AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0903600

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0903600 MtrunA17_Chr6g0452001 95.326 1198 47 2 59 1248 149 1345 0.0 2236
Msa0903600 MtrunA17_Chr6g0452001 76.800 125 17 2 1 113 1 125 6.58e-34 142
Msa0903600 MtrunA17_Chr5g0415031 48.064 1317 567 35 53 1284 123 1407 0.0 1071
Msa0903600 MtrunA17_Chr5g0415031 51.639 122 33 4 1 113 1 105 5.05e-23 107
Msa0903600 MtrunA17_Chr8g0364231 46.873 1327 554 33 59 1284 128 1404 0.0 1055
Msa0903600 MtrunA17_Chr8g0364231 47.183 142 48 4 1 132 1 125 5.22e-23 107
Msa0903600 MtrunA17_Chr8g0368731 44.426 619 277 17 567 1149 26 613 8.64e-136 429
Msa0903600 MtrunA17_Chr6g0452021 54.802 354 95 8 49 387 117 420 2.05e-107 347
Msa0903600 MtrunA17_Chr8g0362641 46.067 89 48 0 236 324 104 192 1.09e-16 82.0
Msa0903600 MtrunA17_Chr8g0362641 40.625 96 57 0 241 336 190 285 4.47e-16 80.5
Msa0903600 MtrunA17_Chr1g0206781 47.887 71 29 1 51 113 3 73 5.89e-11 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0903600 AT5G15020.2 53.479 1279 504 26 49 1286 126 1354 0.0 1231
Msa0903600 AT5G15020.2 55.319 141 41 4 1 126 1 134 3.33e-29 127
Msa0903600 AT5G15020.1 52.982 1291 504 27 49 1286 126 1366 0.0 1221
Msa0903600 AT5G15020.1 55.319 141 41 4 1 126 1 134 3.56e-29 127
Msa0903600 AT3G01320.1 52.636 1271 516 32 60 1285 143 1372 0.0 1174
Msa0903600 AT3G01320.1 59.504 121 39 3 1 113 1 119 1.13e-28 125
Msa0903600 AT3G01320.2 52.407 1267 513 31 60 1285 143 1360 0.0 1164
Msa0903600 AT3G01320.2 59.504 121 39 3 1 113 1 119 1.12e-28 125
Msa0903600 AT1G24190.2 45.027 1277 578 39 47 1259 88 1304 0.0 941
Msa0903600 AT1G24190.2 58.442 77 21 2 45 113 3 76 1.26e-15 83.2
Msa0903600 AT1G70060.2 44.170 1295 583 35 59 1284 101 1324 0.0 941
Msa0903600 AT1G70060.2 56.757 74 24 1 48 113 3 76 1.96e-15 82.4
Msa0903600 AT1G70060.1 44.170 1295 583 35 59 1284 101 1324 0.0 941
Msa0903600 AT1G70060.1 56.757 74 24 1 48 113 3 76 1.96e-15 82.4
Msa0903600 AT1G24190.3 45.027 1277 578 39 47 1259 88 1304 0.0 941
Msa0903600 AT1G24190.3 58.442 77 21 2 45 113 3 76 1.25e-15 83.2
Msa0903600 AT1G24190.1 44.809 1281 579 40 47 1259 88 1308 0.0 934
Msa0903600 AT1G24190.1 58.442 77 21 2 45 113 3 76 1.29e-15 83.2
Msa0903600 AT1G59890.2 44.123 587 239 12 236 736 117 700 1.94e-134 442
Msa0903600 AT1G59890.2 45.648 471 203 12 845 1284 717 1165 6.57e-106 363
Msa0903600 AT1G59890.2 45.455 121 44 3 1 113 1 107 9.22e-14 77.0
Msa0903600 AT1G59890.4 43.739 583 242 10 236 736 117 695 6.30e-134 440
Msa0903600 AT1G59890.4 47.126 435 188 10 845 1259 712 1124 3.51e-104 358
Msa0903600 AT1G59890.4 45.455 121 44 3 1 113 1 107 8.43e-14 77.0
Msa0903600 AT1G59890.1 43.739 583 242 10 236 736 117 695 1.05e-133 439
Msa0903600 AT1G59890.1 45.648 471 203 12 845 1284 712 1160 6.91e-106 363
Msa0903600 AT1G59890.1 45.455 121 44 3 1 113 1 107 8.75e-14 77.0
Msa0903600 AT1G59890.3 43.396 583 240 11 236 736 117 691 3.70e-130 430
Msa0903600 AT1G59890.3 45.648 471 203 12 845 1284 708 1156 5.49e-106 363
Msa0903600 AT1G59890.3 45.455 121 44 3 1 113 1 107 8.30e-14 77.0
Msa0903600 AT1G10450.2 47.033 455 219 8 341 776 264 715 2.67e-121 405
Msa0903600 AT1G10450.2 44.266 436 222 8 845 1275 689 1108 1.24e-97 338
Msa0903600 AT1G10450.2 39.669 121 39 3 1 113 1 95 5.81e-13 74.3
Msa0903600 AT1G10450.1 47.033 455 219 8 341 776 264 715 2.67e-121 405
Msa0903600 AT1G10450.1 44.266 436 222 8 845 1275 689 1108 1.24e-97 338
Msa0903600 AT1G10450.1 39.669 121 39 3 1 113 1 95 5.81e-13 74.3
Msa0903600 AT1G10450.3 47.033 455 219 8 341 776 315 766 1.63e-120 404
Msa0903600 AT1G10450.3 44.266 436 222 8 845 1275 740 1159 3.07e-97 338
Msa0903600 AT1G10450.3 39.669 121 39 3 1 113 52 146 7.43e-13 73.9
Msa0903600 AT1G10250.1 70.000 70 20 1 1052 1120 1 70 9.81e-24 96.7
Msa0903600 AT5G15025.1 43.802 121 48 2 1 113 1 109 4.16e-21 90.5

Find 284 sgRNAs with CRISPR-Local

Find 554 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAAGAATGATTTACAAAATT+TGG 0.100558 6_2:-815160 Msa0903600:intron
AATCTCCATGCGACTTAAAA+AGG 0.189205 6_2:+816470 None:intergenic
CTCAGAAACAAACCGAAATA+TGG 0.194221 6_2:-810133 Msa0903600:intron
ACTTCATTCTTGTCAGATTT+TGG 0.196682 6_2:+812548 None:intergenic
TAGTAGAGATGATCATTTAA+TGG 0.245705 6_2:-812435 Msa0903600:CDS
GTTCAGATTTCAATAAAGTT+TGG 0.277896 6_2:-813154 Msa0903600:CDS
GAAGATGTCAAAGTAGTTAA+TGG 0.280275 6_2:-810073 Msa0903600:CDS
CTTGAATTGGACTCTCTGTT+AGG 0.291590 6_2:+812575 None:intergenic
GGAGTTAACGGAGGAGGAGG+TGG 0.295858 6_2:-817230 Msa0903600:CDS
ATCTTCAAACTTGGCATTCT+CGG 0.300196 6_2:+810899 None:intergenic
CCTCAATGAGCGGGGTTCTA+TGG 0.314080 6_2:-816359 Msa0903600:CDS
TCACCATGAATTTACAGTTT+AGG 0.315500 6_2:+809182 None:intergenic
GTCTGTCCTCCCTGGCAAAA+AGG 0.316087 6_2:-810335 Msa0903600:CDS
TTTATGCAGTTCTAAATCTA+AGG 0.316087 6_2:-813304 Msa0903600:intron
GAGGCTCTGGAGTACCTTCT+TGG 0.321223 6_2:-812711 Msa0903600:CDS
GATCATTTAATGGATAATAA+AGG 0.322545 6_2:-812425 Msa0903600:CDS
GGAAGTGAAAGACATGTTTC+AGG 0.324751 6_2:-817153 Msa0903600:CDS
TGCAGTCGTCTAGTCCTTCT+CGG 0.325669 6_2:-810456 Msa0903600:intron
TTAGAGCGTTGTGAAAATAT+TGG 0.331915 6_2:-814379 Msa0903600:intron
GTCTTTCACTTCCTTCAAAT+AGG 0.332619 6_2:+817163 None:intergenic
TCTGCATCTGTCACAATTAG+AGG 0.333684 6_2:-812323 Msa0903600:CDS
TTCAATCGAGTCAATATTAC+AGG 0.334568 6_2:+813206 None:intergenic
GATGAATGTCGAGCAATTCT+TGG 0.338703 6_2:-810879 Msa0903600:CDS
AACCACATAACCTTCTTAGA+AGG 0.341299 6_2:+808874 None:intergenic
TCATCTAAGTCCCCATATTT+CGG 0.343556 6_2:+810121 None:intergenic
TTCAGATTTCAATAAAGTTT+GGG 0.344404 6_2:-813153 Msa0903600:CDS
CCCGGAGGTGGTGGTGGCGG+AGG 0.347061 6_2:-817254 Msa0903600:CDS
AATTAAAAGTTCTTATTGTA+AGG 0.350521 6_2:-808836 Msa0903600:three_prime_UTR
GGAGGTGGTGGTGGCGGAGG+TGG 0.354735 6_2:-817251 Msa0903600:CDS
ACCTCCGCCACCACCACCTC+CGG 0.358286 6_2:+817253 None:intergenic
CTTCCTCCTCATGATCTTCC+CGG 0.362474 6_2:+811503 None:intergenic
ATGATTTCTTTGTTCTCTTT+AGG 0.364298 6_2:-811273 Msa0903600:CDS
CCACCTAAACTGTAAATTCA+TGG 0.366473 6_2:-809185 Msa0903600:exon
AGGAAATACGAGTCTAGAAA+TGG 0.366851 6_2:-811652 Msa0903600:CDS
CAAATAGGATAAAGCATCAT+TGG 0.368007 6_2:+817178 None:intergenic
AGATCATGAGGAGGAAGATA+TGG 0.369226 6_2:-811497 Msa0903600:CDS
ACGCCATTGGCCACTGGTAC+TGG 0.371625 6_2:+811835 None:intergenic
CGCTGACTAGCAGTAGGAAT+TGG 0.371739 6_2:+813813 None:intergenic
GAGAGAAAGAGAGAGAGTTT+TGG 0.374473 6_2:+818357 None:intergenic
TTTGCAGACGGGTTCCTTGC+TGG 0.381199 6_2:-814272 Msa0903600:intron
GGCCCCGGAGGTGGTGGTGG+CGG 0.384587 6_2:-817257 Msa0903600:CDS
AGGTGCATTGAACGCCTATA+TGG 0.395051 6_2:-813284 Msa0903600:CDS
TAAGGCACTTCAAGAATGTT+TGG 0.396241 6_2:+815208 None:intergenic
AGTTAACGGAGGAGGAGGTG+GGG 0.396605 6_2:-817228 Msa0903600:CDS
CCTCCTCAGAGTCAGCATTC+GGG 0.401332 6_2:+811731 None:intergenic
AGCAGAGGAAGCGTGAGAGC+AGG 0.401466 6_2:-816123 Msa0903600:CDS
CAAGGCCCCGGAGGTGGTGG+TGG 0.408020 6_2:-817260 Msa0903600:CDS
CACTGGGTATCTGTGACTTC+CGG 0.410808 6_2:-813759 Msa0903600:CDS
CAACAAGCGCTGAAATGAAA+TGG 0.414086 6_2:-811118 Msa0903600:CDS
TCCTCCTCAGAGTCAGCATT+CGG 0.414742 6_2:+811730 None:intergenic
CATCAAGTACATCAGCTTCT+CGG 0.416660 6_2:-809254 Msa0903600:CDS
TCAGAAACAAACCGAAATAT+GGG 0.416743 6_2:-810132 Msa0903600:intron
AGAAACAAGAGGAGTGGAAT+AGG 0.416915 6_2:-813181 Msa0903600:CDS
GGTCAAGGCCCCGGAGGTGG+TGG 0.417779 6_2:-817263 Msa0903600:CDS
TTGAATTGGACTCTCTGTTA+GGG 0.418625 6_2:+812576 None:intergenic
TCAATAAAATTATGAGGCTC+TGG 0.422837 6_2:-812724 Msa0903600:CDS
CAAACCACAATGACGATAGA+AGG 0.422917 6_2:-811672 Msa0903600:CDS
GACGAGCACCGTCCAGAGGC+TGG 0.424663 6_2:-811625 Msa0903600:CDS
AGCGTGAGAGCAGGGATAGA+AGG 0.425696 6_2:-816114 Msa0903600:CDS
GACAAAGAAAACGGTTCTCT+TGG 0.426941 6_2:-812470 Msa0903600:CDS
TACTTGCATTTGCCGCATCC+CGG 0.427003 6_2:+816333 None:intergenic
TTGGCCACTGGTACTGGAGG+TGG 0.427920 6_2:+811841 None:intergenic
AGAATTATCTGGTAAGAATC+TGG 0.428698 6_2:+816432 None:intergenic
TCCACACAGCATGCTCCATT+TGG 0.429499 6_2:-816400 Msa0903600:CDS
TATTGAATAACTCTTTACTT+TGG 0.429894 6_2:+812741 None:intergenic
TTCTGCAATTTGTGCTGTAA+TGG 0.430468 6_2:-810095 Msa0903600:CDS
TGATGCTTTATCCTATTTGA+AGG 0.431866 6_2:-817174 Msa0903600:CDS
CATTCATATTGTCCATGAGC+TGG 0.432194 6_2:+810425 None:intergenic
GAGAACTGTTTAACAAATCC+AGG 0.434098 6_2:+812371 None:intergenic
CTCTGCTTCACCTTCACTCT+CGG 0.434724 6_2:+811450 None:intergenic
GGTGGCGGAGGTGGAGTTAA+CGG 0.438397 6_2:-817242 Msa0903600:CDS
ATCATTTAATGGATAATAAA+GGG 0.439339 6_2:-812424 Msa0903600:CDS
TCGACATTCATCTTCAAACT+TGG 0.440486 6_2:+810890 None:intergenic
TATGAAAAGTCTCGGAAACC+TGG 0.442004 6_2:-810658 Msa0903600:CDS
CAGTTTCTGCGATAAAGTTA+AGG 0.442484 6_2:-815256 Msa0903600:CDS
GTTCTATGGCACCCGGGATG+CGG 0.444112 6_2:-816345 Msa0903600:CDS
GAGTTAACGGAGGAGGAGGT+GGG 0.447308 6_2:-817229 Msa0903600:CDS
TCCGAGTGCTAATGTACCTT+TGG 0.447911 6_2:-812072 Msa0903600:CDS
CACGATCATGAGAAGAAAAT+CGG 0.448821 6_2:+816206 None:intergenic
GAGTGTTGAACGTCCTGATC+TGG 0.449508 6_2:-816179 Msa0903600:CDS
TCTGACAAGAATGAAGTTGA+TGG 0.449745 6_2:-812542 Msa0903600:CDS
TCATTATCACCTCCAGCCTC+TGG 0.449905 6_2:+811613 None:intergenic
GCTAAGGTCAAGTTCTTGAA+TGG 0.450350 6_2:+813976 None:intergenic
GAAAGAGTAATCCTCGCTTC+CGG 0.451243 6_2:+813740 None:intergenic
TGAGGTCATGAAAGATTTCA+AGG 0.452200 6_2:-817102 Msa0903600:CDS
GAGGATAACTTTGTTGCCTA+TGG 0.453692 6_2:-811712 Msa0903600:CDS
TGCATTGAATTTCGACCAAA+TGG 0.453988 6_2:+816385 None:intergenic
CGCAAGTACTGAATGATCAC+TGG 0.457151 6_2:-813776 Msa0903600:CDS
GTTAACGGAGGAGGAGGTGG+GGG 0.458649 6_2:-817227 Msa0903600:CDS
CAAGACCATGGTCACCATAT+AGG 0.459075 6_2:+813270 None:intergenic
CCTTTCCGACTCATGCGATT+GGG 0.460266 6_2:+812667 None:intergenic
CCCTTTCCGACTCATGCGAT+TGG 0.461152 6_2:+812666 None:intergenic
TTGCTTCAACCCTTCTAAGA+AGG 0.461457 6_2:-808884 Msa0903600:three_prime_UTR
AGCGAAAATGTTTCTGAAGC+TGG 0.461684 6_2:-811568 Msa0903600:CDS
CCTCCGCCACCACCACCTCC+GGG 0.462154 6_2:+817254 None:intergenic
ACTGAATCATTTAATTTCCC+AGG 0.462924 6_2:+810640 None:intergenic
GAAGGTGCTGAAGAATTATC+TGG 0.464158 6_2:+816421 None:intergenic
GGAAAGATTCCGCAAATTGA+TGG 0.464870 6_2:-809214 Msa0903600:CDS
AGTTATTCAATAAAATTATG+AGG 0.465617 6_2:-812730 Msa0903600:CDS
CATCAGCTTCTCGGTCTCGC+AGG 0.469915 6_2:-809245 Msa0903600:CDS
TGTGATGCTGATGCACAAAC+TGG 0.470759 6_2:-811421 Msa0903600:CDS
AACAGCAACAGCAGCAATCT+CGG 0.471061 6_2:+810396 None:intergenic
GATGCACAAACTGGAGTAGA+TGG 0.473082 6_2:-811412 Msa0903600:CDS
AACATGATCTTGATAACAGC+AGG 0.473114 6_2:-816069 Msa0903600:CDS
TTTCTGATGTAGGTTTGAGC+TGG 0.475066 6_2:-813546 Msa0903600:intron
GGAAATACGAGTCTAGAAAT+GGG 0.477628 6_2:-811651 Msa0903600:CDS
ACCTTCTTGGAACCGATGCT+TGG 0.481962 6_2:-812698 Msa0903600:CDS
GAGTGCTAATGTACCTTTGG+TGG 0.483221 6_2:-812069 Msa0903600:CDS
GACATCAGCATCAGTAGGTC+GGG 0.485289 6_2:+812121 None:intergenic
TCTCAATTCAAACGACCCTA+TGG 0.486449 6_2:-817932 Msa0903600:CDS
AATGCAGCGCCTCAATGAGC+GGG 0.486636 6_2:-816368 Msa0903600:CDS
CTTGCCAGATTCTTTATGAA+AGG 0.488681 6_2:-811163 Msa0903600:intron
ATGTTCTCTGTCCTCCAACT+TGG 0.490073 6_2:+814060 None:intergenic
TGTCAAAGTAGTTAATGGAT+TGG 0.492576 6_2:-810068 Msa0903600:CDS
AAGGAGGGGAATATTCATAT+AGG 0.493747 6_2:-809041 Msa0903600:three_prime_UTR
TTCATTTGTTGAAGATGTGA+AGG 0.494932 6_2:-811320 Msa0903600:CDS
TCGGCTCTCGATCCAGCTCA+TGG 0.496091 6_2:-810437 Msa0903600:CDS
AGGGCTGAGGACAGGAAAGC+AGG 0.496502 6_2:-812647 Msa0903600:CDS
CTGCTGGTGATGAATGCTCC+CGG 0.497940 6_2:-811522 Msa0903600:CDS
CTTCCATCACCTCCTACGTT+AGG 0.499594 6_2:+812599 None:intergenic
TGAAGATATGGTCAAGGCCC+CGG 0.499928 6_2:-817272 Msa0903600:intron
TTTCAGGTGACCGATTTGCT+TGG 0.499956 6_2:-814439 Msa0903600:intron
GCAGAGGAAGCGTGAGAGCA+GGG 0.504129 6_2:-816122 Msa0903600:CDS
CTAACAGAGAGTCCAATTCA+AGG 0.504818 6_2:-812574 Msa0903600:CDS
TTGAAGATGTGAAGGATTCA+AGG 0.505444 6_2:-811312 Msa0903600:CDS
ACTTGCATTTGCCGCATCCC+GGG 0.505886 6_2:+816334 None:intergenic
ACCCTTCTAAGAAGGTTATG+TGG 0.505985 6_2:-808876 Msa0903600:three_prime_UTR
AATAACGAACAAGTTTATAC+AGG 0.511876 6_2:+812780 None:intergenic
TACATTAGCACTCGGAGACT+TGG 0.511993 6_2:+812079 None:intergenic
TAAAGAGAAGCAGCAGAAAG+AGG 0.512413 6_2:-812894 Msa0903600:CDS
TATGGTCAAGGCCCCGGAGG+TGG 0.512978 6_2:-817266 Msa0903600:CDS
TTAGAGCCACTTGCTGCTGA+TGG 0.513114 6_2:-814100 Msa0903600:intron
AAAGAAAACGGTTCTCTTGG+TGG 0.514518 6_2:-812467 Msa0903600:CDS
AATATATAAATTAATCAGAC+AGG 0.514617 6_2:-810820 Msa0903600:intron
CCATGAATTTACAGTTTAGG+TGG 0.516414 6_2:+809185 None:intergenic
TTACAGGCAGAGCATGAGTT+GGG 0.517425 6_2:+813222 None:intergenic
GCTGCTCATGATGATAAAGA+TGG 0.518148 6_2:-815980 Msa0903600:CDS
AATGAAGTTGATGGTAGAGT+AGG 0.518384 6_2:-812533 Msa0903600:CDS
GACAGAAACCTCTCTGATAA+CGG 0.520965 6_2:+811379 None:intergenic
ACTTGAGTAGATCTTCAAGA+TGG 0.522046 6_2:+818202 None:intergenic
ATCTTCAAGATGGGTTTGAT+CGG 0.525935 6_2:+818212 None:intergenic
GGTGGAGTTAACGGAGGAGG+AGG 0.526833 6_2:-817233 Msa0903600:CDS
GAAAGCAGTGATAAAGCCCC+TGG 0.527581 6_2:-812389 Msa0903600:CDS
CATTGGCAGCTACACTAGTC+CGG 0.529092 6_2:+812492 None:intergenic
AAGGACCTACAGATTGAAAC+CGG 0.529512 6_2:+810572 None:intergenic
AGAATGCTTTCCAAGCAAAT+CGG 0.530128 6_2:+814429 None:intergenic
TGTTCAGATGTGAAGATGAC+AGG 0.530892 6_2:-813683 Msa0903600:intron
GGAGGTGGAGTTAACGGAGG+AGG 0.532963 6_2:-817236 Msa0903600:CDS
ACAGCAACAGCAGCAATCTC+GGG 0.534699 6_2:+810397 None:intergenic
CTTGAGTAGATCTTCAAGAT+GGG 0.535665 6_2:+818203 None:intergenic
AGTCGGAAAGGGCTGAGGAC+AGG 0.535860 6_2:-812655 Msa0903600:CDS
CTGTGCATTTGAATCTCCAT+AGG 0.536629 6_2:+811696 None:intergenic
AAGCTTAGCGTCTTCCTCAT+CGG 0.537190 6_2:+810696 None:intergenic
TGATTGTGTAGGTATGAAGA+GGG 0.537685 6_2:-817984 Msa0903600:intron
ACTAACACGCCATTGGCCAC+TGG 0.538334 6_2:+811829 None:intergenic
TTCCTCCTCATGATCTTCCC+GGG 0.538480 6_2:+811504 None:intergenic
CGAGAGTGAAGGTGAAGCAG+AGG 0.539112 6_2:-811449 Msa0903600:CDS
ATCGTTCAGACTATTGCTGC+AGG 0.539751 6_2:-812866 Msa0903600:CDS
ATGGAACATGATGATGTTGA+TGG 0.540343 6_2:-811478 Msa0903600:CDS
TGGAGGACGCCATCAATTTG+CGG 0.540685 6_2:+809205 None:intergenic
ACTCTTTCAAACATATGCGC+AGG 0.541044 6_2:-813725 Msa0903600:CDS
ATCACGATCATCCAAGTTGG+AGG 0.541515 6_2:-814071 Msa0903600:CDS
GTTCTCAACTAACACGCCAT+TGG 0.541755 6_2:+811822 None:intergenic
AGCTGGATCGAGAGCCGAGA+AGG 0.542987 6_2:+810442 None:intergenic
TGAAATCTTTCATGACCTCA+AGG 0.544794 6_2:+817105 None:intergenic
GCGGCAAATGCAAGTAGATA+AGG 0.545427 6_2:-816326 Msa0903600:intron
CCCAATCGCATGAGTCGGAA+AGG 0.547446 6_2:-812667 Msa0903600:CDS
GCGTGAGAGCAGGGATAGAA+GGG 0.547489 6_2:-816113 Msa0903600:CDS
CAGTGAAGTGATCTTCAATA+CGG 0.549092 6_2:+813429 None:intergenic
GTCTTATGTGCTATTCACAT+TGG 0.549324 6_2:-810850 Msa0903600:CDS
TTTATCACGATCATCCAAGT+TGG 0.549919 6_2:-814074 Msa0903600:CDS
GCACCTAACGTAGGAGGTGA+TGG 0.551899 6_2:-812602 Msa0903600:CDS
AAGATACAAGGAGAAGTACA+TGG 0.552134 6_2:-814005 Msa0903600:CDS
AACTCGAAATGTGGAATGAG+AGG 0.553226 6_2:+812833 None:intergenic
CACTGGTACTGGAGGTGGAG+CGG 0.553326 6_2:+811846 None:intergenic
CGTATTGAAGATCACTTCAC+TGG 0.555491 6_2:-813428 Msa0903600:intron
ATTACAGGCAGAGCATGAGT+TGG 0.556003 6_2:+813221 None:intergenic
GCTGCCAATGACAAAGAAAA+CGG 0.556164 6_2:-812479 Msa0903600:CDS
GCATTGTATAATTTGCTCGA+TGG 0.557862 6_2:-810927 Msa0903600:CDS
GAACATAGGCGTGAGACGGA+TGG 0.558726 6_2:-814043 Msa0903600:CDS
ACCACATAACCTTCTTAGAA+GGG 0.559366 6_2:+808875 None:intergenic
ATTTCCTTCTATCGTCATTG+TGG 0.560313 6_2:+811668 None:intergenic
GCATGAGTCGGAAAGGGCTG+AGG 0.562256 6_2:-812660 Msa0903600:CDS
GAAAAGTCAAACTCGAAATG+TGG 0.564709 6_2:+812824 None:intergenic
TTGATTGTGTAGGTATGAAG+AGG 0.565183 6_2:-817985 Msa0903600:intron
TCTCGCTGCTTGTTCATCAG+AGG 0.565468 6_2:+812349 None:intergenic
GACGGATGGAGGTAAAGAGA+AGG 0.565586 6_2:-814029 Msa0903600:CDS
TGCTAATGTACCTTTGGTGG+AGG 0.568531 6_2:-812066 Msa0903600:intron
GAGCGGGGTTCTATGGCACC+CGG 0.569077 6_2:-816352 Msa0903600:CDS
AGCAGTGTGCATATGTCCCC+AGG 0.569312 6_2:-812296 Msa0903600:intron
CCAATCGCATGAGTCGGAAA+GGG 0.570311 6_2:-812666 Msa0903600:CDS
TACAGGATGTACCTTGCGTA+AGG 0.570569 6_2:+811068 None:intergenic
TCAGCATCAGTAGGTCGGGT+TGG 0.570850 6_2:+812125 None:intergenic
GAGAGTGAAGGTGAAGCAGA+GGG 0.572305 6_2:-811448 Msa0903600:CDS
AGACATCAGCATCAGTAGGT+CGG 0.572882 6_2:+812120 None:intergenic
TATACGAGTATGAAAAGTCT+CGG 0.573722 6_2:-810666 Msa0903600:CDS
TGAATTTACAGTTTAGGTGG+AGG 0.574319 6_2:+809188 None:intergenic
TGAAAGTTACGTACATCGGC+CGG 0.575323 6_2:+813917 None:intergenic
AACAACGTTTGCAGTCGCTA+AGG 0.575680 6_2:+813960 None:intergenic
TGTTGAAAATAAGATTAGTG+TGG 0.575761 6_2:-813462 Msa0903600:CDS
CGCTCCACCTCCAGTACCAG+TGG 0.577034 6_2:-811845 Msa0903600:CDS
TCCGAGCTACCGACTTCTAC+CGG 0.577448 6_2:-813936 Msa0903600:CDS
TGCTGGTGATGAATGCTCCC+GGG 0.577683 6_2:-811521 Msa0903600:CDS
TAAAGAGAAGGAAAGATACA+AGG 0.578798 6_2:-814017 Msa0903600:CDS
ATCACCACGTGATGAACCAT+AGG 0.580105 6_2:+817916 None:intergenic
GGTATATGTTCTCCTCATGA+AGG 0.581471 6_2:+810593 None:intergenic
TCTTGATGTGGCAACAACCT+AGG 0.582290 6_2:-809122 Msa0903600:three_prime_UTR
ATGTGTGTGTAATCTGTATG+AGG 0.586894 6_2:-809017 Msa0903600:three_prime_UTR
ATCTGTGACTTCCGGAAGCG+AGG 0.588696 6_2:-813751 Msa0903600:CDS
CATCTTTACCGTTATCAGAG+AGG 0.590079 6_2:-811387 Msa0903600:CDS
TTCATGAGGAGAACATATAC+CGG 0.591256 6_2:-810591 Msa0903600:CDS
GCAGATACATGCTTTGTGAG+AGG 0.591857 6_2:+811346 None:intergenic
ACCAAGCATCGGTTCCAAGA+AGG 0.594776 6_2:+812697 None:intergenic
TCGGTCTCGCAGGGAAAGAG+AGG 0.595406 6_2:-809235 Msa0903600:CDS
CAATGCAGCGCCTCAATGAG+CGG 0.595730 6_2:-816369 Msa0903600:CDS
CCATAGAACCCCGCTCATTG+AGG 0.596542 6_2:+816359 None:intergenic
TCAGATCGCTGACTAGCAGT+AGG 0.596565 6_2:+813807 None:intergenic
ATGTGAATAGCACATAAGAC+TGG 0.597599 6_2:+810853 None:intergenic
TGTGTATGAAGATATGGTCA+AGG 0.597615 6_2:-817278 Msa0903600:intron
CCTCCAGTACCAGTGGCCAA+TGG 0.597633 6_2:-811838 Msa0903600:CDS
GAAGCTGGTGAAGATGTGTC+AGG 0.597921 6_2:-811553 Msa0903600:CDS
ATGAAAAGTCTCGGAAACCT+GGG 0.598934 6_2:-810657 Msa0903600:CDS
CTCCTCAGAGTCAGCATTCG+GGG 0.599631 6_2:+811732 None:intergenic
ATCAGCTTCTCGGTCTCGCA+GGG 0.600655 6_2:-809244 Msa0903600:CDS
GTACATCGGCCGGTAGAAGT+CGG 0.605281 6_2:+813927 None:intergenic
TGAAGCAGAAACAAGAGGAG+TGG 0.606159 6_2:-813187 Msa0903600:CDS
AACTTCCCAATCGCATGAGT+CGG 0.608820 6_2:-812672 Msa0903600:CDS
GATGTACTTGATGATGATGA+TGG 0.609778 6_2:+809264 None:intergenic
AAAATATGACATGTTCCTTG+AGG 0.610450 6_2:-817120 Msa0903600:CDS
ATAGAGACATCAGCATCAGT+AGG 0.611342 6_2:+812116 None:intergenic
TGGGAAGTTACACCAAGCAT+CGG 0.611514 6_2:+812686 None:intergenic
TATCACCTCCAGCCTCTGGA+CGG 0.613337 6_2:+811617 None:intergenic
GATATCTTGCAACTCATCCA+AGG 0.615932 6_2:-810038 Msa0903600:intron
ACTTGTTCGTTATTCATGTG+AGG 0.618582 6_2:-812771 Msa0903600:CDS
CAGAGAACATAGGCGTGAGA+CGG 0.618824 6_2:-814047 Msa0903600:CDS
AAATGACCATCAGCAGCAAG+TGG 0.621642 6_2:+814094 None:intergenic
AATGGAGCATGCTGTGTGGA+AGG 0.623233 6_2:+816403 None:intergenic
AGAACTGTTTAACAAATCCA+GGG 0.625745 6_2:+812372 None:intergenic
ACCAAAGGTACATTAGCACT+CGG 0.627066 6_2:+812071 None:intergenic
TCTGTTGCACCTAACGTAGG+AGG 0.627975 6_2:-812608 Msa0903600:CDS
TTCAAACTTGGCATTCTCGG+CGG 0.628512 6_2:+810902 None:intergenic
TCGATTGAAGCAGAAACAAG+AGG 0.630186 6_2:-813192 Msa0903600:CDS
CTCCGCCACCACCACCTCCG+GGG 0.631309 6_2:+817255 None:intergenic
TGCACATGTTATCCTTCATG+AGG 0.631484 6_2:-810605 Msa0903600:CDS
TTCTGATGCTGAAATTCACG+AGG 0.632331 6_2:-812804 Msa0903600:CDS
CCCGAATGCTGACTCTGAGG+AGG 0.632506 6_2:-811731 Msa0903600:CDS
TGAACTTTCACAAGGAGCAG+AGG 0.640184 6_2:-816138 Msa0903600:CDS
ATGATGCAAACTATTTACAA+AGG 0.640470 6_2:+808972 None:intergenic
ATGCTCCCGGGAAGATCATG+AGG 0.641352 6_2:-811509 Msa0903600:CDS
GTGTCAGGAAGTGAGTCTGC+TGG 0.641941 6_2:-811538 Msa0903600:CDS
CCATTGGCCACTGGTACTGG+AGG 0.644559 6_2:+811838 None:intergenic
CATAGGCGTGAGACGGATGG+AGG 0.647806 6_2:-814040 Msa0903600:CDS
GGAGAAGTTGAGCAGCGCTG+AGG 0.647893 6_2:-815235 Msa0903600:CDS
GAAACTCATACCTCCACCAA+AGG 0.649483 6_2:+812056 None:intergenic
TGAAGATGTGAAGGATTCAA+GGG 0.650035 6_2:-811311 Msa0903600:CDS
CAAGATGGGTTTGATCGGAG+AGG 0.650954 6_2:+818217 None:intergenic
AGCGGGGTTCTATGGCACCC+GGG 0.656076 6_2:-816351 Msa0903600:CDS
ATCCCCGAATGCTGACTCTG+AGG 0.661035 6_2:-811734 Msa0903600:CDS
GCAAGTACTGAATGATCACT+GGG 0.663594 6_2:-813775 Msa0903600:CDS
CAGAAACAAACCGAAATATG+GGG 0.665228 6_2:-810131 Msa0903600:CDS
CTCGTCAGCTCGTTTAGCAG+CGG 0.666549 6_2:+813499 None:intergenic
AGATACAAGGAGAAGTACAT+GGG 0.666573 6_2:-814004 Msa0903600:CDS
GATGGTAAAGCCGAGAGTGA+AGG 0.667991 6_2:-811460 Msa0903600:CDS
GAAATACGAGTCTAGAAATG+GGG 0.668085 6_2:-811650 Msa0903600:CDS
GTTCTACAGATCCTTACGCA+AGG 0.668821 6_2:-811079 Msa0903600:intron
AGTTGGAGGACAGAGAACAT+AGG 0.668867 6_2:-814057 Msa0903600:CDS
GAACGCCTATATGGTGACCA+TGG 0.669220 6_2:-813275 Msa0903600:CDS
CTCCCGGGAAGATCATGAGG+AGG 0.670660 6_2:-811506 Msa0903600:CDS
AACAATGATGAACTTTCACA+AGG 0.676468 6_2:-816146 Msa0903600:CDS
TCACCACGTGATGAACCATA+GGG 0.677183 6_2:+817917 None:intergenic
ATACGAGTCTAGAAATGGGG+AGG 0.677243 6_2:-811647 Msa0903600:CDS
TCAAACTGTTGCAACCGATG+AGG 0.677271 6_2:-810710 Msa0903600:CDS
TGTCTAAGACATCAAGACCA+TGG 0.679362 6_2:+813258 None:intergenic
GAACTGTTTAACAAATCCAG+GGG 0.690057 6_2:+812373 None:intergenic
GGCGGAGGTGGAGTTAACGG+AGG 0.690346 6_2:-817239 Msa0903600:CDS
AGTTCTGTTGCACCTAACGT+AGG 0.693937 6_2:-812611 Msa0903600:CDS
ACATGATCTTGATAACAGCA+GGG 0.695132 6_2:-816068 Msa0903600:CDS
AGAGTGAAGGTGAAGCAGAG+GGG 0.699362 6_2:-811447 Msa0903600:CDS
ACCAAATGGAGCATGCTGTG+TGG 0.702132 6_2:+816399 None:intergenic
TTCATACAAGAGTCTTGATG+TGG 0.710405 6_2:-809134 Msa0903600:three_prime_UTR
GAGCACCGTCCAGAGGCTGG+AGG 0.711256 6_2:-811622 Msa0903600:CDS
CTTTCCAGTAAAATGCCGTG+AGG 0.738774 6_2:+810310 None:intergenic
AGATATGGTCAAGGCCCCGG+AGG 0.761750 6_2:-817269 Msa0903600:CDS
TTTGGTGTGAGAGAAAACGG+TGG 0.812380 6_2:+818375 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTGAATTTAATTTGATTT+TGG - chr6_2:809643-809662 Msa0903600:intron 10.0%
!!! TTTTTTAAATAAAAAACTCT+AGG - chr6_2:810797-810816 Msa0903600:intron 10.0%
!! ATAATTATACATATTTAGAT+TGG - chr6_2:812512-812531 Msa0903600:CDS 10.0%
!!! TAAATTTTGTTTATATTTCA+AGG - chr6_2:815136-815155 Msa0903600:intron 10.0%
!! AAATCTATAAAAAATTATAG+AGG - chr6_2:817030-817049 Msa0903600:intron 10.0%
!! ATGATTTAAATATTGATAAA+AGG + chr6_2:817372-817391 None:intergenic 10.0%
!!! TGAAATTGAAATTTTGATTT+TGG - chr6_2:809444-809463 Msa0903600:intron 15.0%
!!! AATTTTGTTTTTTTAGTCTT+GGG - chr6_2:809500-809519 Msa0903600:intron 15.0%
!!! GTCTATATTTATTACATTTT+TGG - chr6_2:811386-811405 Msa0903600:CDS 15.0%
!! ACTTGTGTTATAAAATATAA+CGG - chr6_2:811474-811493 Msa0903600:CDS 15.0%
!! TTATAAAATATAACGGTTAT+TGG - chr6_2:811481-811500 Msa0903600:CDS 15.0%
!! TACAAGAATTTATATTTGTT+TGG - chr6_2:811681-811700 Msa0903600:CDS 15.0%
!! CAAAACATAGAAAATTATAA+AGG + chr6_2:811968-811987 None:intergenic 15.0%
!! AAAGAATGATTTACAAAATT+TGG - chr6_2:812137-812156 Msa0903600:CDS 15.0%
!!! ACAATTTTTTACTTCATTTT+AGG - chr6_2:813084-813103 Msa0903600:CDS 15.0%
!! AGTTATTCAATAAAATTATG+AGG - chr6_2:814567-814586 Msa0903600:intron 15.0%
!!! ATCATTTAATGGATAATAAA+GGG - chr6_2:814873-814892 Msa0903600:intron 15.0%
!! AGAAAAAAAAAAAAATCATG+TGG + chr6_2:815050-815069 None:intergenic 15.0%
!! AAGTATAAAAACTAGATAAA+AGG + chr6_2:815289-815308 None:intergenic 15.0%
!! TTTAATGCTTATATTGATAT+CGG - chr6_2:815397-815416 Msa0903600:intron 15.0%
!!! TCTTTTTTTGTTTAGATTTA+TGG - chr6_2:816345-816364 Msa0903600:CDS 15.0%
!! AATATATAAATTAATCAGAC+AGG - chr6_2:816477-816496 Msa0903600:CDS 15.0%
!!! AAACAATATTTTACAACTAT+TGG - chr6_2:817470-817489 Msa0903600:intron 15.0%
!!! ATAAAAATGTTATTTTTCCT+AGG + chr6_2:818195-818214 None:intergenic 15.0%
!! ATTGAAGAAAAATATCAATT+TGG + chr6_2:818373-818392 None:intergenic 15.0%
!!! AAATTGATATTTTTCTTCAA+TGG - chr6_2:818372-818391 Msa0903600:five_prime_UTR 15.0%
!! AATTAAAAGTTCTTATTGTA+AGG - chr6_2:818461-818480 Msa0903600:five_prime_UTR 15.0%
!! GAAAAAAAAAAACAAGTTGT+TGG + chr6_2:809034-809053 None:intergenic 20.0%
!! CAAGACTAAAAAAACAAAAT+TGG + chr6_2:809501-809520 None:intergenic 20.0%
!!! CAATTTTGTTTTTTTAGTCT+TGG - chr6_2:809499-809518 Msa0903600:intron 20.0%
!! ACTTATATCTATTTCACTTA+TGG - chr6_2:809582-809601 Msa0903600:intron 20.0%
!!! AATTGTTGTTGAATTTCATT+AGG - chr6_2:809610-809629 Msa0903600:intron 20.0%
!!! ATTGTTGTTGAATTTCATTA+GGG - chr6_2:809611-809630 Msa0903600:intron 20.0%
!! TAATTGTTGTAGATTTCATT+AGG - chr6_2:809753-809772 Msa0903600:intron 20.0%
!! AATTGTTGTAGATTTCATTA+GGG - chr6_2:809754-809773 Msa0903600:intron 20.0%
!!! ATTTGAGTTTAAATTGATTG+TGG - chr6_2:809786-809805 Msa0903600:intron 20.0%
!!! TTTGTAATGATTTTGAATGA+CGG - chr6_2:810249-810268 Msa0903600:intron 20.0%
!! TGTTAAATCCAAAAATCAAA+TGG + chr6_2:810387-810406 None:intergenic 20.0%
!!! ACATGTTTACAAATCATTTT+TGG - chr6_2:810632-810651 Msa0903600:CDS 20.0%
!!! CATTTCCTCTTAATTTTTTT+AGG + chr6_2:811521-811540 None:intergenic 20.0%
!! AAACAAATAAGAAGAAATAG+TGG + chr6_2:811658-811677 None:intergenic 20.0%
!!! ACTATTTCTTCTTATTTGTT+TGG - chr6_2:811657-811676 Msa0903600:CDS 20.0%
!! TATGGCAGTAATATAAATAA+TGG + chr6_2:811717-811736 None:intergenic 20.0%
!! TAAAGAAAGAAAAAGTGATA+TGG + chr6_2:811735-811754 None:intergenic 20.0%
!! TACAACAGAAAATGATAAAT+TGG + chr6_2:812707-812726 None:intergenic 20.0%
!!! TTTTATCAATTCATTGAAGT+AGG - chr6_2:812746-812765 Msa0903600:CDS 20.0%
!! TATAATATTTACTCATTCCT+TGG - chr6_2:812980-812999 Msa0903600:intron 20.0%
!! ATAATATTTACTCATTCCTT+GGG - chr6_2:812981-813000 Msa0903600:intron 20.0%
!!! GCATTTTTTTTTCATTCATT+TGG - chr6_2:813145-813164 Msa0903600:CDS 20.0%
!! TTCAGATTTCAATAAAGTTT+GGG - chr6_2:814144-814163 Msa0903600:intron 20.0%
!! TATTGAATAACTCTTTACTT+TGG + chr6_2:814559-814578 None:intergenic 20.0%
!!! GATCATTTAATGGATAATAA+AGG - chr6_2:814872-814891 Msa0903600:intron 20.0%
!! TAAACCTAATACATAATTAC+AGG + chr6_2:816249-816268 None:intergenic 20.0%
!! ATGCTAAAATAAAGAATTGA+TGG + chr6_2:817085-817104 None:intergenic 20.0%
!! AAATGAGGAAAAACTTATTA+AGG + chr6_2:817437-817456 None:intergenic 20.0%
!! TACAACTATTGGTATATAAT+TGG - chr6_2:817481-817500 Msa0903600:intron 20.0%
!! AACAAATGTTAATCTAACAA+AGG - chr6_2:817518-817537 Msa0903600:intron 20.0%
!! TCAAATTACCTTGTAAATAT+AGG + chr6_2:817687-817706 None:intergenic 20.0%
!!! TTATTTTGACACAATTTAGT+GGG + chr6_2:817803-817822 None:intergenic 20.0%
!!! ATTATTTTGACACAATTTAG+TGG + chr6_2:817804-817823 None:intergenic 20.0%
!! GAATTAAACAATTCATCATT+TGG + chr6_2:817872-817891 None:intergenic 20.0%
!!! TCATATAGTTTTTCTATCTT+TGG - chr6_2:817912-817931 Msa0903600:intron 20.0%
!!! ATTTTCATATGAAAAAGTGA+AGG - chr6_2:818237-818256 Msa0903600:five_prime_UTR 20.0%
! TGAGAGAAAAAAATGAAAGA+AGG + chr6_2:808862-808881 None:intergenic 25.0%
!! AAACAAGTTGTTGGATTTTA+AGG + chr6_2:809025-809044 None:intergenic 25.0%
!!! TTGTGATTTTTTGATTGTGT+AGG - chr6_2:809302-809321 Msa0903600:CDS 25.0%
! AACAGTGAAACACAAAATTA+GGG + chr6_2:809682-809701 None:intergenic 25.0%
! GTTGTTGTATAAAACTTACT+AGG - chr6_2:809810-809829 Msa0903600:intron 25.0%
!!! ATGAATTTTGATAGTGTTGT+AGG - chr6_2:809937-809956 Msa0903600:intron 25.0%
!!! TGTTGTAGTTGTTGATAATT+AGG - chr6_2:809972-809991 Msa0903600:intron 25.0%
!!! GTTGTAGTTGTTGATAATTA+GGG - chr6_2:809973-809992 Msa0903600:intron 25.0%
!!! ATCATTGGTTGTCAATTTTT+GGG + chr6_2:810107-810126 None:intergenic 25.0%
!!! TAGTTTTGTGAACAAGATAA+AGG - chr6_2:810495-810514 Msa0903600:intron 25.0%
!!! AATTGATTCGTAGCTTTAAT+TGG - chr6_2:810571-810590 Msa0903600:intron 25.0%
!! TGTAAACATGTTCATCATTT+TGG + chr6_2:810623-810642 None:intergenic 25.0%
!!! AGCTTTGTCCTATAAATTTT+TGG - chr6_2:810716-810735 Msa0903600:intron 25.0%
!! TTAACAGATTTCTTTTTGTC+AGG + chr6_2:811275-811294 None:intergenic 25.0%
! TAAGATATCATACTATGCTT+TGG - chr6_2:811349-811368 Msa0903600:CDS 25.0%
!!! TTTTTTTCAACTCCAAACAT+GGG + chr6_2:811818-811837 None:intergenic 25.0%
!!! ATTTTTTTCAACTCCAAACA+TGG + chr6_2:811819-811838 None:intergenic 25.0%
! AAAATTCAAGAAACTTGACA+TGG + chr6_2:811866-811885 None:intergenic 25.0%
!!! TTGAAGTGCCTTAATATTTT+TGG - chr6_2:812099-812118 Msa0903600:CDS 25.0%
! ATATTTAGATTGGATGTCTA+TGG - chr6_2:812522-812541 Msa0903600:CDS 25.0%
! TAATATTTACTCATTCCTTG+GGG - chr6_2:812982-813001 Msa0903600:intron 25.0%
!!! AAATCGATTACTTTTCTTGT+TGG - chr6_2:813402-813421 Msa0903600:intron 25.0%
!!! AACATTGTTATTTCTGATGT+AGG - chr6_2:813741-813760 Msa0903600:CDS 25.0%
! TGTTGAAAATAAGATTAGTG+TGG - chr6_2:813835-813854 Msa0903600:intron 25.0%
! TATAACGAAGTAGAGAAATA+AGG + chr6_2:813938-813957 None:intergenic 25.0%
! CTGCATAAACATGTATATAT+CGG + chr6_2:813982-814001 None:intergenic 25.0%
!!! TTTATGCAGTTCTAAATCTA+AGG - chr6_2:813993-814012 Msa0903600:CDS 25.0%
! GTTCAGATTTCAATAAAGTT+TGG - chr6_2:814143-814162 Msa0903600:intron 25.0%
! AATAACGAACAAGTTTATAC+AGG + chr6_2:814520-814539 None:intergenic 25.0%
! TAGTAGAGATGATCATTTAA+TGG - chr6_2:814862-814881 Msa0903600:intron 25.0%
! TTATATTGATATCGGTATGT+CGG - chr6_2:815405-815424 Msa0903600:intron 25.0%
! ATGATTTCTTTGTTCTCTTT+AGG - chr6_2:816024-816043 Msa0903600:CDS 25.0%
! TATATAAGACATCAACACAA+AGG + chr6_2:816103-816122 None:intergenic 25.0%
! ACATCCTGTAATTATGTATT+AGG - chr6_2:816242-816261 Msa0903600:intron 25.0%
! TCTAAACAAAAAAAGAACAG+TGG + chr6_2:816341-816360 None:intergenic 25.0%
!! TGTCATTTGTTTCTCTTTAA+AGG - chr6_2:816531-816550 Msa0903600:intron 25.0%
!! ACTTTTCATACTCGTATAAT+TGG + chr6_2:816629-816648 None:intergenic 25.0%
! TGCAGATAAAATGAAAAATC+TGG + chr6_2:816930-816949 None:intergenic 25.0%
!!! AAGTTTTTCCTCATTTTTGT+AGG - chr6_2:817441-817460 Msa0903600:intron 25.0%
! TTATTCATCCTACAAAAATG+AGG + chr6_2:817452-817471 None:intergenic 25.0%
! GTTAATCTAACAAAGGAATT+AGG - chr6_2:817525-817544 Msa0903600:intron 25.0%
! ATAATGACACATAAAAACTC+AGG + chr6_2:817614-817633 None:intergenic 25.0%
! TTGAAGAACCTATATTTACA+AGG - chr6_2:817676-817695 Msa0903600:intron 25.0%
! AAACAATTCATCATTTGGAT+TGG + chr6_2:817867-817886 None:intergenic 25.0%
! ATGATGCAAACTATTTACAA+AGG + chr6_2:818328-818347 None:intergenic 25.0%
! TTTTCTCAGCATAATTTTCG+TGG - chr6_2:809123-809142 Msa0903600:three_prime_UTR 30.0%
! TTTCTCAGCATAATTTTCGT+GGG - chr6_2:809124-809143 Msa0903600:three_prime_UTR 30.0%
!!! TTTTTTCCCTTTTCACTTTC+TGG - chr6_2:809165-809184 Msa0903600:three_prime_UTR 30.0%
! TTTTTCCCTTTTCACTTTCT+GGG - chr6_2:809166-809185 Msa0903600:three_prime_UTR 30.0%
AACAGTGAAACACAAGATTA+GGG + chr6_2:809538-809557 None:intergenic 30.0%
CAACAGTGAAACACAAAATT+AGG + chr6_2:809683-809702 None:intergenic 30.0%
! GCATTTTGTGTATGAAGATA+TGG - chr6_2:810013-810032 Msa0903600:intron 30.0%
!! CATCATTGGTTGTCAATTTT+TGG + chr6_2:810108-810127 None:intergenic 30.0%
! CAAATAGGATAAAGCATCAT+TGG + chr6_2:810122-810141 None:intergenic 30.0%
TGATGCTTTATCCTATTTGA+AGG - chr6_2:810123-810142 Msa0903600:CDS 30.0%
AAAATATGACATGTTCCTTG+AGG - chr6_2:810177-810196 Msa0903600:intron 30.0%
TTAAGATCCCCTGATTATTT+AGG + chr6_2:810284-810303 None:intergenic 30.0%
!!! ATTTATTTTTGGCTGTTTCC+AGG - chr6_2:810308-810327 Msa0903600:intron 30.0%
ATATGAGATAACACTTGATG+AGG - chr6_2:810423-810442 Msa0903600:CDS 30.0%
! TCAAATTCAACCGTTTTCTT+CGG + chr6_2:810466-810485 None:intergenic 30.0%
ATTATACCGGTAAACTAACT+TGG + chr6_2:810554-810573 None:intergenic 30.0%
AAGCTACGAATCAATTATAC+CGG + chr6_2:810567-810586 None:intergenic 30.0%
! GCAAAGTGCCAAAAATTTAT+AGG + chr6_2:810727-810746 None:intergenic 30.0%
AGAATTATCTGGTAAGAATC+TGG + chr6_2:810868-810887 None:intergenic 30.0%
AAAAATCGTTATGAAGAGGA+AGG + chr6_2:811006-811025 None:intergenic 30.0%
GTACAAAAATCGTTATGAAG+AGG + chr6_2:811010-811029 None:intergenic 30.0%
! TACTTTTACAGCAACGATAT+CGG - chr6_2:811063-811082 Msa0903600:intron 30.0%
AACAATGATGAACTTTCACA+AGG - chr6_2:811151-811170 Msa0903600:CDS 30.0%
ACAGCATATTGAAAACATGA+TGG + chr6_2:811442-811461 None:intergenic 30.0%
CACAGCCTAAAAAAATTAAG+AGG - chr6_2:811513-811532 Msa0903600:CDS 30.0%
GATGCATAGAACTTACTATT+AGG - chr6_2:811765-811784 Msa0903600:CDS 30.0%
CATAGAACTTACTATTAGGA+CGG - chr6_2:811769-811788 Msa0903600:CDS 30.0%
TTAGTATTTGTTTGTCCTGT+TGG - chr6_2:811892-811911 Msa0903600:intron 30.0%
!!! TGCCTTAATATTTTTGGCAA+CGG - chr6_2:812105-812124 Msa0903600:CDS 30.0%
TTCCGTTGCCAAAAATATTA+AGG + chr6_2:812110-812129 None:intergenic 30.0%
! TATGTGCTTCATTTTCGTAT+TGG - chr6_2:812160-812179 Msa0903600:intron 30.0%
AAAAGTCCTAGAGATCTAAA+GGG + chr6_2:812206-812225 None:intergenic 30.0%
TAAAAGTCCTAGAGATCTAA+AGG + chr6_2:812207-812226 None:intergenic 30.0%
TACTCAAATGCTTTCACTTA+TGG - chr6_2:812277-812296 Msa0903600:intron 30.0%
ACTCAAATGCTTTCACTTAT+GGG - chr6_2:812278-812297 Msa0903600:intron 30.0%
GCAACTTTGGACAAATTATT+TGG - chr6_2:812305-812324 Msa0903600:CDS 30.0%
! TATCATTTTCTTTTCGGCTA+AGG + chr6_2:812346-812365 None:intergenic 30.0%
TTAGCCGAAAAGAAAATGAT+AGG - chr6_2:812345-812364 Msa0903600:CDS 30.0%
! AGCTCCTATCATTTTCTTTT+CGG + chr6_2:812352-812371 None:intergenic 30.0%
ATAGTGTGTATGAAAGGTTT+AGG - chr6_2:812375-812394 Msa0903600:CDS 30.0%
TAGTGTGTATGAAAGGTTTA+GGG - chr6_2:812376-812395 Msa0903600:CDS 30.0%
GAATGACAATCCAAAAACTA+GGG + chr6_2:812564-812583 None:intergenic 30.0%
AGAATGACAATCCAAAAACT+AGG + chr6_2:812565-812584 None:intergenic 30.0%
!! TAGTTTTTGGATTGTCATTC+TGG - chr6_2:812564-812583 Msa0903600:CDS 30.0%
CAAAAGGATATAAATTGCTC+TGG + chr6_2:812829-812848 None:intergenic 30.0%
CCTGAAACATACATTTCAAA+AGG + chr6_2:812845-812864 None:intergenic 30.0%
!!! CCTTTTGAAATGTATGTTTC+AGG - chr6_2:812842-812861 Msa0903600:CDS 30.0%
!! TTAGAGCGTTGTGAAAATAT+TGG - chr6_2:812918-812937 Msa0903600:CDS 30.0%
TAAAGAGAAGGAAAGATACA+AGG - chr6_2:813280-813299 Msa0903600:CDS 30.0%
GATTTGAAAGTTACGTACAT+CGG + chr6_2:813387-813406 None:intergenic 30.0%
AATGTTCATTTCAGAGTCAT+TGG - chr6_2:813670-813689 Msa0903600:intron 30.0%
TTCAATCGAGTCAATATTAC+AGG + chr6_2:814094-814113 None:intergenic 30.0%
CATTGAACTCTGTACTAAAT+TGG - chr6_2:814290-814309 Msa0903600:intron 30.0%
CTGTTGCAATATTTCATGTT+TGG - chr6_2:814345-814364 Msa0903600:intron 30.0%
TCAATAAAATTATGAGGCTC+TGG - chr6_2:814573-814592 Msa0903600:intron 30.0%
! ACTTCATTCTTGTCAGATTT+TGG + chr6_2:814752-814771 None:intergenic 30.0%
AGAGTAGGTGAAGTTAAAAA+TGG - chr6_2:814779-814798 Msa0903600:intron 30.0%
AGAACTGTTTAACAAATCCA+GGG + chr6_2:814928-814947 None:intergenic 30.0%
GTACACAACTATGTTGTATA+CGG + chr6_2:815028-815047 None:intergenic 30.0%
AAAATAAAACCCTTCGACTA+AGG + chr6_2:815377-815396 None:intergenic 30.0%
!!! TCTTCTTTTTCAACTTTGCA+AGG + chr6_2:815534-815553 None:intergenic 30.0%
TTGCAAAGTTGAAAAAGAAG+AGG - chr6_2:815533-815552 Msa0903600:intron 30.0%
TGCAAAGTTGAAAAAGAAGA+GGG - chr6_2:815534-815553 Msa0903600:intron 30.0%
! TTCATTTGTTGAAGATGTGA+AGG - chr6_2:815977-815996 Msa0903600:CDS 30.0%
AGATCCTTTCATAAAGAATC+TGG + chr6_2:816141-816160 None:intergenic 30.0%
GAAACAAATGACAAGTATGT+AGG + chr6_2:816524-816543 None:intergenic 30.0%
TATACGAGTATGAAAAGTCT+CGG - chr6_2:816631-816650 Msa0903600:intron 30.0%
! ACTGAATCATTTAATTTCCC+AGG + chr6_2:816660-816679 None:intergenic 30.0%
TCAGAAACAAACCGAAATAT+GGG - chr6_2:817165-817184 Msa0903600:CDS 30.0%
GAAGATGTCAAAGTAGTTAA+TGG - chr6_2:817224-817243 Msa0903600:CDS 30.0%
! TGTCAAAGTAGTTAATGGAT+TGG - chr6_2:817229-817248 Msa0903600:CDS 30.0%
! TATGAAAAAGAAGCATACCT+TGG + chr6_2:817279-817298 None:intergenic 30.0%
! TAAAGTACTAACCTGCAAAA+TGG + chr6_2:817319-817338 None:intergenic 30.0%
TCAAACATTTCAAATCCAGA+GGG + chr6_2:817640-817659 None:intergenic 30.0%
ATCAAACATTTCAAATCCAG+AGG + chr6_2:817641-817660 None:intergenic 30.0%
ATTTAGTGGGAAAAAGCTTT+CGG + chr6_2:817790-817809 None:intergenic 30.0%
TCACCATGAATTTACAGTTT+AGG + chr6_2:818118-818137 None:intergenic 30.0%
TTCATATGAAAAAGTGAAGG+AGG - chr6_2:818240-818259 Msa0903600:five_prime_UTR 30.0%
TCATATGAAAAAGTGAAGGA+GGG - chr6_2:818241-818260 Msa0903600:five_prime_UTR 30.0%
!! AGTTTTGGTGTGAGAGAAAA+CGG + chr6_2:808928-808947 None:intergenic 35.0%
! ATCTTCAAGATGGGTTTGAT+CGG + chr6_2:809088-809107 None:intergenic 35.0%
CTTGAGTAGATCTTCAAGAT+GGG + chr6_2:809097-809116 None:intergenic 35.0%
ACTTGAGTAGATCTTCAAGA+TGG + chr6_2:809098-809117 None:intergenic 35.0%
TTGATTGTGTAGGTATGAAG+AGG - chr6_2:809312-809331 Msa0903600:CDS 35.0%
TGATTGTGTAGGTATGAAGA+GGG - chr6_2:809313-809332 Msa0903600:CDS 35.0%
TGGCGCATTAACACAAAATA+GGG + chr6_2:809481-809500 None:intergenic 35.0%
TTGGCGCATTAACACAAAAT+AGG + chr6_2:809482-809501 None:intergenic 35.0%
CAACAGTGAAACACAAGATT+AGG + chr6_2:809539-809558 None:intergenic 35.0%
ACCTATATCTATCTCACTTG+CGG - chr6_2:809726-809745 Msa0903600:intron 35.0%
TGTGTATGAAGATATGGTCA+AGG - chr6_2:810019-810038 Msa0903600:intron 35.0%
!! ATTGGTTGTCAATTTTTGGG+AGG + chr6_2:810104-810123 None:intergenic 35.0%
GTCTTTCACTTCCTTCAAAT+AGG + chr6_2:810137-810156 None:intergenic 35.0%
TGAAATCTTTCATGACCTCA+AGG + chr6_2:810195-810214 None:intergenic 35.0%
TGAGGTCATGAAAGATTTCA+AGG - chr6_2:810195-810214 Msa0903600:intron 35.0%
AACGTTGTGCCTAAATAATC+AGG - chr6_2:810272-810291 Msa0903600:intron 35.0%
ACGTTGTGCCTAAATAATCA+GGG - chr6_2:810273-810292 Msa0903600:intron 35.0%
AGGGTTAAGGAACTATTCAA+AGG - chr6_2:810355-810374 Msa0903600:CDS 35.0%
!! GGTCACAACCATTTGATTTT+TGG - chr6_2:810376-810395 Msa0903600:CDS 35.0%
ATTTAACACTTTCCTGCCAA+AGG - chr6_2:810399-810418 Msa0903600:CDS 35.0%
TTTAACACTTTCCTGCCAAA+GGG - chr6_2:810400-810419 Msa0903600:CDS 35.0%
AGTGTTATCTCATATCCCTT+TGG + chr6_2:810418-810437 None:intergenic 35.0%
! AACTAACTTGGTAACTGGAA+TGG + chr6_2:810542-810561 None:intergenic 35.0%
! CAGTTACCAAGTTAGTTTAC+CGG - chr6_2:810545-810564 Msa0903600:intron 35.0%
!! GATTCGTAGCTTTAATTGGT+TGG - chr6_2:810575-810594 Msa0903600:intron 35.0%
!! TCATTTTGGAAACGTTTCTG+TGG + chr6_2:810609-810628 None:intergenic 35.0%
ATCTCCATGCGACTTAAAAA+GGG + chr6_2:810829-810848 None:intergenic 35.0%
AATCTCCATGCGACTTAAAA+AGG + chr6_2:810830-810849 None:intergenic 35.0%
TGCATTGAATTTCGACCAAA+TGG + chr6_2:810915-810934 None:intergenic 35.0%
CACGATCATGAGAAGAAAAT+CGG + chr6_2:811094-811113 None:intergenic 35.0%
! AACATGATCTTGATAACAGC+AGG - chr6_2:811228-811247 Msa0903600:intron 35.0%
! ACATGATCTTGATAACAGCA+GGG - chr6_2:811229-811248 Msa0903600:intron 35.0%
TTGAAAACATGATGGTTCAC+AGG + chr6_2:811434-811453 None:intergenic 35.0%
TTGACGTAGATCAATATGAG+TGG - chr6_2:811596-811615 Msa0903600:CDS 35.0%
TAATCAAGAAAGATGCCAAC+AGG + chr6_2:811910-811929 None:intergenic 35.0%
CAGTTTCTGCGATAAAGTTA+AGG - chr6_2:812041-812060 Msa0903600:intron 35.0%
! TAAGGCACTTCAAGAATGTT+TGG + chr6_2:812092-812111 None:intergenic 35.0%
ACTTATGGGATATGCAACTT+TGG - chr6_2:812292-812311 Msa0903600:intron 35.0%
GCTTTCATAGTGTGTATGAA+AGG - chr6_2:812369-812388 Msa0903600:CDS 35.0%
TTCCAAGTTTAACAAGAGAC+TGG + chr6_2:812415-812434 None:intergenic 35.0%
! CTGATCTAGTCTCACATTTT+TGG - chr6_2:812438-812457 Msa0903600:CDS 35.0%
ACAATCCAAAAACTAGGGTT+GGG + chr6_2:812559-812578 None:intergenic 35.0%
GAAGTAACATCTTCTGTTAG+TGG + chr6_2:812621-812640 None:intergenic 35.0%
AGAATGCTTTCCAAGCAAAT+CGG + chr6_2:812871-812890 None:intergenic 35.0%
!!! TGCCTATTTGTTTTTGCAGA+CGG - chr6_2:813013-813032 Msa0903600:intron 35.0%
TTTATCACGATCATCCAAGT+TGG - chr6_2:813223-813242 Msa0903600:CDS 35.0%
! AAGATACAAGGAGAAGTACA+TGG - chr6_2:813292-813311 Msa0903600:CDS 35.0%
! AGATACAAGGAGAAGTACAT+GGG - chr6_2:813293-813312 Msa0903600:CDS 35.0%
CTGAAATGAACATTGCATTC+AGG + chr6_2:813664-813683 None:intergenic 35.0%
! ATATAGTGTGTCGACATTGT+TGG - chr6_2:813704-813723 Msa0903600:CDS 35.0%
CAGTGAAGTGATCTTCAATA+CGG + chr6_2:813871-813890 None:intergenic 35.0%
TAAATTGGTTGCGAGTTTAG+TGG - chr6_2:814305-814324 Msa0903600:intron 35.0%
TGTTTGGCAATATACAGCTT+TGG - chr6_2:814361-814380 Msa0903600:intron 35.0%
GAAAAGTCAAACTCGAAATG+TGG + chr6_2:814476-814495 None:intergenic 35.0%
ACTTGTTCGTTATTCATGTG+AGG - chr6_2:814526-814545 Msa0903600:intron 35.0%
TTGAATTGGACTCTCTGTTA+GGG + chr6_2:814724-814743 None:intergenic 35.0%
!! AGATTTTGGTAGCCTTGAAT+TGG + chr6_2:814738-814757 None:intergenic 35.0%
TCTGACAAGAATGAAGTTGA+TGG - chr6_2:814755-814774 Msa0903600:intron 35.0%
!! AATGAAGTTGATGGTAGAGT+AGG - chr6_2:814764-814783 Msa0903600:intron 35.0%
GTGAAGTTAAAAATGGTCAC+CGG - chr6_2:814786-814805 Msa0903600:intron 35.0%
! AGAACCGTTTTCTTTGTCAT+TGG + chr6_2:814825-814844 None:intergenic 35.0%
GAACTGTTTAACAAATCCAG+GGG + chr6_2:814927-814946 None:intergenic 35.0%
GAGAACTGTTTAACAAATCC+AGG + chr6_2:814929-814948 None:intergenic 35.0%
AGATAAAAGGAACTCGACAT+TGG + chr6_2:815276-815295 None:intergenic 35.0%
ATTTCCTTCTATCGTCATTG+TGG + chr6_2:815632-815651 None:intergenic 35.0%
AGGAAATACGAGTCTAGAAA+TGG - chr6_2:815645-815664 Msa0903600:intron 35.0%
GGAAATACGAGTCTAGAAAT+GGG - chr6_2:815646-815665 Msa0903600:intron 35.0%
GAAATACGAGTCTAGAAATG+GGG - chr6_2:815647-815666 Msa0903600:intron 35.0%
! ATGGAACATGATGATGTTGA+TGG - chr6_2:815819-815838 Msa0903600:intron 35.0%
TTGAAGATGTGAAGGATTCA+AGG - chr6_2:815985-816004 Msa0903600:CDS 35.0%
TGAAGATGTGAAGGATTCAA+GGG - chr6_2:815986-816005 Msa0903600:CDS 35.0%
!!! AAGGATTCAAGGGTGTTTTA+CGG - chr6_2:815996-816015 Msa0903600:CDS 35.0%
CTTGCCAGATTCTTTATGAA+AGG - chr6_2:816134-816153 Msa0903600:CDS 35.0%
!! GCATTGTATAATTTGCTCGA+TGG - chr6_2:816370-816389 Msa0903600:CDS 35.0%
ATCTTCAAACTTGGCATTCT+CGG + chr6_2:816401-816420 None:intergenic 35.0%
TCGACATTCATCTTCAAACT+TGG + chr6_2:816410-816429 None:intergenic 35.0%
ATGTGAATAGCACATAAGAC+TGG + chr6_2:816447-816466 None:intergenic 35.0%
! GTCTTATGTGCTATTCACAT+TGG - chr6_2:816447-816466 Msa0903600:CDS 35.0%
TTCATGAGGAGAACATATAC+CGG - chr6_2:816706-816725 Msa0903600:intron 35.0%
!! ATATACCGGTTTCAATCTGT+AGG - chr6_2:816720-816739 Msa0903600:intron 35.0%
AAGTAGAAAACAAATGCTCC+AGG + chr6_2:816756-816775 None:intergenic 35.0%
CTCAGAAACAAACCGAAATA+TGG - chr6_2:817164-817183 Msa0903600:CDS 35.0%
CAGAAACAAACCGAAATATG+GGG - chr6_2:817166-817185 Msa0903600:CDS 35.0%
TCATCTAAGTCCCCATATTT+CGG + chr6_2:817179-817198 None:intergenic 35.0%
TTCTGCAATTTGTGCTGTAA+TGG - chr6_2:817202-817221 Msa0903600:CDS 35.0%
! CTTGTGATTTTCCATTTTGC+AGG - chr6_2:817305-817324 Msa0903600:intron 35.0%
CAAGTTTCCAGACTAAACAA+CGG + chr6_2:817562-817581 None:intergenic 35.0%
!! AAGCTTTCGGTTGTTTTCAT+TGG + chr6_2:817777-817796 None:intergenic 35.0%
!!! ATTTTTTCTTCCGACCAAGA+AGG - chr6_2:817998-818017 Msa0903600:intron 35.0%
!! GATGTACTTGATGATGATGA+TGG + chr6_2:818036-818055 None:intergenic 35.0%
TGAATTTACAGTTTAGGTGG+AGG + chr6_2:818112-818131 None:intergenic 35.0%
CCATGAATTTACAGTTTAGG+TGG + chr6_2:818115-818134 None:intergenic 35.0%
CCACCTAAACTGTAAATTCA+TGG - chr6_2:818112-818131 Msa0903600:intron 35.0%
TTCATACAAGAGTCTTGATG+TGG - chr6_2:818163-818182 Msa0903600:five_prime_UTR 35.0%
CATATGAAAAAGTGAAGGAG+GGG - chr6_2:818242-818261 Msa0903600:five_prime_UTR 35.0%
AAGGAGGGGAATATTCATAT+AGG - chr6_2:818256-818275 Msa0903600:five_prime_UTR 35.0%
ATGTGTGTGTAATCTGTATG+AGG - chr6_2:818280-818299 Msa0903600:five_prime_UTR 35.0%
ACCACATAACCTTCTTAGAA+GGG + chr6_2:818425-818444 None:intergenic 35.0%
AACCACATAACCTTCTTAGA+AGG + chr6_2:818426-818445 None:intergenic 35.0%
! GAGAGAAAGAGAGAGAGTTT+TGG + chr6_2:808943-808962 None:intergenic 40.0%
GATGACCCAGAAAGTGAAAA+GGG + chr6_2:809174-809193 None:intergenic 40.0%
AGATGACCCAGAAAGTGAAA+AGG + chr6_2:809175-809194 None:intergenic 40.0%
TCTCAATTCAAACGACCCTA+TGG - chr6_2:809365-809384 Msa0903600:intron 40.0%
ACCGCAAGTGAGATAGATAT+AGG + chr6_2:809730-809749 None:intergenic 40.0%
TCCTTGTGTGCATGTATTTG+TGG - chr6_2:809901-809920 Msa0903600:intron 40.0%
TCCACAAATACATGCACACA+AGG + chr6_2:809905-809924 None:intergenic 40.0%
GGAAGTGAAAGACATGTTTC+AGG - chr6_2:810144-810163 Msa0903600:intron 40.0%
CGTTGTGCCTAAATAATCAG+GGG - chr6_2:810274-810293 Msa0903600:intron 40.0%
TTATCTCATATCCCTTTGGC+AGG + chr6_2:810414-810433 None:intergenic 40.0%
GATAACACTTGATGAGGATG+AGG - chr6_2:810429-810448 Msa0903600:CDS 40.0%
! AATTCAACCGTTTTCTTCGG+AGG + chr6_2:810463-810482 None:intergenic 40.0%
! CGGTAAACTAACTTGGTAAC+TGG + chr6_2:810547-810566 None:intergenic 40.0%
CTCACTATAAACCTCAGTGA+TGG + chr6_2:810691-810710 None:intergenic 40.0%
CATCACTGAGGTTTATAGTG+AGG - chr6_2:810689-810708 Msa0903600:CDS 40.0%
!! GAAGGTGCTGAAGAATTATC+TGG + chr6_2:810879-810898 None:intergenic 40.0%
! GTTTTGTCATCATCCAGATC+AGG + chr6_2:811134-811153 None:intergenic 40.0%
GCTGCTCATGATGATAAAGA+TGG - chr6_2:811317-811336 Msa0903600:CDS 40.0%
TGCCAGTCTCTTGTTAAACT+TGG - chr6_2:812410-812429 Msa0903600:CDS 40.0%
!! AAGTTCCCAACCCTAGTTTT+TGG - chr6_2:812551-812570 Msa0903600:CDS 40.0%
GACAATCCAAAAACTAGGGT+TGG + chr6_2:812560-812579 None:intergenic 40.0%
GAAGGTTATTCAAACATCCC+AGG + chr6_2:812596-812615 None:intergenic 40.0%
TGGAGTCAATAGAACTCACA+AGG + chr6_2:812809-812828 None:intergenic 40.0%
!!! GCCTATTTGTTTTTGCAGAC+GGG - chr6_2:813014-813033 Msa0903600:intron 40.0%
ACCCGTCTGCAAAAACAAAT+AGG + chr6_2:813018-813037 None:intergenic 40.0%
! TTTTACTCATGACACCAGCA+AGG + chr6_2:813042-813061 None:intergenic 40.0%
GCTAAGGTCAAGTTCTTGAA+TGG + chr6_2:813324-813343 None:intergenic 40.0%
! CAAGAACACAAAAGGTGTGA+AGG + chr6_2:813458-813477 None:intergenic 40.0%
GGATACTGCAAGAACACAAA+AGG + chr6_2:813466-813485 None:intergenic 40.0%
!! GCAAGTACTGAATGATCACT+GGG - chr6_2:813522-813541 Msa0903600:CDS 40.0%
ACTCTTTCAAACATATGCGC+AGG - chr6_2:813572-813591 Msa0903600:intron 40.0%
TGTTCAGATGTGAAGATGAC+AGG - chr6_2:813614-813633 Msa0903600:intron 40.0%
TCGACATTGTTGGCATTTAG+AGG - chr6_2:813714-813733 Msa0903600:CDS 40.0%
TTTCTGATGTAGGTTTGAGC+TGG - chr6_2:813751-813770 Msa0903600:CDS 40.0%
CGTATTGAAGATCACTTCAC+TGG - chr6_2:813869-813888 Msa0903600:intron 40.0%
! TGTCTAAGACATCAAGACCA+TGG + chr6_2:814042-814061 None:intergenic 40.0%
TCGATTGAAGCAGAAACAAG+AGG - chr6_2:814105-814124 Msa0903600:intron 40.0%
AGAAACAAGAGGAGTGGAAT+AGG - chr6_2:814116-814135 Msa0903600:intron 40.0%
TAAAGAGAAGCAGCAGAAAG+AGG - chr6_2:814403-814422 Msa0903600:CDS 40.0%
AACTCGAAATGTGGAATGAG+AGG + chr6_2:814467-814486 None:intergenic 40.0%
TTCTGATGCTGAAATTCACG+AGG - chr6_2:814493-814512 Msa0903600:intron 40.0%
CTTGAATTGGACTCTCTGTT+AGG + chr6_2:814725-814744 None:intergenic 40.0%
CTAACAGAGAGTCCAATTCA+AGG - chr6_2:814723-814742 Msa0903600:intron 40.0%
GCTGCCAATGACAAAGAAAA+CGG - chr6_2:814818-814837 Msa0903600:intron 40.0%
GACAAAGAAAACGGTTCTCT+TGG - chr6_2:814827-814846 Msa0903600:intron 40.0%
AAAGAAAACGGTTCTCTTGG+TGG - chr6_2:814830-814849 Msa0903600:intron 40.0%
TCTGCATCTGTCACAATTAG+AGG - chr6_2:814974-814993 Msa0903600:intron 40.0%
ACTATGTTGTATACGGACCT+GGG + chr6_2:815021-815040 None:intergenic 40.0%
AACTATGTTGTATACGGACC+TGG + chr6_2:815022-815041 None:intergenic 40.0%
ATAGAGACATCAGCATCAGT+AGG + chr6_2:815184-815203 None:intergenic 40.0%
! ACCAAAGGTACATTAGCACT+CGG + chr6_2:815229-815248 None:intergenic 40.0%
AACTCGACATTGGACATAGA+TGG + chr6_2:815266-815285 None:intergenic 40.0%
AAGGCTATGTTTGGGTCAAA+CGG + chr6_2:815358-815377 None:intergenic 40.0%
CTTCGACTAAGGCTATGTTT+GGG + chr6_2:815366-815385 None:intergenic 40.0%
! CAAACATAGCCTTAGTCGAA+GGG - chr6_2:815365-815384 Msa0903600:intron 40.0%
GAGGATAACTTTGTTGCCTA+TGG - chr6_2:815585-815604 Msa0903600:intron 40.0%
CTGTGCATTTGAATCTCCAT+AGG + chr6_2:815604-815623 None:intergenic 40.0%
CAAACCACAATGACGATAGA+AGG - chr6_2:815625-815644 Msa0903600:intron 40.0%
!! AGCGAAAATGTTTCTGAAGC+TGG - chr6_2:815729-815748 Msa0903600:intron 40.0%
AGATCATGAGGAGGAAGATA+TGG - chr6_2:815800-815819 Msa0903600:intron 40.0%
CATCTTTACCGTTATCAGAG+AGG - chr6_2:815910-815929 Msa0903600:intron 40.0%
GACAGAAACCTCTCTGATAA+CGG + chr6_2:815921-815940 None:intergenic 40.0%
!! CAACAAGCGCTGAAATGAAA+TGG - chr6_2:816179-816198 Msa0903600:CDS 40.0%
GATGAATGTCGAGCAATTCT+TGG - chr6_2:816418-816437 Msa0903600:CDS 40.0%
TATGAAAAGTCTCGGAAACC+TGG - chr6_2:816639-816658 Msa0903600:intron 40.0%
ATGAAAAGTCTCGGAAACCT+GGG - chr6_2:816640-816659 Msa0903600:intron 40.0%
TGCACATGTTATCCTTCATG+AGG - chr6_2:816692-816711 Msa0903600:intron 40.0%
GGTATATGTTCTCCTCATGA+AGG + chr6_2:816707-816726 None:intergenic 40.0%
AAGGACCTACAGATTGAAAC+CGG + chr6_2:816728-816747 None:intergenic 40.0%
ACAAATGCTCCAGGTTACAA+AGG + chr6_2:816747-816766 None:intergenic 40.0%
CATTCATATTGTCCATGAGC+TGG + chr6_2:816875-816894 None:intergenic 40.0%
!! ACTGGAAAGGTGCATCTTTT+AGG - chr6_2:817001-817020 Msa0903600:intron 40.0%
!! CTGGAAAGGTGCATCTTTTA+GGG - chr6_2:817002-817021 Msa0903600:intron 40.0%
GATATCTTGCAACTCATCCA+AGG - chr6_2:817259-817278 Msa0903600:CDS 40.0%
! ATGTGTCATTATGAACCCTC+TGG - chr6_2:817622-817641 Msa0903600:intron 40.0%
! TTCGTCTTTTCCTTCTTGGT+CGG + chr6_2:818011-818030 None:intergenic 40.0%
CATCAAGTACATCAGCTTCT+CGG - chr6_2:818043-818062 Msa0903600:intron 40.0%
GGAAAGATTCCGCAAATTGA+TGG - chr6_2:818083-818102 Msa0903600:intron 40.0%
! TTGCTTCAACCCTTCTAAGA+AGG - chr6_2:818413-818432 Msa0903600:five_prime_UTR 40.0%
! ACCCTTCTAAGAAGGTTATG+TGG - chr6_2:818421-818440 Msa0903600:five_prime_UTR 40.0%
! TTTGGTGTGAGAGAAAACGG+TGG + chr6_2:808925-808944 None:intergenic 45.0%
TCACCACGTGATGAACCATA+GGG + chr6_2:809383-809402 None:intergenic 45.0%
ATCACCACGTGATGAACCAT+AGG + chr6_2:809384-809403 None:intergenic 45.0%
!! ACACTACTGGTGTCATAGCA+AGG - chr6_2:810335-810354 Msa0903600:CDS 45.0%
!! CACTACTGGTGTCATAGCAA+GGG - chr6_2:810336-810355 Msa0903600:CDS 45.0%
!! TGGTGTCATAGCAAGGGTTA+AGG - chr6_2:810342-810361 Msa0903600:CDS 45.0%
!!! GCTACCCTTTTTAAGTCGCA+TGG - chr6_2:810822-810841 Msa0903600:CDS 45.0%
GCGGCAAATGCAAGTAGATA+AGG - chr6_2:810971-810990 Msa0903600:intron 45.0%
TGAACTTTCACAAGGAGCAG+AGG - chr6_2:811159-811178 Msa0903600:intron 45.0%
GAATGATGCAGTCCCATGTT+TGG - chr6_2:811803-811822 Msa0903600:CDS 45.0%
GTTGCTCCCTTTAGATCTCT+AGG - chr6_2:812197-812216 Msa0903600:intron 45.0%
!! TTGTCATTCTGGTTTGTGCC+TGG - chr6_2:812575-812594 Msa0903600:CDS 45.0%
!! TGTCATTCTGGTTTGTGCCT+GGG - chr6_2:812576-812595 Msa0903600:CDS 45.0%
CATCTTCTGTTAGTGGCTGA+AGG + chr6_2:812614-812633 None:intergenic 45.0%
!! TTTCAGGTGACCGATTTGCT+TGG - chr6_2:812858-812877 Msa0903600:CDS 45.0%
ATAGGCACAAGAAAACCCCA+AGG + chr6_2:813000-813019 None:intergenic 45.0%
AAATGACCATCAGCAGCAAG+TGG + chr6_2:813206-813225 None:intergenic 45.0%
! ATCACGATCATCCAAGTTGG+AGG - chr6_2:813226-813245 Msa0903600:CDS 45.0%
ATGTTCTCTGTCCTCCAACT+TGG + chr6_2:813240-813259 None:intergenic 45.0%
AGTTGGAGGACAGAGAACAT+AGG - chr6_2:813240-813259 Msa0903600:CDS 45.0%
AACAACGTTTGCAGTCGCTA+AGG + chr6_2:813340-813359 None:intergenic 45.0%
TGAAAGTTACGTACATCGGC+CGG + chr6_2:813383-813402 None:intergenic 45.0%
!! CGCAAGTACTGAATGATCAC+TGG - chr6_2:813521-813540 Msa0903600:CDS 45.0%
GAAAGAGTAATCCTCGCTTC+CGG + chr6_2:813560-813579 None:intergenic 45.0%
TTACAGGCAGAGCATGAGTT+GGG + chr6_2:814078-814097 None:intergenic 45.0%
ATTACAGGCAGAGCATGAGT+TGG + chr6_2:814079-814098 None:intergenic 45.0%
TGAAGCAGAAACAAGAGGAG+TGG - chr6_2:814110-814129 Msa0903600:intron 45.0%
ATCGTTCAGACTATTGCTGC+AGG - chr6_2:814431-814450 Msa0903600:CDS 45.0%
TGGGAAGTTACACCAAGCAT+CGG + chr6_2:814614-814633 None:intergenic 45.0%
AACTTCCCAATCGCATGAGT+CGG - chr6_2:814625-814644 Msa0903600:intron 45.0%
AGTTCTGTTGCACCTAACGT+AGG - chr6_2:814686-814705 Msa0903600:intron 45.0%
CTATGTTGTATACGGACCTG+GGG + chr6_2:815020-815039 None:intergenic 45.0%
AGACATCAGCATCAGTAGGT+CGG + chr6_2:815180-815199 None:intergenic 45.0%
TACATTAGCACTCGGAGACT+TGG + chr6_2:815221-815240 None:intergenic 45.0%
TCCGAGTGCTAATGTACCTT+TGG - chr6_2:815225-815244 Msa0903600:CDS 45.0%
GAGTGCTAATGTACCTTTGG+TGG - chr6_2:815228-815247 Msa0903600:CDS 45.0%
TGCTAATGTACCTTTGGTGG+AGG - chr6_2:815231-815250 Msa0903600:CDS 45.0%
GAAACTCATACCTCCACCAA+AGG + chr6_2:815244-815263 None:intergenic 45.0%
CCTTCGACTAAGGCTATGTT+TGG + chr6_2:815367-815386 None:intergenic 45.0%
! CCAAACATAGCCTTAGTCGA+AGG - chr6_2:815364-815383 Msa0903600:intron 45.0%
!! TGTCGGCTTATCTCTGTCTT+AGG - chr6_2:815422-815441 Msa0903600:intron 45.0%
! GTCGGCTTATCTCTGTCTTA+GGG - chr6_2:815423-815442 Msa0903600:intron 45.0%
GTTCTCAACTAACACGCCAT+TGG + chr6_2:815478-815497 None:intergenic 45.0%
ATACGAGTCTAGAAATGGGG+AGG - chr6_2:815650-815669 Msa0903600:intron 45.0%
TGTGATGCTGATGCACAAAC+TGG - chr6_2:815876-815895 Msa0903600:intron 45.0%
GATGCACAAACTGGAGTAGA+TGG - chr6_2:815885-815904 Msa0903600:intron 45.0%
GCAGATACATGCTTTGTGAG+AGG + chr6_2:815954-815973 None:intergenic 45.0%
GTTCTACAGATCCTTACGCA+AGG - chr6_2:816218-816237 Msa0903600:CDS 45.0%
TACAGGATGTACCTTGCGTA+AGG + chr6_2:816232-816251 None:intergenic 45.0%
TTCAAACTTGGCATTCTCGG+CGG + chr6_2:816398-816417 None:intergenic 45.0%
! ACAGTTTGAAGCTGCAGTGT+AGG + chr6_2:816576-816595 None:intergenic 45.0%
TCAAACTGTTGCAACCGATG+AGG - chr6_2:816587-816606 Msa0903600:intron 45.0%
AAGCTTAGCGTCTTCCTCAT+CGG + chr6_2:816604-816623 None:intergenic 45.0%
TCTGTAGGTCCTTTGTAACC+TGG - chr6_2:816735-816754 Msa0903600:intron 45.0%
AACAGCAACAGCAGCAATCT+CGG + chr6_2:816904-816923 None:intergenic 45.0%
CTTTCCAGTAAAATGCCGTG+AGG + chr6_2:816990-817009 None:intergenic 45.0%
! CTCACGGCATTTTACTGGAA+AGG - chr6_2:816988-817007 Msa0903600:intron 45.0%
TGTGCAACCGTTGTTTAGTC+TGG - chr6_2:817552-817571 Msa0903600:intron 45.0%
! CTCAGGTGCTACAAGAACTA+CGG + chr6_2:817597-817616 None:intergenic 45.0%
! GGTGTTCGTCTTTTCCTTCT+TGG + chr6_2:818015-818034 None:intergenic 45.0%
TCTTGATGTGGCAACAACCT+AGG - chr6_2:818175-818194 Msa0903600:five_prime_UTR 45.0%
!!! ATCTTAATATTATTTATTTT+TGG - chr6_2:810297-810316 Msa0903600:intron 5.0%
!!! ATTTTTTTGTTTAAAAAAAT+TGG - chr6_2:810760-810779 Msa0903600:intron 5.0%
! CAAGATGGGTTTGATCGGAG+AGG + chr6_2:809083-809102 None:intergenic 50.0%
TGAAGATATGGTCAAGGCCC+CGG - chr6_2:810025-810044 Msa0903600:intron 50.0%
GTTTCCAGGACTGACACTAC+TGG - chr6_2:810322-810341 Msa0903600:CDS 50.0%
CGAAGCTCCTCCGAAGAAAA+CGG - chr6_2:810453-810472 Msa0903600:CDS 50.0%
AGAGCACAAGACCATCACTG+AGG - chr6_2:810677-810696 Msa0903600:CDS 50.0%
AATGGAGCATGCTGTGTGGA+AGG + chr6_2:810897-810916 None:intergenic 50.0%
TCCACACAGCATGCTCCATT+TGG - chr6_2:810897-810916 Msa0903600:CDS 50.0%
ACCAAATGGAGCATGCTGTG+TGG + chr6_2:810901-810920 None:intergenic 50.0%
TACTTGCATTTGCCGCATCC+CGG + chr6_2:810967-810986 None:intergenic 50.0%
!! GAGTGTTGAACGTCCTGATC+TGG - chr6_2:811118-811137 Msa0903600:CDS 50.0%
! TTAGAGCCACTTGCTGCTGA+TGG - chr6_2:813197-813216 Msa0903600:CDS 50.0%
CAGAGAACATAGGCGTGAGA+CGG - chr6_2:813250-813269 Msa0903600:CDS 50.0%
GACGGATGGAGGTAAAGAGA+AGG - chr6_2:813268-813287 Msa0903600:CDS 50.0%
! CGCTGACTAGCAGTAGGAAT+TGG + chr6_2:813487-813506 None:intergenic 50.0%
! TCAGATCGCTGACTAGCAGT+AGG + chr6_2:813493-813512 None:intergenic 50.0%
CACTGGGTATCTGTGACTTC+CGG - chr6_2:813538-813557 Msa0903600:intron 50.0%
ACCTTCTTGGAACCGATGCT+TGG - chr6_2:814599-814618 Msa0903600:intron 50.0%
!! ACCAAGCATCGGTTCCAAGA+AGG + chr6_2:814603-814622 None:intergenic 50.0%
CCTTTCCGACTCATGCGATT+GGG + chr6_2:814633-814652 None:intergenic 50.0%
CCAATCGCATGAGTCGGAAA+GGG - chr6_2:814631-814650 Msa0903600:intron 50.0%
TCTGTTGCACCTAACGTAGG+AGG - chr6_2:814689-814708 Msa0903600:intron 50.0%
CTTCCATCACCTCCTACGTT+AGG + chr6_2:814701-814720 None:intergenic 50.0%
CATTGGCAGCTACACTAGTC+CGG + chr6_2:814808-814827 None:intergenic 50.0%
GAAAGCAGTGATAAAGCCCC+TGG - chr6_2:814908-814927 Msa0903600:intron 50.0%
TCTCGCTGCTTGTTCATCAG+AGG + chr6_2:814951-814970 None:intergenic 50.0%
GACATCAGCATCAGTAGGTC+GGG + chr6_2:815179-815198 None:intergenic 50.0%
TCCTCCTCAGAGTCAGCATT+CGG + chr6_2:815570-815589 None:intergenic 50.0%
TCATTATCACCTCCAGCCTC+TGG + chr6_2:815687-815706 None:intergenic 50.0%
GAAGCTGGTGAAGATGTGTC+AGG - chr6_2:815744-815763 Msa0903600:intron 50.0%
TTCCTCCTCATGATCTTCCC+GGG + chr6_2:815796-815815 None:intergenic 50.0%
CTTCCTCCTCATGATCTTCC+CGG + chr6_2:815797-815816 None:intergenic 50.0%
GATGGTAAAGCCGAGAGTGA+AGG - chr6_2:815837-815856 Msa0903600:intron 50.0%
CTCTGCTTCACCTTCACTCT+CGG + chr6_2:815850-815869 None:intergenic 50.0%
GAGAGTGAAGGTGAAGCAGA+GGG - chr6_2:815849-815868 Msa0903600:intron 50.0%
AGAGTGAAGGTGAAGCAGAG+GGG - chr6_2:815850-815869 Msa0903600:intron 50.0%
TGCAGTCGTCTAGTCCTTCT+CGG - chr6_2:816841-816860 Msa0903600:intron 50.0%
ACAGCAACAGCAGCAATCTC+GGG + chr6_2:816903-816922 None:intergenic 50.0%
! GATTTTCTGTCTGTCCTCCC+TGG - chr6_2:816954-816973 Msa0903600:intron 50.0%
! AGGTGCTACAAGAACTACGG+TGG + chr6_2:817594-817613 None:intergenic 50.0%
TGGAGGACGCCATCAATTTG+CGG + chr6_2:818095-818114 None:intergenic 50.0%
CGACCCTATGGTTCATCACG+TGG - chr6_2:809377-809396 Msa0903600:intron 55.0%
GAGTTAACGGAGGAGGAGGT+GGG - chr6_2:810068-810087 Msa0903600:CDS 55.0%
AGTTAACGGAGGAGGAGGTG+GGG - chr6_2:810069-810088 Msa0903600:CDS 55.0%
GACACCAGTAGTGTCAGTCC+TGG + chr6_2:810329-810348 None:intergenic 55.0%
CAATGCAGCGCCTCAATGAG+CGG - chr6_2:810928-810947 Msa0903600:CDS 55.0%
AATGCAGCGCCTCAATGAGC+GGG - chr6_2:810929-810948 Msa0903600:CDS 55.0%
CCATAGAACCCCGCTCATTG+AGG + chr6_2:810941-810960 None:intergenic 55.0%
CCTCAATGAGCGGGGTTCTA+TGG - chr6_2:810938-810957 Msa0903600:CDS 55.0%
ACTTGCATTTGCCGCATCCC+GGG + chr6_2:810966-810985 None:intergenic 55.0%
AGCGTGAGAGCAGGGATAGA+AGG - chr6_2:811183-811202 Msa0903600:intron 55.0%
GCGTGAGAGCAGGGATAGAA+GGG - chr6_2:811184-811203 Msa0903600:intron 55.0%
! TTTGCAGACGGGTTCCTTGC+TGG - chr6_2:813025-813044 Msa0903600:intron 55.0%
GAACATAGGCGTGAGACGGA+TGG - chr6_2:813254-813273 Msa0903600:CDS 55.0%
!! TCCGAGCTACCGACTTCTAC+CGG - chr6_2:813361-813380 Msa0903600:intron 55.0%
GTACATCGGCCGGTAGAAGT+CGG + chr6_2:813373-813392 None:intergenic 55.0%
GCTAGTCAGCGATCTGAGCT+TGG - chr6_2:813496-813515 Msa0903600:CDS 55.0%
ATCTGTGACTTCCGGAAGCG+AGG - chr6_2:813546-813565 Msa0903600:intron 55.0%
CTCGTCAGCTCGTTTAGCAG+CGG + chr6_2:813801-813820 None:intergenic 55.0%
!! GAGGCTCTGGAGTACCTTCT+TGG - chr6_2:814586-814605 Msa0903600:intron 55.0%
CCCAATCGCATGAGTCGGAA+AGG - chr6_2:814630-814649 Msa0903600:intron 55.0%
CCCTTTCCGACTCATGCGAT+TGG + chr6_2:814634-814653 None:intergenic 55.0%
GCACCTAACGTAGGAGGTGA+TGG - chr6_2:814695-814714 Msa0903600:intron 55.0%
AGCAGTGTGCATATGTCCCC+AGG - chr6_2:815001-815020 Msa0903600:intron 55.0%
!! GTCGGGTTGGAGTAAGTACG+CGG + chr6_2:815162-815181 None:intergenic 55.0%
TCAGCATCAGTAGGTCGGGT+TGG + chr6_2:815175-815194 None:intergenic 55.0%
ACTAACACGCCATTGGCCAC+TGG + chr6_2:815471-815490 None:intergenic 55.0%
!! ATCCCCGAATGCTGACTCTG+AGG - chr6_2:815563-815582 Msa0903600:intron 55.0%
CTCCTCAGAGTCAGCATTCG+GGG + chr6_2:815568-815587 None:intergenic 55.0%
CCTCCTCAGAGTCAGCATTC+GGG + chr6_2:815569-815588 None:intergenic 55.0%
TATCACCTCCAGCCTCTGGA+CGG + chr6_2:815683-815702 None:intergenic 55.0%
GTGTCAGGAAGTGAGTCTGC+TGG - chr6_2:815759-815778 Msa0903600:intron 55.0%
! CTGCTGGTGATGAATGCTCC+CGG - chr6_2:815775-815794 Msa0903600:intron 55.0%
! TGCTGGTGATGAATGCTCCC+GGG - chr6_2:815776-815795 Msa0903600:intron 55.0%
ATGCTCCCGGGAAGATCATG+AGG - chr6_2:815788-815807 Msa0903600:intron 55.0%
CGAGAGTGAAGGTGAAGCAG+AGG - chr6_2:815848-815867 Msa0903600:intron 55.0%
GTCTGTCCTCCCTGGCAAAA+AGG - chr6_2:816962-816981 Msa0903600:intron 55.0%
! CGTGAGGCTCCTTTTTGCCA+GGG + chr6_2:816974-816993 None:intergenic 55.0%
CCTGGCAAAAAGGAGCCTCA+CGG - chr6_2:816972-816991 Msa0903600:intron 55.0%
! GGAGCCTCACGGCATTTTAC+TGG - chr6_2:816983-817002 Msa0903600:intron 55.0%
ATCAGCTTCTCGGTCTCGCA+GGG - chr6_2:818053-818072 Msa0903600:intron 55.0%
AGATATGGTCAAGGCCCCGG+AGG - chr6_2:810028-810047 Msa0903600:intron 60.0%
!! GGTGGCGGAGGTGGAGTTAA+CGG - chr6_2:810055-810074 Msa0903600:CDS 60.0%
GGAGGTGGAGTTAACGGAGG+AGG - chr6_2:810061-810080 Msa0903600:CDS 60.0%
GGTGGAGTTAACGGAGGAGG+AGG - chr6_2:810064-810083 Msa0903600:CDS 60.0%
GGAGTTAACGGAGGAGGAGG+TGG - chr6_2:810067-810086 Msa0903600:CDS 60.0%
GTTAACGGAGGAGGAGGTGG+GGG - chr6_2:810070-810089 Msa0903600:CDS 60.0%
ATGCAGCGCCTCAATGAGCG+GGG - chr6_2:810930-810949 Msa0903600:CDS 60.0%
GTTCTATGGCACCCGGGATG+CGG - chr6_2:810952-810971 Msa0903600:intron 60.0%
! AGCAGAGGAAGCGTGAGAGC+AGG - chr6_2:811174-811193 Msa0903600:intron 60.0%
! GCAGAGGAAGCGTGAGAGCA+GGG - chr6_2:811175-811194 Msa0903600:intron 60.0%
GGAGAAGTTGAGCAGCGCTG+AGG - chr6_2:812062-812081 Msa0903600:intron 60.0%
CATAGGCGTGAGACGGATGG+AGG - chr6_2:813257-813276 Msa0903600:CDS 60.0%
GCCGGTAGAAGTCGGTAGCT+CGG + chr6_2:813365-813384 None:intergenic 60.0%
GCATGAGTCGGAAAGGGCTG+AGG - chr6_2:814637-814656 Msa0903600:intron 60.0%
AGTCGGAAAGGGCTGAGGAC+AGG - chr6_2:814642-814661 Msa0903600:intron 60.0%
AGGGCTGAGGACAGGAAAGC+AGG - chr6_2:814650-814669 Msa0903600:intron 60.0%
! CACTGGTACTGGAGGTGGAG+CGG + chr6_2:815454-815473 None:intergenic 60.0%
! TTGGCCACTGGTACTGGAGG+TGG + chr6_2:815459-815478 None:intergenic 60.0%
! CCATTGGCCACTGGTACTGG+AGG + chr6_2:815462-815481 None:intergenic 60.0%
CCTCCAGTACCAGTGGCCAA+TGG - chr6_2:815459-815478 Msa0903600:intron 60.0%
ACGCCATTGGCCACTGGTAC+TGG + chr6_2:815465-815484 None:intergenic 60.0%
!! CCCGAATGCTGACTCTGAGG+AGG - chr6_2:815566-815585 Msa0903600:intron 60.0%
CTCCCGGGAAGATCATGAGG+AGG - chr6_2:815791-815810 Msa0903600:intron 60.0%
AGCTGGATCGAGAGCCGAGA+AGG + chr6_2:816858-816877 None:intergenic 60.0%
TCGGCTCTCGATCCAGCTCA+TGG - chr6_2:816860-816879 Msa0903600:intron 60.0%
! GAGGCTCCTTTTTGCCAGGG+AGG + chr6_2:816971-816990 None:intergenic 60.0%
! CCGTGAGGCTCCTTTTTGCC+AGG + chr6_2:816975-816994 None:intergenic 60.0%
CATCAGCTTCTCGGTCTCGC+AGG - chr6_2:818052-818071 Msa0903600:intron 60.0%
TCGGTCTCGCAGGGAAAGAG+AGG - chr6_2:818062-818081 Msa0903600:intron 60.0%
TATGGTCAAGGCCCCGGAGG+TGG - chr6_2:810031-810050 Msa0903600:intron 65.0%
GGCGGAGGTGGAGTTAACGG+AGG - chr6_2:810058-810077 Msa0903600:CDS 65.0%
GAGCGGGGTTCTATGGCACC+CGG - chr6_2:810945-810964 Msa0903600:intron 65.0%
AGCGGGGTTCTATGGCACCC+GGG - chr6_2:810946-810965 Msa0903600:intron 65.0%
CGCTCCACCTCCAGTACCAG+TGG - chr6_2:815452-815471 Msa0903600:intron 65.0%
ACCTCCGCCACCACCACCTC+CGG + chr6_2:810047-810066 None:intergenic 70.0%
! GGAGGACGAGCACCGTCCAG+AGG - chr6_2:815668-815687 Msa0903600:intron 70.0%
! GACGAGCACCGTCCAGAGGC+TGG - chr6_2:815672-815691 Msa0903600:intron 70.0%
! GAGCACCGTCCAGAGGCTGG+AGG - chr6_2:815675-815694 Msa0903600:intron 70.0%
GGTCAAGGCCCCGGAGGTGG+TGG - chr6_2:810034-810053 Msa0903600:intron 75.0%
! CAAGGCCCCGGAGGTGGTGG+TGG - chr6_2:810037-810056 Msa0903600:intron 75.0%
CTCCGCCACCACCACCTCCG+GGG + chr6_2:810045-810064 None:intergenic 75.0%
CCTCCGCCACCACCACCTCC+GGG + chr6_2:810046-810065 None:intergenic 75.0%
!! GGAGGTGGTGGTGGCGGAGG+TGG - chr6_2:810046-810065 Msa0903600:CDS 75.0%
!!! GGCCCCGGAGGTGGTGGTGG+CGG - chr6_2:810040-810059 Msa0903600:CDS 80.0%
!!! CCCGGAGGTGGTGGTGGCGG+AGG - chr6_2:810043-810062 Msa0903600:CDS 80.0%
Chromosome Type Strat End Strand Name
chr6_2 gene 808831 818488 808831 ID=Msa0903600;Name=Msa0903600
chr6_2 mRNA 808831 818488 808831 ID=Msa0903600-mRNA-1;Parent=Msa0903600;Name=Msa0903600-mRNA-1;_AED=0.11;_eAED=0.11;_QI=329|0.9|0.90|1|0.9|0.90|21|369|1287
chr6_2 exon 808831 809346 808831 ID=Msa0903600-mRNA-1:exon:383;Parent=Msa0903600-mRNA-1
chr6_2 exon 810039 810150 810039 ID=Msa0903600-mRNA-1:exon:382;Parent=Msa0903600-mRNA-1
chr6_2 exon 810310 810473 810310 ID=Msa0903600-mRNA-1:exon:381;Parent=Msa0903600-mRNA-1
chr6_2 exon 810582 810734 810582 ID=Msa0903600-mRNA-1:exon:380;Parent=Msa0903600-mRNA-1
chr6_2 exon 810821 810959 810821 ID=Msa0903600-mRNA-1:exon:379;Parent=Msa0903600-mRNA-1
chr6_2 exon 811080 811177 811080 ID=Msa0903600-mRNA-1:exon:378;Parent=Msa0903600-mRNA-1
chr6_2 exon 811264 811875 811264 ID=Msa0903600-mRNA-1:exon:377;Parent=Msa0903600-mRNA-1
chr6_2 exon 812067 812161 812067 ID=Msa0903600-mRNA-1:exon:376;Parent=Msa0903600-mRNA-1
chr6_2 exon 812297 812941 812297 ID=Msa0903600-mRNA-1:exon:375;Parent=Msa0903600-mRNA-1
chr6_2 exon 813063 813317 813063 ID=Msa0903600-mRNA-1:exon:374;Parent=Msa0903600-mRNA-1
chr6_2 exon 813429 813556 813429 ID=Msa0903600-mRNA-1:exon:373;Parent=Msa0903600-mRNA-1
chr6_2 exon 813684 813838 813684 ID=Msa0903600-mRNA-1:exon:372;Parent=Msa0903600-mRNA-1
chr6_2 exon 813931 814118 813931 ID=Msa0903600-mRNA-1:exon:371;Parent=Msa0903600-mRNA-1
chr6_2 exon 814258 814287 814258 ID=Msa0903600-mRNA-1:exon:370;Parent=Msa0903600-mRNA-1
chr6_2 exon 814380 814455 814380 ID=Msa0903600-mRNA-1:exon:369;Parent=Msa0903600-mRNA-1
chr6_2 exon 815161 815300 815161 ID=Msa0903600-mRNA-1:exon:368;Parent=Msa0903600-mRNA-1
chr6_2 exon 815972 816245 815972 ID=Msa0903600-mRNA-1:exon:367;Parent=Msa0903600-mRNA-1
chr6_2 exon 816327 816500 816327 ID=Msa0903600-mRNA-1:exon:366;Parent=Msa0903600-mRNA-1
chr6_2 exon 817091 817289 817091 ID=Msa0903600-mRNA-1:exon:365;Parent=Msa0903600-mRNA-1
chr6_2 exon 817914 817995 817914 ID=Msa0903600-mRNA-1:exon:364;Parent=Msa0903600-mRNA-1
chr6_2 exon 818162 818488 818162 ID=Msa0903600-mRNA-1:exon:363;Parent=Msa0903600-mRNA-1
chr6_2 five_prime_UTR 818162 818488 818162 ID=Msa0903600-mRNA-1:five_prime_utr;Parent=Msa0903600-mRNA-1
chr6_2 five_prime_UTR 817994 817995 817994 ID=Msa0903600-mRNA-1:five_prime_utr;Parent=Msa0903600-mRNA-1
chr6_2 CDS 817914 817993 817914 ID=Msa0903600-mRNA-1:cds;Parent=Msa0903600-mRNA-1
chr6_2 CDS 817091 817289 817091 ID=Msa0903600-mRNA-1:cds;Parent=Msa0903600-mRNA-1
chr6_2 CDS 816327 816500 816327 ID=Msa0903600-mRNA-1:cds;Parent=Msa0903600-mRNA-1
chr6_2 CDS 815972 816245 815972 ID=Msa0903600-mRNA-1:cds;Parent=Msa0903600-mRNA-1
chr6_2 CDS 815161 815300 815161 ID=Msa0903600-mRNA-1:cds;Parent=Msa0903600-mRNA-1
chr6_2 CDS 814380 814455 814380 ID=Msa0903600-mRNA-1:cds;Parent=Msa0903600-mRNA-1
chr6_2 CDS 814258 814287 814258 ID=Msa0903600-mRNA-1:cds;Parent=Msa0903600-mRNA-1
chr6_2 CDS 813931 814118 813931 ID=Msa0903600-mRNA-1:cds;Parent=Msa0903600-mRNA-1
chr6_2 CDS 813684 813838 813684 ID=Msa0903600-mRNA-1:cds;Parent=Msa0903600-mRNA-1
chr6_2 CDS 813429 813556 813429 ID=Msa0903600-mRNA-1:cds;Parent=Msa0903600-mRNA-1
chr6_2 CDS 813063 813317 813063 ID=Msa0903600-mRNA-1:cds;Parent=Msa0903600-mRNA-1
chr6_2 CDS 812297 812941 812297 ID=Msa0903600-mRNA-1:cds;Parent=Msa0903600-mRNA-1
chr6_2 CDS 812067 812161 812067 ID=Msa0903600-mRNA-1:cds;Parent=Msa0903600-mRNA-1
chr6_2 CDS 811264 811875 811264 ID=Msa0903600-mRNA-1:cds;Parent=Msa0903600-mRNA-1
chr6_2 CDS 811080 811177 811080 ID=Msa0903600-mRNA-1:cds;Parent=Msa0903600-mRNA-1
chr6_2 CDS 810821 810959 810821 ID=Msa0903600-mRNA-1:cds;Parent=Msa0903600-mRNA-1
chr6_2 CDS 810582 810734 810582 ID=Msa0903600-mRNA-1:cds;Parent=Msa0903600-mRNA-1
chr6_2 CDS 810310 810473 810310 ID=Msa0903600-mRNA-1:cds;Parent=Msa0903600-mRNA-1
chr6_2 CDS 810039 810150 810039 ID=Msa0903600-mRNA-1:cds;Parent=Msa0903600-mRNA-1
chr6_2 CDS 809200 809346 809200 ID=Msa0903600-mRNA-1:cds;Parent=Msa0903600-mRNA-1
chr6_2 three_prime_UTR 808831 809199 808831 ID=Msa0903600-mRNA-1:three_prime_utr;Parent=Msa0903600-mRNA-1
Gene Sequence

>Msa0903600

ATGAAGAGGGCTAGAGATGATATTTACTCTGCTTCTGCTTCTCAATTCAAACGACCCTATGGTTCATCACGTGGTGATTCATATGGTCAAGGCCCCGGAGGTGGTGGTGGCGGAGGTGGAGTTAACGGAGGAGGAGGTGGGGGAGCAACTACCTCCCAAAAATTGACAACCAATGATGCTTTATCCTATTTGAAGGAAGTGAAAGACATGTTTCAGGATCAAAAAGAAAAATATGACATGTTCCTTGAGGTCATGAAAGATTTCAAGGCTCAAAAGTATGTTGCTACCCTTTTTAAGTCGCATGGAGATTTGCTCGATGAGTTCACCAGATTCTTACCAGATAATTCTTCAGCACCTTCCACACAGCATGCTCCATTTGGTCGAAATTCAATGCAGCGCCTCAATGAGCGGGGTTCTATGGCACCCGGGATGCGGCAAATGCAAGTAGATAAGCAACGATATCGGCGAGACCGATTTTCTTCTCATGATCGTGATATGAGTGTTGAACGTCCTGATCTGGATGATGACAAAACAATGATGAACTTTCACAAGGAGCAGAGGAAGCGTGAGAGCAGGGATAGAAGGGTGCGCGATCACGATGATAGAGAACATGATCTTGATAACAGCAGGGATTTGCACTCACAACGCTTTCCTGACAAAAAGAAATCTGTTAAGAAGACTGAAGCTTATGACTTTGCTGCTCATGATGATAAAGATGGAATGAAGCCAGTCATGTATAGTCAAGCAATCAGTTTCTGCGATAAAGTTAAGGAGAAGTTGAGCAGCGCTGAGGACTACCAAACATTCTTGAAGTGCCTTAATATTTTTGGCAACGGAATTATAAAAAAGAATGATTTACAAAATTTGGTGACCGATTTGCTTGGAAAGCATTCTGATCTAATGAGCGAATTCAATGATTTCTTAGAGCGTTGTGAAAATATTGACGGGTTCCTTGCTGGTGTCATGAGTAAAAAGCCACTTGCTGCTGATGGTCATTTATCACGATCATCCAAGTTGGAGGACAGAGAACATAGGCGTGAGACGGATGGAGGTAAAGAGAAGGAAAGATACAAGGAGAAGTACATGGGAAAATCCATTCAAGAACTTGACCTTAGCGACTGCAAACGTTGTTCTCCGAGCTACCGACTTCTACCGGCCGATTATCCAATTCCTACTGCTAGTCAGCGATCTGAGCTTGGTGCGCAAGTACTGAATGATCACTGGGTATCTGTGACTTCCGGAAGCGAGGATTACTCTTTCAAACATATGCGCAGGAATCAATACGAAGAAAGCTTGTTCAGATGTGAAGATGACAGGTTTGAGCTGGACATGTTATTAGAGTCTGTAAGTTCCGCTGCTAAACGAGCTGACGAGTTGTACAACAGCATTGTTGAAAATAAGATTAGTGTGGAGAGTCTAAGCCGTATTGAAGATCACTTCACTGTTCTAAATCTAAGGTGCATTGAACGCCTATATGGTGACCATGGTCTTGATGTCTTAGACATACTGCGTAAGAACCCAACTCATGCTCTGCCTGTAATATTGACTCGATTGAAGCAGAAACAAGAGGAGTGGAATAGGTGTCGTTCAGATTTCAATAAAGTTTGGGCTGACATTTATTCTAAAAATCACTACAAATCACTTGATCATCGTAGCTTCTATTTCAAGCAACAAGATTCGAAGAACTTGAGCACAAAATCTTTGGTGACTGAGATCAAAGAAATTAAAGAGAAGCAGCAGAAAGAGGATGACATCGTTCAGACTATTGCTGCAGGAGCAAAACATCCTCTCATTCCACATTTCGAGTTTGACTTTTCTGATGCTGAAATTCACGAGGACCTGTATAAACTTGTTCGTTATTCATGTGAGGAAGTATTCCAAAGTAAAGAGTTATTCAATAAAATTATGAGGCTCTGGAGTACCTTCTTGGAACCGATGCTTGGTGTAACTTCCCAATCGCATGAGTCGGAAAGGGCTGAGGACAGGAAAGCAGGACACAACGCTCGAAGTTCTGTTGCACCTAACGTAGGAGGTGATGGAAGCCCTAACAGAGAGTCCAATTCAAGGCTACCAAAATCTGACAAGAATGAAGTTGATGGTAGAGTAGGTGAAGTTAAAAATGGTCACCGGACTAGTGTAGCTGCCAATGACAAAGAAAACGGTTCTCTTGGTGGCGAGCTTGTTAGTAGAGATGATCATTTAATGGATAATAAAGGGCAGAAAAGTGTTGAAAGCAGTGATAAAGCCCCTGGATTTGTTAAACAGTTCTCCTCTGATGAACAAGCAGCGAGAAACTCTGCATCTGTCACAATTAGAGGCGAAAGCAGTGTGCATATGTCCCCAGGCCGCGTACTTACTCCAACCCGACCTACTGATGCTGATGTCTCTATTGCTGTAGTCATAGCCAAGTCTCCGAGTGCTAATGTACCTTTGGTGGAGGGCGTTGCCGCTCCACCTCCAGTACCAGTGGCCAATGGCGTGTTAGTTGAGAACAGTAAAGTTAAAAGCAATGAAGAATCTTCTGTGCCTTGCAAAGTTGAAAAAGAAGAGGGTGAGTTATCCCCGAATGCTGACTCTGAGGAGGATAACTTTGTTGCCTATGGAGATTCAAATGCACAGTCAAACCACAATGACGATAGAAGGAAATACGAGTCTAGAAATGGGGAGGACGAGCACCGTCCAGAGGCTGGAGGTGATAATGATGCAGATGCTGATGACGAAGACAGCGAAAATGTTTCTGAAGCTGGTGAAGATGTGTCAGGAAGTGAGTCTGCTGGTGATGAATGCTCCCGGGAAGATCATGAGGAGGAAGATATGGAACATGATGATGTTGATGGTAAAGCCGAGAGTGAAGGTGAAGCAGAGGGGATGTGTGATGCTGATGCACAAACTGGAGTAGATGGCTCATCTTTACCGTTATCAGAGAGGTTTCTGTCAACTGTGAAACCTCTCACAAAGCATGTATCTGCAGTTTCATTTGTTGAAGATGTGAAGGATTCAAGGGTGTTTTACGGAAATGATGATTTCTTTGTTCTCTTTAGGCTTCATCAAATTCTTTATGAAAGGATCTTATCTGCAAAAGAAAATTCAACAAGCGCTGAAATGAAATGGAAAACAAAAGATTCTAGTTCTACAGATCCTTACGCAAGATTTATGGATGCATTGTATAATTTGCTCGATGGATCCGCCGAGAATGCCAAGTTTGAAGATGAATGTCGAGCAATTCTTGGAAACCAGTCTTATGTGCTATTCACATTGGACAAGTTAATATATAAATTAATCAGACAGCTTCAAACTGTTGCAACCGATGAGGAAGACGCTAAGCTTCTCCAATTATACGAGTATGAAAAGTCTCGGAAACCTGGGAAATTAAATGATTCAGTATATCATTCAAATGCACATGTTATCCTTCATGAGGAGAACATATACCGGTTTCAATCTTCGTCTAGTCCTTCTCGGCTCTCGATCCAGCTCATGGACAATATGAATGAAAAGCCCGAGATTGCTGCTGTTGCTGTTGATCCAGATTTTTCATTTTATCTGCACAATGATTTTCTGTCTGTCCTCCCTGGCAAAAAGGAGCCTCACGGCATTTTACTGGAAAGAAACAAACCGAAATATGGGGACTTAGATGAGCTTTCTGCAATTTGTGCTGTAATGGAAGATGTCAAAGTAGTTAATGGATTGGAATGCAAGATATCTTGCAACTCATCCAAGATTTCTTATGTTCTCGACACACAAGATTTTTTCTTCCGACCAAGAAGGAAAAGACGAACACCATCATCATCATCAAGTACATCAGCTTCTCGGTCTCGCAGGGAAAGAGAGGAAAGATTCCGCAAATTGATGGCGTCCTCCACCTAA
Protein sequence

>Msa0903600

MKRARDDIYSASASQFKRPYGSSRGDSYGQGPGGGGGGGGVNGGGGGGATTSQKLTTNDALSYLKEVKDMFQDQKEKYDMFLEVMKDFKAQKYVATLFKSHGDLLDEFTRFLPDNSSAPSTQHAPFGRNSMQRLNERGSMAPGMRQMQVDKQRYRRDRFSSHDRDMSVERPDLDDDKTMMNFHKEQRKRESRDRRVRDHDDREHDLDNSRDLHSQRFPDKKKSVKKTEAYDFAAHDDKDGMKPVMYSQAISFCDKVKEKLSSAEDYQTFLKCLNIFGNGIIKKNDLQNLVTDLLGKHSDLMSEFNDFLERCENIDGFLAGVMSKKPLAADGHLSRSSKLEDREHRRETDGGKEKERYKEKYMGKSIQELDLSDCKRCSPSYRLLPADYPIPTASQRSELGAQVLNDHWVSVTSGSEDYSFKHMRRNQYEESLFRCEDDRFELDMLLESVSSAAKRADELYNSIVENKISVESLSRIEDHFTVLNLRCIERLYGDHGLDVLDILRKNPTHALPVILTRLKQKQEEWNRCRSDFNKVWADIYSKNHYKSLDHRSFYFKQQDSKNLSTKSLVTEIKEIKEKQQKEDDIVQTIAAGAKHPLIPHFEFDFSDAEIHEDLYKLVRYSCEEVFQSKELFNKIMRLWSTFLEPMLGVTSQSHESERAEDRKAGHNARSSVAPNVGGDGSPNRESNSRLPKSDKNEVDGRVGEVKNGHRTSVAANDKENGSLGGELVSRDDHLMDNKGQKSVESSDKAPGFVKQFSSDEQAARNSASVTIRGESSVHMSPGRVLTPTRPTDADVSIAVVIAKSPSANVPLVEGVAAPPPVPVANGVLVENSKVKSNEESSVPCKVEKEEGELSPNADSEEDNFVAYGDSNAQSNHNDDRRKYESRNGEDEHRPEAGGDNDADADDEDSENVSEAGEDVSGSESAGDECSREDHEEEDMEHDDVDGKAESEGEAEGMCDADAQTGVDGSSLPLSERFLSTVKPLTKHVSAVSFVEDVKDSRVFYGNDDFFVLFRLHQILYERILSAKENSTSAEMKWKTKDSSSTDPYARFMDALYNLLDGSAENAKFEDECRAILGNQSYVLFTLDKLIYKLIRQLQTVATDEEDAKLLQLYEYEKSRKPGKLNDSVYHSNAHVILHEENIYRFQSSSSPSRLSIQLMDNMNEKPEIAAVAVDPDFSFYLHNDFLSVLPGKKEPHGILLERNKPKYGDLDELSAICAVMEDVKVVNGLECKISCNSSKISYVLDTQDFFFRPRRKRRTPSSSSSTSASRSRREREERFRKLMASST*