCATCAACGAC+AGG | - | tig0018625:8532-8551 | None:intergenic | 40.0% | |
| !! | GTCGTTGATGGTGTTAAATC+TGG | + | tig0018625:8532-8551 | Msa1368180:CDS | 40.0% |
| GAAGGAAACATGGATTCTGT+TGG | + | tig0018625:8565-8584 | Msa1368180:CDS | 40.0% | |
| GATTAACATGGTAGACTCCA+AGG | + | tig0018625:8864-8883 | Msa1368180:intron | 40.0% | |
| GATTAACATGGTAGACTCCA+AGG | + | tig0018625:8864-8883 | Msa1368180:intron | 40.0% | |
| CTATAGAAGAGGCAGAAGAA+AGG | + | tig0018625:9058-9077 | Msa1368180:intron | 40.0% | |
| AGAGGCAGAAGAAAGGAAAA+AGG | + | tig0018625:9065-9084 | Msa1368180:intron | 40.0% | |
| GAGGCAGAAGAAAGGAAAAA+GGG | + | tig0018625:9066-9085 | Msa1368180:intron | 40.0% | |
| AGGCAGAAGAAAGGAAAAAG+GGG | + | tig0018625:9067-9086 | Msa1368180:intron | 40.0% | |
| CCAAGGCTAAGAATGACATA+TGG | - | tig0018625:9375-9394 | None:intergenic | 40.0% | |
| CCATATGTCATTCTTAGCCT+TGG | + | tig0018625:9372-9391 | Msa1368180:CDS | 40.0% | |
| ! | ACTGTTCTTTTTGCTGCGTA+TGG | - | tig0018625:9406-9425 | None:intergenic | 40.0% |
| ATTCCAAATTGGCATTCCAG+GGG | - | tig0018625:9448-9467 | None:intergenic | 40.0% | |
| GATTCCAAATTGGCATTCCA+GGG | - | tig0018625:9449-9468 | None:intergenic | 40.0% | |
| TGATTCCAAATTGGCATTCC+AGG | - | tig0018625:9450-9469 | None:intergenic | 40.0% | |
| ! | TGGAATGCCAATTTGGAATC+AGG | + | tig0018625:9449-9468 | Msa1368180:CDS | 40.0% |
| TTCACATGTTCTAGCACTAC+AGG | + | tig0018625:9532-9551 | Msa1368180:intron | 40.0% | |
| !!! | TAACTTCTGCTTTTTCGGGT+TGG | - | tig0018625:9576-9595 | None:intergenic | 40.0% |
| GCAGATTTGACTATTGGTAC+TGG | + | tig0018625:9626-9645 | Msa1368180:CDS | 40.0% | |
| ! | TTTGACTATTGGTACTGGAG+AGG | + | tig0018625:9631-9650 | Msa1368180:CDS | 40.0% |
| CTTAGTGTCTTGTCTGTCTA+TGG | + | tig0018625:9805-9824 | Msa1368180:intron | 40.0% | |
| GCAATTAGCATGCAGCATTA+TGG | - | tig0018625:9832-9851 | None:intergenic | 40.0% | |
| GCACATCTTTGCTTAAGACA+AGG | - | tig0018625:9964-9983 | None:intergenic | 40.0% | |
| TAAGATCACCAATTCTGGTG+AGG | - | tig0018625:10066-10085 | None:intergenic | 40.0% | |
| !! | CTGAATGCTTTGGAGTGTAT+AGG | + | tig0018625:10182-10201 | Msa1368180:intron | 40.0% |
| TTCTTTCAGCGACTAAGCAA+AGG | - | tig0018625:10258-10277 | None:intergenic | 40.0% | |
| !! | AATATTTTCTGGCGTGTGCT+GGG | + | tig0018625:10312-10331 | Msa1368180:intron | 40.0% |
| !! | CATCCAACTTTTTCCCTACT+AGG | - | tig0018625:10378-10397 | None:intergenic | 40.0% |
| GGGAAAAAGTTGGATGTTCA+TGG | + | tig0018625:10382-10401 | Msa1368180:intron | 40.0% | |
| AAAGTTGGATGTTCATGGGA+AGG | + | tig0018625:10387-10406 | Msa1368180:intron | 40.0% | |
| AAGTTGGATGTTCATGGGAA+GGG | + | tig0018625:10388-10407 | Msa1368180:intron | 40.0% | |
| !! | AGAGAGTTTTGTGGTGATGT+TGG | + | tig0018625:10442-10461 | Msa1368180:intron | 40.0% |
| !! | AGTTTTGTGGTGATGTTGGT+GGG | + | tig0018625:10446-10465 | Msa1368180:intron | 40.0% |
| AGCTCAACTCCTTATAACAG+AGG | - | tig0018625:10551-10570 | None:intergenic | 40.0% | |
| ! | AATACCACACTTTTCGACCA+CGG | + | tig0018625:10721-10740 | Msa1368180:intron | 40.0% |
| CTACTTTGATGCAAGGGATT+GGG | - | tig0018625:10843-10862 | None:intergenic | 40.0% | |
| ACTACTTTGATGCAAGGGAT+TGG | - | tig0018625:10844-10863 | None:intergenic | 40.0% | |
| !!! | GGTTGGGGTTTTTTACGAAA+GGG | + | tig0018625:11056-11075 | Msa1368180:CDS | 40.0% |
| TAAAGCATATGTGGAGGATG+AGG | + | tig0018625:11112-11131 | Msa1368180:CDS | 40.0% | |
| AGCAAATGTCACTGATACGA+TGG | + | tig0018625:11205-11224 | Msa1368180:CDS | 40.0% | |
| GCAAATGTCACTGATACGAT+GGG | + | tig0018625:11206-11225 | Msa1368180:CDS | 40.0% | |
| TTTCAGATGCTACTATCCCT+TGG | - | tig0018625:11310-11329 | None:intergenic | 40.0% | |
| ! | GGATAGTAGCATCTGAAACA+GGG | + | tig0018625:11312-11331 | Msa1368180:CDS | 40.0% |
| ! | TCTGAAACAGGGTTTACCAA+AGG | + | tig0018625:11323-11342 | Msa1368180:CDS | 40.0% |
| AACAGGGTTTACCAAAGGTT+TGG | + | tig0018625:11328-11347 | Msa1368180:CDS | 40.0% | |
| TGAGCCATTATCCAAACCTT+TGG | - | tig0018625:11342-11361 | None:intergenic | 40.0% | |
| AAAATCTCCTGTTGCCAATG+CGG | + | tig0018625:11382-11401 | Msa1368180:CDS | 40.0% | |
| TCAGAATTATCAGCACTAGG+AGG | - | tig0018625:11416-11435 | None:intergenic | 40.0% | |
| CCTTCAGAATTATCAGCACT+AGG | - | tig0018625:11419-11438 | None:intergenic | 40.0% | |
| !! | CCTAGTGCTGATAATTCTGA+AGG | + | tig0018625:11416-11435 | Msa1368180:CDS | 40.0% |
| ! | AATTCTGAAGGTTCTTCTGG+AGG | + | tig0018625:11428-11447 | Msa1368180:CDS | 40.0% |
| GTTAAACTTCAATGCAGGGT+CGG | + | tig0018625:11550-11569 | Msa1368180:intron | 40.0% | |
| ATCGGCGAGCAAAAAAAAAG+TGG | + | tig0018625:12073-12092 | Msa1368180:intron | 40.0% | |
| ! | TATATGCATGAGTACTGCTG+TGG | + | tig0018625:12480-12499 | Msa1368180:three_prime_UTR | 40.0% |
| AAGTGGGAAGAGGAATGGAA+TGG | - | tig0018625:5739-5758 | None:intergenic | 45.0% | |
| TGCTTGGGAATGTTGGAAGT+GGG | - | tig0018625:5755-5774 | None:intergenic | 45.0% | |
| ATGCTTGGGAATGTTGGAAG+TGG | - | tig0018625:5756-5775 | None:intergenic | 45.0% | |
| !!! | CATGGTTTTGGAAAGGGGAA+AGG | - | tig0018625:6005-6024 | None:intergenic | 45.0% |
| ACGTGAATTGAGGGATTCAC+AGG | + | tig0018625:6228-6247 | Msa1368180:CDS | 45.0% | |
| GAGGGATTCACAGGTTCAAT+TGG | + | tig0018625:6237-6256 | Msa1368180:CDS | 45.0% | |
| TTAATAGGCGGCGATGGAAT+CGG | - | tig0018625:6334-6353 | None:intergenic | 45.0% | |
| GCAACGTTTCGGTTAATAGG+CGG | - | tig0018625:6346-6365 | None:intergenic | 45.0% | |
| CCAGCAACGTTTCGGTTAAT+AGG | - | tig0018625:6349-6368 | None:intergenic | 45.0% | |
| CCTATTAACCGAAACGTTGC+TGG | + | tig0018625:6346-6365 | Msa1368180:CDS | 45.0% | |
| GGATTTGCAGAGGAAAGAGT+CGG | + | tig0018625:6513-6532 | Msa1368180:CDS | 45.0% | |
| AGAGGAAAGAGTCGGTTGAA+TGG | + | tig0018625:6521-6540 | Msa1368180:CDS | 45.0% | |
| GAGGAAAGAGTCGGTTGAAT+GGG | + | tig0018625:6522-6541 | Msa1368180:CDS | 45.0% | |
| GTCGGTTGAATGGGTGAATA+TGG | + | tig0018625:6531-6550 | Msa1368180:CDS | 45.0% | |
| GGGATGAACCTTTGTCTGTT+AGG | + | tig0018625:6686-6705 | Msa1368180:CDS | 45.0% | |
| !!! | TTTTTTGTGGCACGAGGCAA+GGG | + | tig0018625:7047-7066 | Msa1368180:intron | 45.0% |
| CTAGATACCAGATAGGCCTT+AGG | + | tig0018625:7368-7387 | Msa1368180:intron | 45.0% | |
| CAGTATACCTAAGGCCTATC+TGG | - | tig0018625:7378-7397 | None:intergenic | 45.0% | |
| CAGATAGGCCTTAGGTATAC+TGG | + | tig0018625:7376-7395 | Msa1368180:CDS | 45.0% | |
| ATAGGCCTTAGGTATACTGG+AGG | + | tig0018625:7379-7398 | Msa1368180:CDS | 45.0% | |
| TTCGAGAAGGGAAAAGCTGT+TGG | + | tig0018625:8490-8509 | Msa1368180:CDS | 45.0% | |
| CATCTGAAGACTGACTACCT+TGG | - | tig0018625:8884-8903 | None:intergenic | 45.0% | |
| CATCTGAAGACTGACTACCT+TGG | - | tig0018625:8884-8903 | None:intergenic | 45.0% | |
| ACATATGGATCTGTCTTGCC+TGG | - | tig0018625:9360-9379 | None:intergenic | 45.0% | |
| TGCGTATGGTTTGATCTCCA+AGG | - | tig0018625:9392-9411 | None:intergenic | 45.0% | |
| !! | TCGGGTTGGAAACAAGCATA+TGG | - | tig0018625:9562-9581 | None:intergenic | 45.0% |
| TATCCAAGTTAAGGACGCTC+TGG | + | tig0018625:9598-9617 | Msa1368180:CDS | 45.0% | |
| ATCCAAGTTAAGGACGCTCT+GGG | + | tig0018625:9599-9618 | Msa1368180:CDS | 45.0% | |
| AATCAGCAACAGAGGAGGAA+GGG | - | tig0018625:9999-10018 | None:intergenic | 45.0% | |
| TAATCAGCAACAGAGGAGGA+AGG | - | tig0018625:10000-10019 | None:intergenic | 45.0% | |
| ACACAGCTAATCAGCAACAG+AGG | - | tig0018625:10007-10026 | None:intergenic | 45.0% | |
| CAATTCTGGTGAGGCTCATT+CGG | - | tig0018625:10057-10076 | None:intergenic | 45.0% | |
| TGCCACTACACTGAATGCTT+TGG | + | tig0018625:10172-10191 | Msa1368180:intron | 45.0% | |
| ! | CTCCAAAGCATTCAGTGTAG+TGG | - | tig0018625:10177-10196 | None:intergenic | 45.0% |
| ! | GAGTGTATAGGGCATGGTTT+TGG | + | tig0018625:10194-10213 | Msa1368180:intron | 45.0% |
| CTTAGTCGCTGAAAGAACTG+TGG | + | tig0018625:10261-10280 | Msa1368180:intron | 45.0% | |
| !! | GAATATTTTCTGGCGTGTGC+TGG | + | tig0018625:10311-10330 | Msa1368180:intron | 45.0% |
| TGTAATGAAGGGGTCCTAGT+AGG | + | tig0018625:10361-10380 | Msa1368180:intron | 45.0% | |
| GTAATGAAGGGGTCCTAGTA+GGG | + | tig0018625:10362-10381 | Msa1368180:intron | 45.0% | |
| GGTCCTAGTAGGGAAAAAGT+TGG | + | tig0018625:10372-10391 | Msa1368180:intron | 45.0% | |
| !! | GAGTTTTGTGGTGATGTTGG+TGG | + | tig0018625:10445-10464 | Msa1368180:intron | 45.0% |
| !! | TTGTTGCTTTACAAGGGGGT+TGG | + | tig0018625:11039-11058 | Msa1368180:CDS | 45.0% |
| !! | TGTTGCTTTACAAGGGGGTT+GGG | + | tig0018625:11040-11059 | Msa1368180:CDS | 45.0% |
| !!! | GGGTTGGGGTTTTTTACGAA+AGG | + | tig0018625:11055-11074 | Msa1368180:CDS | 45.0% |
| ! | TTTTTACGAAAGGGCTCGTC+TGG | + | tig0018625:11065-11084 | Msa1368180:CDS | 45.0% |
| ! | TTTTACGAAAGGGCTCGTCT+GGG | + | tig0018625:11066-11085 | Msa1368180:CDS | 45.0% |
| TGAGGAAGATGACAAGACTG+AGG | + | tig0018625:11130-11149 | Msa1368180:CDS | 45.0% | |
| ! | GGGATAGTAGCATCTGAAAC+AGG | + | tig0018625:11311-11330 | Msa1368180:CDS | 45.0% |
| ! | ATTGATTCCGCATTGGCAAC+AGG | - | tig0018625:11392-11411 | None:intergenic | 45.0% |
| ! | AGGAGGAATTGATTCCGCAT+TGG | - | tig0018625:11399-11418 | None:intergenic | 45.0% |
| GCTGCATGCAATCTTCATCT+TGG | + | tig0018625:11667-11686 | Msa1368180:three_prime_UTR | 45.0% | |
| CAAGATGGACAAGCACAACA+AGG | - | tig0018625:11911-11930 | None:intergenic | 45.0% | |
| CATGGAGAGAAGCTTCAAGA+TGG | - | tig0018625:11926-11945 | None:intergenic | 45.0% | |
| CTCCATGCGTGGATAACTAA+TGG | + | tig0018625:11939-11958 | Msa1368180:intron | 45.0% | |
| CTCCATTAGTTATCCACGCA+TGG | - | tig0018625:11944-11963 | None:intergenic | 45.0% | |
| !!! | TTTTTTGCTCGCCGATTTGG+TGG | - | tig0018625:12069-12088 | None:intergenic | 45.0% |
| TTAAACAATCCCAAGGGTGG+TGG | + | tig0018625:12156-12175 | Msa1368180:intron | 45.0% | |
| TGATATGTTCCACCACCCTT+GGG | - | tig0018625:12168-12187 | None:intergenic | 45.0% | |
| ATGATATGTTCCACCACCCT+TGG | - | tig0018625:12169-12188 | None:intergenic | 45.0% | |
| !! | TGGAGGAAAGCATCTACTAG+CGG | + | tig0018625:12500-12519 | Msa1368180:three_prime_UTR | 45.0% |
| !!! | TTTTTTATTTTTTATTTTAG+TGG | + | tig0018625:7704-7723 | Msa1368180:intron | 5.0% |
| !!! | TTTTTTTTTTTTTTTTTGAT+AGG | + | tig0018625:7889-7908 | Msa1368180:intron | 5.0% |
| GTTGGAAGTGGGAAGAGGAA+TGG | - | tig0018625:5744-5763 | None:intergenic | 50.0% | |
| GGAATGTTGGAAGTGGGAAG+AGG | - | tig0018625:5749-5768 | None:intergenic | 50.0% | |
| AAGGCGGTGAACGTGAATTG+AGG | + | tig0018625:6218-6237 | Msa1368180:CDS | 50.0% | |
| AGGCGGTGAACGTGAATTGA+GGG | + | tig0018625:6219-6238 | Msa1368180:CDS | 50.0% | |
| TAATAGGCGGCGATGGAATC+GGG | - | tig0018625:6333-6352 | None:intergenic | 50.0% | |
| TTTCGGTTAATAGGCGGCGA+TGG | - | tig0018625:6340-6359 | None:intergenic | 50.0% | |
| ! | AGGATAGTTTTCGCGGTGTG+TGG | + | tig0018625:6452-6471 | Msa1368180:CDS | 50.0% |
| GGTGTTAGGGAAGTTGTGGA+AGG | + | tig0018625:6552-6571 | Msa1368180:CDS | 50.0% | |
| !!! | CTCCACTTTTTTGTGGCACG+AGG | + | tig0018625:7041-7060 | Msa1368180:intron | 50.0% |
| TGCCTCGTGCCACAAAAAAG+TGG | - | tig0018625:7046-7065 | None:intergenic | 50.0% | |
| !!! | CTTTTTTGTGGCACGAGGCA+AGG | + | tig0018625:7046-7065 | Msa1368180:intron | 50.0% |
| CAAGGGAATAGACTCGCTGT+TGG | + | tig0018625:7064-7083 | Msa1368180:intron | 50.0% | |
| ! | GACTCGCTGTTGGTGTGTTT+TGG | + | tig0018625:7074-7093 | Msa1368180:intron | 50.0% |
| !! | TCGCTGTTGGTGTGTTTTGG+TGG | + | tig0018625:7077-7096 | Msa1368180:intron | 50.0% |
| !!! | CGCTGTTGGTGTGTTTTGGT+GGG | + | tig0018625:7078-7097 | Msa1368180:intron | 50.0% |
| ACACAATAGCCTCAGACCTC+AGG | - | tig0018625:7290-7309 | None:intergenic | 50.0% | |
| GAGCACCTCCAGTATACCTA+AGG | - | tig0018625:7387-7406 | None:intergenic | 50.0% | |
| ATACCAACAGCTCCTTGGGT+CGG | + | tig0018625:7514-7533 | Msa1368180:CDS | 50.0% | |
| !! | TAGTGGAGTGGTGGTGGAAA+TGG | + | tig0018625:7721-7740 | Msa1368180:intron | 50.0% |
| AACGACAGGACCAACAGTGA+CGG | - | tig0018625:8518-8537 | None:intergenic | 50.0% | |
| ACTGTTGGTCCTGTCGTTGA+TGG | + | tig0018625:8520-8539 | Msa1368180:CDS | 50.0% | |
| TGAACTCTCCGTGACTCTTG+TGG | + | tig0018625:8588-8607 | Msa1368180:CDS | 50.0% | |
| TCGAGCATCCACAAGAGTCA+CGG | - | tig0018625:8599-8618 | None:intergenic | 50.0% | |
| ! | ATCCCAGAGCGTCCTTAACT+TGG | - | tig0018625:9604-9623 | None:intergenic | 50.0% |
| CAGCTAATCAGCAACAGAGG+AGG | - | tig0018625:10004-10023 | None:intergenic | 50.0% | |
| CGAATGAGCCTCACCAGAAT+TGG | + | tig0018625:10055-10074 | Msa1368180:intron | 50.0% | |
| !! | GCTTTGGAGTGTATAGGGCA+TGG | + | tig0018625:10188-10207 | Msa1368180:intron | 50.0% |
| ! | ATGTTCATGGGAAGGGTGCA+GGG | + | tig0018625:10395-10414 | Msa1368180:intron | 50.0% |
| GGTTTCGGTAAGGGAAGAGA+GGG | + | tig0018625:10417-10436 | Msa1368180:intron | 50.0% | |
| GTTTCGGTAAGGGAAGAGAG+GGG | + | tig0018625:10418-10437 | Msa1368180:intron | 50.0% | |
| ! | GAGAGGGGAAGAGAGTTTTG+TGG | + | tig0018625:10433-10452 | Msa1368180:intron | 50.0% |
| ! | GTTGCTTTACAAGGGGGTTG+GGG | + | tig0018625:11041-11060 | Msa1368180:CDS | 50.0% |
| TTTACGAAAGGGCTCGTCTG+GGG | + | tig0018625:11067-11086 | Msa1368180:CDS | 50.0% | |
| CGTCTGGGGAGATATTGCTT+AGG | + | tig0018625:11081-11100 | Msa1368180:CDS | 50.0% | |
| GGAAGATGACAAGACTGAGG+AGG | + | tig0018625:11133-11152 | Msa1368180:CDS | 50.0% | |
| CGTAAGAGATTCTGCGTACC+CGG | + | tig0018625:11229-11248 | Msa1368180:CDS | 50.0% | |
| !!! | ATGCAGGGTCGGCCTTATTT+TGG | + | tig0018625:11561-11580 | Msa1368180:intron | 50.0% |
| TGCAGCAGAACACCATCTCA+AGG | - | tig0018625:11653-11672 | None:intergenic | 50.0% | |
| TTGAAGCTTCTCTCCATGCG+TGG | + | tig0018625:11928-11947 | Msa1368180:intron | 50.0% | |
| TATCCTGACAGGTTGTGCAG+TGG | + | tig0018625:12405-12424 | Msa1368180:intron | 50.0% | |
| ATCCTGACAGGTTGTGCAGT+GGG | + | tig0018625:12406-12425 | Msa1368180:intron | 50.0% | |
| ! | ATGCATGAGTACTGCTGTGG+AGG | + | tig0018625:12483-12502 | Msa1368180:three_prime_UTR | 50.0% |
| TTGGGTCGGAGCTGCTTCAT+GGG | + | tig0018625:7528-7547 | Msa1368180:CDS | 55.0% | |
| ACGACAGGACCAACAGTGAC+GGG | - | tig0018625:8517-8536 | None:intergenic | 55.0% | |
| ! | GATGTTCATGGGAAGGGTGC+AGG | + | tig0018625:10394-10413 | Msa1368180:intron | 55.0% |
| ! | TGTTCATGGGAAGGGTGCAG+GGG | + | tig0018625:10396-10415 | Msa1368180:intron | 55.0% |
| GGGTTTCGGTAAGGGAAGAG+AGG | + | tig0018625:10416-10435 | Msa1368180:intron | 55.0% | |
| ! | TGGTGATGTTGGTGGGCCAT+TGG | + | tig0018625:10453-10472 | Msa1368180:intron | 55.0% |
| ! | ATGTTGGTGGGCCATTGGCT+TGG | + | tig0018625:10458-10477 | Msa1368180:intron | 55.0% |
| !! | TGTTGGTGGGCCATTGGCTT+GGG | + | tig0018625:10459-10478 | Msa1368180:intron | 55.0% |
| ! | ACCACACTTTTCGACCACGG+TGG | + | tig0018625:10724-10743 | Msa1368180:intron | 55.0% |
| !! | GCTCGCCGATTTGGTGGATA+TGG | - | tig0018625:12063-12082 | None:intergenic | 55.0% |
| AACCCACTGCACAACCTGTC+AGG | - | tig0018625:12411-12430 | None:intergenic | 55.0% | |
| TACTAGCGGCGCGTGATTCT+TGG | + | tig0018625:12514-12533 | Msa1368180:three_prime_UTR | 55.0% | |
| CATGAAGCAGCTCCGACCCA+AGG | - | tig0018625:7529-7548 | None:intergenic | 60.0% | |
| CTTGGGTCGGAGCTGCTTCA+TGG | + | tig0018625:7527-7546 | Msa1368180:CDS | 60.0% | |
| GCTGTTGGTCCCGTCACTGT+TGG | + | tig0018625:8505-8524 | Msa1368180:CDS | 60.0% | |
| ACTACTGTCATTGGCGCCCC+TGG | + | tig0018625:9429-9448 | Msa1368180:CDS | 60.0% | |
| GCGCCCCTGGAATGCCAATT+TGG | + | tig0018625:9442-9461 | Msa1368180:CDS | 60.0% | |
| CTGGCGTGTGCTGGGAACAA+TGG | + | tig0018625:10320-10339 | Msa1368180:intron | 60.0% | |
| ! | TGGGAAGGGTGCAGGGGTTT+CGG | + | tig0018625:10402-10421 | Msa1368180:intron | 60.0% |
| AGGGTGCAGGGGTTTCGGTA+AGG | + | tig0018625:10407-10426 | Msa1368180:intron | 60.0% | |
| GGGTGCAGGGGTTTCGGTAA+GGG | + | tig0018625:10408-10427 | Msa1368180:intron | 60.0% | |
| GCAATCTCCGCCCAAGCCAA+TGG | - | tig0018625:10472-10491 | None:intergenic | 60.0% | |
| GCCACCGTGGTCGAAAAGTG+TGG | - | tig0018625:10728-10747 | None:intergenic | 60.0% | |
| ! | GTTTTGCAATGGGGCCACCG+TGG | - | tig0018625:10741-10760 | None:intergenic | 60.0% |
| GCTCCGACCCAAGGAGCTGT+TGG | - | tig0018625:7520-7539 | None:intergenic | 65.0% | |
| !! | TGGTGGGCCATTGGCTTGGG+CGG | + | tig0018625:10462-10481 | Msa1368180:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0018625 | gene | 5660 | 12810 | 5660 | ID=Msa1368180;Name=Msa1368180 |
| tig0018625 | mRNA | 5660 | 12810 | 5660 | ID=Msa1368180-mRNA-1;Parent=Msa1368180;Name=Msa1368180-mRNA-1;_AED=0.06;_eAED=0.06;_QI=260|1|1|1|0.87|0.77|9|439|686 |
| tig0018625 | exon | 5660 | 6749 | 5660 | ID=Msa1368180-mRNA-1:exon:353;Parent=Msa1368180-mRNA-1 |
| tig0018625 | exon | 7372 | 7613 | 7372 | ID=Msa1368180-mRNA-1:exon:354;Parent=Msa1368180-mRNA-1 |
| tig0018625 | exon | 8037 | 8055 | 8037 | ID=Msa1368180-mRNA-1:exon:355;Parent=Msa1368180-mRNA-1 |
| tig0018625 | exon | 8420 | 8637 | 8420 | ID=Msa1368180-mRNA-1:exon:356;Parent=Msa1368180-mRNA-1 |
| tig0018625 | exon | 9361 | 9470 | 9361 | ID=Msa1368180-mRNA-1:exon:357;Parent=Msa1368180-mRNA-1 |
| tig0018625 | exon | 9554 | 9652 | 9554 | ID=Msa1368180-mRNA-1:exon:358;Parent=Msa1368180-mRNA-1 |
| tig0018625 | exon | 10996 | 11449 | 10996 | ID=Msa1368180-mRNA-1:exon:359;Parent=Msa1368180-mRNA-1 |
| tig0018625 | exon | 11567 | 11699 | 11567 | ID=Msa1368180-mRNA-1:exon:360;Parent=Msa1368180-mRNA-1 |
| tig0018625 | exon | 12416 | 12810 | 12416 | ID=Msa1368180-mRNA-1:exon:361;Parent=Msa1368180-mRNA-1 |
| tig0018625 | five_prime_UTR | 5660 | 5919 | 5660 | ID=Msa1368180-mRNA-1:five_prime_utr;Parent=Msa1368180-mRNA-1 |
| tig0018625 | CDS | 5920 | 6749 | 5920 | ID=Msa1368180-mRNA-1:cds;Parent=Msa1368180-mRNA-1 |
| tig0018625 | CDS | 7372 | 7613 | 7372 | ID=Msa1368180-mRNA-1:cds;Parent=Msa1368180-mRNA-1 |
| tig0018625 | CDS | 8037 | 8055 | 8037 | ID=Msa1368180-mRNA-1:cds;Parent=Msa1368180-mRNA-1 |
| tig0018625 | CDS | 8420 | 8637 | 8420 | ID=Msa1368180-mRNA-1:cds;Parent=Msa1368180-mRNA-1 |
| tig0018625 | CDS | 9361 | 9470 | 9361 | ID=Msa1368180-mRNA-1:cds;Parent=Msa1368180-mRNA-1 |
| tig0018625 | CDS | 9554 | 9652 | 9554 | ID=Msa1368180-mRNA-1:cds;Parent=Msa1368180-mRNA-1 |
| tig0018625 | CDS | 10996 | 11449 | 10996 | ID=Msa1368180-mRNA-1:cds;Parent=Msa1368180-mRNA-1 |
| tig0018625 | CDS | 11567 | 11655 | 11567 | ID=Msa1368180-mRNA-1:cds;Parent=Msa1368180-mRNA-1 |
| tig0018625 | three_prime_UTR | 11656 | 11699 | 11656 | ID=Msa1368180-mRNA-1:three_prime_utr;Parent=Msa1368180-mRNA-1 |
| tig0018625 | three_prime_UTR | 12416 | 12810 | 12416 | ID=Msa1368180-mRNA-1:three_prime_utr;Parent=Msa1368180-mRNA-1 |
| Gene Sequence |
| Protein sequence |
