Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0910420 | XP_004503722.1 | 81.657 | 507 | 90 | 2 | 1 | 507 | 1 | 504 | 0.0 | 852 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0910420 | sp|Q9ZNX6|GSH1_MEDTR | 80.315 | 508 | 96 | 2 | 2 | 507 | 3 | 508 | 0.0 | 842 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0883040 | Msa0910420 | 0.830948 | 2.202727e-55 | -8.615850e-47 |
| Msa0889340 | Msa0910420 | 0.849484 | 3.140290e-60 | -8.615850e-47 |
| Msa0910410 | Msa0910420 | 0.816580 | 5.140314e-52 | -8.615850e-47 |
| Msa0910420 | Msa0948280 | 0.927702 | 8.127667e-92 | -8.615850e-47 |
| Msa0910420 | Msa0984680 | 0.973865 | 3.698146e-137 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0910420 | MtrunA17_Chr8g0386791 | 80.315 | 508 | 96 | 2 | 2 | 507 | 3 | 508 | 0.0 | 842 |
| Msa0910420 | MtrunA17_Chr5g0397471 | 66.810 | 464 | 154 | 0 | 44 | 507 | 49 | 512 | 0.0 | 659 |
| Msa0910420 | MtrunA17_Chr5g0397441 | 64.242 | 165 | 59 | 0 | 343 | 507 | 1 | 165 | 1.94e-69 | 219 |
| Msa0910420 | MtrunA17_Chr5g0397431 | 60.163 | 123 | 49 | 0 | 188 | 310 | 1 | 123 | 6.65e-47 | 159 |
| Msa0910420 | MtrunA17_Chr5g0397421 | 75.000 | 88 | 22 | 0 | 94 | 181 | 10 | 97 | 4.85e-43 | 148 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0910420 | AT4G23100.3 | 80.752 | 452 | 87 | 0 | 56 | 507 | 71 | 522 | 0.0 | 771 |
| Msa0910420 | AT4G23100.1 | 80.752 | 452 | 87 | 0 | 56 | 507 | 71 | 522 | 0.0 | 771 |
| Msa0910420 | AT4G23100.2 | 82.000 | 400 | 72 | 0 | 56 | 455 | 71 | 470 | 0.0 | 694 |
Find 121 sgRNAs with CRISPR-Local
Find 494 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACTCCAGCTGAGGGGCTTT+TGG | 0.163907 | 6_2:+14701341 | Msa0910420:CDS |
| TACAAACATTCTACCCAAAA+AGG | 0.207275 | 6_2:-14701445 | None:intergenic |
| TATGAGGAATTGCTTTATTA+AGG | 0.212743 | 6_2:+14701405 | Msa0910420:CDS |
| GCTATTTGCTCATACTTAAT+AGG | 0.213492 | 6_2:-14695837 | None:intergenic |
| TAAAGCTGTTGCTGAGAAAA+TGG | 0.218963 | 6_2:+14696835 | Msa0910420:CDS |
| ATGGAAGGTGATAAAATTAT+TGG | 0.264744 | 6_2:+14695906 | Msa0910420:CDS |
| GATAAGTTTATGTGCTTTAC+CGG | 0.280516 | 6_2:+14699436 | Msa0910420:CDS |
| TAATGATTGGGAGAATCATT+TGG | 0.297841 | 6_2:+14699237 | Msa0910420:CDS |
| GGTCAGGCTAAAGAGATATT+TGG | 0.302209 | 6_2:+14699385 | Msa0910420:intron |
| TATGTGCTTTACCGGCATTT+TGG | 0.317971 | 6_2:+14699444 | Msa0910420:CDS |
| CAAATAGCAGAATTGCTAAA+TGG | 0.329132 | 6_2:+14695852 | Msa0910420:CDS |
| GGTACTGAACATGAAAAGTT+TGG | 0.334434 | 6_2:+14695792 | Msa0910420:CDS |
| CTCTGGCAGGCTACCAAAAC+TGG | 0.342219 | 6_2:+14700264 | Msa0910420:intron |
| GTCTGATGCAGGGTTTCAAC+AGG | 0.353436 | 6_2:-14696135 | None:intergenic |
| TGGTGTCTTTAGACCAGTTT+TGG | 0.362938 | 6_2:-14700277 | None:intergenic |
| AATTACCATCTCTTAATGAT+TGG | 0.363029 | 6_2:+14699224 | Msa0910420:CDS |
| AAAACTACCTTTGGTATCAT+AGG | 0.367052 | 6_2:-14696911 | None:intergenic |
| GTTGTAAAACCAAGGATAAA+TGG | 0.370943 | 6_2:+14694271 | Msa0910420:CDS |
| AAGACAAATGCTGAGGAATA+AGG | 0.371420 | 6_2:+14699791 | Msa0910420:CDS |
| CTTTGAGTCCAGACTTTGGC+TGG | 0.374549 | 6_2:-14696883 | None:intergenic |
| ACTGTACTGGAATGACCTTC+AGG | 0.375014 | 6_2:+14699026 | Msa0910420:CDS |
| AATGATTGGGAGAATCATTT+GGG | 0.394541 | 6_2:+14699238 | Msa0910420:CDS |
| CAAGGCTAGCACGAAACTTC+CGG | 0.407747 | 6_2:-14698415 | None:intergenic |
| ATAGGTTTCCAGCCAAAGTC+TGG | 0.408156 | 6_2:+14696875 | Msa0910420:CDS |
| GTTGCTGAGAAAATGGGAAT+TGG | 0.415295 | 6_2:+14696842 | Msa0910420:CDS |
| TAAACTCTTACAGGTCAATC+TGG | 0.415633 | 6_2:+14698367 | Msa0910420:intron |
| TATTTGGACTGATGTTGATA+AGG | 0.417629 | 6_2:+14698692 | Msa0910420:CDS |
| TAAAGAGAGGGTGTTTGAAA+TGG | 0.417674 | 6_2:-14694106 | None:intergenic |
| GCAAATTCACCCTTCACAAA+TGG | 0.427211 | 6_2:+14698551 | Msa0910420:CDS |
| GGAAAGCTACCTTGTATTCC+CGG | 0.427455 | 6_2:+14699199 | Msa0910420:CDS |
| ATTACCATCTCTTAATGATT+GGG | 0.431120 | 6_2:+14699225 | Msa0910420:CDS |
| TTTCTTCATAAGTCTGATGC+AGG | 0.444194 | 6_2:-14696146 | None:intergenic |
| AGAGAGGGTGTTTGAAATGG+AGG | 0.457261 | 6_2:-14694103 | None:intergenic |
| GTAGCTGAGGTGGCAAGAAC+AGG | 0.462943 | 6_2:+14700949 | Msa0910420:CDS |
| TATTAGATTTGACAGCAGAT+TGG | 0.463933 | 6_2:+14699757 | Msa0910420:CDS |
| AGCCCACGAGAACCAACTTT+GGG | 0.464046 | 6_2:-14698204 | None:intergenic |
| GGGCAAGCAAAACATATCAT+TGG | 0.467215 | 6_2:+14696080 | Msa0910420:intron |
| AAGAAACACATCGACTGTAC+TGG | 0.468991 | 6_2:+14699013 | Msa0910420:CDS |
| CTCATACTGACAAACCCATT+GGG | 0.474705 | 6_2:-14698578 | None:intergenic |
| AAAGCTGTTGCTGAGAAAAT+GGG | 0.478931 | 6_2:+14696836 | Msa0910420:CDS |
| AACAAATACATGCCCAAAGT+TGG | 0.479007 | 6_2:+14698192 | Msa0910420:CDS |
| ATCTATTGATCATGTATATG+AGG | 0.482675 | 6_2:+14701389 | Msa0910420:CDS |
| ACAATATCTACAGGATGGCT+TGG | 0.487073 | 6_2:+14700888 | Msa0910420:intron |
| TCACAAATGGAAAGCCCAAT+GGG | 0.491400 | 6_2:+14698564 | Msa0910420:CDS |
| ATTGGGCTTTCCATTTGTGA+AGG | 0.492044 | 6_2:-14698561 | None:intergenic |
| GGTGGTCAGTTAGAACTTAG+TGG | 0.492360 | 6_2:+14696108 | Msa0910420:CDS |
| AAGCCCACGAGAACCAACTT+TGG | 0.494264 | 6_2:-14698205 | None:intergenic |
| AAAGAATCATCGAAAACAAA+AGG | 0.495048 | 6_2:-14698732 | None:intergenic |
| AAAGCACATAAACTTATCAT+TGG | 0.495697 | 6_2:-14699431 | None:intergenic |
| TGCTGAAGAGGTTCTAAAGT+TGG | 0.497850 | 6_2:+14700326 | Msa0910420:CDS |
| CACCTGTACAGTGCATGTCC+TGG | 0.499549 | 6_2:-14698238 | None:intergenic |
| AATTCCAAAAGCCCCTCAGC+TGG | 0.499718 | 6_2:-14701345 | None:intergenic |
| TTCAGCAAACCATCTCGAAA+TGG | 0.502074 | 6_2:-14700297 | None:intergenic |
| GTGGGCTTGACGTGATGTCC+AGG | 0.504094 | 6_2:+14698220 | Msa0910420:CDS |
| GTTCTGAAGCTGACATGATC+CGG | 0.509031 | 6_2:+14698396 | Msa0910420:CDS |
| GAGTTACCTCCATTTATCCT+TGG | 0.509614 | 6_2:-14694280 | None:intergenic |
| GTAGGTGTCACTCCAGCTGA+GGG | 0.509698 | 6_2:+14701333 | Msa0910420:intron |
| GCTGAAGCATGTTGCTGAAG+AGG | 0.509896 | 6_2:+14700314 | Msa0910420:CDS |
| ATGTCTTTGAGTCCAGACTT+TGG | 0.514374 | 6_2:-14696887 | None:intergenic |
| ATGCCCAAAGTTGGTTCTCG+TGG | 0.516817 | 6_2:+14698201 | Msa0910420:CDS |
| AGTTGGTTGAAGATAAAGAG+AGG | 0.518845 | 6_2:-14694119 | None:intergenic |
| TCTCATACTGACAAACCCAT+TGG | 0.521795 | 6_2:-14698579 | None:intergenic |
| TTGTTAGTTTCAATGACCGT+AGG | 0.523060 | 6_2:+14694154 | Msa0910420:CDS |
| TTGGGCTTTCCATTTGTGAA+GGG | 0.523652 | 6_2:-14698560 | None:intergenic |
| ATTAAGAGATGGTAATTCAC+CGG | 0.524008 | 6_2:-14699218 | None:intergenic |
| TTCTTACGGGCTGCAATGCA+AGG | 0.524114 | 6_2:-14698433 | None:intergenic |
| TTCTGGGATAAAGTAATGGA+AGG | 0.525114 | 6_2:+14695891 | Msa0910420:CDS |
| GGTAATTCACCGGGAATACA+AGG | 0.526372 | 6_2:-14699208 | None:intergenic |
| ATCTAAAAGCAGACATAACC+AGG | 0.527432 | 6_2:-14701486 | None:intergenic |
| TTTGCTGTAGGACTTCTTGG+CGG | 0.529779 | 6_2:+14699177 | Msa0910420:intron |
| GGTAGGTGTCACTCCAGCTG+AGG | 0.530270 | 6_2:+14701332 | Msa0910420:intron |
| CTGTACTGGAATGACCTTCA+GGG | 0.536065 | 6_2:+14699027 | Msa0910420:CDS |
| TGGAATTGTATCATGGAAAG+TGG | 0.536508 | 6_2:+14701361 | Msa0910420:CDS |
| TTGCTGTAGGACTTCTTGGC+GGG | 0.540519 | 6_2:+14699178 | Msa0910420:intron |
| TTCACAAATGGAAAGCCCAA+TGG | 0.543962 | 6_2:+14698563 | Msa0910420:CDS |
| ACAACAACAGCTTCAGTTGG+AGG | 0.545479 | 6_2:-14694198 | None:intergenic |
| TTTGAATGTAGTAGCTGAGG+TGG | 0.550346 | 6_2:+14700939 | Msa0910420:CDS |
| ATGCAAGACTAACTTGATAG+AGG | 0.555252 | 6_2:-14696179 | None:intergenic |
| AAACCTAGGCTATATAGTCC+TGG | 0.557005 | 6_2:+14701468 | Msa0910420:three_prime_UTR |
| TGCCCAAAGTTGGTTCTCGT+GGG | 0.557825 | 6_2:+14698202 | Msa0910420:CDS |
| CTAAAGACACCATTTCGAGA+TGG | 0.568445 | 6_2:+14700288 | Msa0910420:CDS |
| GTTGGTTGAAGATAAAGAGA+GGG | 0.571845 | 6_2:-14694118 | None:intergenic |
| AGATGAGAGGTGCTGACGGA+GGG | 0.574545 | 6_2:+14699408 | Msa0910420:CDS |
| TGTCTCTGGTTGTAAAACCA+AGG | 0.577002 | 6_2:+14694263 | Msa0910420:CDS |
| AAGATAGATGGGAACCCTGA+AGG | 0.577010 | 6_2:-14699041 | None:intergenic |
| GTCCAGGACATGCACTGTAC+AGG | 0.579109 | 6_2:+14698236 | Msa0910420:CDS |
| GCAACAACAACAGCTTCAGT+TGG | 0.579293 | 6_2:-14694201 | None:intergenic |
| CCGCCACTTACCCAAAATGC+CGG | 0.585206 | 6_2:-14699455 | None:intergenic |
| TTCTTCATAAGTCTGATGCA+GGG | 0.586177 | 6_2:-14696145 | None:intergenic |
| CAAAACATATCATTGGAGCC+AGG | 0.589030 | 6_2:+14696087 | Msa0910420:CDS |
| TGTTAGTTTCAATGACCGTA+GGG | 0.589372 | 6_2:+14694155 | Msa0910420:CDS |
| TTTGGGCACTATATTTCCTG+AGG | 0.591776 | 6_2:+14699255 | Msa0910420:CDS |
| CAGGATGGCTTGGAAAGAAG+AGG | 0.591818 | 6_2:+14700898 | Msa0910420:intron |
| TTGGAGATGAGAGGTGCTGA+CGG | 0.591982 | 6_2:+14699404 | Msa0910420:CDS |
| TTCCGATAGACAAAACACAT+TGG | 0.593142 | 6_2:-14698989 | None:intergenic |
| GTAGAATGTTTGTAAAACCT+AGG | 0.602737 | 6_2:+14701454 | Msa0910420:three_prime_UTR |
| CTAAGTTCTAACTGACCACC+TGG | 0.606521 | 6_2:-14696105 | None:intergenic |
| AGCTTCAGTTGGAGGACTAG+CGG | 0.612628 | 6_2:-14694190 | None:intergenic |
| TTAAGAGATGGTAATTCACC+GGG | 0.614513 | 6_2:-14699217 | None:intergenic |
| TAACCAGGACTATATAGCCT+AGG | 0.614884 | 6_2:-14701471 | None:intergenic |
| TTCTCCCAATCATTAAGAGA+TGG | 0.617147 | 6_2:-14699229 | None:intergenic |
| AAGAGATATTTGGAGATGAG+AGG | 0.618382 | 6_2:+14699395 | Msa0910420:CDS |
| ATGGGTTTGTCAGTATGAGA+AGG | 0.631446 | 6_2:+14698582 | Msa0910420:CDS |
| AGAGGTTCTAAAGTTGGCAA+AGG | 0.632714 | 6_2:+14700332 | Msa0910420:CDS |
| GAGATGAGAGGTGCTGACGG+AGG | 0.635652 | 6_2:+14699407 | Msa0910420:CDS |
| TATTATGTGATATTGTGTTG+TGG | 0.638648 | 6_2:-14694059 | None:intergenic |
| GATGTTGATAAGGACCGCAC+AGG | 0.642361 | 6_2:+14698702 | Msa0910420:CDS |
| CTGATGCAGGGTTTCAACAG+GGG | 0.644518 | 6_2:-14696133 | None:intergenic |
| TCTGATGCAGGGTTTCAACA+GGG | 0.644584 | 6_2:-14696134 | None:intergenic |
| CAAAAGGCAGCATGCCTGTG+CGG | 0.646851 | 6_2:-14698716 | None:intergenic |
| AGACATGCCTATGATACCAA+AGG | 0.648416 | 6_2:+14696904 | Msa0910420:CDS |
| CGGCAACAATCACTACCCTA+CGG | 0.649819 | 6_2:-14694170 | None:intergenic |
| CAGAAGAAAGACAAATGCTG+AGG | 0.668955 | 6_2:+14699784 | Msa0910420:CDS |
| GTAAAACCAAGGATAAATGG+AGG | 0.669476 | 6_2:+14694274 | Msa0910420:CDS |
| TGTGGTGCATAGAGCAAGAG+GGG | 0.670393 | 6_2:-14694041 | None:intergenic |
| GTTGTGGTGCATAGAGCAAG+AGG | 0.693744 | 6_2:-14694043 | None:intergenic |
| TTGTGGTGCATAGAGCAAGA+GGG | 0.697121 | 6_2:-14694042 | None:intergenic |
| TAGGTGTCACTCCAGCTGAG+GGG | 0.697378 | 6_2:+14701334 | Msa0910420:intron |
| AACATATCATTGGAGCCAGG+TGG | 0.701443 | 6_2:+14696090 | Msa0910420:CDS |
| GTGGTGCATAGAGCAAGAGG+GGG | 0.728330 | 6_2:-14694040 | None:intergenic |
| GACTTGAGAGATGATAGTCA+TGG | 0.732506 | 6_2:-14694013 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATATATTTTTTTTTTATTA+CGG | + | chr6_2:14698463-14698482 | Msa0910420:intron | 0.0% |
| !! | TATATATATATATATATCTC+TGG | - | chr6_2:14694757-14694776 | None:intergenic | 10.0% |
| !! | TTATCATTTAAAAAAGATAA+TGG | - | chr6_2:14695612-14695631 | None:intergenic | 10.0% |
| !!! | ATTATCTTTTTTAAATGATA+AGG | + | chr6_2:14695611-14695630 | Msa0910420:intron | 10.0% |
| !! | AAAAATAAAAAAATTACACT+TGG | - | chr6_2:14696012-14696031 | None:intergenic | 10.0% |
| !!! | TAATTTTATTTTCACATTAT+GGG | + | chr6_2:14696050-14696069 | Msa0910420:intron | 10.0% |
| !!! | AATTAATTTTAATATATAGC+TGG | - | chr6_2:14697620-14697639 | None:intergenic | 10.0% |
| !!! | ATTAATTTTTTTAGCTATTT+TGG | + | chr6_2:14697633-14697652 | Msa0910420:intron | 10.0% |
| !!! | TGTTTAAAATTTTAGAAAAT+GGG | - | chr6_2:14698668-14698687 | None:intergenic | 10.0% |
| !!! | AAATTTTAAACAGTTATATT+TGG | + | chr6_2:14698676-14698695 | Msa0910420:intron | 10.0% |
| !! | AGTTACAATTATAAATAAAA+TGG | - | chr6_2:14700496-14700515 | None:intergenic | 10.0% |
| !!! | TATTTATATGATTTTTTTAG+CGG | + | chr6_2:14700596-14700615 | Msa0910420:intron | 10.0% |
| !!! | ATATTTTATATTCATTAACT+TGG | + | chr6_2:14700984-14701003 | Msa0910420:intron | 10.0% |
| !! | ATAATTTCGATATAAAAAAT+TGG | - | chr6_2:14701112-14701131 | None:intergenic | 10.0% |
| !! | AATTACACAAGTAATATTTA+AGG | + | chr6_2:14694372-14694391 | Msa0910420:intron | 15.0% |
| !! | AAAAAAAAGGAAAATTATCA+TGG | - | chr6_2:14695412-14695431 | None:intergenic | 15.0% |
| !!! | AGTTTGTTACAATTTTATTA+AGG | + | chr6_2:14695468-14695487 | Msa0910420:intron | 15.0% |
| !!! | TACAATTTTATTAAGGATAA+AGG | + | chr6_2:14695475-14695494 | Msa0910420:intron | 15.0% |
| !! | TAAATGATAAGGAAAAAAAT+CGG | + | chr6_2:14695622-14695641 | Msa0910420:intron | 15.0% |
| !!! | GTAATTTTATTTTCACATTA+TGG | + | chr6_2:14696049-14696068 | Msa0910420:intron | 15.0% |
| !!! | GAATAGATTATTTTACTATA+AGG | - | chr6_2:14696428-14696447 | None:intergenic | 15.0% |
| !!! | AATCTATTCATTTTCAATTA+AGG | + | chr6_2:14696439-14696458 | Msa0910420:intron | 15.0% |
| !! | AATTAGACAAATTAAAAGTA+TGG | + | chr6_2:14697569-14697588 | Msa0910420:intron | 15.0% |
| !!! | TCTAATTTAAGATTGTATTT+TGG | + | chr6_2:14698302-14698321 | Msa0910420:intron | 15.0% |
| !!! | ATATATATCATTGTTTCTTA+CGG | - | chr6_2:14698450-14698469 | None:intergenic | 15.0% |
| !!! | CTGTTTAAAATTTTAGAAAA+TGG | - | chr6_2:14698669-14698688 | None:intergenic | 15.0% |
| !! | ATCTTTATAATAGAACATTA+TGG | + | chr6_2:14699550-14699569 | Msa0910420:intron | 15.0% |
| !!! | ATAAAAATAAAACCGTTTTT+GGG | - | chr6_2:14699887-14699906 | None:intergenic | 15.0% |
| !!! | AATAAAAATAAAACCGTTTT+TGG | - | chr6_2:14699888-14699907 | None:intergenic | 15.0% |
| !! | AAATATTAAATTAATGCTAC+TGG | - | chr6_2:14700204-14700223 | None:intergenic | 15.0% |
| !! | AATATATTATATGATGACTT+AGG | + | chr6_2:14700452-14700471 | Msa0910420:intron | 15.0% |
| !! | ATATATTATATGATGACTTA+GGG | + | chr6_2:14700453-14700472 | Msa0910420:intron | 15.0% |
| !!! | TATAAATAAAATGGATTAGA+AGG | - | chr6_2:14700487-14700506 | None:intergenic | 15.0% |
| !!! | TATAAATAAAATGGATTAGA+AGG | - | chr6_2:14700487-14700506 | None:intergenic | 15.0% |
| !! | ACTAATAATATACACATATT+AGG | + | chr6_2:14700848-14700867 | Msa0910420:intron | 15.0% |
| !! | GATGATTTCAATTTCAAATA+TGG | - | chr6_2:14694687-14694706 | None:intergenic | 20.0% |
| !!! | TCATCAAACTTTTGAAAAAA+TGG | + | chr6_2:14694702-14694721 | Msa0910420:intron | 20.0% |
| !!! | TATTACATTTTTATTTTGCG+TGG | + | chr6_2:14695529-14695548 | Msa0910420:intron | 20.0% |
| !!! | AACAAACACTATTCATTTTT+TGG | - | chr6_2:14695558-14695577 | None:intergenic | 20.0% |
| !! | ATATACAATTTGGTACAATT+TGG | + | chr6_2:14695647-14695666 | Msa0910420:intron | 20.0% |
| !! | ACCATTCAAAATAACATAAT+GGG | + | chr6_2:14695683-14695702 | Msa0910420:intron | 20.0% |
| !! | TGTGAAAATAAAATTACACT+TGG | - | chr6_2:14696046-14696065 | None:intergenic | 20.0% |
| !! | TCAATTAAGGAAATATCATA+TGG | + | chr6_2:14696452-14696471 | Msa0910420:intron | 20.0% |
| !!! | TCATGTTCGATTTTTTATAA+TGG | + | chr6_2:14696764-14696783 | Msa0910420:intron | 20.0% |
| !!! | CATGTTCGATTTTTTATAAT+GGG | + | chr6_2:14696765-14696784 | Msa0910420:intron | 20.0% |
| !!! | GATTTTTTATAATGGGAATT+GGG | + | chr6_2:14696772-14696791 | Msa0910420:intron | 20.0% |
| !! | ATGTAAGGAAATAAATATCT+TGG | - | chr6_2:14696799-14696818 | None:intergenic | 20.0% |
| !!! | ATTTTTTTAGCTATTTTGGT+TGG | + | chr6_2:14697637-14697656 | Msa0910420:intron | 20.0% |
| !!! | TGATTCATTTTTAGCTTTAA+TGG | + | chr6_2:14698109-14698128 | Msa0910420:intron | 20.0% |
| !!! | TATATATCATTGTTTCTTAC+GGG | - | chr6_2:14698449-14698468 | None:intergenic | 20.0% |
| !! | TATTTGATGTTCCTAATATT+AGG | + | chr6_2:14698773-14698792 | Msa0910420:intron | 20.0% |
| !! | ATTCAGTAATCTTTCATATA+AGG | + | chr6_2:14698833-14698852 | Msa0910420:intron | 20.0% |
| !! | TTCAGTAATCTTTCATATAA+GGG | + | chr6_2:14698834-14698853 | Msa0910420:intron | 20.0% |
| !! | CAAGAATATTAAAGATAGAT+GGG | - | chr6_2:14699055-14699074 | None:intergenic | 20.0% |
| !! | ACAAGAATATTAAAGATAGA+TGG | - | chr6_2:14699056-14699075 | None:intergenic | 20.0% |
| !!! | AACTAACTTAATCTTTAAGA+CGG | - | chr6_2:14700153-14700172 | None:intergenic | 20.0% |
| !!! | ATATATTAGTTTTTTCGATG+TGG | + | chr6_2:14700710-14700729 | Msa0910420:intron | 20.0% |
| !!! | TTTCTAGTATTAACATGATA+AGG | - | chr6_2:14701074-14701093 | None:intergenic | 20.0% |
| !! | AAAAATATATCGAAATTGCT+AGG | + | chr6_2:14701158-14701177 | Msa0910420:intron | 20.0% |
| !!! | GTTTTTGAAGAAATGTAATA+AGG | + | chr6_2:14701532-14701551 | Msa0910420:three_prime_UTR | 20.0% |
| ! | TATTATGTGATATTGTGTTG+TGG | - | chr6_2:14694062-14694081 | None:intergenic | 25.0% |
| !!! | AACAATTCTTTTGTTTGAGT+TGG | - | chr6_2:14694139-14694158 | None:intergenic | 25.0% |
| !!! | ATCTTTTTCGAAAACTTTGT+GGG | - | chr6_2:14694346-14694365 | None:intergenic | 25.0% |
| !!! | AATCTTTTTCGAAAACTTTG+TGG | - | chr6_2:14694347-14694366 | None:intergenic | 25.0% |
| !! | ACAAAGTTTTCGAAAAAGAT+TGG | + | chr6_2:14694346-14694365 | Msa0910420:intron | 25.0% |
| ! | TTGAGATATAATATTGCCAA+AGG | - | chr6_2:14694995-14695014 | None:intergenic | 25.0% |
| ! | GAAGACTTATAAGAATTGTT+CGG | + | chr6_2:14695170-14695189 | Msa0910420:intron | 25.0% |
| ! | AAAATCGGACATATACAATT+TGG | + | chr6_2:14695637-14695656 | Msa0910420:intron | 25.0% |
| !!! | CATTATGTTATTTTGAATGG+TGG | - | chr6_2:14695684-14695703 | None:intergenic | 25.0% |
| ! | CACCATTCAAAATAACATAA+TGG | + | chr6_2:14695682-14695701 | Msa0910420:intron | 25.0% |
| !!! | ACCCATTATGTTATTTTGAA+TGG | - | chr6_2:14695687-14695706 | None:intergenic | 25.0% |
| !!! | ATTTTTCTGGGATAAAGTAA+TGG | + | chr6_2:14695887-14695906 | Msa0910420:CDS | 25.0% |
| ! | ATGGAAGGTGATAAAATTAT+TGG | + | chr6_2:14695906-14695925 | Msa0910420:CDS | 25.0% |
| ! | CAAGAAATTAGAAAGTAGAA+AGG | - | chr6_2:14695983-14696002 | None:intergenic | 25.0% |
| ! | CTTTCTACTTTCTAATTTCT+TGG | + | chr6_2:14695981-14696000 | Msa0910420:intron | 25.0% |
| ! | AACAATTATAACTGTGACAA+TGG | - | chr6_2:14696503-14696522 | None:intergenic | 25.0% |
| !! | AGCGAAATAAAATTTTACGA+AGG | + | chr6_2:14696545-14696564 | Msa0910420:intron | 25.0% |
| ! | CTTGAATCCATTATTATCAT+TGG | + | chr6_2:14696573-14696592 | Msa0910420:intron | 25.0% |
| ! | TTATGTCAAACCTACAATAT+CGG | - | chr6_2:14696716-14696735 | None:intergenic | 25.0% |
| !!! | CGATTTTTTATAATGGGAAT+TGG | + | chr6_2:14696771-14696790 | Msa0910420:intron | 25.0% |
| !! | AAAATGGGAATTGGATTTTT+GGG | + | chr6_2:14696851-14696870 | Msa0910420:CDS | 25.0% |
| ! | AAGTTTCTTAATACAGTTCA+AGG | - | chr6_2:14696960-14696979 | None:intergenic | 25.0% |
| ! | AAGTTATCAATAACTACTAG+TGG | + | chr6_2:14697181-14697200 | Msa0910420:intron | 25.0% |
| ! | TTGAGAACTGTTAAAATTCA+AGG | - | chr6_2:14697268-14697287 | None:intergenic | 25.0% |
| !! | TATTTGTTACCATATAGAAG+AGG | + | chr6_2:14697353-14697372 | Msa0910420:intron | 25.0% |
| ! | ATTCTAATTATCTACCTGTT+GGG | + | chr6_2:14697471-14697490 | Msa0910420:intron | 25.0% |
| !! | AGACAAATTAAAAGTATGGT+TGG | + | chr6_2:14697573-14697592 | Msa0910420:intron | 25.0% |
| ! | TCATGATTACACCATAAATA+TGG | + | chr6_2:14697696-14697715 | Msa0910420:intron | 25.0% |
| ! | AAAATACTAGTAGAATAGAG+TGG | - | chr6_2:14697977-14697996 | None:intergenic | 25.0% |
| ! | ATATTAACCTAAACTCTTAC+AGG | + | chr6_2:14698358-14698377 | Msa0910420:intron | 25.0% |
| ! | AAAGAATCATCGAAAACAAA+AGG | - | chr6_2:14698735-14698754 | None:intergenic | 25.0% |
| !!! | TTTGTTTTCGATGATTCTTT+CGG | + | chr6_2:14698735-14698754 | Msa0910420:CDS | 25.0% |
| ! | AAGATTACTGAATCACTAAA+AGG | - | chr6_2:14698826-14698845 | None:intergenic | 25.0% |
| ! | TCTTGTCATCTTAGTTAATT+AGG | + | chr6_2:14699070-14699089 | Msa0910420:intron | 25.0% |
| !!! | TTTGTTTTTGTTTTTGCTGT+AGG | + | chr6_2:14699165-14699184 | Msa0910420:intron | 25.0% |
| ! | AATTACCATCTCTTAATGAT+TGG | + | chr6_2:14699224-14699243 | Msa0910420:CDS | 25.0% |
| ! | ATTACCATCTCTTAATGATT+GGG | + | chr6_2:14699225-14699244 | Msa0910420:CDS | 25.0% |
| ! | TTGTGTTTATGGTAACAAAA+TGG | - | chr6_2:14699350-14699369 | None:intergenic | 25.0% |
| ! | TAGAGTAATGTTTGTGTTTA+TGG | - | chr6_2:14699361-14699380 | None:intergenic | 25.0% |
| ! | AAAGCACATAAACTTATCAT+TGG | - | chr6_2:14699434-14699453 | None:intergenic | 25.0% |
| ! | TACAAAAATCATGTAGTAGA+AGG | - | chr6_2:14699481-14699500 | None:intergenic | 25.0% |
| ! | TACAAATGAAAGATATTGCA+AGG | - | chr6_2:14699827-14699846 | None:intergenic | 25.0% |
| ! | CTATAAACGTTGTATTTAAG+AGG | - | chr6_2:14699974-14699993 | None:intergenic | 25.0% |
| ! | GCTGAAAAATATTATTTACC+CGG | + | chr6_2:14700178-14700197 | Msa0910420:intron | 25.0% |
| ! | TAAATTTGTAAACTGACAAC+TGG | + | chr6_2:14700236-14700255 | Msa0910420:intron | 25.0% |
| ! | ACAATATAGCAAAATGACTT+AGG | + | chr6_2:14700522-14700541 | Msa0910420:intron | 25.0% |
| ! | TTTAATGACATTTATGTCCT+CGG | - | chr6_2:14700633-14700652 | None:intergenic | 25.0% |
| ! | TTAAACATCTAACTACCATT+AGG | + | chr6_2:14700648-14700667 | Msa0910420:intron | 25.0% |
| !! | ATTAGTATGTTTTCATGTAG+GGG | - | chr6_2:14700768-14700787 | None:intergenic | 25.0% |
| !! | CATTAGTATGTTTTCATGTA+GGG | - | chr6_2:14700769-14700788 | None:intergenic | 25.0% |
| ! | AAACATACTAATGGAAATTC+AGG | + | chr6_2:14700776-14700795 | Msa0910420:intron | 25.0% |
| ! | TCCACAAATCATATTTCAAT+TGG | + | chr6_2:14701134-14701153 | Msa0910420:intron | 25.0% |
| ! | TCCAATTGAAATATGATTTG+TGG | - | chr6_2:14701138-14701157 | None:intergenic | 25.0% |
| !!! | TTAGCTGTTTTGGTAATAAA+AGG | - | chr6_2:14701269-14701288 | None:intergenic | 25.0% |
| !! | GAGTCTAATATTTTATGTGA+TGG | + | chr6_2:14701311-14701330 | Msa0910420:intron | 25.0% |
| !! | CTAATATTTTATGTGATGGT+AGG | + | chr6_2:14701315-14701334 | Msa0910420:intron | 25.0% |
| ! | ATCTATTGATCATGTATATG+AGG | + | chr6_2:14701389-14701408 | Msa0910420:CDS | 25.0% |
| !! | TATGAGGAATTGCTTTATTA+AGG | + | chr6_2:14701405-14701424 | Msa0910420:CDS | 25.0% |
| !!! | TATGTCTGCTTTTAGATATA+TGG | + | chr6_2:14701492-14701511 | Msa0910420:three_prime_UTR | 25.0% |
| ! | ATGAGATTCTGTTTTGTAAG+TGG | - | chr6_2:14694234-14694253 | None:intergenic | 30.0% |
| GTTGTAAAACCAAGGATAAA+TGG | + | chr6_2:14694271-14694290 | Msa0910420:CDS | 30.0% | |
| !!! | TCTTTTTCGAAAACTTTGTG+GGG | - | chr6_2:14694345-14694364 | None:intergenic | 30.0% |
| !!! | CGTTTCGTTTTTTTCAAGTT+TGG | - | chr6_2:14694489-14694508 | None:intergenic | 30.0% |
| ACTATCAATTCCTTATGTCA+TGG | - | chr6_2:14694560-14694579 | None:intergenic | 30.0% | |
| GAGGGTAAAATAATGACTTA+TGG | - | chr6_2:14694964-14694983 | None:intergenic | 30.0% | |
| CATTTCATTCTGATGTGATT+CGG | - | chr6_2:14695110-14695129 | None:intergenic | 30.0% | |
| ACTGTAGATTTCTTATGGAA+TGG | - | chr6_2:14695236-14695255 | None:intergenic | 30.0% | |
| GCTTAACTGTAGATTTCTTA+TGG | - | chr6_2:14695241-14695260 | None:intergenic | 30.0% | |
| !! | CAAAATAACATAATGGGTAC+TGG | + | chr6_2:14695689-14695708 | Msa0910420:intron | 30.0% |
| CATTTGTCTATGACTAAATG+AGG | + | chr6_2:14695740-14695759 | Msa0910420:intron | 30.0% | |
| GCTATTTGCTCATACTTAAT+AGG | - | chr6_2:14695840-14695859 | None:intergenic | 30.0% | |
| CAAATAGCAGAATTGCTAAA+TGG | + | chr6_2:14695852-14695871 | Msa0910420:CDS | 30.0% | |
| TTTCACATTATGGGAATTCT+AGG | + | chr6_2:14696059-14696078 | Msa0910420:intron | 30.0% | |
| TTCACATTATGGGAATTCTA+GGG | + | chr6_2:14696060-14696079 | Msa0910420:intron | 30.0% | |
| !!! | AGAATTTTTCAAGACACATG+TGG | - | chr6_2:14696374-14696393 | None:intergenic | 30.0% |
| GGTAGATCCAATGATAATAA+TGG | - | chr6_2:14696583-14696602 | None:intergenic | 30.0% | |
| TCTCTTTATAAACTCTTCTC+AGG | - | chr6_2:14696626-14696645 | None:intergenic | 30.0% | |
| TGAGAAGAGTTTATAAAGAG+AGG | + | chr6_2:14696625-14696644 | Msa0910420:intron | 30.0% | |
| GAGAAGAGTTTATAAAGAGA+GGG | + | chr6_2:14696626-14696645 | Msa0910420:intron | 30.0% | |
| TGTAGGTTTGACATAATAGA+TGG | + | chr6_2:14696720-14696739 | Msa0910420:intron | 30.0% | |
| GACAAGCTAGTATCAAAATT+TGG | - | chr6_2:14696746-14696765 | None:intergenic | 30.0% | |
| CCTACGAAAAGAAATATGTA+AGG | - | chr6_2:14696814-14696833 | None:intergenic | 30.0% | |
| ! | CCTTACATATTTCTTTTCGT+AGG | + | chr6_2:14696811-14696830 | Msa0910420:intron | 30.0% |
| ! | GAAAATGGGAATTGGATTTT+TGG | + | chr6_2:14696850-14696869 | Msa0910420:CDS | 30.0% |
| ! | AAATGGGAATTGGATTTTTG+GGG | + | chr6_2:14696852-14696871 | Msa0910420:CDS | 30.0% |
| AAAACTACCTTTGGTATCAT+AGG | - | chr6_2:14696914-14696933 | None:intergenic | 30.0% | |
| GGAGAAATAAAAACTACCTT+TGG | - | chr6_2:14696923-14696942 | None:intergenic | 30.0% | |
| ! | TATTGATAACTTAGAAGCGA+CGG | - | chr6_2:14697173-14697192 | None:intergenic | 30.0% |
| ATGTGTGGTAACAAATATCA+AGG | - | chr6_2:14697421-14697440 | None:intergenic | 30.0% | |
| CATTCTAATTATCTACCTGT+TGG | + | chr6_2:14697470-14697489 | Msa0910420:intron | 30.0% | |
| TTCTAATTATCTACCTGTTG+GGG | + | chr6_2:14697472-14697491 | Msa0910420:intron | 30.0% | |
| ACAGGGTTTATCCATATTTA+TGG | - | chr6_2:14697710-14697729 | None:intergenic | 30.0% | |
| GTCTTGAAATTTGTCTCAAA+TGG | - | chr6_2:14697743-14697762 | None:intergenic | 30.0% | |
| ! | TTTTCCCCATTGTTAAGAAT+TGG | - | chr6_2:14697826-14697845 | None:intergenic | 30.0% |
| AATCATTCATTTCGTCACTT+TGG | + | chr6_2:14697926-14697945 | Msa0910420:intron | 30.0% | |
| CACTTCTATGCTGTTAAAAA+AGG | - | chr6_2:14698025-14698044 | None:intergenic | 30.0% | |
| !!! | CTTTTTTAACAGCATAGAAG+TGG | + | chr6_2:14698023-14698042 | Msa0910420:intron | 30.0% |
| CTTTAATGGTTCAATTCAAC+TGG | + | chr6_2:14698123-14698142 | Msa0910420:intron | 30.0% | |
| TCTCTAACTTTGCTTGATTA+AGG | + | chr6_2:14698634-14698653 | Msa0910420:intron | 30.0% | |
| TATTTGGACTGATGTTGATA+AGG | + | chr6_2:14698692-14698711 | Msa0910420:CDS | 30.0% | |
| ! | TTGTTTTCGATGATTCTTTC+GGG | + | chr6_2:14698736-14698755 | Msa0910420:CDS | 30.0% |
| !!! | TGCATTTTCATGCATTGATT+TGG | + | chr6_2:14698884-14698903 | Msa0910420:intron | 30.0% |
| ! | TTTTCAAACTCTCTAATTGC+AGG | + | chr6_2:14698933-14698952 | Msa0910420:intron | 30.0% |
| ! | TTCCAATGTGTTTTGTCTAT+CGG | + | chr6_2:14698987-14699006 | Msa0910420:CDS | 30.0% |
| ATTAAGAGATGGTAATTCAC+CGG | - | chr6_2:14699221-14699240 | None:intergenic | 30.0% | |
| TAATGATTGGGAGAATCATT+TGG | + | chr6_2:14699237-14699256 | Msa0910420:CDS | 30.0% | |
| AATGATTGGGAGAATCATTT+GGG | + | chr6_2:14699238-14699257 | Msa0910420:CDS | 30.0% | |
| !!! | TCCTGAGGTTTGTTTTATAT+TGG | + | chr6_2:14699270-14699289 | Msa0910420:intron | 30.0% |
| ACCAATATAAAACAAACCTC+AGG | - | chr6_2:14699274-14699293 | None:intergenic | 30.0% | |
| GATAAGTTTATGTGCTTTAC+CGG | + | chr6_2:14699436-14699455 | Msa0910420:CDS | 30.0% | |
| TTCTATGAACTGCTTCAATT+TGG | + | chr6_2:14699660-14699679 | Msa0910420:intron | 30.0% | |
| ! | GTAATTTTTCTGATTGTTCC+AGG | + | chr6_2:14699698-14699717 | Msa0910420:intron | 30.0% |
| TATTAGATTTGACAGCAGAT+TGG | + | chr6_2:14699757-14699776 | Msa0910420:CDS | 30.0% | |
| !! | TCTAGCTTACTTAAGCTTTT+AGG | - | chr6_2:14699858-14699877 | None:intergenic | 30.0% |
| ATTAAATACAACAGTCAAGC+AGG | + | chr6_2:14699905-14699924 | Msa0910420:intron | 30.0% | |
| !!! | ATTGGTTTTGTAATCCAGAA+AGG | - | chr6_2:14699951-14699970 | None:intergenic | 30.0% |
| AACGTTGTATTTAAGAGGAT+TGG | - | chr6_2:14699969-14699988 | None:intergenic | 30.0% | |
| ! | CCATTTTCATTTGACACTTT+TGG | - | chr6_2:14700075-14700094 | None:intergenic | 30.0% |
| !! | CCAAAAGTGTCAAATGAAAA+TGG | + | chr6_2:14700072-14700091 | Msa0910420:intron | 30.0% |
| ATTAAATTAATGCTACTGGC+CGG | - | chr6_2:14700200-14700219 | None:intergenic | 30.0% | |
| AACTCAAACTTGAGTCATTA+AGG | - | chr6_2:14700561-14700580 | None:intergenic | 30.0% | |
| ! | CCATTAGTATGTTTTCATGT+AGG | - | chr6_2:14700770-14700789 | None:intergenic | 30.0% |
| CCTACATGAAAACATACTAA+TGG | + | chr6_2:14700767-14700786 | Msa0910420:intron | 30.0% | |
| CTGGTTGTGATATGAATATT+AGG | + | chr6_2:14700805-14700824 | Msa0910420:intron | 30.0% | |
| ! | ATTTTTGAATGTAGTAGCTG+AGG | + | chr6_2:14700936-14700955 | Msa0910420:CDS | 30.0% |
| GATAGTCTATAGCTGAAATA+AGG | - | chr6_2:14701021-14701040 | None:intergenic | 30.0% | |
| TATTAACATGATAAGGCACA+CGG | - | chr6_2:14701067-14701086 | None:intergenic | 30.0% | |
| ACAATGCAAGTAGAGAATTT+GGG | - | chr6_2:14701213-14701232 | None:intergenic | 30.0% | |
| ! | CTAATGCAATCTGTTTTCTT+TGG | + | chr6_2:14701285-14701304 | Msa0910420:intron | 30.0% |
| ACAAACATTCTACCCAAAAA+GGG | - | chr6_2:14701447-14701466 | None:intergenic | 30.0% | |
| TACAAACATTCTACCCAAAA+AGG | - | chr6_2:14701448-14701467 | None:intergenic | 30.0% | |
| GTAGAATGTTTGTAAAACCT+AGG | + | chr6_2:14701454-14701473 | Msa0910420:three_prime_UTR | 30.0% | |
| !! | TAAAGAGAGGGTGTTTGAAA+TGG | - | chr6_2:14694109-14694128 | None:intergenic | 35.0% |
| GTTGGTTGAAGATAAAGAGA+GGG | - | chr6_2:14694121-14694140 | None:intergenic | 35.0% | |
| AGTTGGTTGAAGATAAAGAG+AGG | - | chr6_2:14694122-14694141 | None:intergenic | 35.0% | |
| ! | TTGTTAGTTTCAATGACCGT+AGG | + | chr6_2:14694154-14694173 | Msa0910420:CDS | 35.0% |
| ! | TGTTAGTTTCAATGACCGTA+GGG | + | chr6_2:14694155-14694174 | Msa0910420:CDS | 35.0% |
| !! | CTCATCGATTATTTTGTCTC+TGG | + | chr6_2:14694249-14694268 | Msa0910420:CDS | 35.0% |
| GTAAAACCAAGGATAAATGG+AGG | + | chr6_2:14694274-14694293 | Msa0910420:CDS | 35.0% | |
| !!! | CTTTTTCGAAAACTTTGTGG+GGG | - | chr6_2:14694344-14694363 | None:intergenic | 35.0% |
| CCGTGTATGGTGAAAATAAA+CGG | - | chr6_2:14694528-14694547 | None:intergenic | 35.0% | |
| !! | CCGTTTATTTTCACCATACA+CGG | + | chr6_2:14694525-14694544 | Msa0910420:intron | 35.0% |
| GTCATGATTTCCATGACATA+AGG | + | chr6_2:14694547-14694566 | Msa0910420:intron | 35.0% | |
| ! | GTGCATTTTTGCAATTCTTG+TGG | + | chr6_2:14694611-14694630 | Msa0910420:intron | 35.0% |
| TCTCAATGACCCAAATAGTA+TGG | + | chr6_2:14694730-14694749 | Msa0910420:intron | 35.0% | |
| ATCTCTGGTCCATACTATTT+GGG | - | chr6_2:14694742-14694761 | None:intergenic | 35.0% | |
| TATCTCTGGTCCATACTATT+TGG | - | chr6_2:14694743-14694762 | None:intergenic | 35.0% | |
| CGAATCACATCAGAATGAAA+TGG | + | chr6_2:14695108-14695127 | Msa0910420:intron | 35.0% | |
| ! | TGCTTGTCTTGGAACAATTT+TGG | + | chr6_2:14695262-14695281 | Msa0910420:intron | 35.0% |
| ! | GCTTGTCTTGGAACAATTTT+GGG | + | chr6_2:14695263-14695282 | Msa0910420:intron | 35.0% |
| !!! | TCTTGGAACAATTTTGGGAT+GGG | + | chr6_2:14695268-14695287 | Msa0910420:intron | 35.0% |
| ! | GGTACTGAACATGAAAAGTT+TGG | + | chr6_2:14695792-14695811 | Msa0910420:CDS | 35.0% |
| ! | CATTGCTGAGAGATTTTTCT+GGG | + | chr6_2:14695875-14695894 | Msa0910420:CDS | 35.0% |
| !! | TTCTGGGATAAAGTAATGGA+AGG | + | chr6_2:14695891-14695910 | Msa0910420:CDS | 35.0% |
| TTCTTCATAAGTCTGATGCA+GGG | - | chr6_2:14696148-14696167 | None:intergenic | 35.0% | |
| TTTCTTCATAAGTCTGATGC+AGG | - | chr6_2:14696149-14696168 | None:intergenic | 35.0% | |
| ATGCAAGACTAACTTGATAG+AGG | - | chr6_2:14696182-14696201 | None:intergenic | 35.0% | |
| TGTGGCTAAAAAATAGGAAG+TGG | + | chr6_2:14696321-14696340 | Msa0910420:intron | 35.0% | |
| ATCATTGGATCTACCGAAAT+CGG | + | chr6_2:14696588-14696607 | Msa0910420:intron | 35.0% | |
| GAATCCTATCTATCCGATTT+CGG | - | chr6_2:14696604-14696623 | None:intergenic | 35.0% | |
| !! | CCTTACAAAACCGACTTTTA+TGG | - | chr6_2:14696661-14696680 | None:intergenic | 35.0% |
| !! | CCATAAAAGTCGGTTTTGTA+AGG | + | chr6_2:14696658-14696677 | Msa0910420:intron | 35.0% |
| !!! | AGACACCGATTTTCTTTACA+TGG | + | chr6_2:14696688-14696707 | Msa0910420:intron | 35.0% |
| TAAAGCTGTTGCTGAGAAAA+TGG | + | chr6_2:14696835-14696854 | Msa0910420:CDS | 35.0% | |
| AAAGCTGTTGCTGAGAAAAT+GGG | + | chr6_2:14696836-14696855 | Msa0910420:CDS | 35.0% | |
| ! | AATAACTACTAGTGGTGATG+TGG | + | chr6_2:14697189-14697208 | Msa0910420:intron | 35.0% |
| TTTAACAGTTCTCAACAAGC+TGG | + | chr6_2:14697273-14697292 | Msa0910420:intron | 35.0% | |
| !!! | TGGTTTTGTAAGGATGAGTT+AGG | + | chr6_2:14697395-14697414 | Msa0910420:intron | 35.0% |
| GAATGTTGACAATGCATTTG+TGG | - | chr6_2:14697455-14697474 | None:intergenic | 35.0% | |
| TCTAATTATCTACCTGTTGG+GGG | + | chr6_2:14697473-14697492 | Msa0910420:intron | 35.0% | |
| AGATCAAAAAATGTACCTGC+TGG | + | chr6_2:14697497-14697516 | Msa0910420:intron | 35.0% | |
| GATCAAAAAATGTACCTGCT+GGG | + | chr6_2:14697498-14697517 | Msa0910420:intron | 35.0% | |
| ATCAAAAAATGTACCTGCTG+GGG | + | chr6_2:14697499-14697518 | Msa0910420:intron | 35.0% | |
| CAAATGGTAGAAACATGACA+GGG | - | chr6_2:14697727-14697746 | None:intergenic | 35.0% | |
| TCAAATGGTAGAAACATGAC+AGG | - | chr6_2:14697728-14697747 | None:intergenic | 35.0% | |
| ATTTCAAGACTTCATCCTTG+AGG | + | chr6_2:14697753-14697772 | Msa0910420:intron | 35.0% | |
| ACGAGCCAATTCTTAACAAT+GGG | + | chr6_2:14697818-14697837 | Msa0910420:intron | 35.0% | |
| CAATGGGGAAAAAAAACTAG+AGG | + | chr6_2:14697834-14697853 | Msa0910420:intron | 35.0% | |
| AGAGGAAAAATCATCTCACA+AGG | - | chr6_2:14697876-14697895 | None:intergenic | 35.0% | |
| TACTAGTAGAATAGAGTGGT+GGG | - | chr6_2:14697973-14697992 | None:intergenic | 35.0% | |
| ATACTAGTAGAATAGAGTGG+TGG | - | chr6_2:14697974-14697993 | None:intergenic | 35.0% | |
| GTTAAAAAAGGTGATCGTGT+TGG | - | chr6_2:14698013-14698032 | None:intergenic | 35.0% | |
| TATATGGAGCAAGTCATGTT+AGG | + | chr6_2:14698081-14698100 | Msa0910420:intron | 35.0% | |
| !! | TCTGAATTTTTGTTGTGCTC+AGG | + | chr6_2:14698152-14698171 | Msa0910420:intron | 35.0% |
| AACAAATACATGCCCAAAGT+TGG | + | chr6_2:14698192-14698211 | Msa0910420:CDS | 35.0% | |
| AGATTGACCTGTAAGAGTTT+AGG | - | chr6_2:14698368-14698387 | None:intergenic | 35.0% | |
| TAAACTCTTACAGGTCAATC+TGG | + | chr6_2:14698367-14698386 | Msa0910420:intron | 35.0% | |
| AAGATCTAAGAAAAGCCATG+AGG | - | chr6_2:14698799-14698818 | None:intergenic | 35.0% | |
| TTCCGATAGACAAAACACAT+TGG | - | chr6_2:14698992-14699011 | None:intergenic | 35.0% | |
| TACAAGTTACATGAACAGCA+GGG | - | chr6_2:14699109-14699128 | None:intergenic | 35.0% | |
| ACAAAAACAGTCAATTCGCT+CGG | - | chr6_2:14699150-14699169 | None:intergenic | 35.0% | |
| TTAAGAGATGGTAATTCACC+GGG | - | chr6_2:14699220-14699239 | None:intergenic | 35.0% | |
| TTCTCCCAATCATTAAGAGA+TGG | - | chr6_2:14699232-14699251 | None:intergenic | 35.0% | |
| ACACAAACATTACTCTATCC+AGG | + | chr6_2:14699364-14699383 | Msa0910420:intron | 35.0% | |
| AAGAGATATTTGGAGATGAG+AGG | + | chr6_2:14699395-14699414 | Msa0910420:CDS | 35.0% | |
| AAGATAGATCCTCTCAGAAT+AGG | - | chr6_2:14699535-14699554 | None:intergenic | 35.0% | |
| ACTAAGAAGGATCGGATATA+TGG | - | chr6_2:14699587-14699606 | None:intergenic | 35.0% | |
| ATATATCCGATCCTTCTTAG+TGG | + | chr6_2:14699586-14699605 | Msa0910420:intron | 35.0% | |
| ! | TTTTTCTGATTGTTCCAGGT+AGG | + | chr6_2:14699702-14699721 | Msa0910420:intron | 35.0% |
| ! | TTTTCTGATTGTTCCAGGTA+GGG | + | chr6_2:14699703-14699722 | Msa0910420:intron | 35.0% |
| CATCATATAATAACCCTACC+TGG | - | chr6_2:14699719-14699738 | None:intergenic | 35.0% | |
| AAGACAAATGCTGAGGAATA+AGG | + | chr6_2:14699791-14699810 | Msa0910420:CDS | 35.0% | |
| TGTAATCCAGAAAGGATTAG+TGG | - | chr6_2:14699943-14699962 | None:intergenic | 35.0% | |
| CCTTCTACAAAGAGTTCAAA+GGG | - | chr6_2:14700028-14700047 | None:intergenic | 35.0% | |
| ACCTTCTACAAAGAGTTCAA+AGG | - | chr6_2:14700029-14700048 | None:intergenic | 35.0% | |
| TTAAATTAATGCTACTGGCC+GGG | - | chr6_2:14700199-14700218 | None:intergenic | 35.0% | |
| TATAGCAAAATGACTTAGGC+AGG | + | chr6_2:14700526-14700545 | Msa0910420:intron | 35.0% | |
| ATGTATCACAATTATCTGCC+TGG | - | chr6_2:14700674-14700693 | None:intergenic | 35.0% | |
| CTTCCATCAACAATATCTAC+AGG | + | chr6_2:14700879-14700898 | Msa0910420:intron | 35.0% | |
| CATCCTGTAGATATTGTTGA+TGG | - | chr6_2:14700885-14700904 | None:intergenic | 35.0% | |
| CATCAACAATATCTACAGGA+TGG | + | chr6_2:14700883-14700902 | Msa0910420:intron | 35.0% | |
| CAATGCAAGTAGAGAATTTG+GGG | - | chr6_2:14701212-14701231 | None:intergenic | 35.0% | |
| CACAATGCAAGTAGAGAATT+TGG | - | chr6_2:14701214-14701233 | None:intergenic | 35.0% | |
| ! | ACAGATTGCATTAGCTGTTT+TGG | - | chr6_2:14701279-14701298 | None:intergenic | 35.0% |
| TGGAATTGTATCATGGAAAG+TGG | + | chr6_2:14701361-14701380 | Msa0910420:CDS | 35.0% | |
| ! | ATTGTTCAAACCACCCTTTT+TGG | + | chr6_2:14701431-14701450 | Msa0910420:three_prime_UTR | 35.0% |
| ! | TTGTTCAAACCACCCTTTTT+GGG | + | chr6_2:14701432-14701451 | Msa0910420:three_prime_UTR | 35.0% |
| ATCTAAAAGCAGACATAACC+AGG | - | chr6_2:14701489-14701508 | None:intergenic | 35.0% | |
| TGTCTCTGGTTGTAAAACCA+AGG | + | chr6_2:14694263-14694282 | Msa0910420:CDS | 40.0% | |
| GAGTTACCTCCATTTATCCT+TGG | - | chr6_2:14694283-14694302 | None:intergenic | 40.0% | |
| ATGGAAATCATGACCGTGTA+TGG | - | chr6_2:14694541-14694560 | None:intergenic | 40.0% | |
| TTACCCTCTAATTGCTCCTT+TGG | + | chr6_2:14694976-14694995 | Msa0910420:intron | 40.0% | |
| TTGCCAAAGGAGCAATTAGA+GGG | - | chr6_2:14694982-14695001 | None:intergenic | 40.0% | |
| ATTGCCAAAGGAGCAATTAG+AGG | - | chr6_2:14694983-14695002 | None:intergenic | 40.0% | |
| !! | GTCTTGGAACAATTTTGGGA+TGG | + | chr6_2:14695267-14695286 | Msa0910420:intron | 40.0% |
| !!! | TTTTGGGATGGGTGACTTTA+TGG | + | chr6_2:14695279-14695298 | Msa0910420:intron | 40.0% |
| !! | AAAAGACTCGTGTTGGTTTG+TGG | + | chr6_2:14695343-14695362 | Msa0910420:intron | 40.0% |
| !! | AAAGACTCGTGTTGGTTTGT+GGG | + | chr6_2:14695344-14695363 | Msa0910420:intron | 40.0% |
| TTCATGTCCTCTTGCAGAAT+AGG | + | chr6_2:14695771-14695790 | Msa0910420:intron | 40.0% | |
| TTCAGTACCTATTCTGCAAG+AGG | - | chr6_2:14695781-14695800 | None:intergenic | 40.0% | |
| ! | GCATTGCTGAGAGATTTTTC+TGG | + | chr6_2:14695874-14695893 | Msa0910420:CDS | 40.0% |
| GGGCAAGCAAAACATATCAT+TGG | + | chr6_2:14696080-14696099 | Msa0910420:intron | 40.0% | |
| CAAAACATATCATTGGAGCC+AGG | + | chr6_2:14696087-14696106 | Msa0910420:CDS | 40.0% | |
| GGCAAATAGTGCATTGTGAT+TGG | - | chr6_2:14696287-14696306 | None:intergenic | 40.0% | |
| GCACTATTTGCCACAATTCA+AGG | + | chr6_2:14696295-14696314 | Msa0910420:intron | 40.0% | |
| CTATTTGCCACAATTCAAGG+AGG | + | chr6_2:14696298-14696317 | Msa0910420:intron | 40.0% | |
| ! | AGGAGGTGTGGCTAAAAAAT+AGG | + | chr6_2:14696315-14696334 | Msa0910420:intron | 40.0% |
| TCTACCGAAATCGGATAGAT+AGG | + | chr6_2:14696597-14696616 | Msa0910420:intron | 40.0% | |
| GCACTCTTCACCATAAAAGT+CGG | + | chr6_2:14696648-14696667 | Msa0910420:intron | 40.0% | |
| !! | CGGTGCCATGTAAAGAAAAT+CGG | - | chr6_2:14696696-14696715 | None:intergenic | 40.0% |
| !! | TTACATGGCACCGATATTGT+AGG | + | chr6_2:14696703-14696722 | Msa0910420:intron | 40.0% |
| GTTGCTGAGAAAATGGGAAT+TGG | + | chr6_2:14696842-14696861 | Msa0910420:CDS | 40.0% | |
| !! | GGAATTGGATTTTTGGGGAT+AGG | + | chr6_2:14696857-14696876 | Msa0910420:CDS | 40.0% |
| ATGTCTTTGAGTCCAGACTT+TGG | - | chr6_2:14696890-14696909 | None:intergenic | 40.0% | |
| AGACATGCCTATGATACCAA+AGG | + | chr6_2:14696904-14696923 | Msa0910420:CDS | 40.0% | |
| TTCAAGGACATGCAACAATG+AGG | - | chr6_2:14696944-14696963 | None:intergenic | 40.0% | |
| TGATCTTCTGTGGATCAACA+TGG | - | chr6_2:14697107-14697126 | None:intergenic | 40.0% | |
| ! | GGTTAGGAAACAGTTAGCTT+AGG | - | chr6_2:14697133-14697152 | None:intergenic | 40.0% |
| TATGACTGTTAGAGGTGGTT+AGG | - | chr6_2:14697149-14697168 | None:intergenic | 40.0% | |
| !! | GGAAGAAGAGACGCTATTTT+AGG | - | chr6_2:14697247-14697266 | None:intergenic | 40.0% |
| TTTATCTACCATGCCTAGCT+TGG | + | chr6_2:14697305-14697324 | Msa0910420:intron | 40.0% | |
| CCTTACAAAACCAGCTTGTA+CGG | - | chr6_2:14697388-14697407 | None:intergenic | 40.0% | |
| !!! | TTTTTTGATCTTCCCCCAAC+AGG | - | chr6_2:14697488-14697507 | None:intergenic | 40.0% |
| TCAAAAAATGTACCTGCTGG+GGG | + | chr6_2:14697500-14697519 | Msa0910420:intron | 40.0% | |
| ! | CAAGCTTGAAGTTTTCCTCA+AGG | - | chr6_2:14697771-14697790 | None:intergenic | 40.0% |
| CACGAGCCAATTCTTAACAA+TGG | + | chr6_2:14697817-14697836 | Msa0910420:intron | 40.0% | |
| CGAGCCAATTCTTAACAATG+GGG | + | chr6_2:14697819-14697838 | Msa0910420:intron | 40.0% | |
| GGGAAAAAAAACTAGAGGCA+TGG | + | chr6_2:14697839-14697858 | Msa0910420:intron | 40.0% | |
| GCTGTTGCTATCTGTTATGA+AGG | - | chr6_2:14698524-14698543 | None:intergenic | 40.0% | |
| GCAAATTCACCCTTCACAAA+TGG | + | chr6_2:14698551-14698570 | Msa0910420:CDS | 40.0% | |
| TTGGGCTTTCCATTTGTGAA+GGG | - | chr6_2:14698563-14698582 | None:intergenic | 40.0% | |
| ATTGGGCTTTCCATTTGTGA+AGG | - | chr6_2:14698564-14698583 | None:intergenic | 40.0% | |
| TTCACAAATGGAAAGCCCAA+TGG | + | chr6_2:14698563-14698582 | Msa0910420:CDS | 40.0% | |
| TCACAAATGGAAAGCCCAAT+GGG | + | chr6_2:14698564-14698583 | Msa0910420:CDS | 40.0% | |
| CTCATACTGACAAACCCATT+GGG | - | chr6_2:14698581-14698600 | None:intergenic | 40.0% | |
| TCTCATACTGACAAACCCAT+TGG | - | chr6_2:14698582-14698601 | None:intergenic | 40.0% | |
| ATGGGTTTGTCAGTATGAGA+AGG | + | chr6_2:14698582-14698601 | Msa0910420:CDS | 40.0% | |
| GTTCCTAATATTAGGCCTCA+TGG | + | chr6_2:14698781-14698800 | Msa0910420:intron | 40.0% | |
| AAGCCATGAGGCCTAATATT+AGG | - | chr6_2:14698787-14698806 | None:intergenic | 40.0% | |
| CTACAAGTTACATGAACAGC+AGG | - | chr6_2:14699110-14699129 | None:intergenic | 40.0% | |
| !! | GTTTTTGCTGTAGGACTTCT+TGG | + | chr6_2:14699174-14699193 | Msa0910420:intron | 40.0% |
| TTTGGGCACTATATTTCCTG+AGG | + | chr6_2:14699255-14699274 | Msa0910420:CDS | 40.0% | |
| AACATTACTCTATCCAGGTC+AGG | + | chr6_2:14699369-14699388 | Msa0910420:intron | 40.0% | |
| AATATCTCTTTAGCCTGACC+TGG | - | chr6_2:14699385-14699404 | None:intergenic | 40.0% | |
| GGTCAGGCTAAAGAGATATT+TGG | + | chr6_2:14699385-14699404 | Msa0910420:intron | 40.0% | |
| ! | TATGTGCTTTACCGGCATTT+TGG | + | chr6_2:14699444-14699463 | Msa0910420:CDS | 40.0% |
| ! | ATGTGCTTTACCGGCATTTT+GGG | + | chr6_2:14699445-14699464 | Msa0910420:CDS | 40.0% |
| GTCACATAACCTATTCTGAG+AGG | + | chr6_2:14699523-14699542 | Msa0910420:intron | 40.0% | |
| CCTTATCCACTAAGAAGGAT+CGG | - | chr6_2:14699595-14699614 | None:intergenic | 40.0% | |
| ! | CTAAGCCTTATCCACTAAGA+AGG | - | chr6_2:14699600-14699619 | None:intergenic | 40.0% |
| CAGAAGAAAGACAAATGCTG+AGG | + | chr6_2:14699784-14699803 | Msa0910420:CDS | 40.0% | |
| GCTAGATAGAGTCCCAAAAA+CGG | + | chr6_2:14699872-14699891 | Msa0910420:intron | 40.0% | |
| CCCTTTGAACTCTTTGTAGA+AGG | + | chr6_2:14700025-14700044 | Msa0910420:intron | 40.0% | |
| !!! | TTTTGGTTTCCTAGCACTAG+AGG | - | chr6_2:14700058-14700077 | None:intergenic | 40.0% |
| ! | TGGTGTCTTTAGACCAGTTT+TGG | - | chr6_2:14700280-14700299 | None:intergenic | 40.0% |
| CTAAAGACACCATTTCGAGA+TGG | + | chr6_2:14700288-14700307 | Msa0910420:CDS | 40.0% | |
| TTCAGCAAACCATCTCGAAA+TGG | - | chr6_2:14700300-14700319 | None:intergenic | 40.0% | |
| !! | TGCTGAAGAGGTTCTAAAGT+TGG | + | chr6_2:14700326-14700345 | Msa0910420:CDS | 40.0% |
| !! | AGAGGTTCTAAAGTTGGCAA+AGG | + | chr6_2:14700332-14700351 | Msa0910420:CDS | 40.0% |
| !!! | GTTTTTGTTATTGCCAGCAG+AGG | + | chr6_2:14700367-14700386 | Msa0910420:intron | 40.0% |
| ! | AGTATGTTTTCATGTAGGGG+CGG | - | chr6_2:14700765-14700784 | None:intergenic | 40.0% |
| ACAATATCTACAGGATGGCT+TGG | + | chr6_2:14700888-14700907 | Msa0910420:intron | 40.0% | |
| TTTGAATGTAGTAGCTGAGG+TGG | + | chr6_2:14700939-14700958 | Msa0910420:CDS | 40.0% | |
| GTCGAACGTTGTTCTTATTG+TGG | + | chr6_2:14701180-14701199 | Msa0910420:intron | 40.0% | |
| !!! | GGGCTTTTGGAATTGTATCA+TGG | + | chr6_2:14701354-14701373 | Msa0910420:CDS | 40.0% |
| AACATTCTACCCAAAAAGGG+TGG | - | chr6_2:14701444-14701463 | None:intergenic | 40.0% | |
| AAACCTAGGCTATATAGTCC+TGG | + | chr6_2:14701468-14701487 | Msa0910420:three_prime_UTR | 40.0% | |
| TAACCAGGACTATATAGCCT+AGG | - | chr6_2:14701474-14701493 | None:intergenic | 40.0% | |
| TTGTGGTGCATAGAGCAAGA+GGG | - | chr6_2:14694045-14694064 | None:intergenic | 45.0% | |
| !! | AGAGAGGGTGTTTGAAATGG+AGG | - | chr6_2:14694106-14694125 | None:intergenic | 45.0% |
| ACAACAACAGCTTCAGTTGG+AGG | - | chr6_2:14694201-14694220 | None:intergenic | 45.0% | |
| GCAACAACAACAGCTTCAGT+TGG | - | chr6_2:14694204-14694223 | None:intergenic | 45.0% | |
| ATCTAGAGACCCGTGTATTG+CGG | + | chr6_2:14694309-14694328 | Msa0910420:intron | 45.0% | |
| ! | CAATTGACTCCGCAATACAC+GGG | - | chr6_2:14694321-14694340 | None:intergenic | 45.0% |
| ! | GCAATTGACTCCGCAATACA+CGG | - | chr6_2:14694322-14694341 | None:intergenic | 45.0% |
| ! | ATGCACTGCACGCGTTTTAA+AGG | - | chr6_2:14694597-14694616 | None:intergenic | 45.0% |
| GTATGAGACTGCATGGTTGA+AGG | + | chr6_2:14695148-14695167 | Msa0910420:intron | 45.0% | |
| ACAGTTAAGCGTGCTTGTCT+TGG | + | chr6_2:14695251-14695270 | Msa0910420:intron | 45.0% | |
| !! | TGTTGGTTTGTGGGATCAGT+CGG | + | chr6_2:14695353-14695372 | Msa0910420:intron | 45.0% |
| AACATATCATTGGAGCCAGG+TGG | + | chr6_2:14696090-14696109 | Msa0910420:CDS | 45.0% | |
| ! | CTAAGTTCTAACTGACCACC+TGG | - | chr6_2:14696108-14696127 | None:intergenic | 45.0% |
| GGTGGTCAGTTAGAACTTAG+TGG | + | chr6_2:14696108-14696127 | Msa0910420:CDS | 45.0% | |
| TCTGATGCAGGGTTTCAACA+GGG | - | chr6_2:14696137-14696156 | None:intergenic | 45.0% | |
| ATAGGTTTCCAGCCAAAGTC+TGG | + | chr6_2:14696875-14696894 | Msa0910420:CDS | 45.0% | |
| ! | GCTTAGGCTTTGATCTTCTG+TGG | - | chr6_2:14697117-14697136 | None:intergenic | 45.0% |
| ACGGTTATGACTGTTAGAGG+TGG | - | chr6_2:14697154-14697173 | None:intergenic | 45.0% | |
| !!! | CCGTACAAGCTGGTTTTGTA+AGG | + | chr6_2:14697385-14697404 | Msa0910420:intron | 45.0% |
| !!! | TTTTTTGATCTTCCCCCAGC+AGG | - | chr6_2:14697515-14697534 | None:intergenic | 45.0% |
| TTCAAGCTTGACTCTCCTAC+AGG | + | chr6_2:14697781-14697800 | Msa0910420:intron | 45.0% | |
| ! | AAAACTAGAGGCATGGTCCA+TGG | + | chr6_2:14697846-14697865 | Msa0910420:intron | 45.0% |
| ATGATGAGTGCAGAGTCAAG+AGG | - | chr6_2:14697894-14697913 | None:intergenic | 45.0% | |
| !! | GTTCTGAAGCTGACATGATC+CGG | + | chr6_2:14698396-14698415 | Msa0910420:CDS | 45.0% |
| ACTGTACTGGAATGACCTTC+AGG | + | chr6_2:14699026-14699045 | Msa0910420:CDS | 45.0% | |
| CTGTACTGGAATGACCTTCA+GGG | + | chr6_2:14699027-14699046 | Msa0910420:CDS | 45.0% | |
| AAGATAGATGGGAACCCTGA+AGG | - | chr6_2:14699044-14699063 | None:intergenic | 45.0% | |
| ! | GCTCGGTACTGAATTAAGCA+AGG | - | chr6_2:14699133-14699152 | None:intergenic | 45.0% |
| ! | TTTGCTGTAGGACTTCTTGG+CGG | + | chr6_2:14699177-14699196 | Msa0910420:intron | 45.0% |
| GGAAAGCTACCTTGTATTCC+CGG | + | chr6_2:14699199-14699218 | Msa0910420:CDS | 45.0% | |
| GGTAATTCACCGGGAATACA+AGG | - | chr6_2:14699211-14699230 | None:intergenic | 45.0% | |
| !! | TTACCGGCATTTTGGGTAAG+TGG | + | chr6_2:14699452-14699471 | Msa0910420:intron | 45.0% |
| ! | CCGATCCTTCTTAGTGGATA+AGG | + | chr6_2:14699592-14699611 | Msa0910420:intron | 45.0% |
| ACTGACAACTGGATTCTCTC+TGG | + | chr6_2:14700247-14700266 | Msa0910420:intron | 45.0% | |
| TAGACTCAGACATGGTGGTT+TGG | + | chr6_2:14700390-14700409 | Msa0910420:intron | 45.0% | |
| CATCTAACTACCATTAGGCC+AGG | + | chr6_2:14700653-14700672 | Msa0910420:intron | 45.0% | |
| CAATTATCTGCCTGGCCTAA+TGG | - | chr6_2:14700666-14700685 | None:intergenic | 45.0% | |
| TATAGCCACACTCAGCCATA+CGG | + | chr6_2:14700734-14700753 | Msa0910420:intron | 45.0% | |
| ! | ATGGAAATTCAGGAGAGCAC+TGG | + | chr6_2:14700786-14700805 | Msa0910420:intron | 45.0% |
| !!! | TTTTTTCATATATATTTTTT+GGG | - | chr6_2:14694663-14694682 | None:intergenic | 5.0% |
| !!! | ATTTTTTCATATATATTTTT+TGG | - | chr6_2:14694664-14694683 | None:intergenic | 5.0% |
| !!! | AACAAAAAATTATTTTATTT+TGG | - | chr6_2:14694860-14694879 | None:intergenic | 5.0% |
| !!! | TAAAATAATTTTTTGTTTTA+TGG | + | chr6_2:14694863-14694882 | Msa0910420:intron | 5.0% |
| !!! | AAAATAATTTTTTGTTTTAT+GGG | + | chr6_2:14694864-14694883 | Msa0910420:intron | 5.0% |
| !! | ATATAATCAATAAAAAAAAA+AGG | - | chr6_2:14695425-14695444 | None:intergenic | 5.0% |
| !!! | TATTTTTTTTAATCTATATA+TGG | + | chr6_2:14698065-14698084 | Msa0910420:intron | 5.0% |
| !! | AAAAAATCATATAAATAAAA+TGG | - | chr6_2:14700593-14700612 | None:intergenic | 5.0% |
| TGTGGTGCATAGAGCAAGAG+GGG | - | chr6_2:14694044-14694063 | None:intergenic | 50.0% | |
| GTTGTGGTGCATAGAGCAAG+AGG | - | chr6_2:14694046-14694065 | None:intergenic | 50.0% | |
| ! | TGGAGGTTTTCTGCTGCAGA+AGG | - | chr6_2:14694089-14694108 | None:intergenic | 50.0% |
| CGGCAACAATCACTACCCTA+CGG | - | chr6_2:14694173-14694192 | None:intergenic | 50.0% | |
| AGCTTCAGTTGGAGGACTAG+CGG | - | chr6_2:14694193-14694212 | None:intergenic | 50.0% | |
| TTTGTAACGTCTCCGCTTCG+TGG | + | chr6_2:14695019-14695038 | Msa0910420:intron | 50.0% | |
| TTGTAACGTCTCCGCTTCGT+GGG | + | chr6_2:14695020-14695039 | Msa0910420:intron | 50.0% | |
| TATGGCACTCGAGGCTAATG+AGG | + | chr6_2:14695045-14695064 | Msa0910420:intron | 50.0% | |
| ATGGCACTCGAGGCTAATGA+GGG | + | chr6_2:14695046-14695065 | Msa0910420:intron | 50.0% | |
| AATGGATCCTGAAGTCGTGC+AGG | + | chr6_2:14695126-14695145 | Msa0910420:intron | 50.0% | |
| TCTCATACCTGCACGACTTC+AGG | - | chr6_2:14695136-14695155 | None:intergenic | 50.0% | |
| CACGCTGAAAAGACTCGTGT+TGG | + | chr6_2:14695336-14695355 | Msa0910420:intron | 50.0% | |
| CTGATGCAGGGTTTCAACAG+GGG | - | chr6_2:14696136-14696155 | None:intergenic | 50.0% | |
| GTCTGATGCAGGGTTTCAAC+AGG | - | chr6_2:14696138-14696157 | None:intergenic | 50.0% | |
| TGCCACAATTCAAGGAGGTG+TGG | + | chr6_2:14696303-14696322 | Msa0910420:intron | 50.0% | |
| AGCCACACCTCCTTGAATTG+TGG | - | chr6_2:14696308-14696327 | None:intergenic | 50.0% | |
| CTTTGAGTCCAGACTTTGGC+TGG | - | chr6_2:14696886-14696905 | None:intergenic | 50.0% | |
| GCGACGGTTATGACTGTTAG+AGG | - | chr6_2:14697157-14697176 | None:intergenic | 50.0% | |
| GTTCTCAACAAGCTGGTGCT+TGG | + | chr6_2:14697280-14697299 | Msa0910420:intron | 50.0% | |
| ACCATGCCTAGCTTGGATAG+TGG | + | chr6_2:14697312-14697331 | Msa0910420:intron | 50.0% | |
| ACCACTATCCAAGCTAGGCA+TGG | - | chr6_2:14697316-14697335 | None:intergenic | 50.0% | |
| CTTGCACCACTATCCAAGCT+AGG | - | chr6_2:14697321-14697340 | None:intergenic | 50.0% | |
| !! | TGAGGAGCGCCTCTTCTATA+TGG | - | chr6_2:14697365-14697384 | None:intergenic | 50.0% |
| CAAAACCAGCTTGTACGGTG+AGG | - | chr6_2:14697383-14697402 | None:intergenic | 50.0% | |
| GTGGTTCAGCAGAAGATGTG+TGG | - | chr6_2:14697436-14697455 | None:intergenic | 50.0% | |
| TGACTCTCCTACAGGTCGTA+TGG | + | chr6_2:14697789-14697808 | Msa0910420:intron | 50.0% | |
| CTCCTACAGGTCGTATGGTT+AGG | + | chr6_2:14697794-14697813 | Msa0910420:intron | 50.0% | |
| TGCCTAACCATACGACCTGT+AGG | - | chr6_2:14697799-14697818 | None:intergenic | 50.0% | |
| TCATCTCACAAGGCCATCCA+TGG | - | chr6_2:14697866-14697885 | None:intergenic | 50.0% | |
| ! | AGGTGATCGTGTTGGCATCA+CGG | - | chr6_2:14698005-14698024 | None:intergenic | 50.0% |
| ! | ATGCCCAAAGTTGGTTCTCG+TGG | + | chr6_2:14698201-14698220 | Msa0910420:CDS | 50.0% |
| ! | TGCCCAAAGTTGGTTCTCGT+GGG | + | chr6_2:14698202-14698221 | Msa0910420:CDS | 50.0% |
| AGCCCACGAGAACCAACTTT+GGG | - | chr6_2:14698207-14698226 | None:intergenic | 50.0% | |
| AAGCCCACGAGAACCAACTT+TGG | - | chr6_2:14698208-14698227 | None:intergenic | 50.0% | |
| CAAGGCTAGCACGAAACTTC+CGG | - | chr6_2:14698418-14698437 | None:intergenic | 50.0% | |
| ! | TTCTTACGGGCTGCAATGCA+AGG | - | chr6_2:14698436-14698455 | None:intergenic | 50.0% |
| ! | GATGTTGATAAGGACCGCAC+AGG | + | chr6_2:14698702-14698721 | Msa0910420:CDS | 50.0% |
| TTGCTGTAGGACTTCTTGGC+GGG | + | chr6_2:14699178-14699197 | Msa0910420:intron | 50.0% | |
| !! | TTGGAGATGAGAGGTGCTGA+CGG | + | chr6_2:14699404-14699423 | Msa0910420:CDS | 50.0% |
| GTTGCGCCACTAATCCTTTC+TGG | + | chr6_2:14699934-14699953 | Msa0910420:intron | 50.0% | |
| TAGCAATGCAGTGCGCACTT+AGG | - | chr6_2:14699998-14700017 | None:intergenic | 50.0% | |
| GGTCAACAACCTCTAGTGCT+AGG | + | chr6_2:14700046-14700065 | Msa0910420:intron | 50.0% | |
| ACAACTGGATTCTCTCTGGC+AGG | + | chr6_2:14700251-14700270 | Msa0910420:intron | 50.0% | |
| GCTGAAGCATGTTGCTGAAG+AGG | + | chr6_2:14700314-14700333 | Msa0910420:CDS | 50.0% | |
| ATGTCTGAGTCTACCTCTGC+TGG | - | chr6_2:14700383-14700402 | None:intergenic | 50.0% | |
| AGCAGAGGTAGACTCAGACA+TGG | + | chr6_2:14700382-14700401 | Msa0910420:intron | 50.0% | |
| AGAGGTAGACTCAGACATGG+TGG | + | chr6_2:14700385-14700404 | Msa0910420:intron | 50.0% | |
| !! | TCAGACATGGTGGTTTGGTG+TGG | + | chr6_2:14700395-14700414 | Msa0910420:intron | 50.0% |
| TAGCGGTAAGAGTTGAACCG+AGG | + | chr6_2:14700613-14700632 | Msa0910420:intron | 50.0% | |
| ! | CAGGATGGCTTGGAAAGAAG+AGG | + | chr6_2:14700898-14700917 | Msa0910420:intron | 50.0% |
| GAGGTGGCAAGAACAGGTAA+TGG | + | chr6_2:14700955-14700974 | Msa0910420:intron | 50.0% | |
| AATTCCAAAAGCCCCTCAGC+TGG | - | chr6_2:14701348-14701367 | None:intergenic | 50.0% | |
| GTGGTGCATAGAGCAAGAGG+GGG | - | chr6_2:14694043-14694062 | None:intergenic | 55.0% | |
| AGTGCCATATGCCCACGAAG+CGG | - | chr6_2:14695034-14695053 | None:intergenic | 55.0% | |
| CACTCGAGGCTAATGAGGGT+GGG | + | chr6_2:14695050-14695069 | Msa0910420:intron | 55.0% | |
| ACTCGAGGCTAATGAGGGTG+GGG | + | chr6_2:14695051-14695070 | Msa0910420:intron | 55.0% | |
| CGTGCAGGTATGAGACTGCA+TGG | + | chr6_2:14695141-14695160 | Msa0910420:intron | 55.0% | |
| ! | TCCTCACTCGCACGCTTTTC+GGG | - | chr6_2:14695311-14695330 | None:intergenic | 55.0% |
| ! | CTCCTCACTCGCACGCTTTT+CGG | - | chr6_2:14695312-14695331 | None:intergenic | 55.0% |
| ! | CTAGAGGCATGGTCCATGGA+TGG | + | chr6_2:14697850-14697869 | Msa0910420:intron | 55.0% |
| GTCCAGGACATGCACTGTAC+AGG | + | chr6_2:14698236-14698255 | Msa0910420:CDS | 55.0% | |
| CACCTGTACAGTGCATGTCC+TGG | - | chr6_2:14698241-14698260 | None:intergenic | 55.0% | |
| CAAAAGGCAGCATGCCTGTG+CGG | - | chr6_2:14698719-14698738 | None:intergenic | 55.0% | |
| AAGGGTTGTGTCGTCTGCTG+CGG | + | chr6_2:14698852-14698871 | Msa0910420:intron | 55.0% | |
| !! | AGATGAGAGGTGCTGACGGA+GGG | + | chr6_2:14699408-14699427 | Msa0910420:CDS | 55.0% |
| CCGCCACTTACCCAAAATGC+CGG | - | chr6_2:14699458-14699477 | None:intergenic | 55.0% | |
| !! | CCGGCATTTTGGGTAAGTGG+CGG | + | chr6_2:14699455-14699474 | Msa0910420:intron | 55.0% |
| CTCTGGCAGGCTACCAAAAC+TGG | + | chr6_2:14700264-14700283 | Msa0910420:intron | 55.0% | |
| ACCTACCGTATGGCTGAGTG+TGG | - | chr6_2:14700742-14700761 | None:intergenic | 55.0% | |
| GTAGCTGAGGTGGCAAGAAC+AGG | + | chr6_2:14700949-14700968 | Msa0910420:CDS | 55.0% | |
| !! | GTAGGTGTCACTCCAGCTGA+GGG | + | chr6_2:14701333-14701352 | Msa0910420:intron | 55.0% |
| !! | TAGGTGTCACTCCAGCTGAG+GGG | + | chr6_2:14701334-14701353 | Msa0910420:intron | 55.0% |
| GTCTCCGCTTCGTGGGCATA+TGG | + | chr6_2:14695027-14695046 | Msa0910420:intron | 60.0% | |
| TCGTGGGCATATGGCACTCG+AGG | + | chr6_2:14695036-14695055 | Msa0910420:intron | 60.0% | |
| GCACTCGAGGCTAATGAGGG+TGG | + | chr6_2:14695049-14695068 | Msa0910420:intron | 60.0% | |
| AGGCTAATGAGGGTGGGGAG+TGG | + | chr6_2:14695056-14695075 | Msa0910420:intron | 60.0% | |
| AATGAGGGTGGGGAGTGGTC+CGG | + | chr6_2:14695061-14695080 | Msa0910420:intron | 60.0% | |
| TCCGGCTTCTGGCAGCTTCT+AGG | + | chr6_2:14695079-14695098 | Msa0910420:intron | 60.0% | |
| GCCTAGAAGCTGCCAGAAGC+CGG | - | chr6_2:14695083-14695102 | None:intergenic | 60.0% | |
| ! | TCCCGAAAAGCGTGCGAGTG+AGG | + | chr6_2:14695307-14695326 | Msa0910420:intron | 60.0% |
| ! | GAGTGGTGGGAGAGTCAGAG+TGG | - | chr6_2:14697960-14697979 | None:intergenic | 60.0% |
| GTGGGCTTGACGTGATGTCC+AGG | + | chr6_2:14698220-14698239 | Msa0910420:CDS | 60.0% | |
| !! | GAGATGAGAGGTGCTGACGG+AGG | + | chr6_2:14699407-14699426 | Msa0910420:CDS | 60.0% |
| GCCACACTCAGCCATACGGT+AGG | + | chr6_2:14700738-14700757 | Msa0910420:intron | 60.0% | |
| !! | GGTAGGTGTCACTCCAGCTG+AGG | + | chr6_2:14701332-14701351 | Msa0910420:intron | 60.0% |
| ! | CACTCCAGCTGAGGGGCTTT+TGG | + | chr6_2:14701341-14701360 | Msa0910420:CDS | 60.0% |
| GCGCTCCTCACCGTACAAGC+TGG | + | chr6_2:14697375-14697394 | Msa0910420:intron | 65.0% | |
| GTAGGGGCGGACCTACCGTA+TGG | - | chr6_2:14700752-14700771 | None:intergenic | 65.0% | |
| GTGGGGAGTGGTCCGGCTTC+TGG | + | chr6_2:14695068-14695087 | Msa0910420:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_2 | gene | 14694015 | 14701586 | 14694015 | ID=Msa0910420;Name=Msa0910420 |
| chr6_2 | mRNA | 14694015 | 14701586 | 14694015 | ID=Msa0910420-mRNA-1;Parent=Msa0910420;Name=Msa0910420-mRNA-1;_AED=0.15;_eAED=0.15;_QI=0|0.92|0.86|1|1|1|15|161|507 |
| chr6_2 | exon | 14694015 | 14694295 | 14694015 | ID=Msa0910420-mRNA-1:exon:3238;Parent=Msa0910420-mRNA-1 |
| chr6_2 | exon | 14695788 | 14695938 | 14695788 | ID=Msa0910420-mRNA-1:exon:3239;Parent=Msa0910420-mRNA-1 |
| chr6_2 | exon | 14696081 | 14696188 | 14696081 | ID=Msa0910420-mRNA-1:exon:3240;Parent=Msa0910420-mRNA-1 |
| chr6_2 | exon | 14696833 | 14696925 | 14696833 | ID=Msa0910420-mRNA-1:exon:3241;Parent=Msa0910420-mRNA-1 |
| chr6_2 | exon | 14698174 | 14698257 | 14698174 | ID=Msa0910420-mRNA-1:exon:3242;Parent=Msa0910420-mRNA-1 |
| chr6_2 | exon | 14698380 | 14698448 | 14698380 | ID=Msa0910420-mRNA-1:exon:3243;Parent=Msa0910420-mRNA-1 |
| chr6_2 | exon | 14698533 | 14698603 | 14698533 | ID=Msa0910420-mRNA-1:exon:3244;Parent=Msa0910420-mRNA-1 |
| chr6_2 | exon | 14698689 | 14698757 | 14698689 | ID=Msa0910420-mRNA-1:exon:3245;Parent=Msa0910420-mRNA-1 |
| chr6_2 | exon | 14698955 | 14699048 | 14698955 | ID=Msa0910420-mRNA-1:exon:3246;Parent=Msa0910420-mRNA-1 |
| chr6_2 | exon | 14699187 | 14699276 | 14699187 | ID=Msa0910420-mRNA-1:exon:3247;Parent=Msa0910420-mRNA-1 |
| chr6_2 | exon | 14699386 | 14699466 | 14699386 | ID=Msa0910420-mRNA-1:exon:3248;Parent=Msa0910420-mRNA-1 |
| chr6_2 | exon | 14699720 | 14699812 | 14699720 | ID=Msa0910420-mRNA-1:exon:3249;Parent=Msa0910420-mRNA-1 |
| chr6_2 | exon | 14700273 | 14700353 | 14700273 | ID=Msa0910420-mRNA-1:exon:3250;Parent=Msa0910420-mRNA-1 |
| chr6_2 | exon | 14700901 | 14700970 | 14700901 | ID=Msa0910420-mRNA-1:exon:3251;Parent=Msa0910420-mRNA-1 |
| chr6_2 | exon | 14701337 | 14701586 | 14701337 | ID=Msa0910420-mRNA-1:exon:3252;Parent=Msa0910420-mRNA-1 |
| chr6_2 | CDS | 14694015 | 14694295 | 14694015 | ID=Msa0910420-mRNA-1:cds;Parent=Msa0910420-mRNA-1 |
| chr6_2 | CDS | 14695788 | 14695938 | 14695788 | ID=Msa0910420-mRNA-1:cds;Parent=Msa0910420-mRNA-1 |
| chr6_2 | CDS | 14696081 | 14696188 | 14696081 | ID=Msa0910420-mRNA-1:cds;Parent=Msa0910420-mRNA-1 |
| chr6_2 | CDS | 14696833 | 14696925 | 14696833 | ID=Msa0910420-mRNA-1:cds;Parent=Msa0910420-mRNA-1 |
| chr6_2 | CDS | 14698174 | 14698257 | 14698174 | ID=Msa0910420-mRNA-1:cds;Parent=Msa0910420-mRNA-1 |
| chr6_2 | CDS | 14698380 | 14698448 | 14698380 | ID=Msa0910420-mRNA-1:cds;Parent=Msa0910420-mRNA-1 |
| chr6_2 | CDS | 14698533 | 14698603 | 14698533 | ID=Msa0910420-mRNA-1:cds;Parent=Msa0910420-mRNA-1 |
| chr6_2 | CDS | 14698689 | 14698757 | 14698689 | ID=Msa0910420-mRNA-1:cds;Parent=Msa0910420-mRNA-1 |
| chr6_2 | CDS | 14698955 | 14699048 | 14698955 | ID=Msa0910420-mRNA-1:cds;Parent=Msa0910420-mRNA-1 |
| chr6_2 | CDS | 14699187 | 14699276 | 14699187 | ID=Msa0910420-mRNA-1:cds;Parent=Msa0910420-mRNA-1 |
| chr6_2 | CDS | 14699386 | 14699466 | 14699386 | ID=Msa0910420-mRNA-1:cds;Parent=Msa0910420-mRNA-1 |
| chr6_2 | CDS | 14699720 | 14699812 | 14699720 | ID=Msa0910420-mRNA-1:cds;Parent=Msa0910420-mRNA-1 |
| chr6_2 | CDS | 14700273 | 14700353 | 14700273 | ID=Msa0910420-mRNA-1:cds;Parent=Msa0910420-mRNA-1 |
| chr6_2 | CDS | 14700901 | 14700970 | 14700901 | ID=Msa0910420-mRNA-1:cds;Parent=Msa0910420-mRNA-1 |
| chr6_2 | CDS | 14701337 | 14701425 | 14701337 | ID=Msa0910420-mRNA-1:cds;Parent=Msa0910420-mRNA-1 |
| chr6_2 | three_prime_UTR | 14701426 | 14701586 | 14701426 | ID=Msa0910420-mRNA-1:three_prime_utr;Parent=Msa0910420-mRNA-1 |
| Gene Sequence |
| Protein sequence |
