AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0870490

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0870490 MtrunA17_Chr6g0452001 97.406 1388 27 5 51 1430 1 1387 0.0 2775
Msa0870490 MtrunA17_Chr5g0415031 50.788 1459 584 36 51 1427 1 1407 0.0 1276
Msa0870490 MtrunA17_Chr8g0364231 50.069 1456 596 32 51 1427 1 1404 0.0 1261
Msa0870490 MtrunA17_Chr6g0452021 67.273 440 85 8 99 531 33 420 0.0 553
Msa0870490 MtrunA17_Chr8g0368731 44.426 619 276 18 711 1292 26 613 9.40e-134 426
Msa0870490 MtrunA17_Chr1g0206771 43.421 152 79 1 106 257 13 157 3.59e-29 115
Msa0870490 MtrunA17_Chr1g0206771 53.623 69 32 0 109 177 95 163 1.46e-15 76.6
Msa0870490 MtrunA17_Chr1g0206781 61.905 84 32 0 101 184 3 86 1.57e-27 108
Msa0870490 MtrunA17_Chr3g0077911 40.506 158 85 4 103 257 2 153 6.84e-24 99.8
Msa0870490 MtrunA17_Chr3g0077911 58.974 78 31 1 102 178 83 160 2.03e-19 87.0
Msa0870490 MtrunA17_Chr3g0077881 38.509 161 93 3 103 257 2 162 1.11e-21 94.0
Msa0870490 MtrunA17_Chr3g0077881 52.703 74 34 1 105 177 95 168 3.63e-15 75.1
Msa0870490 MtrunA17_Chr1g0205821 34.211 152 100 0 107 258 11 162 1.14e-21 94.0
Msa0870490 MtrunA17_Chr1g0205821 44.595 74 41 0 110 183 100 173 1.10e-13 70.9
Msa0870490 MtrunA17_Chr3g0077891 40.373 161 90 3 103 257 2 162 1.33e-21 93.6
Msa0870490 MtrunA17_Chr3g0077891 58.108 74 30 1 105 177 95 168 2.94e-20 89.7
Msa0870490 MtrunA17_Chr4g0075861 40.000 160 86 3 99 258 3 152 1.77e-21 98.6
Msa0870490 MtrunA17_Chr4g0075861 34.810 158 100 1 101 258 81 235 2.18e-18 89.0
Msa0870490 MtrunA17_Chr4g0075861 53.947 76 33 1 103 178 168 241 5.40e-15 78.6
Msa0870490 MtrunA17_Chr7g0218911 46.809 94 41 2 113 204 2 88 2.47e-21 90.9
Msa0870490 MtrunA17_Chr3g0077861 39.241 158 87 4 103 257 2 153 4.21e-21 92.0
Msa0870490 MtrunA17_Chr3g0077861 58.974 78 31 1 102 178 83 160 4.93e-20 89.0
Msa0870490 MtrunA17_Chr8g0364021 47.525 101 50 1 100 197 32 132 1.03e-20 93.2
Msa0870490 MtrunA17_Chr1g0205811 55.263 76 34 0 109 184 14 89 3.33e-20 87.8
Msa0870490 MtrunA17_Chr4g0075971 38.750 160 88 3 99 258 3 152 2.37e-19 94.0
Msa0870490 MtrunA17_Chr4g0075971 34.615 156 99 1 103 258 83 235 2.36e-16 84.3
Msa0870490 MtrunA17_Chr4g0075971 53.947 76 33 1 103 178 168 241 1.20e-14 79.0
Msa0870490 MtrunA17_Chr3g0077941 38.125 160 94 3 103 257 2 161 7.95e-19 85.5
Msa0870490 MtrunA17_Chr3g0077941 51.351 74 35 1 105 177 94 167 7.86e-16 77.0
Msa0870490 MtrunA17_Chr8g0362641 46.067 89 48 0 380 468 104 192 1.39e-16 82.0
Msa0870490 MtrunA17_Chr8g0362641 40.625 96 57 0 385 480 190 285 6.87e-16 80.1
Msa0870490 MtrunA17_Chr1g0205861 40.000 95 52 1 98 187 5 99 3.90e-16 76.3
Msa0870490 MtrunA17_Chr1g0156171 36.943 157 39 6 139 295 17 113 1.40e-15 74.7
Msa0870490 MtrunA17_Chr7g0218891 31.818 154 99 3 109 258 99 250 1.46e-15 78.6
Msa0870490 MtrunA17_Chr7g0218891 31.336 217 131 8 110 316 14 222 2.22e-15 78.2
Msa0870490 MtrunA17_Chr7g0218891 41.463 82 46 1 109 188 185 266 3.11e-11 65.9
Msa0870490 MtrunA17_Chr1g0205801 46.154 78 42 0 107 184 10 87 2.49e-15 73.6
Msa0870490 MtrunA17_Chr2g0328701 41.176 102 51 2 108 209 28 120 4.85e-15 73.2
Msa0870490 MtrunA17_Chr1g0209201 35.833 120 67 2 106 225 13 122 8.87e-15 73.2
Msa0870490 MtrunA17_Chr3g0077811 48.052 77 39 1 103 178 7 83 4.88e-13 67.4
Msa0870490 MtrunA17_Chr7g0256011 45.679 81 43 1 97 177 5 84 6.23e-13 67.0
Msa0870490 MtrunA17_Chr1g0205831 31.757 148 86 2 111 258 4 136 1.86e-12 67.4
Msa0870490 MtrunA17_Chr7g0218901 45.455 55 30 0 203 257 1 55 3.53e-12 62.8
Msa0870490 MtrunA17_Chr5g0415081 41.667 72 40 1 188 257 13 84 6.23e-11 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0870490 AT5G15020.2 57.539 1406 518 26 51 1429 1 1354 0.0 1476
Msa0870490 AT5G15020.1 57.052 1418 518 27 51 1429 1 1366 0.0 1467
Msa0870490 AT3G01320.1 56.307 1419 532 34 51 1428 1 1372 0.0 1425
Msa0870490 AT3G01320.2 56.113 1415 529 33 51 1428 1 1360 0.0 1416
Msa0870490 AT1G70060.2 48.348 1392 587 36 98 1427 3 1324 0.0 1144
Msa0870490 AT1G70060.1 48.348 1392 587 36 98 1427 3 1324 0.0 1144
Msa0870490 AT1G24190.3 49.083 1363 578 38 95 1402 3 1304 0.0 1142
Msa0870490 AT1G24190.2 49.083 1363 578 38 95 1402 3 1304 0.0 1141
Msa0870490 AT1G24190.1 48.866 1367 579 39 95 1402 3 1308 0.0 1134
Msa0870490 AT1G59890.2 44.123 587 239 12 380 880 117 700 3.77e-133 441
Msa0870490 AT1G59890.2 45.648 471 203 12 988 1427 717 1165 4.63e-105 362
Msa0870490 AT1G59890.2 51.103 272 109 7 51 320 1 250 8.59e-62 232
Msa0870490 AT1G59890.4 43.739 583 242 10 380 880 117 695 1.20e-132 439
Msa0870490 AT1G59890.4 47.126 435 188 10 988 1402 712 1124 2.66e-103 357
Msa0870490 AT1G59890.4 51.103 272 109 7 51 320 1 250 8.21e-62 232
Msa0870490 AT1G59890.1 43.739 583 242 10 380 880 117 695 2.27e-132 439
Msa0870490 AT1G59890.1 45.648 471 203 12 988 1427 712 1160 5.25e-105 362
Msa0870490 AT1G59890.1 51.103 272 109 7 51 320 1 250 9.66e-62 232
Msa0870490 AT1G59890.3 43.396 583 240 11 380 880 117 691 8.25e-129 429
Msa0870490 AT1G59890.3 45.648 471 203 12 988 1427 708 1156 4.65e-105 362
Msa0870490 AT1G59890.3 51.103 272 109 7 51 320 1 250 9.07e-62 232
Msa0870490 AT1G10450.2 49.647 425 192 8 485 890 264 685 6.64e-120 403
Msa0870490 AT1G10450.2 44.266 436 222 8 988 1418 689 1108 5.86e-97 338
Msa0870490 AT1G10450.2 44.966 298 121 8 51 347 1 256 4.46e-58 220
Msa0870490 AT1G10450.1 49.647 425 192 8 485 890 264 685 6.64e-120 403
Msa0870490 AT1G10450.1 44.266 436 222 8 988 1418 689 1108 5.86e-97 338
Msa0870490 AT1G10450.1 44.966 298 121 8 51 347 1 256 4.46e-58 220
Msa0870490 AT1G10450.3 49.647 425 192 8 485 890 315 736 3.28e-119 402
Msa0870490 AT1G10450.3 44.266 436 222 8 988 1418 740 1159 1.34e-96 338
Msa0870490 AT1G10450.3 44.481 308 128 8 41 347 42 307 1.57e-58 222
Msa0870490 AT1G24200.1 54.054 185 76 3 95 279 3 178 2.76e-51 179
Msa0870490 AT1G70030.1 53.846 156 70 2 102 257 4 157 6.64e-47 166
Msa0870490 AT5G15025.1 55.970 134 46 2 51 183 1 122 2.52e-38 139
Msa0870490 AT1G70030.2 44.231 156 53 2 102 257 15 136 2.66e-31 120
Msa0870490 AT5G35610.1 42.953 149 70 3 101 238 2 146 2.22e-28 112
Msa0870490 AT1G70030.3 53.704 108 49 1 102 209 15 121 2.30e-28 111
Msa0870490 AT1G24230.1 39.735 151 86 3 104 253 81 227 6.34e-27 111
Msa0870490 AT1G24230.1 31.361 169 98 4 98 263 3 156 1.03e-16 82.0
Msa0870490 AT1G10250.1 70.000 70 20 1 1195 1263 1 70 9.44e-24 96.7
Msa0870490 AT1G24250.1 37.580 157 74 2 106 261 117 250 3.79e-23 100
Msa0870490 AT1G23810.1 35.032 157 78 2 106 261 106 239 5.31e-22 97.4
Msa0870490 AT1G27280.1 35.616 146 93 1 97 241 69 214 5.43e-22 96.7
Msa0870490 AT4G12020.11 55.914 93 35 2 91 183 295 381 9.23e-22 103
Msa0870490 AT4G12020.1 55.914 93 35 2 91 183 295 381 1.05e-21 103
Msa0870490 AT4G12020.9 55.914 93 35 2 91 183 295 381 1.05e-21 103
Msa0870490 AT4G12020.3 55.914 93 35 2 91 183 295 381 1.14e-21 103
Msa0870490 AT4G12020.7 55.914 93 35 2 91 183 295 381 1.14e-21 103
Msa0870490 AT4G12020.6 55.914 93 35 2 91 183 295 381 1.16e-21 103
Msa0870490 AT4G12020.8 55.914 93 35 2 91 183 295 381 1.16e-21 103
Msa0870490 AT4G12020.10 55.914 93 35 2 91 183 295 381 1.17e-21 103
Msa0870490 AT4G12020.2 55.914 93 35 2 91 183 295 381 1.18e-21 103
Msa0870490 AT4G12020.4 55.914 93 35 2 91 183 295 381 1.19e-21 103
Msa0870490 AT4G12020.5 55.914 93 35 2 91 183 228 314 1.26e-21 103
Msa0870490 AT5G15040.1 54.054 74 34 0 112 185 6 79 5.23e-20 86.3
Msa0870490 AT5G15040.3 54.054 74 34 0 112 185 6 79 5.23e-20 86.3
Msa0870490 AT5G15040.2 54.054 74 34 0 112 185 6 79 5.23e-20 86.3
Msa0870490 AT1G24210.1 32.544 169 92 3 98 265 3 150 1.25e-19 87.8
Msa0870490 AT1G27260.1 32.500 160 84 2 98 256 82 218 8.09e-18 84.7
Msa0870490 AT1G27260.1 30.128 156 101 2 107 256 1 154 9.07e-17 81.6
Msa0870490 AT1G27240.1 33.721 172 93 4 106 256 11 182 1.21e-17 83.2
Msa0870490 AT1G27220.1 48.750 80 41 0 97 176 2 81 1.01e-16 80.1
Msa0870490 AT1G27250.1 45.349 86 43 1 95 176 3 88 1.38e-15 75.5
Msa0870490 AT1G27270.1 33.766 154 78 3 106 258 110 240 8.89e-12 67.4

Find 306 sgRNAs with CRISPR-Local

Find 802 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAAGAATGATTTACAAAATT+TGG 0.100558 6_1:-4915345 Msa0870490:intron
TGTAAACATGTTCATCATTT+TGG 0.116960 6_1:+4916863 None:intergenic
AATCTCCATGCGACTTAAAA+AGG 0.189205 6_1:+4916656 None:intergenic
CTCAGAAACAAACCGAAATA+TGG 0.194221 6_1:-4910325 Msa0870490:intron
ACTTCATTCTTGTCAGATTT+TGG 0.196682 6_1:+4912736 None:intergenic
TAGTAGAGATGATCATTTAA+TGG 0.245705 6_1:-4912623 Msa0870490:CDS
GTTCAGATTTCAATAAAGTT+TGG 0.277896 6_1:-4913342 Msa0870490:CDS
GAAGATGTCAAAGTAGTTAA+TGG 0.280275 6_1:-4910265 Msa0870490:CDS
CTTGAATTGGACTCTCTGTT+AGG 0.291590 6_1:+4912763 None:intergenic
GGAGTTAACGGAGGAGGAGG+TGG 0.295858 6_1:-4917416 Msa0870490:CDS
ATCTTCAAACTTGGCATTCT+CGG 0.300196 6_1:+4911091 None:intergenic
CCTCAATGAGCGGGGTTCTA+TGG 0.314080 6_1:-4916545 Msa0870490:CDS
TCACCATGAATTTACAGTTT+AGG 0.315500 6_1:+4909374 None:intergenic
GTCTGTCCTCCCTGGCAAAA+AGG 0.316087 6_1:-4910527 Msa0870490:CDS
TTTATGCAGTTCTAAATCTA+AGG 0.316087 6_1:-4913492 Msa0870490:intron
GAGGCTCTGGAGTACCTTCT+TGG 0.321223 6_1:-4912899 Msa0870490:CDS
GATCATTTAATGGATAATAA+AGG 0.322545 6_1:-4912613 Msa0870490:CDS
GGAAGTGAAAGACATGTTTC+AGG 0.324751 6_1:-4917339 Msa0870490:CDS
TGCAGTCGTCTAGTCCTTCT+CGG 0.325669 6_1:-4910648 Msa0870490:intron
TCAATTCATGTGATTGGAAA+TGG 0.329863 6_1:-4923790 Msa0870490:CDS
TTAGAGCGTTGTGAAAATAT+TGG 0.331915 6_1:-4914564 Msa0870490:intron
GTCTTTCACTTCCTTCAAAT+AGG 0.332619 6_1:+4917349 None:intergenic
TCTGCATCTGTCACAATTAG+AGG 0.333684 6_1:-4912514 Msa0870490:CDS
TTCAATCGAGTCAATATTAC+AGG 0.334568 6_1:+4913394 None:intergenic
GATGAATGTCGAGCAATTCT+TGG 0.338703 6_1:-4911071 Msa0870490:CDS
AACCACATAACCTTCTTAGA+AGG 0.341299 6_1:+4909066 None:intergenic
TCATCTAAGTCCCCATATTT+CGG 0.343556 6_1:+4910313 None:intergenic
TTCAGATTTCAATAAAGTTT+GGG 0.344404 6_1:-4913341 Msa0870490:CDS
CCCGGAGGTGGTGGTGGCGG+AGG 0.347061 6_1:-4917440 Msa0870490:CDS
AATTAAAAGTTCTTATTGTA+AGG 0.350521 6_1:-4909028 Msa0870490:three_prime_UTR
GGAGGTGGTGGTGGCGGAGG+TGG 0.354735 6_1:-4917437 Msa0870490:CDS
ACCTCCGCCACCACCACCTC+CGG 0.358286 6_1:+4917439 None:intergenic
CTTCCTCCTCATGATCTTCC+CGG 0.362474 6_1:+4911695 None:intergenic
ATGATTTCTTTGTTCTCTTT+AGG 0.364298 6_1:-4911465 Msa0870490:CDS
CCACCTAAACTGTAAATTCA+TGG 0.366473 6_1:-4909377 Msa0870490:exon
AGGAAATACGAGTCTAGAAA+TGG 0.366851 6_1:-4911844 Msa0870490:CDS
CAAATAGGATAAAGCATCAT+TGG 0.368007 6_1:+4917364 None:intergenic
AGATCATGAGGAGGAAGATA+TGG 0.369226 6_1:-4911689 Msa0870490:CDS
CAATTCATGTGATTGGAAAT+GGG 0.370829 6_1:-4923789 Msa0870490:CDS
ACGCCATTGGCCACTGGTAC+TGG 0.371625 6_1:+4912027 None:intergenic
CGCTGACTAGCAGTAGGAAT+TGG 0.371739 6_1:+4914001 None:intergenic
TAGGGTTCAATTCATGTGAT+TGG 0.380854 6_1:-4923796 Msa0870490:CDS
TTTGCAGACGGGTTCCTTGC+TGG 0.381199 6_1:-4914457 Msa0870490:intron
GGCCCCGGAGGTGGTGGTGG+CGG 0.384587 6_1:-4917443 Msa0870490:CDS
AGGTGCATTGAACGCCTATA+TGG 0.395051 6_1:-4913472 Msa0870490:CDS
TAAGGCACTTCAAGAATGTT+TGG 0.396241 6_1:+4915393 None:intergenic
CCTCCTCAGAGTCAGCATTC+GGG 0.401332 6_1:+4911923 None:intergenic
AGCAGAGGAAGCGTGAGAGC+AGG 0.401466 6_1:-4916309 Msa0870490:CDS
CAAGGCCCCGGAGGTGGTGG+TGG 0.408020 6_1:-4917446 Msa0870490:CDS
CACTGGGTATCTGTGACTTC+CGG 0.410808 6_1:-4913947 Msa0870490:CDS
CAACAAGCGCTGAAATGAAA+TGG 0.414086 6_1:-4911310 Msa0870490:CDS
TCCTCCTCAGAGTCAGCATT+CGG 0.414742 6_1:+4911922 None:intergenic
CATCAAGTACATCAGCTTCT+CGG 0.416660 6_1:-4909446 Msa0870490:CDS
TCAGAAACAAACCGAAATAT+GGG 0.416743 6_1:-4910324 Msa0870490:intron
AGAAACAAGAGGAGTGGAAT+AGG 0.416915 6_1:-4913369 Msa0870490:CDS
GGTCAAGGCCCCGGAGGTGG+TGG 0.417779 6_1:-4917449 Msa0870490:CDS
TTGAATTGGACTCTCTGTTA+GGG 0.418625 6_1:+4912764 None:intergenic
TGGAAATGGGGAAGAAGAAC+AGG 0.421355 6_1:-4923776 Msa0870490:intron
AGTTAACGGAGGAGGAGGTG+GGG 0.422650 6_1:-4917414 Msa0870490:CDS
TCAATAAAATTATGAGGCTC+TGG 0.422837 6_1:-4912912 Msa0870490:CDS
CAAACCACAATGACGATAGA+AGG 0.422917 6_1:-4911864 Msa0870490:CDS
GACGAGCACCGTCCAGAGGC+TGG 0.424663 6_1:-4911817 Msa0870490:CDS
AGCGTGAGAGCAGGGATAGA+AGG 0.425696 6_1:-4916300 Msa0870490:CDS
TACTTGCATTTGCCGCATCC+CGG 0.427003 6_1:+4916519 None:intergenic
TTGGCCACTGGTACTGGAGG+TGG 0.427920 6_1:+4912033 None:intergenic
AGAATTATCTGGTAAGAATC+TGG 0.428698 6_1:+4916618 None:intergenic
GATAAAGAAAACGGTTCTCT+TGG 0.429366 6_1:-4912658 Msa0870490:CDS
TCCACACAGCATGCTCCATT+TGG 0.429499 6_1:-4916586 Msa0870490:CDS
TATTGAATAACTCTTTACTT+TGG 0.429894 6_1:+4912929 None:intergenic
TTCTGCAATTTGTGCTGTAA+TGG 0.430468 6_1:-4910287 Msa0870490:CDS
TGATGCTTTATCCTATTTGA+AGG 0.431866 6_1:-4917360 Msa0870490:CDS
CATTCATATTGTCCATGAGC+TGG 0.432194 6_1:+4910617 None:intergenic
GAGAACTGTTTAACAAATCC+AGG 0.434098 6_1:+4912559 None:intergenic
CTCTGCTTCACCTTCACTCT+CGG 0.434724 6_1:+4911642 None:intergenic
GTTAACGGAGGAGGAGGTGG+GGG 0.436934 6_1:-4917413 Msa0870490:CDS
GGTGGCGGAGGTGGAGTTAA+CGG 0.438397 6_1:-4917428 Msa0870490:CDS
ATCATTTAATGGATAATAAA+GGG 0.439339 6_1:-4912612 Msa0870490:CDS
TCGACATTCATCTTCAAACT+TGG 0.440486 6_1:+4911082 None:intergenic
TATGAAAAGTCTCGGAAACC+TGG 0.442004 6_1:-4910850 Msa0870490:CDS
CAGTTTCTGCGATAAAGTTA+AGG 0.442484 6_1:-4915441 Msa0870490:CDS
GTTCTATGGCACCCGGGATG+CGG 0.444112 6_1:-4916531 Msa0870490:CDS
GAGTTAACGGAGGAGGAGGT+GGG 0.445288 6_1:-4917415 Msa0870490:CDS
TCCGAGTGCTAATGTACCTT+TGG 0.447911 6_1:-4912265 Msa0870490:CDS
CACGATCATGAGAAGAAAAT+CGG 0.448821 6_1:+4916392 None:intergenic
GAGTGTTGAACGTCCTGATC+TGG 0.449508 6_1:-4916365 Msa0870490:CDS
TCTGACAAGAATGAAGTTGA+TGG 0.449745 6_1:-4912730 Msa0870490:CDS
TCATTATCACCTCCAGCCTC+TGG 0.449905 6_1:+4911805 None:intergenic
GCTAAGGTCAAGTTCTTGAA+TGG 0.450350 6_1:+4914162 None:intergenic
GAAAGAGTAATCCTCGCTTC+CGG 0.451243 6_1:+4913928 None:intergenic
TGAGGTCATGAAAGATTTCA+AGG 0.452200 6_1:-4917288 Msa0870490:CDS
GAGGATAACTTTGTTGCCTA+TGG 0.453692 6_1:-4911904 Msa0870490:CDS
TGCATTGAATTTCGACCAAA+TGG 0.453988 6_1:+4916571 None:intergenic
CGCAAGTACTGAATGATCAC+TGG 0.457151 6_1:-4913964 Msa0870490:CDS
CAAGACCATGGTCACCATAT+AGG 0.459075 6_1:+4913458 None:intergenic
CCTTTCCGACTCATGCGATT+GGG 0.460266 6_1:+4912855 None:intergenic
CCCTTTCCGACTCATGCGAT+TGG 0.461152 6_1:+4912854 None:intergenic
TTGCTTCAACCCTTCTAAGA+AGG 0.461457 6_1:-4909076 Msa0870490:three_prime_UTR
AGCGAAAATGTTTCTGAAGC+TGG 0.461684 6_1:-4911760 Msa0870490:CDS
CCTCCGCCACCACCACCTCC+GGG 0.462154 6_1:+4917440 None:intergenic
ACTGAATCATTTAATTTCCC+AGG 0.462924 6_1:+4910832 None:intergenic
GAAGGTGCTGAAGAATTATC+TGG 0.464158 6_1:+4916607 None:intergenic
GGAAAGATTCCGCAAATTGA+TGG 0.464870 6_1:-4909406 Msa0870490:CDS
AGTTATTCAATAAAATTATG+AGG 0.465617 6_1:-4912918 Msa0870490:CDS
CATCAGCTTCTCGGTCTCGC+AGG 0.469915 6_1:-4909437 Msa0870490:CDS
TGTGATGCTGATGCACAAAC+TGG 0.470759 6_1:-4911613 Msa0870490:CDS
AACAGCAACAGCAGCAATCT+CGG 0.471061 6_1:+4910588 None:intergenic
GATGCACAAACTGGAGTAGA+TGG 0.473082 6_1:-4911604 Msa0870490:CDS
AACATGATCTTGATAACAGC+AGG 0.473114 6_1:-4916255 Msa0870490:CDS
AGTGTTATCTCATATCCCTT+TGG 0.473567 6_1:+4917068 None:intergenic
TTTCTGATGTAGGTTTGAGC+TGG 0.475066 6_1:-4913734 Msa0870490:intron
CGAAGCTCCTCCGAAGAAAA+CGG 0.475667 6_1:-4917030 Msa0870490:CDS
GGAAATACGAGTCTAGAAAT+GGG 0.477628 6_1:-4911843 Msa0870490:CDS
ACCTTCTTGGAACCGATGCT+TGG 0.481962 6_1:-4912886 Msa0870490:CDS
GAGTGCTAATGTACCTTTGG+TGG 0.483221 6_1:-4912262 Msa0870490:CDS
GACATCAGCATCAGTAGGTC+GGG 0.485289 6_1:+4912314 None:intergenic
AATGCAGCGCCTCAATGAGC+GGG 0.486636 6_1:-4916554 Msa0870490:CDS
CTTGCCAGATTCTTTATGAA+AGG 0.488681 6_1:-4911355 Msa0870490:intron
ATGTTCTCTGTCCTCCAACT+TGG 0.490073 6_1:+4914246 None:intergenic
TGGTGTCATAGCAAGGGTTA+AGG 0.492194 6_1:-4917141 Msa0870490:CDS
TGTCAAAGTAGTTAATGGAT+TGG 0.492576 6_1:-4910260 Msa0870490:CDS
AAGGAGGGGAATATTCATAT+AGG 0.493747 6_1:-4909233 Msa0870490:three_prime_UTR
TTCATTTGTTGAAGATGTGA+AGG 0.494932 6_1:-4911512 Msa0870490:CDS
TTATCTCATATCCCTTTGGC+AGG 0.495574 6_1:+4917072 None:intergenic
TCGGCTCTCGATCCAGCTCA+TGG 0.496091 6_1:-4910629 Msa0870490:CDS
AGGGCTGAGGACAGGAAAGC+AGG 0.496502 6_1:-4912835 Msa0870490:CDS
CTGCTGGTGATGAATGCTCC+CGG 0.497940 6_1:-4911714 Msa0870490:CDS
CTTCCATCACCTCCTACGTT+AGG 0.499594 6_1:+4912787 None:intergenic
TGAAGATATGGTCAAGGCCC+CGG 0.499928 6_1:-4917458 Msa0870490:intron
TTTCAGGTGACCGATTTGCT+TGG 0.499956 6_1:-4914624 Msa0870490:intron
GGGAATGTGGAAGTAGAAGT+AGG 0.500092 6_1:-4923815 Msa0870490:CDS
TCTCAATTCAAACGACCCTA+TGG 0.503231 6_1:-4922803 Msa0870490:intron
GCAGAGGAAGCGTGAGAGCA+GGG 0.504129 6_1:-4916308 Msa0870490:CDS
CTAACAGAGAGTCCAATTCA+AGG 0.504818 6_1:-4912762 Msa0870490:CDS
TTGAAGATGTGAAGGATTCA+AGG 0.505444 6_1:-4911504 Msa0870490:CDS
ACTTGCATTTGCCGCATCCC+GGG 0.505886 6_1:+4916520 None:intergenic
ACCCTTCTAAGAAGGTTATG+TGG 0.505985 6_1:-4909068 Msa0870490:three_prime_UTR
AAAGAAAACGGTTCTCTTGG+TGG 0.506625 6_1:-4912655 Msa0870490:CDS
AATAACGAACAAGTTTATAC+AGG 0.511876 6_1:+4912968 None:intergenic
TACATTAGCACTCGGAGACT+TGG 0.511993 6_1:+4912272 None:intergenic
TAAAGAGAAGCAGCAGAAAG+AGG 0.512413 6_1:-4913082 Msa0870490:CDS
TATGGTCAAGGCCCCGGAGG+TGG 0.512978 6_1:-4917452 Msa0870490:CDS
TTAGAGCCACTTGCTGCTGA+TGG 0.513114 6_1:-4914286 Msa0870490:intron
GAGAATTTCGACTGGGAATG+TGG 0.514289 6_1:-4923828 Msa0870490:CDS
GTTTCCAGGACTGACACTAC+TGG 0.514491 6_1:-4917161 Msa0870490:intron
AATATATAAATTAATCAGAC+AGG 0.514617 6_1:-4911012 Msa0870490:intron
GCTGCCAATGATAAAGAAAA+CGG 0.515018 6_1:-4912667 Msa0870490:CDS
CCATGAATTTACAGTTTAGG+TGG 0.516414 6_1:+4909377 None:intergenic
TTACAGGCAGAGCATGAGTT+GGG 0.517425 6_1:+4913410 None:intergenic
GCTGCTCATGATGATAAAGA+TGG 0.518148 6_1:-4916166 Msa0870490:CDS
AATGAAGTTGATGGTAGAGT+AGG 0.518384 6_1:-4912721 Msa0870490:CDS
GACAGAAACCTCTCTGATAA+CGG 0.520965 6_1:+4911571 None:intergenic
TTTAACACTTTCCTGCCAAA+GGG 0.523436 6_1:-4917083 Msa0870490:CDS
GGTGGAGTTAACGGAGGAGG+AGG 0.526833 6_1:-4917419 Msa0870490:CDS
GAAAGCAGTGATAAAGCCCC+TGG 0.527581 6_1:-4912577 Msa0870490:CDS
AAGGACCTACAGATTGAAAC+CGG 0.529512 6_1:+4910764 None:intergenic
AGAATGCTTTCCAAGCAAAT+CGG 0.530128 6_1:+4914614 None:intergenic
TGTTCAGATGTGAAGATGAC+AGG 0.530892 6_1:-4913871 Msa0870490:intron
GGAGGTGGAGTTAACGGAGG+AGG 0.532963 6_1:-4917422 Msa0870490:CDS
CATTGGCAGCTACACTAGTC+CGG 0.534099 6_1:+4912680 None:intergenic
ACAGCAACAGCAGCAATCTC+GGG 0.534699 6_1:+4910589 None:intergenic
AGTCGGAAAGGGCTGAGGAC+AGG 0.535860 6_1:-4912843 Msa0870490:CDS
CTGTGCATTTGAATCTCCAT+AGG 0.536629 6_1:+4911888 None:intergenic
AAGCTTAGCGTCTTCCTCAT+CGG 0.537190 6_1:+4910888 None:intergenic
ACACTACTGGTGTCATAGCA+AGG 0.537234 6_1:-4917148 Msa0870490:CDS
TGATTGTGTAGGTATGAAGA+GGG 0.537685 6_1:-4918167 Msa0870490:intron
TGATTGTGTAGGTATGAAGA+GGG 0.537685 6_1:-4922855 Msa0870490:intron
ACTAACACGCCATTGGCCAC+TGG 0.538334 6_1:+4912021 None:intergenic
TTCCTCCTCATGATCTTCCC+GGG 0.538480 6_1:+4911696 None:intergenic
CGAGAGTGAAGGTGAAGCAG+AGG 0.539112 6_1:-4911641 Msa0870490:CDS
ATCGTTCAGACTATTGCTGC+AGG 0.539751 6_1:-4913054 Msa0870490:CDS
ATGGAACATGATGATGTTGA+TGG 0.540343 6_1:-4911670 Msa0870490:CDS
TGGAGGACGCCATCAATTTG+CGG 0.540685 6_1:+4909397 None:intergenic
ACTCTTTCAAACATATGCGC+AGG 0.541044 6_1:-4913913 Msa0870490:CDS
ATCACGATCATCCAAGTTGG+AGG 0.541515 6_1:-4914257 Msa0870490:CDS
GTTCTCAACTAACACGCCAT+TGG 0.541755 6_1:+4912014 None:intergenic
AGCTGGATCGAGAGCCGAGA+AGG 0.542987 6_1:+4910634 None:intergenic
TGAAATCTTTCATGACCTCA+AGG 0.544794 6_1:+4917291 None:intergenic
GCGGCAAATGCAAGTAGATA+AGG 0.545427 6_1:-4916512 Msa0870490:intron
CCCAATCGCATGAGTCGGAA+AGG 0.547446 6_1:-4912855 Msa0870490:CDS
GCGTGAGAGCAGGGATAGAA+GGG 0.547489 6_1:-4916299 Msa0870490:CDS
ATTTAACACTTTCCTGCCAA+AGG 0.547821 6_1:-4917084 Msa0870490:CDS
CAGTGAAGTGATCTTCAATA+CGG 0.549092 6_1:+4913617 None:intergenic
GTCTTATGTGCTATTCACAT+TGG 0.549324 6_1:-4911042 Msa0870490:CDS
TTTATCACGATCATCCAAGT+TGG 0.549919 6_1:-4914260 Msa0870490:CDS
GCACCTAACGTAGGAGGTGA+TGG 0.551899 6_1:-4912790 Msa0870490:CDS
AAGATACAAGGAGAAGTACA+TGG 0.552134 6_1:-4914191 Msa0870490:CDS
AACTCGAAATGTGGAATGAG+AGG 0.553226 6_1:+4913021 None:intergenic
CACTGGTACTGGAGGTGGAG+CGG 0.553326 6_1:+4912038 None:intergenic
CGTATTGAAGATCACTTCAC+TGG 0.555491 6_1:-4913616 Msa0870490:intron
ATTACAGGCAGAGCATGAGT+TGG 0.556003 6_1:+4913409 None:intergenic
GCATTGTATAATTTGCTCGA+TGG 0.557862 6_1:-4911119 Msa0870490:CDS
AATTCATGTGATTGGAAATG+GGG 0.558542 6_1:-4923788 Msa0870490:CDS
GAACATAGGCGTGAGACGGA+TGG 0.558726 6_1:-4914229 Msa0870490:CDS
ACCACATAACCTTCTTAGAA+GGG 0.559366 6_1:+4909067 None:intergenic
ATTTCCTTCTATCGTCATTG+TGG 0.560313 6_1:+4911860 None:intergenic
GCATGAGTCGGAAAGGGCTG+AGG 0.562256 6_1:-4912848 Msa0870490:CDS
GAAAAGTCAAACTCGAAATG+TGG 0.564709 6_1:+4913012 None:intergenic
TTGATTGTGTAGGTATGAAG+AGG 0.565183 6_1:-4918168 Msa0870490:intron
TTGATTGTGTAGGTATGAAG+AGG 0.565183 6_1:-4922856 Msa0870490:intron
GACGGATGGAGGTAAAGAGA+AGG 0.565586 6_1:-4914215 Msa0870490:CDS
TGCTAATGTACCTTTGGTGG+AGG 0.568531 6_1:-4912259 Msa0870490:intron
GAGCGGGGTTCTATGGCACC+CGG 0.569077 6_1:-4916538 Msa0870490:CDS
AGCAGTGTGCATATGTCCCC+AGG 0.569312 6_1:-4912487 Msa0870490:intron
CCAATCGCATGAGTCGGAAA+GGG 0.570311 6_1:-4912854 Msa0870490:CDS
TACAGGATGTACCTTGCGTA+AGG 0.570569 6_1:+4911260 None:intergenic
TCAGCATCAGTAGGTCGGGT+TGG 0.570850 6_1:+4912318 None:intergenic
GAGAGTGAAGGTGAAGCAGA+GGG 0.572305 6_1:-4911640 Msa0870490:CDS
AGACATCAGCATCAGTAGGT+CGG 0.572882 6_1:+4912313 None:intergenic
TATACGAGTATGAAAAGTCT+CGG 0.573722 6_1:-4910858 Msa0870490:CDS
TGAATTTACAGTTTAGGTGG+AGG 0.574319 6_1:+4909380 None:intergenic
TGAAAGTTACGTACATCGGC+CGG 0.575323 6_1:+4914103 None:intergenic
AACAACGTTTGCAGTCGCTA+AGG 0.575680 6_1:+4914146 None:intergenic
TGTTGAAAATAAGATTAGTG+TGG 0.575761 6_1:-4913650 Msa0870490:CDS
CGCTCCACCTCCAGTACCAG+TGG 0.577034 6_1:-4912037 Msa0870490:CDS
TCCGAGCTACCGACTTCTAC+CGG 0.577448 6_1:-4914122 Msa0870490:CDS
TGCTGGTGATGAATGCTCCC+GGG 0.577683 6_1:-4911713 Msa0870490:CDS
GGATGGGTGAGAATTTCGAC+TGG 0.578225 6_1:-4923836 Msa0870490:CDS
TAAAGAGAAGGAAAGATACA+AGG 0.578798 6_1:-4914203 Msa0870490:CDS
GGTATATGTTCTCCTCATGA+AGG 0.581471 6_1:+4910785 None:intergenic
TCTTGATGTGGCAACAACCT+AGG 0.582290 6_1:-4909314 Msa0870490:three_prime_UTR
GGAATGTGGAAGTAGAAGTA+GGG 0.584757 6_1:-4923814 Msa0870490:CDS
ATGTGTGTGTAATCTGTATG+AGG 0.586894 6_1:-4909209 Msa0870490:three_prime_UTR
ATCTGTGACTTCCGGAAGCG+AGG 0.588696 6_1:-4913939 Msa0870490:CDS
CATCTTTACCGTTATCAGAG+AGG 0.590079 6_1:-4911579 Msa0870490:CDS
TTCATGAGGAGAACATATAC+CGG 0.591256 6_1:-4910783 Msa0870490:CDS
ATCACCACGTGATGAAGCAT+AGG 0.591343 6_1:+4918099 None:intergenic
GCAGATACATGCTTTGTGAG+AGG 0.591857 6_1:+4911538 None:intergenic
CGACCCTATGCTTCATCACG+TGG 0.593968 6_1:-4918103 Msa0870490:CDS
ACCAAGCATCGGTTCCAAGA+AGG 0.594776 6_1:+4912885 None:intergenic
TCGGTCTCGCAGGGAAAGAG+AGG 0.595406 6_1:-4909427 Msa0870490:CDS
CAATGCAGCGCCTCAATGAG+CGG 0.595730 6_1:-4916555 Msa0870490:CDS
CCATAGAACCCCGCTCATTG+AGG 0.596542 6_1:+4916545 None:intergenic
TCAGATCGCTGACTAGCAGT+AGG 0.596565 6_1:+4913995 None:intergenic
ATGTGAATAGCACATAAGAC+TGG 0.597599 6_1:+4911045 None:intergenic
TGTGTATGAAGATATGGTCA+AGG 0.597615 6_1:-4917464 Msa0870490:intron
CCTCCAGTACCAGTGGCCAA+TGG 0.597633 6_1:-4912030 Msa0870490:CDS
GAAGCTGGTGAAGATGTGTC+AGG 0.597921 6_1:-4911745 Msa0870490:CDS
GATAACACTTGATGAGGATG+AGG 0.597977 6_1:-4917054 Msa0870490:CDS
ATGAAAAGTCTCGGAAACCT+GGG 0.598934 6_1:-4910849 Msa0870490:CDS
CTCCTCAGAGTCAGCATTCG+GGG 0.599631 6_1:+4911924 None:intergenic
ATCAGCTTCTCGGTCTCGCA+GGG 0.600655 6_1:-4909436 Msa0870490:CDS
GTACATCGGCCGGTAGAAGT+CGG 0.605281 6_1:+4914113 None:intergenic
TGAAGCAGAAACAAGAGGAG+TGG 0.606159 6_1:-4913375 Msa0870490:CDS
AACTTCCCAATCGCATGAGT+CGG 0.608820 6_1:-4912860 Msa0870490:CDS
GATGTACTTGATGATGATGA+TGG 0.609778 6_1:+4909456 None:intergenic
AGGGTTAAGGAACTATTCAA+AGG 0.610387 6_1:-4917128 Msa0870490:CDS
AAAATATGACATGTTCCTTG+AGG 0.610450 6_1:-4917306 Msa0870490:CDS
ATAGAGACATCAGCATCAGT+AGG 0.611342 6_1:+4912309 None:intergenic
TGGGAAGTTACACCAAGCAT+CGG 0.611514 6_1:+4912874 None:intergenic
TATCACCTCCAGCCTCTGGA+CGG 0.613337 6_1:+4911809 None:intergenic
AGAACTGTTTAACAAATCCA+GGG 0.615778 6_1:+4912560 None:intergenic
GATATCTTGCAACTCATCCA+AGG 0.615932 6_1:-4910230 Msa0870490:intron
ACTTGTTCGTTATTCATGTG+AGG 0.618582 6_1:-4912959 Msa0870490:CDS
CAGAGAACATAGGCGTGAGA+CGG 0.618824 6_1:-4914233 Msa0870490:CDS
AAATGACCATCAGCAGCAAG+TGG 0.621642 6_1:+4914280 None:intergenic
AATGGAGCATGCTGTGTGGA+AGG 0.623233 6_1:+4916589 None:intergenic
CACTACTGGTGTCATAGCAA+GGG 0.626400 6_1:-4917147 Msa0870490:CDS
ACCAAAGGTACATTAGCACT+CGG 0.627066 6_1:+4912264 None:intergenic
TCTGTTGCACCTAACGTAGG+AGG 0.627975 6_1:-4912796 Msa0870490:CDS
TTCAAACTTGGCATTCTCGG+CGG 0.628512 6_1:+4911094 None:intergenic
TCGATTGAAGCAGAAACAAG+AGG 0.630186 6_1:-4913380 Msa0870490:CDS
CTCCGCCACCACCACCTCCG+GGG 0.631309 6_1:+4917441 None:intergenic
TGCACATGTTATCCTTCATG+AGG 0.631484 6_1:-4910797 Msa0870490:CDS
TTCTGATGCTGAAATTCACG+AGG 0.632331 6_1:-4912992 Msa0870490:CDS
CCCGAATGCTGACTCTGAGG+AGG 0.632506 6_1:-4911923 Msa0870490:CDS
ATATGAGATAACACTTGATG+AGG 0.638086 6_1:-4917060 Msa0870490:CDS
TGAACTTTCACAAGGAGCAG+AGG 0.640184 6_1:-4916324 Msa0870490:CDS
ATGATGCAAACTATTTACAA+AGG 0.640470 6_1:+4909164 None:intergenic
ATGCTCCCGGGAAGATCATG+AGG 0.641352 6_1:-4911701 Msa0870490:CDS
GTGTCAGGAAGTGAGTCTGC+TGG 0.641941 6_1:-4911730 Msa0870490:CDS
CTCACTATAAACCTCAGTGA+TGG 0.642207 6_1:+4916795 None:intergenic
TCACCACGTGATGAAGCATA+GGG 0.643350 6_1:+4918100 None:intergenic
CCATTGGCCACTGGTACTGG+AGG 0.644559 6_1:+4912030 None:intergenic
CATCACTGAGGTTTATAGTG+AGG 0.647512 6_1:-4916794 Msa0870490:intron
CATAGGCGTGAGACGGATGG+AGG 0.647806 6_1:-4914226 Msa0870490:CDS
GGAGAAGTTGAGCAGCGCTG+AGG 0.647893 6_1:-4915420 Msa0870490:CDS
GAAACTCATACCTCCACCAA+AGG 0.649483 6_1:+4912249 None:intergenic
TGAAGATGTGAAGGATTCAA+GGG 0.650035 6_1:-4911503 Msa0870490:CDS
AGCGGGGTTCTATGGCACCC+GGG 0.656076 6_1:-4916537 Msa0870490:CDS
ATCCCCGAATGCTGACTCTG+AGG 0.661035 6_1:-4911926 Msa0870490:CDS
GCAAGTACTGAATGATCACT+GGG 0.663594 6_1:-4913963 Msa0870490:CDS
CAGAAACAAACCGAAATATG+GGG 0.665228 6_1:-4910323 Msa0870490:CDS
CTCGTCAGCTCGTTTAGCAG+CGG 0.666549 6_1:+4913687 None:intergenic
AGATACAAGGAGAAGTACAT+GGG 0.666573 6_1:-4914190 Msa0870490:CDS
GATGGTAAAGCCGAGAGTGA+AGG 0.667991 6_1:-4911652 Msa0870490:CDS
GAAATACGAGTCTAGAAATG+GGG 0.668085 6_1:-4911842 Msa0870490:CDS
GTTCTACAGATCCTTACGCA+AGG 0.668821 6_1:-4911271 Msa0870490:intron
AGTTGGAGGACAGAGAACAT+AGG 0.668867 6_1:-4914243 Msa0870490:CDS
GAACGCCTATATGGTGACCA+TGG 0.669220 6_1:-4913463 Msa0870490:CDS
CTCCCGGGAAGATCATGAGG+AGG 0.670660 6_1:-4911698 Msa0870490:CDS
AACAATGATGAACTTTCACA+AGG 0.676468 6_1:-4916332 Msa0870490:CDS
ATACGAGTCTAGAAATGGGG+AGG 0.677243 6_1:-4911839 Msa0870490:CDS
TCAAACTGTTGCAACCGATG+AGG 0.677271 6_1:-4910902 Msa0870490:CDS
TGTCTAAGACATCAAGACCA+TGG 0.679362 6_1:+4913446 None:intergenic
GAACTGTTTAACAAATCCAG+GGG 0.690057 6_1:+4912561 None:intergenic
GGCGGAGGTGGAGTTAACGG+AGG 0.690346 6_1:-4917425 Msa0870490:CDS
AGTTCTGTTGCACCTAACGT+AGG 0.693937 6_1:-4912799 Msa0870490:CDS
ACATGATCTTGATAACAGCA+GGG 0.695132 6_1:-4916254 Msa0870490:CDS
GATGGGTGAGAATTTCGACT+GGG 0.695469 6_1:-4923835 Msa0870490:CDS
AGAGTGAAGGTGAAGCAGAG+GGG 0.699362 6_1:-4911639 Msa0870490:CDS
ACCAAATGGAGCATGCTGTG+TGG 0.702132 6_1:+4916585 None:intergenic
TTCATACAAGAGTCTTGATG+TGG 0.710405 6_1:-4909326 Msa0870490:three_prime_UTR
GAGCACCGTCCAGAGGCTGG+AGG 0.711256 6_1:-4911814 Msa0870490:CDS
CTTTCCAGTAAAATGCCGTG+AGG 0.738774 6_1:+4910502 None:intergenic
AGATATGGTCAAGGCCCCGG+AGG 0.761750 6_1:-4917455 Msa0870490:CDS
AGAGCACAAGACCATCACTG+AGG 0.814963 6_1:-4916806 Msa0870490:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAAAATATATATTTTAATA+AGG + chr6_1:4913742-4913761 None:intergenic 0.0%
!! AAAAAATTTGAAAAAAATTC+AGG + chr6_1:4909190-4909209 None:intergenic 10.0%
!!! GGATTTAAAATTAATAAAAT+TGG - chr6_1:4909411-4909430 Msa0870490:CDS 10.0%
!!! TATTTGTTTTGTTTTTTAAA+TGG + chr6_1:4910207-4910226 None:intergenic 10.0%
!!! TAATTAAACTCTTTTTTTTA+AGG - chr6_1:4911303-4911322 Msa0870490:CDS 10.0%
!! CAATAATTATTTAAAAAAGT+TGG - chr6_1:4912871-4912890 Msa0870490:CDS 10.0%
!!! TTTTAACAAATAAATTTGTT+TGG - chr6_1:4913153-4913172 Msa0870490:intron 10.0%
!!! TTTAACAAATAAATTTGTTT+GGG - chr6_1:4913154-4913173 Msa0870490:intron 10.0%
!!! TAACTGAATATTTTTTATTT+GGG - chr6_1:4913178-4913197 Msa0870490:intron 10.0%
!! AAAAAATATTATTCTTGAAT+AGG + chr6_1:4913229-4913248 None:intergenic 10.0%
!!! TTAATACTTAATTTGTTATT+GGG + chr6_1:4913320-4913339 None:intergenic 10.0%
!!! TTTAATACTTAATTTGTTAT+TGG + chr6_1:4913321-4913340 None:intergenic 10.0%
!!! TTTGTAAAAAGTTTTAAAAT+AGG - chr6_1:4913607-4913626 Msa0870490:intron 10.0%
!!! TTGTAAAAAGTTTTAAAATA+GGG - chr6_1:4913608-4913627 Msa0870490:intron 10.0%
!!! TTTTACACATTATAATATTA+TGG - chr6_1:4913636-4913655 Msa0870490:CDS 10.0%
!!! AAAATTTTAATGGTAATTTT+AGG + chr6_1:4913665-4913684 None:intergenic 10.0%
!!! AATTACCATTAAAATTTTAT+AGG - chr6_1:4913667-4913686 Msa0870490:CDS 10.0%
!!! ATTACCATTAAAATTTTATA+GGG - chr6_1:4913668-4913687 Msa0870490:CDS 10.0%
!!! TTAAAAACTCATAATTTTTT+AGG - chr6_1:4913698-4913717 Msa0870490:CDS 10.0%
!!! TAAAAACTCATAATTTTTTA+GGG - chr6_1:4913699-4913718 Msa0870490:CDS 10.0%
!! CAAAAAAAATATAATGAATT+TGG + chr6_1:4913865-4913884 None:intergenic 10.0%
!! AAAATTATCGAAATTATTAT+TGG + chr6_1:4914094-4914113 None:intergenic 10.0%
!!! AATAATTTCGATAATTTTAT+CGG - chr6_1:4914096-4914115 Msa0870490:intron 10.0%
!!! TTTTTTAAATAAAAAACTCT+AGG - chr6_1:4916176-4916195 Msa0870490:CDS 10.0%
!! ATAATTATACATATTTAGAT+TGG - chr6_1:4917892-4917911 Msa0870490:intron 10.0%
!!! TAAATTTTGTTTATATTTCA+AGG - chr6_1:4920508-4920527 Msa0870490:intron 10.0%
!! AAATCTATAAAAAATTATAG+AGG - chr6_1:4922403-4922422 Msa0870490:intron 10.0%
!! ATGATTTAAATATTGATAAA+AGG + chr6_1:4922745-4922764 None:intergenic 10.0%
!! AAAATTAAATTTCAGATACT+TGG - chr6_1:4909337-4909356 Msa0870490:three_prime_UTR 15.0%
!! AAATTAAATTTCAGATACTT+GGG - chr6_1:4909338-4909357 Msa0870490:three_prime_UTR 15.0%
!!! TTTTCGTTTATCAAATTTTT+TGG + chr6_1:4910306-4910325 None:intergenic 15.0%
!! TGATAAACGAAAAATTATTA+AGG - chr6_1:4910313-4910332 Msa0870490:CDS 15.0%
!! CTTTATGCTAAATAAAAAAT+AGG + chr6_1:4911095-4911114 None:intergenic 15.0%
!! GAAAAATTAAGTTATTGATA+AGG + chr6_1:4911407-4911426 None:intergenic 15.0%
!!! CTTTCTGATTATTTTATATT+AGG + chr6_1:4911453-4911472 None:intergenic 15.0%
!!! TAATTGGTACAAAATTTTAA+AGG - chr6_1:4911543-4911562 Msa0870490:CDS 15.0%
!! AACTCTTTAAATAAATAGTT+AGG + chr6_1:4911622-4911641 None:intergenic 15.0%
!!! ATTATATTTGTTGTGTTATA+TGG + chr6_1:4912206-4912225 None:intergenic 15.0%
!!! CTTGATTTTTTTTTTTTGAA+AGG - chr6_1:4912250-4912269 Msa0870490:intron 15.0%
!!! TTTGATAATAAATTAAGAGT+AGG + chr6_1:4912278-4912297 None:intergenic 15.0%
!!! TTTATTTTTTCCTTTGAATT+TGG + chr6_1:4912531-4912550 None:intergenic 15.0%
!! TAACATATTAGTTAAGTTTA+GGG + chr6_1:4912784-4912803 None:intergenic 15.0%
!! TTAACATATTAGTTAAGTTT+AGG + chr6_1:4912785-4912804 None:intergenic 15.0%
!!! TTAACAAATAAATTTGTTTG+GGG - chr6_1:4913155-4913174 Msa0870490:intron 15.0%
!!! GTAACTGAATATTTTTTATT+TGG - chr6_1:4913177-4913196 Msa0870490:intron 15.0%
!!! AACTGAATATTTTTTATTTG+GGG - chr6_1:4913179-4913198 Msa0870490:intron 15.0%
!!! TCAAGAATAATATTTTTTTG+AGG - chr6_1:4913231-4913250 Msa0870490:intron 15.0%
!! TAAAAATGTAGATATATATG+TGG + chr6_1:4913385-4913404 None:intergenic 15.0%
!! AAAAAAAAAAAACAAGTTGT+TGG + chr6_1:4914417-4914436 None:intergenic 15.0%
!!! TGAATTTGAAAATTTGATTT+TGG - chr6_1:4914826-4914845 Msa0870490:intron 15.0%
!! AAAGACTAAAAAAACAAAAT+TGG + chr6_1:4914883-4914902 None:intergenic 15.0%
!!! AATTTTGTTTTTTTAGTCTT+TGG - chr6_1:4914882-4914901 Msa0870490:intron 15.0%
!!! ATTTTGTTTTTTTAGTCTTT+GGG - chr6_1:4914883-4914902 Msa0870490:intron 15.0%
!!! GATTTGAATTTAATTTGATT+TGG - chr6_1:4915022-4915041 Msa0870490:intron 15.0%
!!! ATTTTAGTTTAAATTGATTG+TGG - chr6_1:4915165-4915184 Msa0870490:intron 15.0%
!!! GTCTATATTTATTACATTTT+TGG - chr6_1:4916765-4916784 Msa0870490:intron 15.0%
!! ACTTGTGTTATAAAATATAA+CGG - chr6_1:4916853-4916872 Msa0870490:CDS 15.0%
!! TTATAAAATATAACGGTTAT+TGG - chr6_1:4916860-4916879 Msa0870490:CDS 15.0%
!! TACAAGAATTTATATTTGTT+TGG - chr6_1:4917060-4917079 Msa0870490:CDS 15.0%
!! CAAAACATAGAAAATTATAA+AGG + chr6_1:4917348-4917367 None:intergenic 15.0%
!! AAAGAATGATTTACAAAATT+TGG - chr6_1:4917517-4917536 Msa0870490:intron 15.0%
!!! ACAATTTTTTACTTCATTTT+AGG - chr6_1:4918464-4918483 Msa0870490:intron 15.0%
!! AGTTATTCAATAAAATTATG+AGG - chr6_1:4919944-4919963 Msa0870490:intron 15.0%
!!! ATCATTTAATGGATAATAAA+GGG - chr6_1:4920250-4920269 Msa0870490:intron 15.0%
!! ATAGAAAAAAAAAAATCATG+TGG + chr6_1:4920424-4920443 None:intergenic 15.0%
!! AAGTATAAAAACTAGATAAA+AGG + chr6_1:4920661-4920680 None:intergenic 15.0%
!! TTTAATGCTTATATTGATAT+CGG - chr6_1:4920770-4920789 Msa0870490:intron 15.0%
!!! TCTTTTTTTGTTTAGATTTA+TGG - chr6_1:4921718-4921737 Msa0870490:intron 15.0%
!! AATATATAAATTAATCAGAC+AGG - chr6_1:4921850-4921869 Msa0870490:intron 15.0%
!!! AAACAATATTTTACAACTAT+TGG - chr6_1:4922843-4922862 Msa0870490:CDS 15.0%
!!! ATAAAAATGTTATTTTTCCT+AGG + chr6_1:4923568-4923587 None:intergenic 15.0%
!! ATTGAAGAAAAATATCAATT+TGG + chr6_1:4923746-4923765 None:intergenic 15.0%
!!! AAATTGATATTTTTCTTCAA+TGG - chr6_1:4923745-4923764 Msa0870490:intron 15.0%
!! AATTAAAAGTTCTTATTGTA+AGG - chr6_1:4923834-4923853 Msa0870490:CDS 15.0%
!!! AGGAAATGTTTTTTAAAATC+AGG + chr6_1:4909170-4909189 None:intergenic 20.0%
!! AACTATTAAATGTGTCAATT+TGG + chr6_1:4909470-4909489 None:intergenic 20.0%
!! ATTGACACATTTAATAGTTA+AGG - chr6_1:4909471-4909490 Msa0870490:CDS 20.0%
!! TTGACACATTTAATAGTTAA+GGG - chr6_1:4909472-4909491 Msa0870490:CDS 20.0%
!! TGAGAAGAAAAAATAAGTTA+AGG - chr6_1:4909502-4909521 Msa0870490:CDS 20.0%
!! GAGAAGAAAAAATAAGTTAA+GGG - chr6_1:4909503-4909522 Msa0870490:CDS 20.0%
!! GAAAATAAAAAACAAGTTGT+TGG + chr6_1:4909730-4909749 None:intergenic 20.0%
!! ATTATATGTGCAATTTAGTT+TGG + chr6_1:4910244-4910263 None:intergenic 20.0%
!!! TCTCAAACAATGTTTTTAAT+CGG - chr6_1:4910648-4910667 Msa0870490:intron 20.0%
!!! TTTTTTTTAAAGTATCGTAG+CGG + chr6_1:4910983-4911002 None:intergenic 20.0%
!! TAAAAAATAGGTAATCGATA+AGG + chr6_1:4911083-4911102 None:intergenic 20.0%
!!! GCTAATTCAATCATTTTAAT+TGG - chr6_1:4911242-4911261 Msa0870490:intron 20.0%
!! TAAACATATAATATCGCAAT+TGG - chr6_1:4911357-4911376 Msa0870490:intron 20.0%
!! AAATAATCAGAAAGTGAATA+AGG - chr6_1:4911459-4911478 Msa0870490:CDS 20.0%
!! AAGAAAAAAAAAAGTAAGTG+TGG + chr6_1:4911514-4911533 None:intergenic 20.0%
!!! AAAGGACGATTAATTTTTAT+CGG - chr6_1:4911561-4911580 Msa0870490:CDS 20.0%
!! TTACATATATTTAGTGTGTT+TGG + chr6_1:4911804-4911823 None:intergenic 20.0%
!! AAACACACTAAATATATGTA+AGG - chr6_1:4911803-4911822 Msa0870490:CDS 20.0%
!!! TTCTTCTTTTACTTTTCAAT+TGG + chr6_1:4912102-4912121 None:intergenic 20.0%
!! CCTAGAAAGTTATAATTTAT+TGG + chr6_1:4912603-4912622 None:intergenic 20.0%
!! CCAATAAATTATAACTTTCT+AGG - chr6_1:4912600-4912619 Msa0870490:CDS 20.0%
!! AATTATAACTTTCTAGGTTT+AGG - chr6_1:4912606-4912625 Msa0870490:CDS 20.0%
!!! GTATAAACAATGAGTTTTTT+TGG - chr6_1:4912655-4912674 Msa0870490:CDS 20.0%
!!! ATCTTGATAACAACAAATTA+AGG - chr6_1:4912685-4912704 Msa0870490:CDS 20.0%
!!! CTTTAATTTACATTTCATGT+AGG + chr6_1:4912826-4912845 None:intergenic 20.0%
!! AGAAAATTAAGAAATTACTG+CGG + chr6_1:4913120-4913139 None:intergenic 20.0%
!! AATATTATTCTTGAATAGGT+TGG + chr6_1:4913225-4913244 None:intergenic 20.0%
!!! AAGTGAATAATTTTTTTGCA+TGG + chr6_1:4913531-4913550 None:intergenic 20.0%
!! ATCCCTATAAAATGTAAATA+GGG + chr6_1:4913559-4913578 None:intergenic 20.0%
!! AATCCCTATAAAATGTAAAT+AGG + chr6_1:4913560-4913579 None:intergenic 20.0%
!!! TAGTCCCTATAAAATTTTAA+TGG + chr6_1:4913675-4913694 None:intergenic 20.0%
!! TTAAATTTACACACAATTGA+AGG - chr6_1:4913915-4913934 Msa0870490:CDS 20.0%
!! TGAAATTGTTGAATTTCATT+AGG - chr6_1:4914990-4915009 Msa0870490:intron 20.0%
!! GAAATTGTTGAATTTCATTA+GGG - chr6_1:4914991-4915010 Msa0870490:intron 20.0%
!!! AATTGTTGTTGAATTTCATT+AGG - chr6_1:4915132-4915151 Msa0870490:intron 20.0%
!!! ATTGTTGTTGAATTTCATTA+GGG - chr6_1:4915133-4915152 Msa0870490:intron 20.0%
!!! TTTGTAATGATTTTGAATGA+CGG - chr6_1:4915628-4915647 Msa0870490:intron 20.0%
!! TGTTAAATCCAAAAATCAAA+TGG + chr6_1:4915766-4915785 None:intergenic 20.0%
!!! ACATGTTTACAAATCATTTT+TGG - chr6_1:4916011-4916030 Msa0870490:intron 20.0%
!!! TTAACATATTTCTTTTTGTC+AGG + chr6_1:4916654-4916673 None:intergenic 20.0%
!!! CATTTCCTCTTAATTTTTTT+AGG + chr6_1:4916900-4916919 None:intergenic 20.0%
!! AAACAAATAAGAAGAAATAG+TGG + chr6_1:4917037-4917056 None:intergenic 20.0%
!!! ACTATTTCTTCTTATTTGTT+TGG - chr6_1:4917036-4917055 Msa0870490:CDS 20.0%
!! TATGGCAGTAATATAAATAA+TGG + chr6_1:4917096-4917115 None:intergenic 20.0%
!! TAAAGAAAGAAAAAGTGATA+TGG + chr6_1:4917114-4917133 None:intergenic 20.0%
!!! TTTTTTTTAACTCCAAACAT+GGG + chr6_1:4917197-4917216 None:intergenic 20.0%
!!! ATTTTTTTTAACTCCAAACA+TGG + chr6_1:4917198-4917217 None:intergenic 20.0%
!! TACAACAGAAAATGATAAAT+TGG + chr6_1:4918087-4918106 None:intergenic 20.0%
!!! TTTTATCAATTCATTGAAGT+AGG - chr6_1:4918126-4918145 Msa0870490:CDS 20.0%
!!! AGCATTTTTTTTCATTCATT+TGG - chr6_1:4918524-4918543 Msa0870490:intron 20.0%
!! TATAACAAAGTAGAGAAATA+AGG + chr6_1:4919315-4919334 None:intergenic 20.0%
!! TTCAGATTTCAATAAAGTTT+GGG - chr6_1:4919521-4919540 Msa0870490:intron 20.0%
!! TATTGAATAACTCTTTACTT+TGG + chr6_1:4919936-4919955 None:intergenic 20.0%
!!! GATCATTTAATGGATAATAA+AGG - chr6_1:4920249-4920268 Msa0870490:intron 20.0%
!! TAAACCTAATACATAATTAC+AGG + chr6_1:4921622-4921641 None:intergenic 20.0%
!! ATGCTAAAATAAAGAATTGA+TGG + chr6_1:4922458-4922477 None:intergenic 20.0%
!! AAATGAGGAAAAACTTATTA+AGG + chr6_1:4922810-4922829 None:intergenic 20.0%
!! TACAACTATTGGTATATAAT+TGG - chr6_1:4922854-4922873 Msa0870490:intron 20.0%
!! AACAAATGTTAATCTAACAA+AGG - chr6_1:4922891-4922910 Msa0870490:intron 20.0%
!! TCAAATTACCTTGTAAATAT+AGG + chr6_1:4923060-4923079 None:intergenic 20.0%
!!! TTATTTTGACACAATTTAGT+GGG + chr6_1:4923176-4923195 None:intergenic 20.0%
!!! ATTATTTTGACACAATTTAG+TGG + chr6_1:4923177-4923196 None:intergenic 20.0%
!! GAATTAAACAATTCATCATT+TGG + chr6_1:4923245-4923264 None:intergenic 20.0%
!!! TCATATAGTTTTTCTATCTT+TGG - chr6_1:4923285-4923304 Msa0870490:intron 20.0%
!!! ATTTTCATATGAAAAAGTGA+AGG - chr6_1:4923610-4923629 Msa0870490:intron 20.0%
! AACAGGTAGAGAAAAAAATA+GGG - chr6_1:4909103-4909122 Msa0870490:three_prime_UTR 25.0%
! GAGAAAAAAATAGGGTAATT+TGG - chr6_1:4909111-4909130 Msa0870490:three_prime_UTR 25.0%
! AATTGGACCAATTAAGTAAA+CGG - chr6_1:4909428-4909447 Msa0870490:CDS 25.0%
! AAAAAATAAGTTAAGGGACT+TGG - chr6_1:4909509-4909528 Msa0870490:CDS 25.0%
! AAAAATAAGTTAAGGGACTT+GGG - chr6_1:4909510-4909529 Msa0870490:CDS 25.0%
!!! AATGAAAGAAGGTTTTGAAA+AGG + chr6_1:4909547-4909566 None:intergenic 25.0%
! TGAGAGAAAAAAATGAAAGA+AGG + chr6_1:4909558-4909577 None:intergenic 25.0%
!! AAACAAGTTGTTGGATTTTA+AGG + chr6_1:4909721-4909740 None:intergenic 25.0%
!!! TTGTGATTTTTTGATTGTGT+AGG - chr6_1:4909996-4910015 Msa0870490:intron 25.0%
!! TCTCTTTTCTACATTGTTTT+TGG + chr6_1:4910102-4910121 None:intergenic 25.0%
! AAAAACAATGTAGAAAAGAG+AGG - chr6_1:4910101-4910120 Msa0870490:intron 25.0%
! CTTCTATTCATAATAGAGTA+AGG - chr6_1:4910337-4910356 Msa0870490:intron 25.0%
! CGTAAAATAAAGGATGATAT+TGG + chr6_1:4910399-4910418 None:intergenic 25.0%
! TTGGATACAATTAATCATCA+TGG - chr6_1:4910436-4910455 Msa0870490:intron 25.0%
! ACCTGTCAAAAAAAAAGTTT+AGG - chr6_1:4910566-4910585 Msa0870490:CDS 25.0%
! CCTGTCAAAAAAAAAGTTTA+GGG - chr6_1:4910567-4910586 Msa0870490:CDS 25.0%
!!! CTCAAACAATGTTTTTAATC+GGG - chr6_1:4910649-4910668 Msa0870490:intron 25.0%
! AGATATTGCATATTAGATGT+AGG - chr6_1:4910789-4910808 Msa0870490:CDS 25.0%
! GATATTGCATATTAGATGTA+GGG - chr6_1:4910790-4910809 Msa0870490:CDS 25.0%
!! TACCAATTGAAATTTGTTCA+CGG + chr6_1:4910881-4910900 None:intergenic 25.0%
! AGGTCAATAAATAGAGAATT+TGG + chr6_1:4910944-4910963 None:intergenic 25.0%
! AAAAAAAACTAGGACAAACT+TGG + chr6_1:4911212-4911231 None:intergenic 25.0%
!! TTCTCTCTCTAAAAAAAACT+AGG + chr6_1:4911222-4911241 None:intergenic 25.0%
!! TTTTCTTCCTACAATGTAAT+TGG - chr6_1:4911527-4911546 Msa0870490:CDS 25.0%
!! TTTTGTACCAATTACATTGT+AGG + chr6_1:4911537-4911556 None:intergenic 25.0%
!!! TTTTTATCGGTGAATTTGTT+AGG - chr6_1:4911574-4911593 Msa0870490:CDS 25.0%
!! TATTATGCAATGTTTCTATG+AGG + chr6_1:4911656-4911675 None:intergenic 25.0%
! CACTAAATATATGTAAGGTT+CGG - chr6_1:4911808-4911827 Msa0870490:CDS 25.0%
!!! ATATATTGATTCAAGTGGTT+AGG + chr6_1:4911871-4911890 None:intergenic 25.0%
!!! CAAGAATATATTGATTCAAG+TGG + chr6_1:4911876-4911895 None:intergenic 25.0%
! TTTGTTAAACTTGTGTTATG+TGG + chr6_1:4911992-4912011 None:intergenic 25.0%
! AGTAAAAGAAGAAAAAACCA+CGG - chr6_1:4912109-4912128 Msa0870490:intron 25.0%
! AATAAACCAGTTTAAATCCA+CGG + chr6_1:4912171-4912190 None:intergenic 25.0%
!!! ATTTGTTGTGTTATATGGAT+CGG + chr6_1:4912201-4912220 None:intergenic 25.0%
! TAAGAGAGTCAATGTTAAAA+AGG + chr6_1:4912414-4912433 None:intergenic 25.0%
! GAAAATTAAGAAATTACTGC+GGG + chr6_1:4913119-4913138 None:intergenic 25.0%
! AGATGAATGAAATTCAACAA+TGG - chr6_1:4913437-4913456 Msa0870490:CDS 25.0%
!! AGTCCCTATTTACATTTTAT+AGG - chr6_1:4913553-4913572 Msa0870490:intron 25.0%
!! GTCCCTATTTACATTTTATA+GGG - chr6_1:4913554-4913573 Msa0870490:intron 25.0%
! ATCAATTGAGATACAACTAA+TGG - chr6_1:4913963-4913982 Msa0870490:CDS 25.0%
! TCAATTGAGATACAACTAAT+GGG - chr6_1:4913964-4913983 Msa0870490:CDS 25.0%
!!! TAGTCTTATTGTAAGTAATC+CGG + chr6_1:4914141-4914160 None:intergenic 25.0%
! TGAAGAATGAATTGAAATTG+AGG + chr6_1:4914207-4914226 None:intergenic 25.0%
! TGAGAGAAAAAAATGAAAGA+AGG + chr6_1:4909558-4909577 None:intergenic 25.0%
!! AAACAAGTTGTTGGATTTTA+AGG + chr6_1:4909721-4909740 None:intergenic 25.0%
!!! TTTTGTGATTTTGATTGTGT+AGG - chr6_1:4914684-4914703 Msa0870490:intron 25.0%
! GTTGTTGTATAAAACTTACT+AGG - chr6_1:4915189-4915208 Msa0870490:intron 25.0%
!!! ATGAATTTTGATAGTGTTGT+AGG - chr6_1:4915316-4915335 Msa0870490:intron 25.0%
!!! TGTTGTAGTTGTTGATAATT+AGG - chr6_1:4915351-4915370 Msa0870490:CDS 25.0%
!!! GTTGTAGTTGTTGATAATTA+GGG - chr6_1:4915352-4915371 Msa0870490:CDS 25.0%
!!! ATCATTGGTTGTCAATTTTT+GGG + chr6_1:4915486-4915505 None:intergenic 25.0%
!!! TAGTTTTGTGAACAAGATAA+AGG - chr6_1:4915874-4915893 Msa0870490:intron 25.0%
!!! AATTGATTCGTAGCTTTAAT+TGG - chr6_1:4915950-4915969 Msa0870490:intron 25.0%
!! TGTAAACATGTTCATCATTT+TGG + chr6_1:4916002-4916021 None:intergenic 25.0%
!!! AGCTTTGTCCTATAAATTTT+TGG - chr6_1:4916095-4916114 Msa0870490:intron 25.0%
! TAAGATATCATACTATGCTT+TGG - chr6_1:4916728-4916747 Msa0870490:intron 25.0%
! AAAATTCAAGAAACTTGACA+TGG + chr6_1:4917245-4917264 None:intergenic 25.0%
!!! TTGAAGTGCCTTAATATTTT+TGG - chr6_1:4917479-4917498 Msa0870490:intron 25.0%
! ATATTTAGATTGGATGTCTA+TGG - chr6_1:4917902-4917921 Msa0870490:intron 25.0%
! TATCATATTTACTCATTCCT+TGG - chr6_1:4918360-4918379 Msa0870490:intron 25.0%
! ATCATATTTACTCATTCCTT+GGG - chr6_1:4918361-4918380 Msa0870490:intron 25.0%
!!! AAATCGATTACTTTTCTTGT+TGG - chr6_1:4918781-4918800 Msa0870490:intron 25.0%
!!! AACATTGTTATTTCTGATGT+AGG - chr6_1:4919118-4919137 Msa0870490:intron 25.0%
! TGTTGAAAATAAGATTAGTG+TGG - chr6_1:4919212-4919231 Msa0870490:intron 25.0%
! CTGCATAAACATGTATATAT+CGG + chr6_1:4919359-4919378 None:intergenic 25.0%
!!! TTTATGCAGTTCTAAATCTA+AGG - chr6_1:4919370-4919389 Msa0870490:intron 25.0%
! GTTCAGATTTCAATAAAGTT+TGG - chr6_1:4919520-4919539 Msa0870490:intron 25.0%
! AATAACGAACAAGTTTATAC+AGG + chr6_1:4919897-4919916 None:intergenic 25.0%
! TAGTAGAGATGATCATTTAA+TGG - chr6_1:4920239-4920258 Msa0870490:intron 25.0%
! TTATATTGATATCGGTATGT+CGG - chr6_1:4920778-4920797 Msa0870490:intron 25.0%
! ATGATTTCTTTGTTCTCTTT+AGG - chr6_1:4921397-4921416 Msa0870490:intron 25.0%
! TATATAAGACATCAACACAA+AGG + chr6_1:4921476-4921495 None:intergenic 25.0%
! ACATCCTGTAATTATGTATT+AGG - chr6_1:4921615-4921634 Msa0870490:intron 25.0%
! TCTAAACAAAAAAAGAACAG+TGG + chr6_1:4921714-4921733 None:intergenic 25.0%
!! TGTCATTTGTTTCTCTTTAA+AGG - chr6_1:4921904-4921923 Msa0870490:intron 25.0%
!! ACTTTTCATACTCGTATAAT+TGG + chr6_1:4922002-4922021 None:intergenic 25.0%
! TGCAGATAAAATGAAAAATC+TGG + chr6_1:4922303-4922322 None:intergenic 25.0%
!!! AAGTTTTTCCTCATTTTTGT+AGG - chr6_1:4922814-4922833 Msa0870490:CDS 25.0%
! TTATTCATCCTACAAAAATG+AGG + chr6_1:4922825-4922844 None:intergenic 25.0%
! GTTAATCTAACAAAGGAATT+AGG - chr6_1:4922898-4922917 Msa0870490:intron 25.0%
! ATAATGACACATAAAAACTC+AGG + chr6_1:4922987-4923006 None:intergenic 25.0%
! TTGAAGAACCTATATTTACA+AGG - chr6_1:4923049-4923068 Msa0870490:intron 25.0%
! AAACAATTCATCATTTGGAT+CGG + chr6_1:4923240-4923259 None:intergenic 25.0%
! ATGATGCAAACTATTTACAA+AGG + chr6_1:4923701-4923720 None:intergenic 25.0%
TCAATTCATGTGATTGGAAA+TGG - chr6_1:4909072-4909091 Msa0870490:three_prime_UTR 30.0%
CAATTCATGTGATTGGAAAT+GGG - chr6_1:4909073-4909092 Msa0870490:three_prime_UTR 30.0%
AATTCATGTGATTGGAAATG+GGG - chr6_1:4909074-4909093 Msa0870490:three_prime_UTR 30.0%
GAACAGGTAGAGAAAAAAAT+AGG - chr6_1:4909102-4909121 Msa0870490:three_prime_UTR 30.0%
! TAATTTTAAATCCCTACCGT+TGG + chr6_1:4909404-4909423 None:intergenic 30.0%
AAAATAAGTTAAGGGACTTG+GGG - chr6_1:4909511-4909530 Msa0870490:CDS 30.0%
! TTTTCTCAGCATAATTTTCG+TGG - chr6_1:4909817-4909836 Msa0870490:intron 30.0%
! TTTCTCAGCATAATTTTCGT+GGG - chr6_1:4909818-4909837 Msa0870490:intron 30.0%
!!! TTTTTTCCCTTTTCACTTTC+TGG - chr6_1:4909859-4909878 Msa0870490:intron 30.0%
! TTTTTCCCTTTTCACTTTCT+GGG - chr6_1:4909860-4909879 Msa0870490:intron 30.0%
!! TGCAATTTAGTTTGGAACTT+TGG + chr6_1:4910236-4910255 None:intergenic 30.0%
TGATCATTGAATCAGATTGA+AGG - chr6_1:4910367-4910386 Msa0870490:intron 30.0%
ACATGGTACTCGTAAAATAA+AGG + chr6_1:4910409-4910428 None:intergenic 30.0%
!!! CCCTAAACTTTTTTTTTGAC+AGG + chr6_1:4910570-4910589 None:intergenic 30.0%
AAAAAAAGTTTAGGGAGAAG+TGG - chr6_1:4910575-4910594 Msa0870490:CDS 30.0%
AAAAAAGTTTAGGGAGAAGT+GGG - chr6_1:4910576-4910595 Msa0870490:CDS 30.0%
TGTCAACTGAATTAAACTCA+CGG + chr6_1:4910761-4910780 None:intergenic 30.0%
! ACCAATTGAAATTTGTTCAC+GGG + chr6_1:4910880-4910899 None:intergenic 30.0%
GCGGCTATAAATTTACTTTA+AGG + chr6_1:4910964-4910983 None:intergenic 30.0%
CATTGCATAATAAGTGTGTT+TGG - chr6_1:4911664-4911683 Msa0870490:CDS 30.0%
! AATAAGTGTGTTTGGAATAC+CGG - chr6_1:4911672-4911691 Msa0870490:CDS 30.0%
!!! AGGATTTAGACTCTTTTTTC+TGG + chr6_1:4911851-4911870 None:intergenic 30.0%
GTAAAAGAAGAAAAAACCAC+GGG - chr6_1:4912110-4912129 Msa0870490:intron 30.0%
ACAATAGTAATTACATTCCG+TGG - chr6_1:4912151-4912170 Msa0870490:intron 30.0%
TTACTTTGAGTCATTTCATG+CGG + chr6_1:4912350-4912369 None:intergenic 30.0%
CATGAAATGACTCAAAGTAA+AGG - chr6_1:4912350-4912369 Msa0870490:intron 30.0%
GGAACGAATCTCATATATAT+TGG - chr6_1:4912466-4912485 Msa0870490:intron 30.0%
ACGAATCTCATATATATTGG+TGG - chr6_1:4912469-4912488 Msa0870490:intron 30.0%
CGAATCTCATATATATTGGT+GGG - chr6_1:4912470-4912489 Msa0870490:intron 30.0%
! AGCTAGCATAAATTTTATGC+AGG - chr6_1:4912504-4912523 Msa0870490:CDS 30.0%
! GCTAGCATAAATTTTATGCA+GGG - chr6_1:4912505-4912524 Msa0870490:CDS 30.0%
TTCAGTCTCAATAACAAATC+TGG + chr6_1:4913064-4913083 None:intergenic 30.0%
TGAATGAATGATTACTAGGA+AGG + chr6_1:4913801-4913820 None:intergenic 30.0%
GACATGAATGAATGATTACT+AGG + chr6_1:4913805-4913824 None:intergenic 30.0%
! TTTTCTCAGCATAATTTTCG+TGG - chr6_1:4909817-4909836 Msa0870490:intron 30.0%
! TTTCTCAGCATAATTTTCGT+GGG - chr6_1:4909818-4909837 Msa0870490:intron 30.0%
!!! TTTTTTCGCTTTTCACTTTC+TGG - chr6_1:4914549-4914568 Msa0870490:intron 30.0%
!! TTTTTCGCTTTTCACTTTCT+GGG - chr6_1:4914550-4914569 Msa0870490:intron 30.0%
AGCAGTGAAACACAAAATTA+GGG + chr6_1:4914921-4914940 None:intergenic 30.0%
ACTTGTATCTATTTCACTTG+TGG - chr6_1:4914965-4914984 Msa0870490:intron 30.0%
AACAGCGAAACACAAAATTA+GGG + chr6_1:4915061-4915080 None:intergenic 30.0%
TGTATAAAACTTACTAGGCA+AGG - chr6_1:4915194-4915213 Msa0870490:intron 30.0%
! GCATTTTGTGTATGAAGATA+TGG - chr6_1:4915392-4915411 Msa0870490:CDS 30.0%
!! CATCATTGGTTGTCAATTTT+TGG + chr6_1:4915487-4915506 None:intergenic 30.0%
! CAAATAGGATAAAGCATCAT+TGG + chr6_1:4915501-4915520 None:intergenic 30.0%
TGATGCTTTATCCTATTTGA+AGG - chr6_1:4915502-4915521 Msa0870490:intron 30.0%
AAAATATGACATGTTCCTTG+AGG - chr6_1:4915556-4915575 Msa0870490:intron 30.0%
TTAAGATCCCCTGATTATTT+AGG + chr6_1:4915663-4915682 None:intergenic 30.0%
!!! ATTTATTTTTGGCTGTTTCC+AGG - chr6_1:4915687-4915706 Msa0870490:intron 30.0%
ATATGAGATAACACTTGATG+AGG - chr6_1:4915802-4915821 Msa0870490:intron 30.0%
! TCAAATTCAACCGTTTTCTT+CGG + chr6_1:4915845-4915864 None:intergenic 30.0%
ATTATAGCGGTAAACTAACT+CGG + chr6_1:4915933-4915952 None:intergenic 30.0%
AAGCTACGAATCAATTATAG+CGG + chr6_1:4915946-4915965 None:intergenic 30.0%
! GCAAAGTGCCAAAAATTTAT+AGG + chr6_1:4916106-4916125 None:intergenic 30.0%
AGAATTATCTGGTAAGAATC+TGG + chr6_1:4916247-4916266 None:intergenic 30.0%
AAAAATCGTTATGAAGAGGA+AGG + chr6_1:4916385-4916404 None:intergenic 30.0%
GTACAAAAATCGTTATGAAG+AGG + chr6_1:4916389-4916408 None:intergenic 30.0%
! TACTTTTACAGCAACGATAT+CGG - chr6_1:4916442-4916461 Msa0870490:intron 30.0%
AACAATGATGAACTTTCACA+AGG - chr6_1:4916530-4916549 Msa0870490:CDS 30.0%
ACAGCATATTGAAAACATGA+TGG + chr6_1:4916821-4916840 None:intergenic 30.0%
CACAGCCTAAAAAAATTAAG+AGG - chr6_1:4916892-4916911 Msa0870490:intron 30.0%
GATGCATAGAACTTACTATT+AGG - chr6_1:4917144-4917163 Msa0870490:CDS 30.0%
CATAGAACTTACTATTAGGA+CGG - chr6_1:4917148-4917167 Msa0870490:CDS 30.0%
TTAGTATTTGTTTGTCCTGT+TGG - chr6_1:4917272-4917291 Msa0870490:intron 30.0%
!!! TGCCTTAATATTTTTGGCAA+CGG - chr6_1:4917485-4917504 Msa0870490:intron 30.0%
TTCCGTTGCCAAAAATATTA+AGG + chr6_1:4917490-4917509 None:intergenic 30.0%
! TATGTGCTTCATTTTCGTAT+TGG - chr6_1:4917540-4917559 Msa0870490:intron 30.0%
AAAAGTCCTAGAGATCTAAA+GGG + chr6_1:4917586-4917605 None:intergenic 30.0%
TAAAAGTCCTAGAGATCTAA+AGG + chr6_1:4917587-4917606 None:intergenic 30.0%
TACTCAAATGCTTTCACTTA+TGG - chr6_1:4917657-4917676 Msa0870490:intron 30.0%
ACTCAAATGCTTTCACTTAT+GGG - chr6_1:4917658-4917677 Msa0870490:intron 30.0%
GCAACTTTGGACAAATTATT+TGG - chr6_1:4917685-4917704 Msa0870490:intron 30.0%
! TATCATTTTCTTTTCGGCTA+AGG + chr6_1:4917726-4917745 None:intergenic 30.0%
TTAGCCGAAAAGAAAATGAT+AGG - chr6_1:4917725-4917744 Msa0870490:intron 30.0%
! AGCTCCTATCATTTTCTTTT+CGG + chr6_1:4917732-4917751 None:intergenic 30.0%
ATAGTGTGTATGAAAGGTTT+AGG - chr6_1:4917755-4917774 Msa0870490:intron 30.0%
TAGTGTGTATGAAAGGTTTA+GGG - chr6_1:4917756-4917775 Msa0870490:intron 30.0%
GAATGACAATCCAAAAACTA+GGG + chr6_1:4917944-4917963 None:intergenic 30.0%
AGAATGACAATCCAAAAACT+AGG + chr6_1:4917945-4917964 None:intergenic 30.0%
!! TAGTTTTTGGATTGTCATTC+TGG - chr6_1:4917944-4917963 Msa0870490:intron 30.0%
CAAAAGGATATAAATTGCTC+TGG + chr6_1:4918209-4918228 None:intergenic 30.0%
CCTGAAACATACATTTCAAA+AGG + chr6_1:4918225-4918244 None:intergenic 30.0%
!!! CCTTTTGAAATGTATGTTTC+AGG - chr6_1:4918222-4918241 Msa0870490:intron 30.0%
!! TTAGAGCGTTGTGAAAATAT+TGG - chr6_1:4918298-4918317 Msa0870490:intron 30.0%
TCATATTTACTCATTCCTTG+GGG - chr6_1:4918362-4918381 Msa0870490:intron 30.0%
TAAAGAGAAGGAAAGATACA+AGG - chr6_1:4918659-4918678 Msa0870490:intron 30.0%
GATTTGAAAGTTACGTACAT+CGG + chr6_1:4918766-4918785 None:intergenic 30.0%
AATGTTCATTTCAGAGTCAT+TGG - chr6_1:4919047-4919066 Msa0870490:intron 30.0%
TTCAATCGAGTCAATATTAC+AGG + chr6_1:4919471-4919490 None:intergenic 30.0%
CATTGAACTCTGTACTAAAT+TGG - chr6_1:4919667-4919686 Msa0870490:intron 30.0%
CTGTTGCAATATTTCATGTT+TGG - chr6_1:4919722-4919741 Msa0870490:intron 30.0%
TCAATAAAATTATGAGGCTC+TGG - chr6_1:4919950-4919969 Msa0870490:intron 30.0%
! ACTTCATTCTTGTCAGATTT+TGG + chr6_1:4920129-4920148 None:intergenic 30.0%
AGAGTAGGTGAAGTTAAAAA+TGG - chr6_1:4920156-4920175 Msa0870490:intron 30.0%
! AGAACCGTTTTCTTTATCAT+TGG + chr6_1:4920202-4920221 None:intergenic 30.0%
AGAACTGTTTAACAAATCCA+GGG + chr6_1:4920305-4920324 None:intergenic 30.0%
GTACACAACTATGTTGTATA+CGG + chr6_1:4920402-4920421 None:intergenic 30.0%
AAAATAAAACCCTTCGACTA+AGG + chr6_1:4920750-4920769 None:intergenic 30.0%
!!! TCTTCTTTTTCAACTTTGCA+AGG + chr6_1:4920907-4920926 None:intergenic 30.0%
TTGCAAAGTTGAAAAAGAAG+AGG - chr6_1:4920906-4920925 Msa0870490:intron 30.0%
TGCAAAGTTGAAAAAGAAGA+GGG - chr6_1:4920907-4920926 Msa0870490:intron 30.0%
! TTCATTTGTTGAAGATGTGA+AGG - chr6_1:4921350-4921369 Msa0870490:intron 30.0%
AGATCCTTTCATAAAGAATC+TGG + chr6_1:4921514-4921533 None:intergenic 30.0%
GAAACAAATGACAAGTATGT+AGG + chr6_1:4921897-4921916 None:intergenic 30.0%
TATACGAGTATGAAAAGTCT+CGG - chr6_1:4922004-4922023 Msa0870490:intron 30.0%
! ACTGAATCATTTAATTTCCC+AGG + chr6_1:4922033-4922052 None:intergenic 30.0%
TCAGAAACAAACCGAAATAT+GGG - chr6_1:4922538-4922557 Msa0870490:intron 30.0%
GAAGATGTCAAAGTAGTTAA+TGG - chr6_1:4922597-4922616 Msa0870490:intron 30.0%
! TGTCAAAGTAGTTAATGGAT+TGG - chr6_1:4922602-4922621 Msa0870490:intron 30.0%
! TATGAAAAAGAAGCATACCT+TGG + chr6_1:4922652-4922671 None:intergenic 30.0%
! TAAAGTACTAACCTGCAAAA+TGG + chr6_1:4922692-4922711 None:intergenic 30.0%
TCAAACATTTCAAATCCAGA+GGG + chr6_1:4923013-4923032 None:intergenic 30.0%
ATCAAACATTTCAAATCCAG+AGG + chr6_1:4923014-4923033 None:intergenic 30.0%
ATTTAGTGGGAAAAAGCTTT+CGG + chr6_1:4923163-4923182 None:intergenic 30.0%
TCACCATGAATTTACAGTTT+AGG + chr6_1:4923491-4923510 None:intergenic 30.0%
TTCATATGAAAAAGTGAAGG+AGG - chr6_1:4923613-4923632 Msa0870490:intron 30.0%
TCATATGAAAAAGTGAAGGA+GGG - chr6_1:4923614-4923633 Msa0870490:intron 30.0%
TAGGGTTCAATTCATGTGAT+TGG - chr6_1:4909066-4909085 Msa0870490:three_prime_UTR 35.0%
AATTTCAGATACTTGGGTGT+TGG - chr6_1:4909344-4909363 Msa0870490:three_prime_UTR 35.0%
ACCAATTAAGTAAACGGAAG+AGG - chr6_1:4909434-4909453 Msa0870490:CDS 35.0%
TCCTCTTCCGTTTACTTAAT+TGG + chr6_1:4909438-4909457 None:intergenic 35.0%
!! AGTTTTGGTGTGAGAGAAAA+CGG + chr6_1:4909624-4909643 None:intergenic 35.0%
! ATCTTCAAGATGGGTTTGAT+CGG + chr6_1:4909782-4909801 None:intergenic 35.0%
CTTGAGTAGATCTTCAAGAT+GGG + chr6_1:4909791-4909810 None:intergenic 35.0%
ACTTGAGTAGATCTTCAAGA+TGG + chr6_1:4909792-4909811 None:intergenic 35.0%
TTGATTGTGTAGGTATGAAG+AGG - chr6_1:4910006-4910025 Msa0870490:intron 35.0%
TGATTGTGTAGGTATGAAGA+GGG - chr6_1:4910007-4910026 Msa0870490:intron 35.0%
! ACACTCTCTTTTCTACCATA+GGG + chr6_1:4910077-4910096 None:intergenic 35.0%
! TACACTCTCTTTTCTACCAT+AGG + chr6_1:4910078-4910097 None:intergenic 35.0%
TTGTATCCAAATCTCTCACA+TGG + chr6_1:4910426-4910445 None:intergenic 35.0%
AAGCACACAAACAAAGTTGT+AGG - chr6_1:4910539-4910558 Msa0870490:CDS 35.0%
AGCACACAAACAAAGTTGTA+GGG - chr6_1:4910540-4910559 Msa0870490:CDS 35.0%
AAAAAGTTTAGGGAGAAGTG+GGG - chr6_1:4910577-4910596 Msa0870490:CDS 35.0%
! TTGAAATTTGTTCACGGGTA+TGG + chr6_1:4910875-4910894 None:intergenic 35.0%
ACCCGTGAACAAATTTCAAT+TGG - chr6_1:4910876-4910895 Msa0870490:CDS 35.0%
GACTTATGACATTGTAGTCT+AGG + chr6_1:4911014-4911033 None:intergenic 35.0%
TTTCCAGCTTCACAAAATCA+CGG - chr6_1:4911734-4911753 Msa0870490:CDS 35.0%
TCACAAAATCACGGTGAAAA+TGG - chr6_1:4911743-4911762 Msa0870490:CDS 35.0%
AACCACGGGCTTATAATATA+TGG - chr6_1:4912124-4912143 Msa0870490:intron 35.0%
AACCATATATTATAAGCCCG+TGG + chr6_1:4912129-4912148 None:intergenic 35.0%
TACATTCCGTGGATTTAAAC+TGG - chr6_1:4912162-4912181 Msa0870490:intron 35.0%
TCATTTGAACATCTCCATTC+AGG - chr6_1:4912445-4912464 Msa0870490:intron 35.0%
ATATGAGATTCGTTCCTGAA+TGG + chr6_1:4912462-4912481 None:intergenic 35.0%
TTATTGGGTGAAACTTGTGT+GGG + chr6_1:4913305-4913324 None:intergenic 35.0%
ATTGAGATACAACTAATGGG+CGG - chr6_1:4913967-4913986 Msa0870490:CDS 35.0%
!! AGTTTTGGTGTGAGAGAAAA+CGG + chr6_1:4909624-4909643 None:intergenic 35.0%
! ATCTTCAAGATGGGTTTGAT+CGG + chr6_1:4909782-4909801 None:intergenic 35.0%
CTTGAGTAGATCTTCAAGAT+GGG + chr6_1:4909791-4909810 None:intergenic 35.0%
ACTTGAGTAGATCTTCAAGA+TGG + chr6_1:4909792-4909811 None:intergenic 35.0%
TTGATTGTGTAGGTATGAAG+AGG - chr6_1:4910006-4910025 Msa0870490:intron 35.0%
TGATTGTGTAGGTATGAAGA+GGG - chr6_1:4910007-4910026 Msa0870490:intron 35.0%
TGGCGCAAAAACACAAAATA+GGG + chr6_1:4914863-4914882 None:intergenic 35.0%
TTGGCGCAAAAACACAAAAT+AGG + chr6_1:4914864-4914883 None:intergenic 35.0%
CAGCAGTGAAACACAAAATT+AGG + chr6_1:4914922-4914941 None:intergenic 35.0%
CAACAGCGAAACACAAAATT+AGG + chr6_1:4915062-4915081 None:intergenic 35.0%
ACCTATATCTATCTCACTTG+TGG - chr6_1:4915104-4915123 Msa0870490:intron 35.0%
ACCACAAGTGAGATAGATAT+AGG + chr6_1:4915108-4915127 None:intergenic 35.0%
TGTGTATGAAGATATGGTCA+AGG - chr6_1:4915398-4915417 Msa0870490:CDS 35.0%
!! ATTGGTTGTCAATTTTTGGG+AGG + chr6_1:4915483-4915502 None:intergenic 35.0%
GTCTTTCACTTCCTTCAAAT+AGG + chr6_1:4915516-4915535 None:intergenic 35.0%
TGAAATCTTTCATGACCTCA+AGG + chr6_1:4915574-4915593 None:intergenic 35.0%
TGAGGTCATGAAAGATTTCA+AGG - chr6_1:4915574-4915593 Msa0870490:intron 35.0%
AACGTTGTGCCTAAATAATC+AGG - chr6_1:4915651-4915670 Msa0870490:intron 35.0%
ACGTTGTGCCTAAATAATCA+GGG - chr6_1:4915652-4915671 Msa0870490:intron 35.0%
AGGGTTAAGGAACTATTCAA+AGG - chr6_1:4915734-4915753 Msa0870490:intron 35.0%
!! GGTCACAACCATTTGATTTT+TGG - chr6_1:4915755-4915774 Msa0870490:intron 35.0%
ATTTAACACTTTCCTGCCAA+AGG - chr6_1:4915778-4915797 Msa0870490:intron 35.0%
TTTAACACTTTCCTGCCAAA+GGG - chr6_1:4915779-4915798 Msa0870490:intron 35.0%
AGTGTTATCTCATATCCCTT+TGG + chr6_1:4915797-4915816 None:intergenic 35.0%
!! GATTCGTAGCTTTAATTGGT+TGG - chr6_1:4915954-4915973 Msa0870490:intron 35.0%
!! TCATTTTGGAAACGTTTCTG+TGG + chr6_1:4915988-4916007 None:intergenic 35.0%
ATCTCCATGCGACTTAAAAA+GGG + chr6_1:4916208-4916227 None:intergenic 35.0%
AATCTCCATGCGACTTAAAA+AGG + chr6_1:4916209-4916228 None:intergenic 35.0%
TGCATTGAATTTCGACCAAA+TGG + chr6_1:4916294-4916313 None:intergenic 35.0%
CACGATCATGAGAAGAAAAT+CGG + chr6_1:4916473-4916492 None:intergenic 35.0%
! AACATGATCTTGATAACAGC+AGG - chr6_1:4916607-4916626 Msa0870490:CDS 35.0%
! ACATGATCTTGATAACAGCA+GGG - chr6_1:4916608-4916627 Msa0870490:CDS 35.0%
TTGAAAACATGATGGTTCAC+AGG + chr6_1:4916813-4916832 None:intergenic 35.0%
TTGACGTAGATCAATATGAG+TGG - chr6_1:4916975-4916994 Msa0870490:intron 35.0%
TAATCAAGAAAGATGCCAAC+AGG + chr6_1:4917290-4917309 None:intergenic 35.0%
CAGTTTCTGCGATAAAGTTA+AGG - chr6_1:4917421-4917440 Msa0870490:CDS 35.0%
! TAAGGCACTTCAAGAATGTT+TGG + chr6_1:4917472-4917491 None:intergenic 35.0%
ACTTATGGGATATGCAACTT+TGG - chr6_1:4917672-4917691 Msa0870490:intron 35.0%
GCTTTCATAGTGTGTATGAA+AGG - chr6_1:4917749-4917768 Msa0870490:intron 35.0%
TTCCAAGTTTAACAAGAGAC+TGG + chr6_1:4917795-4917814 None:intergenic 35.0%
! CTGATCTAGTCTCACATTTT+TGG - chr6_1:4917818-4917837 Msa0870490:intron 35.0%
ACAATCCAAAAACTAGGGTT+GGG + chr6_1:4917939-4917958 None:intergenic 35.0%
GAAGTAACATCTTCTGTTAG+TGG + chr6_1:4918001-4918020 None:intergenic 35.0%
AGAATGCTTTCCAAGCAAAT+CGG + chr6_1:4918251-4918270 None:intergenic 35.0%
!!! TGCCTATTTGTTTTTGCAGA+CGG - chr6_1:4918393-4918412 Msa0870490:intron 35.0%
TTTATCACGATCATCCAAGT+TGG - chr6_1:4918602-4918621 Msa0870490:intron 35.0%
! AAGATACAAGGAGAAGTACA+TGG - chr6_1:4918671-4918690 Msa0870490:intron 35.0%
! AGATACAAGGAGAAGTACAT+GGG - chr6_1:4918672-4918691 Msa0870490:intron 35.0%
CTGAAATGAACATTGCATTC+AGG + chr6_1:4919041-4919060 None:intergenic 35.0%
! ATATAGTGTGTCGACATTGT+TGG - chr6_1:4919081-4919100 Msa0870490:intron 35.0%
CAGTGAAGTGATCTTCAATA+CGG + chr6_1:4919248-4919267 None:intergenic 35.0%
TAAATTGGTTGCGAGTTTAG+TGG - chr6_1:4919682-4919701 Msa0870490:intron 35.0%
TGTTTGGCAATATACAGCTT+TGG - chr6_1:4919738-4919757 Msa0870490:intron 35.0%
GAAAAGTCAAACTCGAAATG+TGG + chr6_1:4919853-4919872 None:intergenic 35.0%
ACTTGTTCGTTATTCATGTG+AGG - chr6_1:4919903-4919922 Msa0870490:intron 35.0%
TTGAATTGGACTCTCTGTTA+GGG + chr6_1:4920101-4920120 None:intergenic 35.0%
!! AGATTTTGGTAGCCTTGAAT+TGG + chr6_1:4920115-4920134 None:intergenic 35.0%
TCTGACAAGAATGAAGTTGA+TGG - chr6_1:4920132-4920151 Msa0870490:intron 35.0%
!! AATGAAGTTGATGGTAGAGT+AGG - chr6_1:4920141-4920160 Msa0870490:intron 35.0%
GTGAAGTTAAAAATGGTCAC+CGG - chr6_1:4920163-4920182 Msa0870490:intron 35.0%
GCTGCCAATGATAAAGAAAA+CGG - chr6_1:4920195-4920214 Msa0870490:intron 35.0%
GATAAAGAAAACGGTTCTCT+TGG - chr6_1:4920204-4920223 Msa0870490:intron 35.0%
GAACTGTTTAACAAATCCAG+GGG + chr6_1:4920304-4920323 None:intergenic 35.0%
GAGAACTGTTTAACAAATCC+AGG + chr6_1:4920306-4920325 None:intergenic 35.0%
AGATAAAAGGAACTCGACAT+TGG + chr6_1:4920648-4920667 None:intergenic 35.0%
! ATGGAACATGATGATGTTGA+TGG - chr6_1:4921192-4921211 Msa0870490:intron 35.0%
TTGAAGATGTGAAGGATTCA+AGG - chr6_1:4921358-4921377 Msa0870490:intron 35.0%
TGAAGATGTGAAGGATTCAA+GGG - chr6_1:4921359-4921378 Msa0870490:intron 35.0%
!!! AAGGATTCAAGGGTGTTTTA+CGG - chr6_1:4921369-4921388 Msa0870490:intron 35.0%
CTTGCCAGATTCTTTATGAA+AGG - chr6_1:4921507-4921526 Msa0870490:intron 35.0%
!! GCATTGTATAATTTGCTCGA+TGG - chr6_1:4921743-4921762 Msa0870490:intron 35.0%
ATCTTCAAACTTGGCATTCT+CGG + chr6_1:4921774-4921793 None:intergenic 35.0%
TCGACATTCATCTTCAAACT+TGG + chr6_1:4921783-4921802 None:intergenic 35.0%
ATGTGAATAGCACATAAGAC+TGG + chr6_1:4921820-4921839 None:intergenic 35.0%
! GTCTTATGTGCTATTCACAT+TGG - chr6_1:4921820-4921839 Msa0870490:intron 35.0%
TTCATGAGGAGAACATATAC+CGG - chr6_1:4922079-4922098 Msa0870490:intron 35.0%
!! ATATACCGGTTTCAATCTGT+AGG - chr6_1:4922093-4922112 Msa0870490:intron 35.0%
AAGTAGAAAACAAATGCTCC+AGG + chr6_1:4922129-4922148 None:intergenic 35.0%
CTCAGAAACAAACCGAAATA+TGG - chr6_1:4922537-4922556 Msa0870490:intron 35.0%
CAGAAACAAACCGAAATATG+GGG - chr6_1:4922539-4922558 Msa0870490:intron 35.0%
TCATCTAAGTCCCCATATTT+CGG + chr6_1:4922552-4922571 None:intergenic 35.0%
TTCTGCAATTTGTGCTGTAA+TGG - chr6_1:4922575-4922594 Msa0870490:intron 35.0%
! CTTGTGATTTTCCATTTTGC+AGG - chr6_1:4922678-4922697 Msa0870490:intron 35.0%
CAAGTTTCCAGACTAAACAA+CGG + chr6_1:4922935-4922954 None:intergenic 35.0%
!! AAGCTTTCGGTTGTTTTCAT+TGG + chr6_1:4923150-4923169 None:intergenic 35.0%
!!! ATTTTTTCTTCCGACCAAGA+AGG - chr6_1:4923371-4923390 Msa0870490:intron 35.0%
!! GATGTACTTGATGATGATGA+TGG + chr6_1:4923409-4923428 None:intergenic 35.0%
TGAATTTACAGTTTAGGTGG+AGG + chr6_1:4923485-4923504 None:intergenic 35.0%
CCATGAATTTACAGTTTAGG+TGG + chr6_1:4923488-4923507 None:intergenic 35.0%
CCACCTAAACTGTAAATTCA+TGG - chr6_1:4923485-4923504 Msa0870490:intron 35.0%
TTCATACAAGAGTCTTGATG+TGG - chr6_1:4923536-4923555 Msa0870490:intron 35.0%
CATATGAAAAAGTGAAGGAG+GGG - chr6_1:4923615-4923634 Msa0870490:intron 35.0%
AAGGAGGGGAATATTCATAT+AGG - chr6_1:4923629-4923648 Msa0870490:intron 35.0%
ATGTGTGTGTAATCTGTATG+AGG - chr6_1:4923653-4923672 Msa0870490:intron 35.0%
ACCACATAACCTTCTTAGAA+GGG + chr6_1:4923798-4923817 None:intergenic 35.0%
AACCACATAACCTTCTTAGA+AGG + chr6_1:4923799-4923818 None:intergenic 35.0%
GGAATGTGGAAGTAGAAGTA+GGG - chr6_1:4909048-4909067 Msa0870490:three_prime_UTR 40.0%
GATGAACTTCCTTGATCCAA+CGG - chr6_1:4909385-4909404 Msa0870490:exon 40.0%
! GAGAGAAAGAGAGAGAGTTT+TGG + chr6_1:4909639-4909658 None:intergenic 40.0%
GATGACCCAGAAAGTGAAAA+GGG + chr6_1:4909868-4909887 None:intergenic 40.0%
AGATGACCCAGAAAGTGAAA+AGG + chr6_1:4909869-4909888 None:intergenic 40.0%
TCTCAATTCAAACGACCCTA+TGG - chr6_1:4910059-4910078 Msa0870490:intron 40.0%
! AGGACTCGTTTGGTTTCAAA+AGG + chr6_1:4910475-4910494 None:intergenic 40.0%
ACAATTTACTCCAACGTGGA+AGG + chr6_1:4910495-4910514 None:intergenic 40.0%
AGCAACAATTTACTCCAACG+TGG + chr6_1:4910499-4910518 None:intergenic 40.0%
AAAAGTTTAGGGAGAAGTGG+GGG - chr6_1:4910578-4910597 Msa0870490:CDS 40.0%
GTTCAAACCTCTGACACAAT+TGG - chr6_1:4910819-4910838 Msa0870490:CDS 40.0%
CAATCTACCAATTGTGTCAG+AGG + chr6_1:4910829-4910848 None:intergenic 40.0%
! GCAATGTTTCTATGAGGACT+AGG + chr6_1:4911650-4911669 None:intergenic 40.0%
! AAGCCACAAAAACCACGTTT+TGG - chr6_1:4911699-4911718 Msa0870490:CDS 40.0%
! TTGCCAAAACGTGGTTTTTG+TGG + chr6_1:4911705-4911724 None:intergenic 40.0%
AATCACGGTGAAAATGGCAT+TGG - chr6_1:4911749-4911768 Msa0870490:CDS 40.0%
ATCACGGTGAAAATGGCATT+GGG - chr6_1:4911750-4911769 Msa0870490:CDS 40.0%
!!! ACTCTTTTTTCTGGTGACTG+AGG + chr6_1:4911842-4911861 None:intergenic 40.0%
! ATTTATGCTAGCTTCGTCGT+TGG + chr6_1:4912497-4912516 None:intergenic 40.0%
TTATGCAGGGCCAAATTCAA+AGG - chr6_1:4912518-4912537 Msa0870490:CDS 40.0%
GTTATTGGGTGAAACTTGTG+TGG + chr6_1:4913306-4913325 None:intergenic 40.0%
ATCGGTTGAGACAAGACTAA+TGG - chr6_1:4914114-4914133 Msa0870490:intron 40.0%
TCGGTTGAGACAAGACTAAT+GGG - chr6_1:4914115-4914134 Msa0870490:intron 40.0%
! GAGAGAAAGAGAGAGAGTTT+TGG + chr6_1:4909639-4909658 None:intergenic 40.0%
TCCTTGTGTGCATGTATTTG+TGG - chr6_1:4915280-4915299 Msa0870490:intron 40.0%
TCCACAAATACATGCACACA+AGG + chr6_1:4915284-4915303 None:intergenic 40.0%
GGAAGTGAAAGACATGTTTC+AGG - chr6_1:4915523-4915542 Msa0870490:intron 40.0%
CGTTGTGCCTAAATAATCAG+GGG - chr6_1:4915653-4915672 Msa0870490:intron 40.0%
TTATCTCATATCCCTTTGGC+AGG + chr6_1:4915793-4915812 None:intergenic 40.0%
GATAACACTTGATGAGGATG+AGG - chr6_1:4915808-4915827 Msa0870490:intron 40.0%
! AATTCAACCGTTTTCTTCGG+AGG + chr6_1:4915842-4915861 None:intergenic 40.0%
AACTAACTCGGTAACTGGAA+TGG + chr6_1:4915921-4915940 None:intergenic 40.0%
CTCACTATAAACCTCAGTGA+TGG + chr6_1:4916070-4916089 None:intergenic 40.0%
CATCACTGAGGTTTATAGTG+AGG - chr6_1:4916068-4916087 Msa0870490:intron 40.0%
!! GAAGGTGCTGAAGAATTATC+TGG + chr6_1:4916258-4916277 None:intergenic 40.0%
! GTTTTGTCATCATCCAGATC+AGG + chr6_1:4916513-4916532 None:intergenic 40.0%
GCTGCTCATGATGATAAAGA+TGG - chr6_1:4916696-4916715 Msa0870490:intron 40.0%
TGCCAGTCTCTTGTTAAACT+TGG - chr6_1:4917790-4917809 Msa0870490:intron 40.0%
!! AAGTTCCCAACCCTAGTTTT+TGG - chr6_1:4917931-4917950 Msa0870490:intron 40.0%
GACAATCCAAAAACTAGGGT+TGG + chr6_1:4917940-4917959 None:intergenic 40.0%
GAAGGTTATTCAAACATCCC+AGG + chr6_1:4917976-4917995 None:intergenic 40.0%
TGGAGTCAATAGAACTCACA+AGG + chr6_1:4918189-4918208 None:intergenic 40.0%
!!! GCCTATTTGTTTTTGCAGAC+GGG - chr6_1:4918394-4918413 Msa0870490:intron 40.0%
ACCCGTCTGCAAAAACAAAT+AGG + chr6_1:4918398-4918417 None:intergenic 40.0%
! TTTTACTCATGACACCAGCA+AGG + chr6_1:4918422-4918441 None:intergenic 40.0%
GCTAAGGTCAAGTTCTTGAA+TGG + chr6_1:4918703-4918722 None:intergenic 40.0%
TTGGATACTGCAAGAACACA+AGG + chr6_1:4918845-4918864 None:intergenic 40.0%
!! GCAAGTACTGAATGATCACT+GGG - chr6_1:4918899-4918918 Msa0870490:intron 40.0%
ACTCTTTCAAACATATGCGC+AGG - chr6_1:4918949-4918968 Msa0870490:intron 40.0%
TGTTCAGATGTGAAGATGAC+AGG - chr6_1:4918991-4919010 Msa0870490:intron 40.0%
TCGACATTGTTGGCATTTAG+AGG - chr6_1:4919091-4919110 Msa0870490:intron 40.0%
TTTCTGATGTAGGTTTGAGC+TGG - chr6_1:4919128-4919147 Msa0870490:intron 40.0%
CGTATTGAAGATCACTTCAC+TGG - chr6_1:4919246-4919265 Msa0870490:intron 40.0%
! TGTCTAAGACATCAAGACCA+TGG + chr6_1:4919419-4919438 None:intergenic 40.0%
TCGATTGAAGCAGAAACAAG+AGG - chr6_1:4919482-4919501 Msa0870490:intron 40.0%
AGAAACAAGAGGAGTGGAAT+AGG - chr6_1:4919493-4919512 Msa0870490:intron 40.0%
TAAAGAGAAGCAGCAGAAAG+AGG - chr6_1:4919780-4919799 Msa0870490:intron 40.0%
AACTCGAAATGTGGAATGAG+AGG + chr6_1:4919844-4919863 None:intergenic 40.0%
TTCTGATGCTGAAATTCACG+AGG - chr6_1:4919870-4919889 Msa0870490:intron 40.0%
CTTGAATTGGACTCTCTGTT+AGG + chr6_1:4920102-4920121 None:intergenic 40.0%
CTAACAGAGAGTCCAATTCA+AGG - chr6_1:4920100-4920119 Msa0870490:intron 40.0%
AAAGAAAACGGTTCTCTTGG+TGG - chr6_1:4920207-4920226 Msa0870490:intron 40.0%
TCTGCATCTGTCACAATTAG+AGG - chr6_1:4920348-4920367 Msa0870490:intron 40.0%
ACTATGTTGTATACGGACCT+GGG + chr6_1:4920395-4920414 None:intergenic 40.0%
AACTATGTTGTATACGGACC+TGG + chr6_1:4920396-4920415 None:intergenic 40.0%
ATAGAGACATCAGCATCAGT+AGG + chr6_1:4920556-4920575 None:intergenic 40.0%
! ACCAAAGGTACATTAGCACT+CGG + chr6_1:4920601-4920620 None:intergenic 40.0%
AACTCGACATTGGACATAGA+TGG + chr6_1:4920638-4920657 None:intergenic 40.0%
AAGGCTATGTTTGGGTCAAA+CGG + chr6_1:4920731-4920750 None:intergenic 40.0%
CTTCGACTAAGGCTATGTTT+GGG + chr6_1:4920739-4920758 None:intergenic 40.0%
! CAAACATAGCCTTAGTCGAA+GGG - chr6_1:4920738-4920757 Msa0870490:intron 40.0%
GAGGATAACTTTGTTGCCTA+TGG - chr6_1:4920958-4920977 Msa0870490:intron 40.0%
CTGTGCATTTGAATCTCCAT+AGG + chr6_1:4920977-4920996 None:intergenic 40.0%
CAAACCACAATGACGATAGA+AGG - chr6_1:4920998-4921017 Msa0870490:intron 40.0%
!! AGCGAAAATGTTTCTGAAGC+TGG - chr6_1:4921102-4921121 Msa0870490:intron 40.0%
AGATCATGAGGAGGAAGATA+TGG - chr6_1:4921173-4921192 Msa0870490:intron 40.0%
CATCTTTACCGTTATCAGAG+AGG - chr6_1:4921283-4921302 Msa0870490:intron 40.0%
GACAGAAACCTCTCTGATAA+CGG + chr6_1:4921294-4921313 None:intergenic 40.0%
!! CAACAAGCGCTGAAATGAAA+TGG - chr6_1:4921552-4921571 Msa0870490:intron 40.0%
GATGAATGTCGAGCAATTCT+TGG - chr6_1:4921791-4921810 Msa0870490:intron 40.0%
TATGAAAAGTCTCGGAAACC+TGG - chr6_1:4922012-4922031 Msa0870490:intron 40.0%
ATGAAAAGTCTCGGAAACCT+GGG - chr6_1:4922013-4922032 Msa0870490:intron 40.0%
TGCACATGTTATCCTTCATG+AGG - chr6_1:4922065-4922084 Msa0870490:intron 40.0%
GGTATATGTTCTCCTCATGA+AGG + chr6_1:4922080-4922099 None:intergenic 40.0%
AAGGACCTACAGATTGAAAC+CGG + chr6_1:4922101-4922120 None:intergenic 40.0%
ACAAATGCTCCAGGTTACAA+AGG + chr6_1:4922120-4922139 None:intergenic 40.0%
CATTCATATTGTCCATGAGC+TGG + chr6_1:4922248-4922267 None:intergenic 40.0%
!! ACTGGAAAGGTGCATCTTTT+AGG - chr6_1:4922374-4922393 Msa0870490:intron 40.0%
!! CTGGAAAGGTGCATCTTTTA+GGG - chr6_1:4922375-4922394 Msa0870490:intron 40.0%
GATATCTTGCAACTCATCCA+AGG - chr6_1:4922632-4922651 Msa0870490:intron 40.0%
! ATGTGTCATTATGAACCCTC+TGG - chr6_1:4922995-4923014 Msa0870490:intron 40.0%
! TTCGTCTTTTCCTTCTTGGT+CGG + chr6_1:4923384-4923403 None:intergenic 40.0%
CATCAAGTACATCAGCTTCT+CGG - chr6_1:4923416-4923435 Msa0870490:intron 40.0%
GGAAAGATTCCGCAAATTGA+TGG - chr6_1:4923456-4923475 Msa0870490:intron 40.0%
! TTGCTTCAACCCTTCTAAGA+AGG - chr6_1:4923786-4923805 Msa0870490:CDS 40.0%
! ACCCTTCTAAGAAGGTTATG+TGG - chr6_1:4923794-4923813 Msa0870490:CDS 40.0%
GATGGGTGAGAATTTCGACT+GGG - chr6_1:4909027-4909046 Msa0870490:three_prime_UTR 45.0%
GAGAATTTCGACTGGGAATG+TGG - chr6_1:4909034-4909053 Msa0870490:three_prime_UTR 45.0%
GGGAATGTGGAAGTAGAAGT+AGG - chr6_1:4909047-4909066 Msa0870490:three_prime_UTR 45.0%
TGGAAATGGGGAAGAAGAAC+AGG - chr6_1:4909086-4909105 Msa0870490:three_prime_UTR 45.0%
TTGGTCAATTAGCGTGTCTC+TGG - chr6_1:4909130-4909149 Msa0870490:three_prime_UTR 45.0%
!! TTCAGATACTTGGGTGTTGG+TGG - chr6_1:4909347-4909366 Msa0870490:three_prime_UTR 45.0%
AACTTCCTTGATCCAACGGT+AGG - chr6_1:4909389-4909408 Msa0870490:exon 45.0%
ACTTCCTTGATCCAACGGTA+GGG - chr6_1:4909390-4909409 Msa0870490:exon 45.0%
AAATCCCTACCGTTGGATCA+AGG + chr6_1:4909397-4909416 None:intergenic 45.0%
GTAAACGGAAGAGGACTTAC+AGG - chr6_1:4909443-4909462 Msa0870490:CDS 45.0%
! TTTGGTGTGAGAGAAAACGG+TGG + chr6_1:4909621-4909640 None:intergenic 45.0%
CGAGTACCATGTGAGAGATT+TGG - chr6_1:4910417-4910436 Msa0870490:intron 45.0%
! AAGTGTGTTTGGAATACCGG+TGG - chr6_1:4911675-4911694 Msa0870490:CDS 45.0%
! TGGTTTTTGTGGCTTTCCAC+CGG + chr6_1:4911694-4911713 None:intergenic 45.0%
!! AACCACGTTTTGGCAAAAGC+TGG - chr6_1:4911709-4911728 Msa0870490:CDS 45.0%
! TTCCAGCTTTTGCCAAAACG+TGG + chr6_1:4911714-4911733 None:intergenic 45.0%
! TCACCGTGATTTTGTGAAGC+TGG + chr6_1:4911740-4911759 None:intergenic 45.0%
TTTCATGCGGACACGCTAAT+AGG + chr6_1:4912337-4912356 None:intergenic 45.0%
TCATTGGCATGAGGTAGTCA+TGG + chr6_1:4913260-4913279 None:intergenic 45.0%
TGACTACCTCATGCCAATGA+AGG - chr6_1:4913260-4913279 Msa0870490:CDS 45.0%
GACTACCTCATGCCAATGAA+GGG - chr6_1:4913261-4913280 Msa0870490:CDS 45.0%
! TTGAGACAAGACTAATGGGC+CGG - chr6_1:4914119-4914138 Msa0870490:CDS 45.0%
! TTTGGTGTGAGAGAAAACGG+TGG + chr6_1:4909621-4909640 None:intergenic 45.0%
TCACCACGTGATGAAGCATA+GGG + chr6_1:4914765-4914784 None:intergenic 45.0%
ATCACCACGTGATGAAGCAT+AGG + chr6_1:4914766-4914785 None:intergenic 45.0%
!! ACACTACTGGTGTCATAGCA+AGG - chr6_1:4915714-4915733 Msa0870490:intron 45.0%
!! CACTACTGGTGTCATAGCAA+GGG - chr6_1:4915715-4915734 Msa0870490:intron 45.0%
!! TGGTGTCATAGCAAGGGTTA+AGG - chr6_1:4915721-4915740 Msa0870490:intron 45.0%
CGGTAAACTAACTCGGTAAC+TGG + chr6_1:4915926-4915945 None:intergenic 45.0%
!!! GCTACCCTTTTTAAGTCGCA+TGG - chr6_1:4916201-4916220 Msa0870490:CDS 45.0%
GCGGCAAATGCAAGTAGATA+AGG - chr6_1:4916350-4916369 Msa0870490:CDS 45.0%
TGAACTTTCACAAGGAGCAG+AGG - chr6_1:4916538-4916557 Msa0870490:CDS 45.0%
GAATGATGCAGTCCCATGTT+TGG - chr6_1:4917182-4917201 Msa0870490:intron 45.0%
GTTGCTCCCTTTAGATCTCT+AGG - chr6_1:4917577-4917596 Msa0870490:intron 45.0%
!! TTGTCATTCTGGTTTGTGCC+TGG - chr6_1:4917955-4917974 Msa0870490:intron 45.0%
!! TGTCATTCTGGTTTGTGCCT+GGG - chr6_1:4917956-4917975 Msa0870490:intron 45.0%
CATCTTCTGTTAGTGGCTGA+AGG + chr6_1:4917994-4918013 None:intergenic 45.0%
!! TTTCAGGTGACCGATTTGCT+TGG - chr6_1:4918238-4918257 Msa0870490:intron 45.0%
ATAGGCACAAGAAAACCCCA+AGG + chr6_1:4918380-4918399 None:intergenic 45.0%
AAATGACCATCAGCAGCAAG+TGG + chr6_1:4918585-4918604 None:intergenic 45.0%
! ATCACGATCATCCAAGTTGG+AGG - chr6_1:4918605-4918624 Msa0870490:intron 45.0%
ATGTTCTCTGTCCTCCAACT+TGG + chr6_1:4918619-4918638 None:intergenic 45.0%
AGTTGGAGGACAGAGAACAT+AGG - chr6_1:4918619-4918638 Msa0870490:intron 45.0%
AACAACGTTTGCAGTCGCTA+AGG + chr6_1:4918719-4918738 None:intergenic 45.0%
TGAAAGTTACGTACATCGGC+CGG + chr6_1:4918762-4918781 None:intergenic 45.0%
TGCAAGAACACAAGGTGTGA+AGG + chr6_1:4918837-4918856 None:intergenic 45.0%
!! CGCAAGTACTGAATGATCAC+TGG - chr6_1:4918898-4918917 Msa0870490:intron 45.0%
GAAAGAGTAATCCTCGCTTC+CGG + chr6_1:4918937-4918956 None:intergenic 45.0%
AGGTGCATTGAACGCCTATA+TGG - chr6_1:4919390-4919409 Msa0870490:intron 45.0%
CAAGACCATGGTCACCATAT+AGG + chr6_1:4919407-4919426 None:intergenic 45.0%
TTACAGGCAGAGCATGAGTT+GGG + chr6_1:4919455-4919474 None:intergenic 45.0%
ATTACAGGCAGAGCATGAGT+TGG + chr6_1:4919456-4919475 None:intergenic 45.0%
TGAAGCAGAAACAAGAGGAG+TGG - chr6_1:4919487-4919506 Msa0870490:intron 45.0%
ATCGTTCAGACTATTGCTGC+AGG - chr6_1:4919808-4919827 Msa0870490:intron 45.0%
TGGGAAGTTACACCAAGCAT+CGG + chr6_1:4919991-4920010 None:intergenic 45.0%
AACTTCCCAATCGCATGAGT+CGG - chr6_1:4920002-4920021 Msa0870490:intron 45.0%
AGTTCTGTTGCACCTAACGT+AGG - chr6_1:4920063-4920082 Msa0870490:intron 45.0%
CTATGTTGTATACGGACCTG+GGG + chr6_1:4920394-4920413 None:intergenic 45.0%
AGACATCAGCATCAGTAGGT+CGG + chr6_1:4920552-4920571 None:intergenic 45.0%
TACATTAGCACTCGGAGACT+TGG + chr6_1:4920593-4920612 None:intergenic 45.0%
TCCGAGTGCTAATGTACCTT+TGG - chr6_1:4920597-4920616 Msa0870490:intron 45.0%
GAGTGCTAATGTACCTTTGG+TGG - chr6_1:4920600-4920619 Msa0870490:intron 45.0%
TGCTAATGTACCTTTGGTGG+AGG - chr6_1:4920603-4920622 Msa0870490:intron 45.0%
GAAACTCATACCTCCACCAA+AGG + chr6_1:4920616-4920635 None:intergenic 45.0%
CCTTCGACTAAGGCTATGTT+TGG + chr6_1:4920740-4920759 None:intergenic 45.0%
! CCAAACATAGCCTTAGTCGA+AGG - chr6_1:4920737-4920756 Msa0870490:intron 45.0%
!! TGTCGGCTTATCTCTGTCTT+AGG - chr6_1:4920795-4920814 Msa0870490:intron 45.0%
! GTCGGCTTATCTCTGTCTTA+GGG - chr6_1:4920796-4920815 Msa0870490:intron 45.0%
GTTCTCAACTAACACGCCAT+TGG + chr6_1:4920851-4920870 None:intergenic 45.0%
ATACGAGTCTAGAAATGGGG+AGG - chr6_1:4921023-4921042 Msa0870490:intron 45.0%
TGTGATGCTGATGCACAAAC+TGG - chr6_1:4921249-4921268 Msa0870490:intron 45.0%
GATGCACAAACTGGAGTAGA+TGG - chr6_1:4921258-4921277 Msa0870490:intron 45.0%
GCAGATACATGCTTTGTGAG+AGG + chr6_1:4921327-4921346 None:intergenic 45.0%
GTTCTACAGATCCTTACGCA+AGG - chr6_1:4921591-4921610 Msa0870490:intron 45.0%
TACAGGATGTACCTTGCGTA+AGG + chr6_1:4921605-4921624 None:intergenic 45.0%
TTCAAACTTGGCATTCTCGG+CGG + chr6_1:4921771-4921790 None:intergenic 45.0%
! ACAGTTTGAAGCTGCAGTGT+AGG + chr6_1:4921949-4921968 None:intergenic 45.0%
TCAAACTGTTGCAACCGATG+AGG - chr6_1:4921960-4921979 Msa0870490:intron 45.0%
AAGCTTAGCGTCTTCCTCAT+CGG + chr6_1:4921977-4921996 None:intergenic 45.0%
TCTGTAGGTCCTTTGTAACC+TGG - chr6_1:4922108-4922127 Msa0870490:intron 45.0%
AACAGCAACAGCAGCAATCT+CGG + chr6_1:4922277-4922296 None:intergenic 45.0%
CTTTCCAGTAAAATGCCGTG+AGG + chr6_1:4922363-4922382 None:intergenic 45.0%
! CTCACGGCATTTTACTGGAA+AGG - chr6_1:4922361-4922380 Msa0870490:intron 45.0%
TGTGCAACCGTTGTTTAGTC+TGG - chr6_1:4922925-4922944 Msa0870490:intron 45.0%
! CTCAGGTGCTACAAGAACTA+CGG + chr6_1:4922970-4922989 None:intergenic 45.0%
! GGTGTTCGTCTTTTCCTTCT+TGG + chr6_1:4923388-4923407 None:intergenic 45.0%
TCTTGATGTGGCAACAACCT+AGG - chr6_1:4923548-4923567 Msa0870490:intron 45.0%
!!! ATAAAAAAATTCTAAAAAAT+TGG + chr6_1:4909243-4909262 None:intergenic 5.0%
!! AAATAAAAAAATCTAAAAAT+TGG + chr6_1:4909283-4909302 None:intergenic 5.0%
!!! TATTTCTAAATTAATATAAA+TGG - chr6_1:4909298-4909317 Msa0870490:three_prime_UTR 5.0%
!! CTAAAATTAAATAAAATATT+AGG - chr6_1:4912709-4912728 Msa0870490:CDS 5.0%
!! AATAATTATTTAAAAAAGTT+GGG - chr6_1:4912872-4912891 Msa0870490:CDS 5.0%
!!! ATCTTAATATTATTTATTTT+TGG - chr6_1:4915676-4915695 Msa0870490:intron 5.0%
!!! ATTTTTTTGTTTAAAAAAAT+TGG - chr6_1:4916139-4916158 Msa0870490:intron 5.0%
GGATGGGTGAGAATTTCGAC+TGG - chr6_1:4909026-4909045 Msa0870490:three_prime_UTR 50.0%
!! ACTTGGGTGTTGGTGGTACA+CGG - chr6_1:4909354-4909373 Msa0870490:three_prime_UTR 50.0%
! CAAGATGGGTTTGATCGGAG+AGG + chr6_1:4909777-4909796 None:intergenic 50.0%
!! GAGGGGGGGCTTTAAAAAGT+AGG - chr6_1:4910600-4910619 Msa0870490:CDS 50.0%
GTTCACGGGTATGGACACAA+AGG + chr6_1:4910866-4910885 None:intergenic 50.0%
! CAAGATGGGTTTGATCGGAG+AGG + chr6_1:4909777-4909796 None:intergenic 50.0%
TGAAGATATGGTCAAGGCCC+CGG - chr6_1:4915404-4915423 Msa0870490:CDS 50.0%
GTTTCCAGGACTGACACTAC+TGG - chr6_1:4915701-4915720 Msa0870490:intron 50.0%
CGAAGCTCCTCCGAAGAAAA+CGG - chr6_1:4915832-4915851 Msa0870490:intron 50.0%
AGAGCACAAGACCATCACTG+AGG - chr6_1:4916056-4916075 Msa0870490:intron 50.0%
AATGGAGCATGCTGTGTGGA+AGG + chr6_1:4916276-4916295 None:intergenic 50.0%
TCCACACAGCATGCTCCATT+TGG - chr6_1:4916276-4916295 Msa0870490:CDS 50.0%
ACCAAATGGAGCATGCTGTG+TGG + chr6_1:4916280-4916299 None:intergenic 50.0%
TACTTGCATTTGCCGCATCC+CGG + chr6_1:4916346-4916365 None:intergenic 50.0%
!! GAGTGTTGAACGTCCTGATC+TGG - chr6_1:4916497-4916516 Msa0870490:intron 50.0%
! TTAGAGCCACTTGCTGCTGA+TGG - chr6_1:4918576-4918595 Msa0870490:intron 50.0%
CAGAGAACATAGGCGTGAGA+CGG - chr6_1:4918629-4918648 Msa0870490:intron 50.0%
GACGGATGGAGGTAAAGAGA+AGG - chr6_1:4918647-4918666 Msa0870490:intron 50.0%
! CGCTGACTAGCAGTAGGAAT+TGG + chr6_1:4918864-4918883 None:intergenic 50.0%
! TCAGATCGCTGACTAGCAGT+AGG + chr6_1:4918870-4918889 None:intergenic 50.0%
CACTGGGTATCTGTGACTTC+CGG - chr6_1:4918915-4918934 Msa0870490:intron 50.0%
GAACGCCTATATGGTGACCA+TGG - chr6_1:4919399-4919418 Msa0870490:intron 50.0%
ACCTTCTTGGAACCGATGCT+TGG - chr6_1:4919976-4919995 Msa0870490:intron 50.0%
!! ACCAAGCATCGGTTCCAAGA+AGG + chr6_1:4919980-4919999 None:intergenic 50.0%
CCTTTCCGACTCATGCGATT+GGG + chr6_1:4920010-4920029 None:intergenic 50.0%
CCAATCGCATGAGTCGGAAA+GGG - chr6_1:4920008-4920027 Msa0870490:intron 50.0%
TCTGTTGCACCTAACGTAGG+AGG - chr6_1:4920066-4920085 Msa0870490:intron 50.0%
CTTCCATCACCTCCTACGTT+AGG + chr6_1:4920078-4920097 None:intergenic 50.0%
CATTGGCAGCTACACTAGTC+CGG + chr6_1:4920185-4920204 None:intergenic 50.0%
GAAAGCAGTGATAAAGCCCC+TGG - chr6_1:4920285-4920304 Msa0870490:intron 50.0%
GACATCAGCATCAGTAGGTC+GGG + chr6_1:4920551-4920570 None:intergenic 50.0%
TCCTCCTCAGAGTCAGCATT+CGG + chr6_1:4920943-4920962 None:intergenic 50.0%
TCATTATCACCTCCAGCCTC+TGG + chr6_1:4921060-4921079 None:intergenic 50.0%
GAAGCTGGTGAAGATGTGTC+AGG - chr6_1:4921117-4921136 Msa0870490:intron 50.0%
TTCCTCCTCATGATCTTCCC+GGG + chr6_1:4921169-4921188 None:intergenic 50.0%
CTTCCTCCTCATGATCTTCC+CGG + chr6_1:4921170-4921189 None:intergenic 50.0%
GATGGTAAAGCCGAGAGTGA+AGG - chr6_1:4921210-4921229 Msa0870490:intron 50.0%
CTCTGCTTCACCTTCACTCT+CGG + chr6_1:4921223-4921242 None:intergenic 50.0%
GAGAGTGAAGGTGAAGCAGA+GGG - chr6_1:4921222-4921241 Msa0870490:intron 50.0%
AGAGTGAAGGTGAAGCAGAG+GGG - chr6_1:4921223-4921242 Msa0870490:intron 50.0%
TGCAGTCGTCTAGTCCTTCT+CGG - chr6_1:4922214-4922233 Msa0870490:intron 50.0%
ACAGCAACAGCAGCAATCTC+GGG + chr6_1:4922276-4922295 None:intergenic 50.0%
! GATTTTCTGTCTGTCCTCCC+TGG - chr6_1:4922327-4922346 Msa0870490:intron 50.0%
! AGGTGCTACAAGAACTACGG+TGG + chr6_1:4922967-4922986 None:intergenic 50.0%
TGGAGGACGCCATCAATTTG+CGG + chr6_1:4923468-4923487 None:intergenic 50.0%
CCAACGTGGAAGGACTCGTT+TGG + chr6_1:4910485-4910504 None:intergenic 55.0%
CCAAACGAGTCCTTCCACGT+TGG - chr6_1:4910482-4910501 Msa0870490:intron 55.0%
AGTTTAGGGAGAAGTGGGGG+AGG - chr6_1:4910581-4910600 Msa0870490:CDS 55.0%
GTTTAGGGAGAAGTGGGGGA+GGG - chr6_1:4910582-4910601 Msa0870490:CDS 55.0%
TTTAGGGAGAAGTGGGGGAG+GGG - chr6_1:4910583-4910602 Msa0870490:CDS 55.0%
CGGTTCCCTTCATTGGCATG+AGG + chr6_1:4913269-4913288 None:intergenic 55.0%
CGACCCTATGCTTCATCACG+TGG - chr6_1:4914759-4914778 Msa0870490:intron 55.0%
GAGTTAACGGAGGAGGAGGT+GGG - chr6_1:4915447-4915466 Msa0870490:CDS 55.0%
AGTTAACGGAGGAGGAGGTG+GGG - chr6_1:4915448-4915467 Msa0870490:CDS 55.0%
GACACCAGTAGTGTCAGTCC+TGG + chr6_1:4915708-4915727 None:intergenic 55.0%
CAATGCAGCGCCTCAATGAG+CGG - chr6_1:4916307-4916326 Msa0870490:CDS 55.0%
AATGCAGCGCCTCAATGAGC+GGG - chr6_1:4916308-4916327 Msa0870490:CDS 55.0%
CCATAGAACCCCGCTCATTG+AGG + chr6_1:4916320-4916339 None:intergenic 55.0%
CCTCAATGAGCGGGGTTCTA+TGG - chr6_1:4916317-4916336 Msa0870490:CDS 55.0%
ACTTGCATTTGCCGCATCCC+GGG + chr6_1:4916345-4916364 None:intergenic 55.0%
AGCGTGAGAGCAGGGATAGA+AGG - chr6_1:4916562-4916581 Msa0870490:CDS 55.0%
GCGTGAGAGCAGGGATAGAA+GGG - chr6_1:4916563-4916582 Msa0870490:CDS 55.0%
! TTTGCAGACGGGTTCCTTGC+TGG - chr6_1:4918405-4918424 Msa0870490:intron 55.0%
GAACATAGGCGTGAGACGGA+TGG - chr6_1:4918633-4918652 Msa0870490:intron 55.0%
!! TCCGAGCTACCGACTTCTAC+CGG - chr6_1:4918740-4918759 Msa0870490:intron 55.0%
GTACATCGGCCGGTAGAAGT+CGG + chr6_1:4918752-4918771 None:intergenic 55.0%
GCTAGTCAGCGATCTGAGCT+TGG - chr6_1:4918873-4918892 Msa0870490:intron 55.0%
ATCTGTGACTTCCGGAAGCG+AGG - chr6_1:4918923-4918942 Msa0870490:intron 55.0%
CTCGTCAGCTCGTTTAGCAG+CGG + chr6_1:4919178-4919197 None:intergenic 55.0%
!! GAGGCTCTGGAGTACCTTCT+TGG - chr6_1:4919963-4919982 Msa0870490:intron 55.0%
CCCAATCGCATGAGTCGGAA+AGG - chr6_1:4920007-4920026 Msa0870490:intron 55.0%
CCCTTTCCGACTCATGCGAT+TGG + chr6_1:4920011-4920030 None:intergenic 55.0%
GCACCTAACGTAGGAGGTGA+TGG - chr6_1:4920072-4920091 Msa0870490:intron 55.0%
AGCAGTGTGCATATGTCCCC+AGG - chr6_1:4920375-4920394 Msa0870490:intron 55.0%
!! GTCGGGTTGGAGTAAGTACG+CGG + chr6_1:4920534-4920553 None:intergenic 55.0%
TCAGCATCAGTAGGTCGGGT+TGG + chr6_1:4920547-4920566 None:intergenic 55.0%
ACTAACACGCCATTGGCCAC+TGG + chr6_1:4920844-4920863 None:intergenic 55.0%
!! ATCCCCGAATGCTGACTCTG+AGG - chr6_1:4920936-4920955 Msa0870490:intron 55.0%
CTCCTCAGAGTCAGCATTCG+GGG + chr6_1:4920941-4920960 None:intergenic 55.0%
CCTCCTCAGAGTCAGCATTC+GGG + chr6_1:4920942-4920961 None:intergenic 55.0%
TATCACCTCCAGCCTCTGGA+CGG + chr6_1:4921056-4921075 None:intergenic 55.0%
GTGTCAGGAAGTGAGTCTGC+TGG - chr6_1:4921132-4921151 Msa0870490:intron 55.0%
! CTGCTGGTGATGAATGCTCC+CGG - chr6_1:4921148-4921167 Msa0870490:intron 55.0%
! TGCTGGTGATGAATGCTCCC+GGG - chr6_1:4921149-4921168 Msa0870490:intron 55.0%
ATGCTCCCGGGAAGATCATG+AGG - chr6_1:4921161-4921180 Msa0870490:intron 55.0%
CGAGAGTGAAGGTGAAGCAG+AGG - chr6_1:4921221-4921240 Msa0870490:intron 55.0%
GTCTGTCCTCCCTGGCAAAA+AGG - chr6_1:4922335-4922354 Msa0870490:intron 55.0%
! CGTGAGGCTCCTTTTTGCCA+GGG + chr6_1:4922347-4922366 None:intergenic 55.0%
CCTGGCAAAAAGGAGCCTCA+CGG - chr6_1:4922345-4922364 Msa0870490:intron 55.0%
! GGAGCCTCACGGCATTTTAC+TGG - chr6_1:4922356-4922375 Msa0870490:intron 55.0%
ATCAGCTTCTCGGTCTCGCA+GGG - chr6_1:4923426-4923445 Msa0870490:intron 55.0%
TTAGGGAGAAGTGGGGGAGG+GGG - chr6_1:4910584-4910603 Msa0870490:CDS 60.0%
CAATGAAGGGAACCGCCCCT+GGG - chr6_1:4913274-4913293 Msa0870490:CDS 60.0%
ACTTGTGTGGGTCCCACCCA+GGG + chr6_1:4913293-4913312 None:intergenic 60.0%
AACTTGTGTGGGTCCCACCC+AGG + chr6_1:4913294-4913313 None:intergenic 60.0%
AGATATGGTCAAGGCCCCGG+AGG - chr6_1:4915407-4915426 Msa0870490:CDS 60.0%
!! GGTGGCGGAGGTGGAGTTAA+CGG - chr6_1:4915434-4915453 Msa0870490:CDS 60.0%
GGAGGTGGAGTTAACGGAGG+AGG - chr6_1:4915440-4915459 Msa0870490:CDS 60.0%
GGTGGAGTTAACGGAGGAGG+AGG - chr6_1:4915443-4915462 Msa0870490:CDS 60.0%
GGAGTTAACGGAGGAGGAGG+TGG - chr6_1:4915446-4915465 Msa0870490:CDS 60.0%
GTTAACGGAGGAGGAGGTGG+GGG - chr6_1:4915449-4915468 Msa0870490:CDS 60.0%
ATGCAGCGCCTCAATGAGCG+GGG - chr6_1:4916309-4916328 Msa0870490:CDS 60.0%
GTTCTATGGCACCCGGGATG+CGG - chr6_1:4916331-4916350 Msa0870490:CDS 60.0%
! AGCAGAGGAAGCGTGAGAGC+AGG - chr6_1:4916553-4916572 Msa0870490:CDS 60.0%
! GCAGAGGAAGCGTGAGAGCA+GGG - chr6_1:4916554-4916573 Msa0870490:CDS 60.0%
GGAGAAGTTGAGCAGCGCTG+AGG - chr6_1:4917442-4917461 Msa0870490:CDS 60.0%
CATAGGCGTGAGACGGATGG+AGG - chr6_1:4918636-4918655 Msa0870490:intron 60.0%
GCCGGTAGAAGTCGGTAGCT+CGG + chr6_1:4918744-4918763 None:intergenic 60.0%
GCATGAGTCGGAAAGGGCTG+AGG - chr6_1:4920014-4920033 Msa0870490:intron 60.0%
AGTCGGAAAGGGCTGAGGAC+AGG - chr6_1:4920019-4920038 Msa0870490:intron 60.0%
AGGGCTGAGGACAGGAAAGC+AGG - chr6_1:4920027-4920046 Msa0870490:intron 60.0%
! CACTGGTACTGGAGGTGGAG+CGG + chr6_1:4920827-4920846 None:intergenic 60.0%
! TTGGCCACTGGTACTGGAGG+TGG + chr6_1:4920832-4920851 None:intergenic 60.0%
! CCATTGGCCACTGGTACTGG+AGG + chr6_1:4920835-4920854 None:intergenic 60.0%
CCTCCAGTACCAGTGGCCAA+TGG - chr6_1:4920832-4920851 Msa0870490:intron 60.0%
ACGCCATTGGCCACTGGTAC+TGG + chr6_1:4920838-4920857 None:intergenic 60.0%
!! CCCGAATGCTGACTCTGAGG+AGG - chr6_1:4920939-4920958 Msa0870490:intron 60.0%
CTCCCGGGAAGATCATGAGG+AGG - chr6_1:4921164-4921183 Msa0870490:intron 60.0%
AGCTGGATCGAGAGCCGAGA+AGG + chr6_1:4922231-4922250 None:intergenic 60.0%
TCGGCTCTCGATCCAGCTCA+TGG - chr6_1:4922233-4922252 Msa0870490:intron 60.0%
! GAGGCTCCTTTTTGCCAGGG+AGG + chr6_1:4922344-4922363 None:intergenic 60.0%
! CCGTGAGGCTCCTTTTTGCC+AGG + chr6_1:4922348-4922367 None:intergenic 60.0%
CATCAGCTTCTCGGTCTCGC+AGG - chr6_1:4923425-4923444 Msa0870490:intron 60.0%
TCGGTCTCGCAGGGAAAGAG+AGG - chr6_1:4923435-4923454 Msa0870490:intron 60.0%
TAGGGAGAAGTGGGGGAGGG+GGG - chr6_1:4910585-4910604 Msa0870490:CDS 65.0%
CCAGGGGCGGTTCCCTTCAT+TGG + chr6_1:4913276-4913295 None:intergenic 65.0%
CCAATGAAGGGAACCGCCCC+TGG - chr6_1:4913273-4913292 Msa0870490:CDS 65.0%
CTTGTGTGGGTCCCACCCAG+GGG + chr6_1:4913292-4913311 None:intergenic 65.0%
TATGGTCAAGGCCCCGGAGG+TGG - chr6_1:4915410-4915429 Msa0870490:CDS 65.0%
GGCGGAGGTGGAGTTAACGG+AGG - chr6_1:4915437-4915456 Msa0870490:CDS 65.0%
GAGCGGGGTTCTATGGCACC+CGG - chr6_1:4916324-4916343 Msa0870490:CDS 65.0%
AGCGGGGTTCTATGGCACCC+GGG - chr6_1:4916325-4916344 Msa0870490:CDS 65.0%
CGCTCCACCTCCAGTACCAG+TGG - chr6_1:4920825-4920844 Msa0870490:intron 65.0%
AGGGAGAAGTGGGGGAGGGG+GGG - chr6_1:4910586-4910605 Msa0870490:CDS 70.0%
TGAAGGGAACCGCCCCTGGG+TGG - chr6_1:4913277-4913296 Msa0870490:CDS 70.0%
GAAGGGAACCGCCCCTGGGT+GGG - chr6_1:4913278-4913297 Msa0870490:CDS 70.0%
ACCTCCGCCACCACCACCTC+CGG + chr6_1:4915426-4915445 None:intergenic 70.0%
! GGAGGACGAGCACCGTCCAG+AGG - chr6_1:4921041-4921060 Msa0870490:intron 70.0%
! GACGAGCACCGTCCAGAGGC+TGG - chr6_1:4921045-4921064 Msa0870490:intron 70.0%
! GAGCACCGTCCAGAGGCTGG+AGG - chr6_1:4921048-4921067 Msa0870490:intron 70.0%
GTGTGGGTCCCACCCAGGGG+CGG + chr6_1:4913289-4913308 None:intergenic 75.0%
GGTCAAGGCCCCGGAGGTGG+TGG - chr6_1:4915413-4915432 Msa0870490:CDS 75.0%
! CAAGGCCCCGGAGGTGGTGG+TGG - chr6_1:4915416-4915435 Msa0870490:CDS 75.0%
CTCCGCCACCACCACCTCCG+GGG + chr6_1:4915424-4915443 None:intergenic 75.0%
CCTCCGCCACCACCACCTCC+GGG + chr6_1:4915425-4915444 None:intergenic 75.0%
!! GGAGGTGGTGGTGGCGGAGG+TGG - chr6_1:4915425-4915444 Msa0870490:CDS 75.0%
!!! GGCCCCGGAGGTGGTGGTGG+CGG - chr6_1:4915419-4915438 Msa0870490:CDS 80.0%
!!! CCCGGAGGTGGTGGTGGCGG+AGG - chr6_1:4915422-4915441 Msa0870490:CDS 80.0%
Chromosome Type Strat End Strand Name
chr6_1 gene 4909023 4923861 4909023 ID=Msa0870490;Name=Msa0870490
chr6_1 mRNA 4909023 4923861 4909023 ID=Msa0870490-mRNA-1;Parent=Msa0870490;Name=Msa0870490-mRNA-1;_AED=0.13;_eAED=0.13;_QI=0|0.86|0.83|0.91|1|1|24|369|1430
chr6_1 exon 4909023 4909538 4909023 ID=Msa0870490-mRNA-1:exon:1598;Parent=Msa0870490-mRNA-1
chr6_1 exon 4910231 4910342 4910231 ID=Msa0870490-mRNA-1:exon:1597;Parent=Msa0870490-mRNA-1
chr6_1 exon 4910502 4910665 4910502 ID=Msa0870490-mRNA-1:exon:1596;Parent=Msa0870490-mRNA-1
chr6_1 exon 4910774 4910926 4910774 ID=Msa0870490-mRNA-1:exon:1595;Parent=Msa0870490-mRNA-1
chr6_1 exon 4911013 4911151 4911013 ID=Msa0870490-mRNA-1:exon:1594;Parent=Msa0870490-mRNA-1
chr6_1 exon 4911272 4911369 4911272 ID=Msa0870490-mRNA-1:exon:1593;Parent=Msa0870490-mRNA-1
chr6_1 exon 4911456 4912067 4911456 ID=Msa0870490-mRNA-1:exon:1592;Parent=Msa0870490-mRNA-1
chr6_1 exon 4912260 4912354 4912260 ID=Msa0870490-mRNA-1:exon:1591;Parent=Msa0870490-mRNA-1
chr6_1 exon 4912488 4913129 4912488 ID=Msa0870490-mRNA-1:exon:1590;Parent=Msa0870490-mRNA-1
chr6_1 exon 4913251 4913505 4913251 ID=Msa0870490-mRNA-1:exon:1589;Parent=Msa0870490-mRNA-1
chr6_1 exon 4913617 4913744 4913617 ID=Msa0870490-mRNA-1:exon:1588;Parent=Msa0870490-mRNA-1
chr6_1 exon 4913872 4914026 4913872 ID=Msa0870490-mRNA-1:exon:1587;Parent=Msa0870490-mRNA-1
chr6_1 exon 4914117 4914304 4914117 ID=Msa0870490-mRNA-1:exon:1586;Parent=Msa0870490-mRNA-1
chr6_1 exon 4914443 4914472 4914443 ID=Msa0870490-mRNA-1:exon:1585;Parent=Msa0870490-mRNA-1
chr6_1 exon 4914565 4914640 4914565 ID=Msa0870490-mRNA-1:exon:1584;Parent=Msa0870490-mRNA-1
chr6_1 exon 4915346 4915485 4915346 ID=Msa0870490-mRNA-1:exon:1583;Parent=Msa0870490-mRNA-1
chr6_1 exon 4916158 4916431 4916158 ID=Msa0870490-mRNA-1:exon:1582;Parent=Msa0870490-mRNA-1
chr6_1 exon 4916513 4916686 4916513 ID=Msa0870490-mRNA-1:exon:1581;Parent=Msa0870490-mRNA-1
chr6_1 exon 4916795 4916893 4916795 ID=Msa0870490-mRNA-1:exon:1580;Parent=Msa0870490-mRNA-1
chr6_1 exon 4916989 4917175 4916989 ID=Msa0870490-mRNA-1:exon:1579;Parent=Msa0870490-mRNA-1
chr6_1 exon 4917281 4917475 4917281 ID=Msa0870490-mRNA-1:exon:1578;Parent=Msa0870490-mRNA-1
chr6_1 exon 4918097 4918178 4918097 ID=Msa0870490-mRNA-1:exon:1577;Parent=Msa0870490-mRNA-1
chr6_1 exon 4922804 4922866 4922804 ID=Msa0870490-mRNA-1:exon:1576;Parent=Msa0870490-mRNA-1
chr6_1 exon 4923777 4923861 4923777 ID=Msa0870490-mRNA-1:exon:1575;Parent=Msa0870490-mRNA-1
chr6_1 CDS 4923777 4923861 4923777 ID=Msa0870490-mRNA-1:cds;Parent=Msa0870490-mRNA-1
chr6_1 CDS 4922804 4922866 4922804 ID=Msa0870490-mRNA-1:cds;Parent=Msa0870490-mRNA-1
chr6_1 CDS 4918097 4918178 4918097 ID=Msa0870490-mRNA-1:cds;Parent=Msa0870490-mRNA-1
chr6_1 CDS 4917281 4917475 4917281 ID=Msa0870490-mRNA-1:cds;Parent=Msa0870490-mRNA-1
chr6_1 CDS 4916989 4917175 4916989 ID=Msa0870490-mRNA-1:cds;Parent=Msa0870490-mRNA-1
chr6_1 CDS 4916795 4916893 4916795 ID=Msa0870490-mRNA-1:cds;Parent=Msa0870490-mRNA-1
chr6_1 CDS 4916513 4916686 4916513 ID=Msa0870490-mRNA-1:cds;Parent=Msa0870490-mRNA-1
chr6_1 CDS 4916158 4916431 4916158 ID=Msa0870490-mRNA-1:cds;Parent=Msa0870490-mRNA-1
chr6_1 CDS 4915346 4915485 4915346 ID=Msa0870490-mRNA-1:cds;Parent=Msa0870490-mRNA-1
chr6_1 CDS 4914565 4914640 4914565 ID=Msa0870490-mRNA-1:cds;Parent=Msa0870490-mRNA-1
chr6_1 CDS 4914443 4914472 4914443 ID=Msa0870490-mRNA-1:cds;Parent=Msa0870490-mRNA-1
chr6_1 CDS 4914117 4914304 4914117 ID=Msa0870490-mRNA-1:cds;Parent=Msa0870490-mRNA-1
chr6_1 CDS 4913872 4914026 4913872 ID=Msa0870490-mRNA-1:cds;Parent=Msa0870490-mRNA-1
chr6_1 CDS 4913617 4913744 4913617 ID=Msa0870490-mRNA-1:cds;Parent=Msa0870490-mRNA-1
chr6_1 CDS 4913251 4913505 4913251 ID=Msa0870490-mRNA-1:cds;Parent=Msa0870490-mRNA-1
chr6_1 CDS 4912488 4913129 4912488 ID=Msa0870490-mRNA-1:cds;Parent=Msa0870490-mRNA-1
chr6_1 CDS 4912260 4912354 4912260 ID=Msa0870490-mRNA-1:cds;Parent=Msa0870490-mRNA-1
chr6_1 CDS 4911456 4912067 4911456 ID=Msa0870490-mRNA-1:cds;Parent=Msa0870490-mRNA-1
chr6_1 CDS 4911272 4911369 4911272 ID=Msa0870490-mRNA-1:cds;Parent=Msa0870490-mRNA-1
chr6_1 CDS 4911013 4911151 4911013 ID=Msa0870490-mRNA-1:cds;Parent=Msa0870490-mRNA-1
chr6_1 CDS 4910774 4910926 4910774 ID=Msa0870490-mRNA-1:cds;Parent=Msa0870490-mRNA-1
chr6_1 CDS 4910502 4910665 4910502 ID=Msa0870490-mRNA-1:cds;Parent=Msa0870490-mRNA-1
chr6_1 CDS 4910231 4910342 4910231 ID=Msa0870490-mRNA-1:cds;Parent=Msa0870490-mRNA-1
chr6_1 CDS 4909392 4909538 4909392 ID=Msa0870490-mRNA-1:cds;Parent=Msa0870490-mRNA-1
chr6_1 three_prime_UTR 4909023 4909391 4909023 ID=Msa0870490-mRNA-1:three_prime_utr;Parent=Msa0870490-mRNA-1
Gene Sequence

>Msa0870490

ATGGGATGGGTGAGAATTTCGACTGGGAATGTGGAAGTAGAAGTAGGGTTCAATTCATGTGATTGGAAATGGGGAAGAAGAACAGGTATGAAGAGGGCTAGAGATGATATTTACTCTGCTTCTGCTTCTCAATTCAAACGACCCTATGGTATGAAGAGGGCTAGAGATGATATTTACTCTGCTTCTGCTTCTCAATTCAAACGACCCTATGCTTCATCACGTGGTGATTCATATGGTCAAGGCCCCGGAGGTGGTGGTGGCGGAGGTGGAGTTAACGGAGGAGGAGGTGGGGGTGCAACTACCTCCCAAAAATTGACAACCAATGATGCTTTATCCTATTTGAAGGAAGTGAAAGACATGTTTCAGGATCAAAAAGAAAAATATGACATGTTCCTTGAGGTCATGAAAGATTTCAAGGCTCAAAAGACTGACACTACTGGTGTCATAGCAAGGGTTAAGGAACTATTCAAAGGTCACAACCATTTGATTTTTGGATTTAACACTTTCCTGCCAAAGGGATATGAGATAACACTTGATGAGGATGAGGACGAAGCTCCTCCGAAGAAAACGGTTGAATTTGAAGAAGCTATTAGTTTTGTGAACAAGATAAAGAAACGTTTCCAAAATGATGAACATGTTTACAAATCATTTTTGGACATTTTGAATATGTATCGCAAAGAGCACAAGACCATCACTGAGGTTTATAGTGAGGTTGCTACCCTTTTTAAGTCGCATGGAGATTTGCTCGATGAGTTCACCAGATTCTTACCAGATAATTCTTCAGCACCTTCCACACAGCATGCTCCATTTGGTCGAAATTCAATGCAGCGCCTCAATGAGCGGGGTTCTATGGCACCCGGGATGCGGCAAATGCAAGTAGATAAGCAACGATATCGGCGAGACCGATTTTCTTCTCATGATCGTGATATGAGTGTTGAACGTCCTGATCTGGATGATGACAAAACAATGATGAACTTTCACAAGGAGCAGAGGAAGCGTGAGAGCAGGGATAGAAGGGTGCGCGATCACGATGATAGAGAACATGATCTTGATAACAGCAGGGATTTGCACTCACAACGCTTTCCTGACAAAAAGAAATATGTTAAGAAGACTGAAGCTTATGACTTTGCTGCTCATGATGATAAAGATGGAATGAAGCCAGTCATGTATAGTCAAGCAATCAGTTTCTGCGATAAAGTTAAGGAGAAGTTGAGCAGCGCTGAGGACTACCAAACATTCTTGAAGTGCCTTAATATTTTTGGCAACGGAATTATAAAAAAGAATGATTTACAAAATTTGGTGACCGATTTGCTTGGAAAGCATTCTGATCTAATGAGCGAATTCAATGATTTCTTAGAGCGTTGTGAAAATATTGACGGGTTCCTTGCTGGTGTCATGAGTAAAAAGCCACTTGCTGCTGATGGTCATTTATCACGATCATCCAAGTTGGAGGACAGAGAACATAGGCGTGAGACGGATGGAGGTAAAGAGAAGGAAAGATACAAGGAGAAGTACATGGGAAAATCCATTCAAGAACTTGACCTTAGCGACTGCAAACGTTGTTCTCCGAGCTACCGACTTCTACCGGCCGATTATCCAATTCCTACTGCTAGTCAGCGATCTGAGCTTGGTGCGCAAGTACTGAATGATCACTGGGTATCTGTGACTTCCGGAAGCGAGGATTACTCTTTCAAACATATGCGCAGGAATCAATACGAAGAAAGCTTGTTCAGATGTGAAGATGACAGGTTTGAGCTGGACATGTTATTAGAGTCTGTAAGTTCCGCTGCTAAACGAGCTGACGAGTTGTACAACAGCATTGTTGAAAATAAGATTAGTGTGGAGAGTCTAAGCCGTATTGAAGATCACTTCACTGTTCTAAATCTAAGGTGCATTGAACGCCTATATGGTGACCATGGTCTTGATGTCTTAGACATACTGCGTAAGAACCCAACTCATGCTCTGCCTGTAATATTGACTCGATTGAAGCAGAAACAAGAGGAGTGGAATAGGTGTCGTTCAGATTTCAATAAAGTTTGGGCTGACATTTATTCTAAAAATCACTACAAATCACTTGATCATCGTAGCTTCTATTTCAAGCAACAAGATTCGAAGAACTTGAGCACAAAATCTTTGGTGACTGAGATCAAAGAAATTAAAGAGAAGCAGCAGAAAGAGGATGACATCGTTCAGACTATTGCTGCAGGAGCAAAACATCCTCTCATTCCACATTTCGAGTTTGACTTTTCTGATGCTGAAATTCACGAGGACCTGTATAAACTTGTTCGTTATTCATGTGAGGAAGTATTCCAAAGTAAAGAGTTATTCAATAAAATTATGAGGCTCTGGAGTACCTTCTTGGAACCGATGCTTGGTGTAACTTCCCAATCGCATGAGTCGGAAAGGGCTGAGGACAGGAAAGCAGGACACAACGCTCGAAGTTCTGTTGCACCTAACGTAGGAGGTGATGGAAGCCCTAACAGAGAGTCCAATTCAAGGCTACCAAAATCTGACAAGAATGAAGTTGATGGTAGAGTAGGTGAAGTTAAAAATGGTCACCGGACTAGTGTAGCTGCCAATGATAAAGAAAACGGTTCTCTTGGTGGCGAGCTTGTTAGTAGAGATGATCATTTAATGGATAATAAAGGGCAGAAAAGTGTTGAAAGCAGTGATAAAGCCCCTGGATTTGTTAAACAGTTCTCTGATGAACAAGCAGCGAGAAACTCTGCATCTGTCACAATTAGAGGCGAAAGCAGTGTGCATATGTCCCCAGGCCGCGTACTTACTCCAACCCGACCTACTGATGCTGATGTCTCTATTGCTGTAGTCATAGCCAAGTCTCCGAGTGCTAATGTACCTTTGGTGGAGGGCGTTGCCGCTCCACCTCCAGTACCAGTGGCCAATGGCGTGTTAGTTGAGAACAGTAAAGTTAAAAGCAATGAAGAATCTTCTGTGCCTTGCAAAGTTGAAAAAGAAGAGGGTGAGTTATCCCCGAATGCTGACTCTGAGGAGGATAACTTTGTTGCCTATGGAGATTCAAATGCACAGTCAAACCACAATGACGATAGAAGGAAATACGAGTCTAGAAATGGGGAGGACGAGCACCGTCCAGAGGCTGGAGGTGATAATGATGCAGATGCTGATGACGAAGACAGCGAAAATGTTTCTGAAGCTGGTGAAGATGTGTCAGGAAGTGAGTCTGCTGGTGATGAATGCTCCCGGGAAGATCATGAGGAGGAAGATATGGAACATGATGATGTTGATGGTAAAGCCGAGAGTGAAGGTGAAGCAGAGGGGATGTGTGATGCTGATGCACAAACTGGAGTAGATGGCTCATCTTTACCGTTATCAGAGAGGTTTCTGTCAACTGTGAAACCTCTCACAAAGCATGTATCTGCAGTTTCATTTGTTGAAGATGTGAAGGATTCAAGGGTGTTTTACGGAAATGATGATTTCTTTGTTCTCTTTAGGCTTCATCAAATTCTTTATGAAAGGATCTTATCTGCAAAAGAAAATTCAACAAGCGCTGAAATGAAATGGAAAACAAAAGATTCTAGTTCTACAGATCCTTACGCAAGATTTATGGATGCATTGTATAATTTGCTCGATGGATCCGCCGAGAATGCCAAGTTTGAAGATGAATGTCGAGCAATTCTTGGAAACCAGTCTTATGTGCTATTCACATTGGACAAGTTAATATATAAATTAATCAGACAGCTTCAAACTGTTGCAACCGATGAGGAAGACGCTAAGCTTCTCCAATTATACGAGTATGAAAAGTCTCGGAAACCTGGGAAATTAAATGATTCAGTATATCATTCAAATGCACATGTTATCCTTCATGAGGAGAACATATACCGGTTTCAATCTTCGTCTAGTCCTTCTCGGCTCTCGATCCAGCTCATGGACAATATGAATGAAAAGCCCGAGATTGCTGCTGTTGCTGTTGATCCAGATTTTTCATTTTATCTGCACAATGATTTTCTGTCTGTCCTCCCTGGCAAAAAGGAGCCTCACGGCATTTTACTGGAAAGAAACAAACCGAAATATGGGGACTTAGATGAGCTTTCTGCAATTTGTGCTGTAATGGAAGATGTCAAAGTAGTTAATGGATTGGAATGCAAGATATCTTGCAACTCATCCAAGATTTCTTATGTTCTCGACACACAAGATTTTTTCTTCCGACCAAGAAGGAAAAGACGAACACCATCATCATCATCAAGTACATCAGCTTCTCGGTCTCGCAGGGAAAGAGAGGAAAGATTCCGCAAATTGATGGCGTCCTCCACCTAA
Protein sequence

>Msa0870490

MGWVRISTGNVEVEVGFNSCDWKWGRRTGMKRARDDIYSASASQFKRPYGMKRARDDIYSASASQFKRPYASSRGDSYGQGPGGGGGGGGVNGGGGGGATTSQKLTTNDALSYLKEVKDMFQDQKEKYDMFLEVMKDFKAQKTDTTGVIARVKELFKGHNHLIFGFNTFLPKGYEITLDEDEDEAPPKKTVEFEEAISFVNKIKKRFQNDEHVYKSFLDILNMYRKEHKTITEVYSEVATLFKSHGDLLDEFTRFLPDNSSAPSTQHAPFGRNSMQRLNERGSMAPGMRQMQVDKQRYRRDRFSSHDRDMSVERPDLDDDKTMMNFHKEQRKRESRDRRVRDHDDREHDLDNSRDLHSQRFPDKKKYVKKTEAYDFAAHDDKDGMKPVMYSQAISFCDKVKEKLSSAEDYQTFLKCLNIFGNGIIKKNDLQNLVTDLLGKHSDLMSEFNDFLERCENIDGFLAGVMSKKPLAADGHLSRSSKLEDREHRRETDGGKEKERYKEKYMGKSIQELDLSDCKRCSPSYRLLPADYPIPTASQRSELGAQVLNDHWVSVTSGSEDYSFKHMRRNQYEESLFRCEDDRFELDMLLESVSSAAKRADELYNSIVENKISVESLSRIEDHFTVLNLRCIERLYGDHGLDVLDILRKNPTHALPVILTRLKQKQEEWNRCRSDFNKVWADIYSKNHYKSLDHRSFYFKQQDSKNLSTKSLVTEIKEIKEKQQKEDDIVQTIAAGAKHPLIPHFEFDFSDAEIHEDLYKLVRYSCEEVFQSKELFNKIMRLWSTFLEPMLGVTSQSHESERAEDRKAGHNARSSVAPNVGGDGSPNRESNSRLPKSDKNEVDGRVGEVKNGHRTSVAANDKENGSLGGELVSRDDHLMDNKGQKSVESSDKAPGFVKQFSDEQAARNSASVTIRGESSVHMSPGRVLTPTRPTDADVSIAVVIAKSPSANVPLVEGVAAPPPVPVANGVLVENSKVKSNEESSVPCKVEKEEGELSPNADSEEDNFVAYGDSNAQSNHNDDRRKYESRNGEDEHRPEAGGDNDADADDEDSENVSEAGEDVSGSESAGDECSREDHEEEDMEHDDVDGKAESEGEAEGMCDADAQTGVDGSSLPLSERFLSTVKPLTKHVSAVSFVEDVKDSRVFYGNDDFFVLFRLHQILYERILSAKENSTSAEMKWKTKDSSSTDPYARFMDALYNLLDGSAENAKFEDECRAILGNQSYVLFTLDKLIYKLIRQLQTVATDEEDAKLLQLYEYEKSRKPGKLNDSVYHSNAHVILHEENIYRFQSSSSPSRLSIQLMDNMNEKPEIAAVAVDPDFSFYLHNDFLSVLPGKKEPHGILLERNKPKYGDLDELSAICAVMEDVKVVNGLECKISCNSSKISYVLDTQDFFFRPRRKRRTPSSSSSTSASRSRREREERFRKLMASST*