Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0912700 | XP_039690896.1 | 94.586 | 314 | 16 | 1 | 1 | 313 | 1 | 314 | 0.0 | 568 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0912700 | sp|Q84V25|ENOXE_FRAAN | 72.368 | 304 | 84 | 0 | 10 | 313 | 5 | 308 | 3.03e-149 | 425 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0885540 | Msa0912700 | 0.807846 | 4.140973e-50 | -8.615850e-47 |
| Msa0912700 | Msa0987020 | 0.802485 | 5.485285e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0912700 | MtrunA17_Chr6g0465501 | 94.586 | 314 | 16 | 1 | 1 | 313 | 1 | 314 | 0.0 | 568 |
| Msa0912700 | MtrunA17_Chr6g0466321 | 94.586 | 314 | 16 | 1 | 1 | 313 | 1 | 314 | 0.0 | 568 |
| Msa0912700 | MtrunA17_Chr7g0228011 | 72.148 | 298 | 83 | 0 | 16 | 313 | 6 | 303 | 8.94e-138 | 393 |
| Msa0912700 | MtrunA17_Chr6g0453201 | 67.881 | 302 | 97 | 0 | 11 | 312 | 4 | 305 | 1.19e-134 | 385 |
| Msa0912700 | MtrunA17_Chr8g0365421 | 61.146 | 314 | 120 | 2 | 1 | 313 | 58 | 370 | 1.36e-134 | 388 |
| Msa0912700 | MtrunA17_Chr6g0453191 | 67.010 | 291 | 96 | 0 | 11 | 301 | 4 | 294 | 1.36e-128 | 370 |
| Msa0912700 | MtrunA17_Chr8g0351481 | 43.887 | 319 | 171 | 6 | 19 | 334 | 5 | 318 | 5.42e-76 | 237 |
| Msa0912700 | MtrunA17_Chr8g0351271 | 45.638 | 298 | 154 | 6 | 19 | 313 | 5 | 297 | 1.32e-75 | 236 |
| Msa0912700 | MtrunA17_Chr6g0465551 | 90.123 | 81 | 7 | 1 | 1 | 80 | 1 | 81 | 6.22e-46 | 150 |
| Msa0912700 | MtrunA17_Chr4g0015051 | 31.629 | 313 | 171 | 9 | 19 | 300 | 7 | 307 | 3.69e-29 | 114 |
| Msa0912700 | MtrunA17_Chr4g0014691 | 31.633 | 294 | 162 | 7 | 36 | 300 | 23 | 306 | 6.80e-29 | 114 |
| Msa0912700 | MtrunA17_Chr4g0014541 | 31.633 | 294 | 162 | 7 | 36 | 300 | 23 | 306 | 7.01e-29 | 114 |
| Msa0912700 | MtrunA17_Chr4g0014951 | 31.715 | 309 | 168 | 10 | 23 | 300 | 11 | 307 | 5.56e-28 | 111 |
| Msa0912700 | MtrunA17_Chr2g0316731 | 34.677 | 248 | 146 | 8 | 18 | 258 | 26 | 264 | 1.95e-27 | 110 |
| Msa0912700 | MtrunA17_Chr7g0235021 | 31.715 | 309 | 175 | 10 | 19 | 300 | 7 | 306 | 6.86e-27 | 108 |
| Msa0912700 | MtrunA17_Chr4g0015091 | 30.945 | 307 | 172 | 9 | 23 | 300 | 11 | 306 | 6.93e-27 | 108 |
| Msa0912700 | MtrunA17_Chr4g0014971 | 31.290 | 310 | 176 | 9 | 19 | 300 | 7 | 307 | 3.09e-26 | 106 |
| Msa0912700 | MtrunA17_Chr4g0014931 | 30.476 | 315 | 172 | 10 | 19 | 300 | 7 | 307 | 1.93e-23 | 99.0 |
| Msa0912700 | MtrunA17_Chr2g0281301 | 31.034 | 232 | 140 | 8 | 16 | 240 | 12 | 230 | 9.73e-22 | 94.4 |
| Msa0912700 | MtrunA17_Chr4g0045041 | 27.331 | 311 | 173 | 9 | 43 | 313 | 313 | 610 | 5.23e-20 | 90.9 |
| Msa0912700 | MtrunA17_Chr4g0045061 | 26.688 | 311 | 175 | 9 | 43 | 313 | 313 | 610 | 7.98e-19 | 87.4 |
| Msa0912700 | MtrunA17_Chr2g0281281 | 30.952 | 210 | 119 | 7 | 42 | 240 | 23 | 217 | 2.11e-18 | 84.7 |
| Msa0912700 | MtrunA17_Chr3g0128511 | 31.179 | 263 | 145 | 9 | 9 | 258 | 11 | 250 | 6.39e-18 | 83.6 |
| Msa0912700 | MtrunA17_Chr4g0015001 | 29.612 | 206 | 117 | 5 | 121 | 300 | 5 | 208 | 6.30e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0912700 | AT1G23740.1 | 61.462 | 301 | 115 | 1 | 13 | 313 | 73 | 372 | 1.31e-127 | 370 |
| Msa0912700 | AT3G15090.1 | 33.597 | 253 | 152 | 9 | 13 | 258 | 27 | 270 | 1.60e-25 | 105 |
| Msa0912700 | AT4G13010.1 | 30.272 | 294 | 166 | 7 | 36 | 300 | 23 | 306 | 4.87e-25 | 103 |
| Msa0912700 | AT3G56460.1 | 34.221 | 263 | 138 | 9 | 9 | 258 | 11 | 251 | 1.11e-24 | 102 |
| Msa0912700 | AT4G21580.1 | 30.603 | 232 | 135 | 9 | 19 | 240 | 2 | 217 | 1.05e-20 | 91.7 |
| Msa0912700 | AT4G21580.3 | 30.172 | 232 | 130 | 10 | 19 | 240 | 2 | 211 | 6.48e-19 | 86.3 |
| Msa0912700 | AT1G49670.1 | 27.451 | 306 | 173 | 10 | 43 | 312 | 313 | 605 | 5.95e-18 | 85.1 |
| Msa0912700 | AT3G45770.1 | 29.961 | 257 | 148 | 10 | 18 | 257 | 45 | 286 | 2.50e-14 | 73.6 |
| Msa0912700 | AT4G21580.2 | 28.000 | 175 | 105 | 6 | 73 | 240 | 24 | 184 | 9.99e-12 | 65.1 |
Find 79 sgRNAs with CRISPR-Local
Find 316 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGTTGGAAGCTTTGCTATTC+AGG | 0.194050 | 6_2:+22165998 | Msa0912700:CDS |
| CAGCTTGCCAAACATGTTTA+TGG | 0.207808 | 6_2:+22168007 | Msa0912700:intron |
| TCTTGTAATCTACCGGATTA+AGG | 0.225202 | 6_2:-22164601 | None:intergenic |
| TTCAAGAGCTACTGGAAAAT+TGG | 0.285794 | 6_2:+22168893 | Msa0912700:CDS |
| GATCATTGGTTTCATGTAAT+GGG | 0.290307 | 6_2:-22168924 | None:intergenic |
| ACAAAGTGCCAAGAATCTTT+AGG | 0.297216 | 6_2:-22165809 | None:intergenic |
| CTTTCAAACCTAAAGATTCT+TGG | 0.317314 | 6_2:+22165801 | Msa0912700:CDS |
| TTCTAAAGTTACATCCAAAT+TGG | 0.322662 | 6_2:+22164525 | Msa0912700:CDS |
| TAGGGCTATGAAGGCAATTA+AGG | 0.325646 | 6_2:+22168678 | Msa0912700:CDS |
| GCTTCAACGACGTCTGAAAA+TGG | 0.328542 | 6_2:-22168850 | None:intergenic |
| AAGTGAAGTGGTGAAATTTA+AGG | 0.335007 | 6_2:+22165740 | Msa0912700:CDS |
| AGTGGAGGTATGGACCAATT+TGG | 0.348819 | 6_2:-22164539 | None:intergenic |
| AATAGCTGAAGAGAGATTAT+TGG | 0.353560 | 6_2:+22165842 | Msa0912700:CDS |
| GTACCAGGCTTTGATGTTGC+TGG | 0.358510 | 6_2:+22165699 | Msa0912700:CDS |
| AGATCATTGGTTTCATGTAA+TGG | 0.359036 | 6_2:-22168925 | None:intergenic |
| GTGATGTAGGGGAAGTTGAT+AGG | 0.368988 | 6_2:+22168659 | Msa0912700:intron |
| TTCTTTGTGCTCACTTCTAA+AGG | 0.381735 | 6_2:+22168751 | Msa0912700:CDS |
| ATCCTTGTCTTGGGAGGTGC+TGG | 0.386559 | 6_2:+22165972 | Msa0912700:CDS |
| TTGGGAGGTGCTGGTGGAGT+TGG | 0.387165 | 6_2:+22165981 | Msa0912700:CDS |
| GAAAATGGTATAGGAGTCTT+GGG | 0.397714 | 6_2:-22168835 | None:intergenic |
| AATTGACCACTTTCAAAGTA+AGG | 0.400640 | 6_2:-22168796 | None:intergenic |
| CTTGTAATCTACCGGATTAA+GGG | 0.409918 | 6_2:-22164600 | None:intergenic |
| GTCATCTTTGAGTGGAGGTA+TGG | 0.413772 | 6_2:-22164549 | None:intergenic |
| AGATGCACCATAAACATGTT+TGG | 0.415334 | 6_2:-22168014 | None:intergenic |
| AAGGTTGGAGATGAAATATA+TGG | 0.416415 | 6_2:+22165759 | Msa0912700:CDS |
| TGGCAAATCTATCCTTGTCT+TGG | 0.426090 | 6_2:+22165962 | Msa0912700:CDS |
| TTCTCCTTTGTATAATCGAT+TGG | 0.434467 | 6_2:-22168100 | None:intergenic |
| TGTAACTTTAGAATATCTAA+TGG | 0.437701 | 6_2:-22164515 | None:intergenic |
| GGCAAATCTATCCTTGTCTT+GGG | 0.446782 | 6_2:+22165963 | Msa0912700:CDS |
| GGAGTCTTGGGGTCAAGTCT+TGG | 0.450924 | 6_2:-22168823 | None:intergenic |
| ACGACGTCTGAAAATGGTAT+AGG | 0.451761 | 6_2:-22168844 | None:intergenic |
| TGAAAATGGTATAGGAGTCT+TGG | 0.460489 | 6_2:-22168836 | None:intergenic |
| TGATGTAGGGGAAGTTGATA+GGG | 0.461956 | 6_2:+22168660 | Msa0912700:intron |
| TTAAAACCTTACTTTGAAAG+TGG | 0.467816 | 6_2:+22168790 | Msa0912700:CDS |
| TGTTGCTGCTTCCCTTAATC+CGG | 0.474496 | 6_2:+22164589 | Msa0912700:CDS |
| AAAATAGCCGGTGGACATCC+AGG | 0.476139 | 6_2:-22168730 | None:intergenic |
| GAGGATGCATGCCTTGTTCA+AGG | 0.477132 | 6_2:+22164622 | Msa0912700:CDS |
| AGAGAGACTTCAAGAGCTAC+TGG | 0.478786 | 6_2:+22168885 | Msa0912700:CDS |
| TGAGTTGGAATAGTAATAGT+TGG | 0.480302 | 6_2:-22164458 | None:intergenic |
| TGCATCCTCTTGTAATCTAC+CGG | 0.495593 | 6_2:-22164608 | None:intergenic |
| TTCCAACTCATACAAAAGCT+TGG | 0.500152 | 6_2:+22164471 | Msa0912700:CDS |
| GAGAGAGCTGAGCTTTCTGC+TGG | 0.500936 | 6_2:+22165942 | Msa0912700:CDS |
| CAACAACCTTGATGAGGACT+TGG | 0.502267 | 6_2:-22164571 | None:intergenic |
| GGAAGTTGATAGGGCTATGA+AGG | 0.506979 | 6_2:+22168669 | Msa0912700:CDS |
| CTTGTCTTGGGAGGTGCTGG+TGG | 0.513724 | 6_2:+22165975 | Msa0912700:CDS |
| TGCTAGCATTCCTTTAGCTA+TGG | 0.523185 | 6_2:+22165899 | Msa0912700:CDS |
| TAAGCTGTCTCCATAGCTAA+AGG | 0.523414 | 6_2:-22165909 | None:intergenic |
| GCTATGGAGACAGCTTATGA+AGG | 0.536850 | 6_2:+22165915 | Msa0912700:CDS |
| ATAGCAGCAACTTCAAGCAC+TGG | 0.540422 | 6_2:+22168040 | Msa0912700:CDS |
| AAGTTTGATGTAGTGTATGA+TGG | 0.540914 | 6_2:+22168142 | Msa0912700:CDS |
| GAAGTGGTGAAATTTAAGGT+TGG | 0.542994 | 6_2:+22165744 | Msa0912700:CDS |
| GTTGTGACAATAGTACCTCC+TGG | 0.547377 | 6_2:+22168712 | Msa0912700:CDS |
| AGGATCAGTGTCCTTGAACA+AGG | 0.563159 | 6_2:-22164633 | None:intergenic |
| TGCTGGCATAGTAATTAAAG+TGG | 0.567681 | 6_2:+22165716 | Msa0912700:CDS |
| CTCTTGAAGTCTCTCTAAGT+AGG | 0.569325 | 6_2:-22168878 | None:intergenic |
| GTGAGCACAAAGAAAATAGC+CGG | 0.573204 | 6_2:-22168742 | None:intergenic |
| AAATCTATCCTTGTCTTGGG+AGG | 0.587774 | 6_2:+22165966 | Msa0912700:CDS |
| GATGTAGTGTATGATGGAGT+AGG | 0.591662 | 6_2:+22168148 | Msa0912700:CDS |
| CACCAGCACCTCCCAAGACA+AGG | 0.592723 | 6_2:-22165974 | None:intergenic |
| GCTTGGTTCTACTCTGAACA+TGG | 0.593786 | 6_2:+22164488 | Msa0912700:CDS |
| TTGTGTGAGAAGATTGTACC+AGG | 0.597513 | 6_2:+22165684 | Msa0912700:intron |
| ATGCCAGCAACATCAAAGCC+TGG | 0.598693 | 6_2:-22165702 | None:intergenic |
| AATTAAAGTGGGAAGTGAAG+TGG | 0.601756 | 6_2:+22165728 | Msa0912700:CDS |
| AGTACCTCCTGGATGTCCAC+CGG | 0.607633 | 6_2:+22168723 | Msa0912700:CDS |
| AGGACTTGGTCATCTTTGAG+TGG | 0.609008 | 6_2:-22164557 | None:intergenic |
| TATGGTGACATCAATGAGGA+AGG | 0.611730 | 6_2:+22165777 | Msa0912700:CDS |
| AATTAACATACAGGTAGATG+AGG | 0.613228 | 6_2:-22164653 | None:intergenic |
| ACTTGGTCATCTTTGAGTGG+AGG | 0.616451 | 6_2:-22164554 | None:intergenic |
| CTTGCCAATCGATTATACAA+AGG | 0.618334 | 6_2:+22168096 | Msa0912700:CDS |
| AGATGACCAAGTCCTCATCA+AGG | 0.619767 | 6_2:+22164565 | Msa0912700:CDS |
| GCTGGCATAGTAATTAAAGT+GGG | 0.631964 | 6_2:+22165717 | Msa0912700:CDS |
| TTAATCCGGTAGATTACAAG+AGG | 0.638046 | 6_2:+22164603 | Msa0912700:CDS |
| ATGAAGGCAATTAAGGAAGG+TGG | 0.640781 | 6_2:+22168685 | Msa0912700:CDS |
| GCTATGAAGGCAATTAAGGA+AGG | 0.645710 | 6_2:+22168682 | Msa0912700:CDS |
| AAGCAGCAACAACCTTGATG+AGG | 0.675221 | 6_2:-22164577 | None:intergenic |
| AGCACAAAGAAAATAGCCGG+TGG | 0.680600 | 6_2:-22168739 | None:intergenic |
| AATATATGGTGACATCAATG+AGG | 0.688125 | 6_2:+22165773 | Msa0912700:CDS |
| AAAATGGTATAGGAGTCTTG+GGG | 0.746854 | 6_2:-22168834 | None:intergenic |
| ATAGCCGGTGGACATCCAGG+AGG | 0.794463 | 6_2:-22168727 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAATAAAAAAATTAAAA+GGG | - | chr6_2:22167231-22167250 | None:intergenic | 0.0% |
| !! | AAATAAATAAAAAAATTAAA+AGG | - | chr6_2:22167232-22167251 | None:intergenic | 0.0% |
| !! | TACATATTATATATAGAAAA+AGG | + | chr6_2:22165050-22165069 | Msa0912700:intron | 10.0% |
| !! | ACATATTATATATAGAAAAA+GGG | + | chr6_2:22165051-22165070 | Msa0912700:intron | 10.0% |
| !!! | ACTTTTTTTTTTTTATGAAT+CGG | - | chr6_2:22165391-22165410 | None:intergenic | 10.0% |
| !!! | AGTGTTATTTTTATATATAA+TGG | - | chr6_2:22165585-22165604 | None:intergenic | 10.0% |
| !! | AAATACAAAAATATTAAAGT+GGG | - | chr6_2:22166290-22166309 | None:intergenic | 10.0% |
| !! | AAAATACAAAAATATTAAAG+TGG | - | chr6_2:22166291-22166310 | None:intergenic | 10.0% |
| !!! | ATTAAACCTATATTTTATTA+CGG | + | chr6_2:22166630-22166649 | Msa0912700:intron | 10.0% |
| !!! | ACTTTTTATAAATTGTGTTT+AGG | - | chr6_2:22164837-22164856 | None:intergenic | 15.0% |
| !! | CATATTATATATAGAAAAAG+GGG | + | chr6_2:22165052-22165071 | Msa0912700:intron | 15.0% |
| !! | AAATTAATACAAAAATTGTG+AGG | + | chr6_2:22165269-22165288 | Msa0912700:intron | 15.0% |
| !! | TTTATAAAAATTGAACATCA+AGG | + | chr6_2:22165493-22165512 | Msa0912700:intron | 15.0% |
| !!! | TTTATATATAATGGTTCTAA+AGG | - | chr6_2:22165576-22165595 | None:intergenic | 15.0% |
| !!! | ATGAATGATTTTTAAGAAAA+TGG | - | chr6_2:22165641-22165660 | None:intergenic | 15.0% |
| !!! | TTTTTGTTTATATTTCATTC+TGG | - | chr6_2:22166068-22166087 | None:intergenic | 15.0% |
| !! | CTAAAATATAAGAAAACTTA+GGG | - | chr6_2:22166117-22166136 | None:intergenic | 15.0% |
| !!! | AAAGAGTTATTTTTTTTAGA+GGG | - | chr6_2:22166189-22166208 | None:intergenic | 15.0% |
| !! | TAAAAAAAATAACTCTTTCT+AGG | + | chr6_2:22166191-22166210 | Msa0912700:intron | 15.0% |
| !!! | ATATTTCTAAAAGTTAGTTA+CGG | - | chr6_2:22166848-22166867 | None:intergenic | 15.0% |
| !!! | AAAATTGACTTTTTGTAAAA+GGG | - | chr6_2:22167122-22167141 | None:intergenic | 15.0% |
| !! | ATATTACATAGACTAAAATA+GGG | - | chr6_2:22167380-22167399 | None:intergenic | 15.0% |
| !! | AATATTACATAGACTAAAAT+AGG | - | chr6_2:22167381-22167400 | None:intergenic | 15.0% |
| !! | TATTATATGATTCAAGTATT+AGG | + | chr6_2:22167774-22167793 | Msa0912700:intron | 15.0% |
| !! | ATTATATGATTCAAGTATTA+GGG | + | chr6_2:22167775-22167794 | Msa0912700:intron | 15.0% |
| !! | TATTATATGATTCAAGTATT+AGG | + | chr6_2:22167774-22167793 | Msa0912700:intron | 15.0% |
| !! | ATTATATGATTCAAGTATTA+GGG | + | chr6_2:22167775-22167794 | Msa0912700:intron | 15.0% |
| !! | TGTAATAGGTATTAAAAAAT+TGG | + | chr6_2:22167902-22167921 | Msa0912700:intron | 15.0% |
| !! | GTAATAGGTATTAAAAAATT+GGG | + | chr6_2:22167903-22167922 | Msa0912700:intron | 15.0% |
| !! | TAATAGGTATTAAAAAATTG+GGG | + | chr6_2:22167904-22167923 | Msa0912700:intron | 15.0% |
| !! | CAAAAATATATTTACATGTT+TGG | + | chr6_2:22167981-22168000 | Msa0912700:intron | 15.0% |
| !! | ATATGTATGTACAAATAAAT+AGG | - | chr6_2:22168179-22168198 | None:intergenic | 15.0% |
| !!! | ATATGGATAATTTTTATAAG+TGG | - | chr6_2:22168483-22168502 | None:intergenic | 15.0% |
| !!! | TGTAACTTTAGAATATCTAA+TGG | - | chr6_2:22164518-22164537 | None:intergenic | 20.0% |
| !! | TAAAGAGAAAATTAACATAC+AGG | - | chr6_2:22164665-22164684 | None:intergenic | 20.0% |
| !! | AAAAACAAAATCTCATACAA+GGG | - | chr6_2:22164891-22164910 | None:intergenic | 20.0% |
| !! | TAAAAACAAAATCTCATACA+AGG | - | chr6_2:22164892-22164911 | None:intergenic | 20.0% |
| !! | CAAAAAAAAAATACGCTTTA+AGG | - | chr6_2:22165208-22165227 | None:intergenic | 20.0% |
| !!! | TAAAGCGTATTTTTTTTTTG+AGG | + | chr6_2:22165208-22165227 | Msa0912700:intron | 20.0% |
| !!! | AAAGCGTATTTTTTTTTTGA+GGG | + | chr6_2:22165209-22165228 | Msa0912700:intron | 20.0% |
| !! | TTAATTAAGTGATGAGAATT+TGG | + | chr6_2:22165518-22165537 | Msa0912700:intron | 20.0% |
| !!! | ATTTTTAAGAAAATGGAAAG+AGG | - | chr6_2:22165634-22165653 | None:intergenic | 20.0% |
| !! | CCTAAAATATAAGAAAACTT+AGG | - | chr6_2:22166118-22166137 | None:intergenic | 20.0% |
| !!! | CCTAAGTTTTCTTATATTTT+AGG | + | chr6_2:22166115-22166134 | Msa0912700:intron | 20.0% |
| !!! | GAAAGAGTTATTTTTTTTAG+AGG | - | chr6_2:22166190-22166209 | None:intergenic | 20.0% |
| !! | ATAAAAAAAAATTACACACG+TGG | + | chr6_2:22166462-22166481 | Msa0912700:intron | 20.0% |
| !!! | AATATTTTTGTTTTAATGCG+TGG | + | chr6_2:22166722-22166741 | Msa0912700:intron | 20.0% |
| !!! | TTTTAGAAATATCTAGAACT+GGG | + | chr6_2:22166856-22166875 | Msa0912700:intron | 20.0% |
| !!! | TTTTAACTTGTAAAGTTAGA+AGG | - | chr6_2:22167045-22167064 | None:intergenic | 20.0% |
| !!! | AAACCGTTATTTAATTTGTA+GGG | - | chr6_2:22167082-22167101 | None:intergenic | 20.0% |
| !!! | AAAACCGTTATTTAATTTGT+AGG | - | chr6_2:22167083-22167102 | None:intergenic | 20.0% |
| !!! | CAAAATTGACTTTTTGTAAA+AGG | - | chr6_2:22167123-22167142 | None:intergenic | 20.0% |
| !! | GTTATTAAAAAATGATGAGA+TGG | - | chr6_2:22167207-22167226 | None:intergenic | 20.0% |
| !! | TTAACAAATGTTACAAAGTT+AGG | + | chr6_2:22167262-22167281 | Msa0912700:intron | 20.0% |
| !!! | TTTTATTCCATATCATATGA+AGG | + | chr6_2:22167409-22167428 | Msa0912700:intron | 20.0% |
| !! | ATTATTGATGAAAAATGTTC+CGG | + | chr6_2:22167593-22167612 | Msa0912700:intron | 20.0% |
| !! | TTATATGATTCAAGTATTAG+GGG | + | chr6_2:22167776-22167795 | Msa0912700:intron | 20.0% |
| !! | TTATATGATTCAAGTATTAG+GGG | + | chr6_2:22167776-22167795 | Msa0912700:intron | 20.0% |
| !! | AAAAGTGAAAAATAAACATC+CGG | - | chr6_2:22168363-22168382 | None:intergenic | 20.0% |
| !! | AAGATAGAGAAAAGAAAATA+TGG | - | chr6_2:22168500-22168519 | None:intergenic | 20.0% |
| !!! | AATTTAGTTTTCTACATTGT+TGG | + | chr6_2:22168538-22168557 | Msa0912700:intron | 20.0% |
| !! | AAAATATTACTCTAGTATTG+TGG | - | chr6_2:22168583-22168602 | None:intergenic | 20.0% |
| !!! | TTCTAAAGTTACATCCAAAT+TGG | + | chr6_2:22164525-22164544 | Msa0912700:CDS | 25.0% |
| ! | TAACAACTCATGTTAGTATT+TGG | + | chr6_2:22164740-22164759 | Msa0912700:intron | 25.0% |
| !! | GTAAGCTGAATTTTCTTAAT+AGG | - | chr6_2:22164795-22164814 | None:intergenic | 25.0% |
| ! | TAAGAAAATTCAGCTTACTT+TGG | + | chr6_2:22164797-22164816 | Msa0912700:intron | 25.0% |
| ! | TAAAAAAAACTCAGCTCTTA+AGG | - | chr6_2:22165106-22165125 | None:intergenic | 25.0% |
| ! | AATTATTAATACCTCTCTTG+AGG | + | chr6_2:22165294-22165313 | Msa0912700:intron | 25.0% |
| ! | ATTATTAATACCTCTCTTGA+GGG | + | chr6_2:22165295-22165314 | Msa0912700:intron | 25.0% |
| ! | ATTAATTCTTCAAACTCGAT+AGG | - | chr6_2:22165344-22165363 | None:intergenic | 25.0% |
| ! | AATTTGGCATTATAATCTCA+AGG | + | chr6_2:22165534-22165553 | Msa0912700:intron | 25.0% |
| !!! | TCAATGAAGCTTAGATTTTT+TGG | - | chr6_2:22165876-22165895 | None:intergenic | 25.0% |
| ! | TTGTTTATATTTCATTCTGG+AGG | - | chr6_2:22166065-22166084 | None:intergenic | 25.0% |
| ! | TAAAAAAAACAACTCTTTCC+AGG | - | chr6_2:22166563-22166582 | None:intergenic | 25.0% |
| !!! | TGGAAAGAGTTGTTTTTTTT+AGG | + | chr6_2:22166562-22166581 | Msa0912700:intron | 25.0% |
| !!! | AAAGAGTTGTTTTTTTTAGG+AGG | + | chr6_2:22166565-22166584 | Msa0912700:intron | 25.0% |
| !!! | GACCGTCAATATATTTTTAA+GGG | + | chr6_2:22166744-22166763 | Msa0912700:intron | 25.0% |
| !!! | CTTTTAGAAATATCTAGAAC+TGG | + | chr6_2:22166855-22166874 | Msa0912700:intron | 25.0% |
| ! | GTGTACAATAATAGAATCTA+GGG | - | chr6_2:22166998-22167017 | None:intergenic | 25.0% |
| ! | TGTGTACAATAATAGAATCT+AGG | - | chr6_2:22166999-22167018 | None:intergenic | 25.0% |
| !! | ACAAGTTAAAATTGCGATTT+TGG | + | chr6_2:22167054-22167073 | Msa0912700:intron | 25.0% |
| ! | GATCCCTACAAATTAAATAA+CGG | + | chr6_2:22167076-22167095 | Msa0912700:intron | 25.0% |
| ! | GACAATGTATAATATATGCA+AGG | + | chr6_2:22167460-22167479 | Msa0912700:intron | 25.0% |
| ! | TATAATATATGCAAGGTATG+TGG | + | chr6_2:22167467-22167486 | Msa0912700:intron | 25.0% |
| !! | CTTCATATGATAAGGAATTT+TGG | - | chr6_2:22167511-22167530 | None:intergenic | 25.0% |
| ! | TTAGTCATCTTCATATGATA+AGG | - | chr6_2:22167519-22167538 | None:intergenic | 25.0% |
| ! | TATAATACTCCATCAAACAT+AGG | - | chr6_2:22167761-22167780 | None:intergenic | 25.0% |
| ! | TATATGATTCAAGTATTAGG+GGG | + | chr6_2:22167777-22167796 | Msa0912700:intron | 25.0% |
| ! | TATAATACTCCATCAAACAT+AGG | - | chr6_2:22167761-22167780 | None:intergenic | 25.0% |
| ! | CAACAAGAATCAATTGTAAT+AGG | + | chr6_2:22167888-22167907 | Msa0912700:intron | 25.0% |
| ! | TCAAATAGTATCATCAACTA+TGG | - | chr6_2:22168283-22168302 | None:intergenic | 25.0% |
| !! | TTTTTATAAGTGGTTCATTG+TGG | - | chr6_2:22168473-22168492 | None:intergenic | 25.0% |
| !! | TTAAAACCTTACTTTGAAAG+TGG | + | chr6_2:22168790-22168809 | Msa0912700:CDS | 25.0% |
| ! | TGAGTTGGAATAGTAATAGT+TGG | - | chr6_2:22164461-22164480 | None:intergenic | 30.0% |
| AATTAACATACAGGTAGATG+AGG | - | chr6_2:22164656-22164675 | None:intergenic | 30.0% | |
| AAGTGAAGTGGTGAAATTTA+AGG | + | chr6_2:22165740-22165759 | Msa0912700:CDS | 30.0% | |
| AAGGTTGGAGATGAAATATA+TGG | + | chr6_2:22165759-22165778 | Msa0912700:CDS | 30.0% | |
| AATATATGGTGACATCAATG+AGG | + | chr6_2:22165773-22165792 | Msa0912700:CDS | 30.0% | |
| CTTTCAAACCTAAAGATTCT+TGG | + | chr6_2:22165801-22165820 | Msa0912700:CDS | 30.0% | |
| AATAGCTGAAGAGAGATTAT+TGG | + | chr6_2:22165842-22165861 | Msa0912700:CDS | 30.0% | |
| ! | TTCTGGAGGAAATAGTTAAT+AGG | - | chr6_2:22166051-22166070 | None:intergenic | 30.0% |
| ! | TCACAACTTTGGAAAACTTA+GGG | - | chr6_2:22166594-22166613 | None:intergenic | 30.0% |
| ! | ATCACAACTTTGGAAAACTT+AGG | - | chr6_2:22166593-22166612 | None:intergenic | 30.0% |
| TGCATCAGAAAGTAAACTTA+GGG | - | chr6_2:22166219-22166238 | None:intergenic | 30.0% | |
| TTGCATCAGAAAGTAAACTT+AGG | - | chr6_2:22166220-22166239 | None:intergenic | 30.0% | |
| ! | TTTACTTTCCGTTGCAATTT+TGG | - | chr6_2:22166531-22166550 | None:intergenic | 30.0% |
| ! | GTTTTCCAAAGTTGTGATTT+TGG | - | chr6_2:22166163-22166182 | None:intergenic | 30.0% |
| ! | ATCACAACTTTGGAAAACTT+AGG | + | chr6_2:22166593-22166612 | Msa0912700:intron | 30.0% |
| ! | TCACAACTTTGGAAAACTTA+GGG | + | chr6_2:22166594-22166613 | Msa0912700:intron | 30.0% |
| CTCTCTCCGTAATAAAATAT+AGG | - | chr6_2:22166639-22166658 | None:intergenic | 30.0% | |
| !! | GGACCGTCAATATATTTTTA+AGG | + | chr6_2:22166743-22166762 | Msa0912700:intron | 30.0% |
| GGCCCTTAAAAATATATTGA+CGG | - | chr6_2:22166749-22166768 | None:intergenic | 30.0% | |
| ! | TTTCTAAAAGTTAGTTACGG+CGG | - | chr6_2:22166845-22166864 | None:intergenic | 30.0% |
| TGTAAAAGGGAGTAAAGATA+GGG | - | chr6_2:22167109-22167128 | None:intergenic | 30.0% | |
| TTGTAAAAGGGAGTAAAGAT+AGG | - | chr6_2:22167110-22167129 | None:intergenic | 30.0% | |
| ACAAATGTTACAAAGTTAGG+AGG | + | chr6_2:22167265-22167284 | Msa0912700:intron | 30.0% | |
| ! | CATATGATAAGGAATTTTGG+TGG | - | chr6_2:22167508-22167527 | None:intergenic | 30.0% |
| TAGGTCAATAAACTTTAGAC+AGG | - | chr6_2:22167742-22167761 | None:intergenic | 30.0% | |
| GTTTATTGACCTATGTTTGA+TGG | + | chr6_2:22167749-22167768 | Msa0912700:intron | 30.0% | |
| GTTTATTGACCTATGTTTGA+TGG | + | chr6_2:22167749-22167768 | Msa0912700:intron | 30.0% | |
| TAAAAAATTGGGGAGTGAAA+AGG | + | chr6_2:22167914-22167933 | Msa0912700:intron | 30.0% | |
| TTCTCCTTTGTATAATCGAT+TGG | - | chr6_2:22168103-22168122 | None:intergenic | 30.0% | |
| ! | ACACTACATCAAACTTTTCT+GGG | - | chr6_2:22168138-22168157 | None:intergenic | 30.0% |
| ! | TACACTACATCAAACTTTTC+TGG | - | chr6_2:22168139-22168158 | None:intergenic | 30.0% |
| AAGTTTGATGTAGTGTATGA+TGG | + | chr6_2:22168142-22168161 | Msa0912700:CDS | 30.0% | |
| TGTGAATCGTAAATATGAGA+AGG | - | chr6_2:22168323-22168342 | None:intergenic | 30.0% | |
| TCTCATATTTACGATTCACA+CGG | + | chr6_2:22168323-22168342 | Msa0912700:intron | 30.0% | |
| TTCTACATTGTTGGACTATA+CGG | + | chr6_2:22168547-22168566 | Msa0912700:intron | 30.0% | |
| AATTGACCACTTTCAAAGTA+AGG | - | chr6_2:22168799-22168818 | None:intergenic | 30.0% | |
| !! | GATCATTGGTTTCATGTAAT+GGG | - | chr6_2:22168927-22168946 | None:intergenic | 30.0% |
| !! | AGATCATTGGTTTCATGTAA+TGG | - | chr6_2:22168928-22168947 | None:intergenic | 30.0% |
| TTCCAACTCATACAAAAGCT+TGG | + | chr6_2:22164471-22164490 | Msa0912700:CDS | 35.0% | |
| ! | AACCAAGCTTTTGTATGAGT+TGG | - | chr6_2:22164476-22164495 | None:intergenic | 35.0% |
| CTTGTAATCTACCGGATTAA+GGG | - | chr6_2:22164603-22164622 | None:intergenic | 35.0% | |
| TCTTGTAATCTACCGGATTA+AGG | - | chr6_2:22164604-22164623 | None:intergenic | 35.0% | |
| TTAATCCGGTAGATTACAAG+AGG | + | chr6_2:22164603-22164622 | Msa0912700:CDS | 35.0% | |
| ACTAACTGAGCTAAGATCTT+GGG | - | chr6_2:22165022-22165041 | None:intergenic | 35.0% | |
| TACTAACTGAGCTAAGATCT+TGG | - | chr6_2:22165023-22165042 | None:intergenic | 35.0% | |
| AAGATCTTAGCTCAGTTAGT+AGG | + | chr6_2:22165022-22165041 | Msa0912700:intron | 35.0% | |
| AGATCTTAGCTCAGTTAGTA+GGG | + | chr6_2:22165023-22165042 | Msa0912700:intron | 35.0% | |
| ! | GTGAATAAGTGGAGTATTTG+AGG | - | chr6_2:22165084-22165103 | None:intergenic | 35.0% |
| GAATCTCATCACACTCTTTA+AGG | - | chr6_2:22165237-22165256 | None:intergenic | 35.0% | |
| ! | GTGAATTTTGTCACCCATAT+AGG | + | chr6_2:22165317-22165336 | Msa0912700:intron | 35.0% |
| AAACTCGATAGGACCTATAT+GGG | - | chr6_2:22165333-22165352 | None:intergenic | 35.0% | |
| TGCTGGCATAGTAATTAAAG+TGG | + | chr6_2:22165716-22165735 | Msa0912700:CDS | 35.0% | |
| GCTGGCATAGTAATTAAAGT+GGG | + | chr6_2:22165717-22165736 | Msa0912700:CDS | 35.0% | |
| AATTAAAGTGGGAAGTGAAG+TGG | + | chr6_2:22165728-22165747 | Msa0912700:CDS | 35.0% | |
| ! | GAAGTGGTGAAATTTAAGGT+TGG | + | chr6_2:22165744-22165763 | Msa0912700:CDS | 35.0% |
| ! | ACAAAGTGCCAAGAATCTTT+AGG | - | chr6_2:22165812-22165831 | None:intergenic | 35.0% |
| ! | ACAACTTTGGAAAACTTAGG+GGG | - | chr6_2:22166596-22166615 | None:intergenic | 35.0% |
| ! | CACAACTTTGGAAAACTTAG+GGG | - | chr6_2:22166595-22166614 | None:intergenic | 35.0% |
| CATCAGAAAGTAAACTTAGG+GGG | - | chr6_2:22166217-22166236 | None:intergenic | 35.0% | |
| GCATCAGAAAGTAAACTTAG+GGG | - | chr6_2:22166218-22166237 | None:intergenic | 35.0% | |
| GCGTTAACTGAGTCAAAATT+GGG | - | chr6_2:22166257-22166276 | None:intergenic | 35.0% | |
| AGCGTTAACTGAGTCAAAAT+TGG | - | chr6_2:22166258-22166277 | None:intergenic | 35.0% | |
| CAACGGAAAGTAAACTTAGA+GGG | + | chr6_2:22166537-22166556 | Msa0912700:intron | 35.0% | |
| ! | CACAACTTTGGAAAACTTAG+GGG | + | chr6_2:22166595-22166614 | Msa0912700:intron | 35.0% |
| ! | ACAACTTTGGAAAACTTAGG+GGG | + | chr6_2:22166596-22166615 | Msa0912700:intron | 35.0% |
| TGGTATTTATAGCCCTTTGT+GGG | - | chr6_2:22166934-22166953 | None:intergenic | 35.0% | |
| GTAAAAGGGAGTAAAGATAG+GGG | - | chr6_2:22167108-22167127 | None:intergenic | 35.0% | |
| ACGAAGACCTTCATATGATA+TGG | - | chr6_2:22167419-22167438 | None:intergenic | 35.0% | |
| !! | TAAGGAATTTTGGTGGTTAC+CGG | - | chr6_2:22167501-22167520 | None:intergenic | 35.0% |
| ATTGATGAAAAATGTTCCGG+AGG | + | chr6_2:22167596-22167615 | Msa0912700:intron | 35.0% | |
| AGGACTTCAGATACAATACA+GGG | + | chr6_2:22167616-22167635 | Msa0912700:intron | 35.0% | |
| GTCAATAAACTTTAGACAGG+TGG | - | chr6_2:22167739-22167758 | None:intergenic | 35.0% | |
| ! | GGAGTGAAAAGGATGTTTTA+AGG | + | chr6_2:22167925-22167944 | Msa0912700:intron | 35.0% |
| CTGAAAATTAGCACACATTG+AGG | + | chr6_2:22167955-22167974 | Msa0912700:intron | 35.0% | |
| AGATGCACCATAAACATGTT+TGG | - | chr6_2:22168017-22168036 | None:intergenic | 35.0% | |
| ! | CTGGAAAAATCGAGTTTTTG+AGG | + | chr6_2:22168059-22168078 | Msa0912700:CDS | 35.0% |
| !! | AATCGAGTTTTTGAGGAAGT+TGG | + | chr6_2:22168066-22168085 | Msa0912700:CDS | 35.0% |
| !! | ATCGAGTTTTTGAGGAAGTT+GGG | + | chr6_2:22168067-22168086 | Msa0912700:CDS | 35.0% |
| CTTGCCAATCGATTATACAA+AGG | + | chr6_2:22168096-22168115 | Msa0912700:CDS | 35.0% | |
| ATCTCTACAGACAAGTTCTT+TGG | + | chr6_2:22168197-22168216 | Msa0912700:intron | 35.0% | |
| !! | TGGTGGATCATTTTCATAAG+TGG | + | chr6_2:22168217-22168236 | Msa0912700:intron | 35.0% |
| ! | TTTTCATAAGTGGTCACTTG+TGG | + | chr6_2:22168227-22168246 | Msa0912700:intron | 35.0% |
| ! | ACATCACATAGTATCGAAGA+TGG | - | chr6_2:22168646-22168665 | None:intergenic | 35.0% |
| TCTTCGATACTATGTGATGT+AGG | + | chr6_2:22168646-22168665 | Msa0912700:intron | 35.0% | |
| CTTCGATACTATGTGATGTA+GGG | + | chr6_2:22168647-22168666 | Msa0912700:intron | 35.0% | |
| TTCGATACTATGTGATGTAG+GGG | + | chr6_2:22168648-22168667 | Msa0912700:intron | 35.0% | |
| TTCTTTGTGCTCACTTCTAA+AGG | + | chr6_2:22168751-22168770 | Msa0912700:CDS | 35.0% | |
| AAAATGGTATAGGAGTCTTG+GGG | - | chr6_2:22168837-22168856 | None:intergenic | 35.0% | |
| GAAAATGGTATAGGAGTCTT+GGG | - | chr6_2:22168838-22168857 | None:intergenic | 35.0% | |
| TGAAAATGGTATAGGAGTCT+TGG | - | chr6_2:22168839-22168858 | None:intergenic | 35.0% | |
| TTCAAGAGCTACTGGAAAAT+TGG | + | chr6_2:22168893-22168912 | Msa0912700:CDS | 35.0% | |
| TGCATCCTCTTGTAATCTAC+CGG | - | chr6_2:22164611-22164630 | None:intergenic | 40.0% | |
| CTAACTGAGCTAAGATCTTG+GGG | - | chr6_2:22165021-22165040 | None:intergenic | 40.0% | |
| CAGCTCTTAAGGTGAATAAG+TGG | - | chr6_2:22165095-22165114 | None:intergenic | 40.0% | |
| ACAAAATTCACCCTCAAGAG+AGG | - | chr6_2:22165308-22165327 | None:intergenic | 40.0% | |
| CAAACTCGATAGGACCTATA+TGG | - | chr6_2:22165334-22165353 | None:intergenic | 40.0% | |
| TTGTGTGAGAAGATTGTACC+AGG | + | chr6_2:22165684-22165703 | Msa0912700:intron | 40.0% | |
| TATGGTGACATCAATGAGGA+AGG | + | chr6_2:22165777-22165796 | Msa0912700:CDS | 40.0% | |
| TGCTAGCATTCCTTTAGCTA+TGG | + | chr6_2:22165899-22165918 | Msa0912700:CDS | 40.0% | |
| TAAGCTGTCTCCATAGCTAA+AGG | - | chr6_2:22165912-22165931 | None:intergenic | 40.0% | |
| TGGCAAATCTATCCTTGTCT+TGG | + | chr6_2:22165962-22165981 | Msa0912700:CDS | 40.0% | |
| GGCAAATCTATCCTTGTCTT+GGG | + | chr6_2:22165963-22165982 | Msa0912700:CDS | 40.0% | |
| AAATCTATCCTTGTCTTGGG+AGG | + | chr6_2:22165966-22165985 | Msa0912700:CDS | 40.0% | |
| !! | AGTTGGAAGCTTTGCTATTC+AGG | + | chr6_2:22165998-22166017 | Msa0912700:CDS | 40.0% |
| GAGGGCTAAAATCACAACTT+TGG | - | chr6_2:22166171-22166190 | None:intergenic | 40.0% | |
| ACTGAGTCAAAATTGGGCTA+GGG | - | chr6_2:22166251-22166270 | None:intergenic | 40.0% | |
| AACTGAGTCAAAATTGGGCT+AGG | - | chr6_2:22166252-22166271 | None:intergenic | 40.0% | |
| GCAACGGAAAGTAAACTTAG+AGG | + | chr6_2:22166536-22166555 | Msa0912700:intron | 40.0% | |
| ! | AGCCTTTCTATAGGGCTTTT+AGG | - | chr6_2:22166770-22166789 | None:intergenic | 40.0% |
| AAAGCCCTATAGAAAGGCTT+AGG | + | chr6_2:22166771-22166790 | Msa0912700:intron | 40.0% | |
| GTGGTATTTATAGCCCTTTG+TGG | - | chr6_2:22166935-22166954 | None:intergenic | 40.0% | |
| AGGGCTATAAATACCACTCT+TGG | + | chr6_2:22166938-22166957 | Msa0912700:intron | 40.0% | |
| GGGCTATAAATACCACTCTT+GGG | + | chr6_2:22166939-22166958 | Msa0912700:intron | 40.0% | |
| ! | TGAGATTAGCTCAGTTGGTA+GGG | + | chr6_2:22167438-22167457 | Msa0912700:intron | 40.0% |
| !! | AAGGAATTTTGGTGGTTACC+GGG | - | chr6_2:22167500-22167519 | None:intergenic | 40.0% |
| ! | GTATTGTATCTGAAGTCCTC+CGG | - | chr6_2:22167615-22167634 | None:intergenic | 40.0% |
| GAGGACTTCAGATACAATAC+AGG | + | chr6_2:22167615-22167634 | Msa0912700:intron | 40.0% | |
| GGACTTCAGATACAATACAG+GGG | + | chr6_2:22167617-22167636 | Msa0912700:intron | 40.0% | |
| GACTTCAGATACAATACAGG+GGG | + | chr6_2:22167618-22167637 | Msa0912700:intron | 40.0% | |
| TTCCTCTAACCAGACCTTAT+TGG | + | chr6_2:22167644-22167663 | Msa0912700:intron | 40.0% | |
| TCCTCTAACCAGACCTTATT+GGG | + | chr6_2:22167645-22167664 | Msa0912700:intron | 40.0% | |
| TGCTATTAGTGAGCCCAATA+AGG | - | chr6_2:22167661-22167680 | None:intergenic | 40.0% | |
| TGGGCTCACTAATAGCATAT+TGG | + | chr6_2:22167664-22167683 | Msa0912700:intron | 40.0% | |
| GGGCTCACTAATAGCATATT+GGG | + | chr6_2:22167665-22167684 | Msa0912700:intron | 40.0% | |
| TTTAGTCATGTGGGTAGGAA+AGG | - | chr6_2:22167714-22167733 | None:intergenic | 40.0% | |
| TTTCCTACCCACATGACTAA+AGG | + | chr6_2:22167713-22167732 | Msa0912700:intron | 40.0% | |
| CAGCTTGCCAAACATGTTTA+TGG | + | chr6_2:22168007-22168026 | Msa0912700:intron | 40.0% | |
| ! | GATGTAGTGTATGATGGAGT+AGG | + | chr6_2:22168148-22168167 | Msa0912700:CDS | 40.0% |
| TCTACAGACAAGTTCTTTGG+TGG | + | chr6_2:22168200-22168219 | Msa0912700:intron | 40.0% | |
| ! | CACATAGTATCGAAGATGGA+TGG | - | chr6_2:22168642-22168661 | None:intergenic | 40.0% |
| !! | TGATGTAGGGGAAGTTGATA+GGG | + | chr6_2:22168660-22168679 | Msa0912700:intron | 40.0% |
| TAGGGCTATGAAGGCAATTA+AGG | + | chr6_2:22168678-22168697 | Msa0912700:CDS | 40.0% | |
| GCTATGAAGGCAATTAAGGA+AGG | + | chr6_2:22168682-22168701 | Msa0912700:CDS | 40.0% | |
| ATGAAGGCAATTAAGGAAGG+TGG | + | chr6_2:22168685-22168704 | Msa0912700:CDS | 40.0% | |
| GTGAGCACAAAGAAAATAGC+CGG | - | chr6_2:22168745-22168764 | None:intergenic | 40.0% | |
| ACGACGTCTGAAAATGGTAT+AGG | - | chr6_2:22168847-22168866 | None:intergenic | 40.0% | |
| CTCTTGAAGTCTCTCTAAGT+AGG | - | chr6_2:22168881-22168900 | None:intergenic | 40.0% | |
| !! | GCTTGGTTCTACTCTGAACA+TGG | + | chr6_2:22164488-22164507 | Msa0912700:CDS | 45.0% |
| ! | AGTGGAGGTATGGACCAATT+TGG | - | chr6_2:22164542-22164561 | None:intergenic | 45.0% |
| GTCATCTTTGAGTGGAGGTA+TGG | - | chr6_2:22164552-22164571 | None:intergenic | 45.0% | |
| ACTTGGTCATCTTTGAGTGG+AGG | - | chr6_2:22164557-22164576 | None:intergenic | 45.0% | |
| ! | AGGACTTGGTCATCTTTGAG+TGG | - | chr6_2:22164560-22164579 | None:intergenic | 45.0% |
| AGATGACCAAGTCCTCATCA+AGG | + | chr6_2:22164565-22164584 | Msa0912700:CDS | 45.0% | |
| CAACAACCTTGATGAGGACT+TGG | - | chr6_2:22164574-22164593 | None:intergenic | 45.0% | |
| AAGCAGCAACAACCTTGATG+AGG | - | chr6_2:22164580-22164599 | None:intergenic | 45.0% | |
| ! | TGTTGCTGCTTCCCTTAATC+CGG | + | chr6_2:22164589-22164608 | Msa0912700:CDS | 45.0% |
| AGGATCAGTGTCCTTGAACA+AGG | - | chr6_2:22164636-22164655 | None:intergenic | 45.0% | |
| GCTATGGAGACAGCTTATGA+AGG | + | chr6_2:22165915-22165934 | Msa0912700:CDS | 45.0% | |
| ! | TGAGTCAAAATTGGGCTAGG+GGG | - | chr6_2:22166249-22166268 | None:intergenic | 45.0% |
| ! | CTGAGTCAAAATTGGGCTAG+GGG | - | chr6_2:22166250-22166269 | None:intergenic | 45.0% |
| GAAAGTAAACTTAGAGGGCC+TGG | + | chr6_2:22166542-22166561 | Msa0912700:intron | 45.0% | |
| GGAGGCCAAAATCACAACTT+TGG | + | chr6_2:22166583-22166602 | Msa0912700:intron | 45.0% | |
| GGCCTAAAAGCCCTATAGAA+AGG | + | chr6_2:22166765-22166784 | Msa0912700:intron | 45.0% | |
| ! | CTTCGTGAGATTAGCTCAGT+TGG | + | chr6_2:22167433-22167452 | Msa0912700:intron | 45.0% |
| ! | GTGAGATTAGCTCAGTTGGT+AGG | + | chr6_2:22167437-22167456 | Msa0912700:intron | 45.0% |
| AAGGTATGTGGTTCAAACCC+CGG | + | chr6_2:22167479-22167498 | Msa0912700:intron | 45.0% | |
| !! | AGGAATTTTGGTGGTTACCG+GGG | - | chr6_2:22167499-22167518 | None:intergenic | 45.0% |
| TTAGTGAGCCCAATAAGGTC+TGG | - | chr6_2:22167656-22167675 | None:intergenic | 45.0% | |
| ATAGCAGCAACTTCAAGCAC+TGG | + | chr6_2:22168040-22168059 | Msa0912700:CDS | 45.0% | |
| ! | GTATCGAAGATGGATGGACT+TGG | - | chr6_2:22168636-22168655 | None:intergenic | 45.0% |
| ! | GTGATGTAGGGGAAGTTGAT+AGG | + | chr6_2:22168659-22168678 | Msa0912700:intron | 45.0% |
| !! | GGAAGTTGATAGGGCTATGA+AGG | + | chr6_2:22168669-22168688 | Msa0912700:CDS | 45.0% |
| GTTGTGACAATAGTACCTCC+TGG | + | chr6_2:22168712-22168731 | Msa0912700:CDS | 45.0% | |
| AGCACAAAGAAAATAGCCGG+TGG | - | chr6_2:22168742-22168761 | None:intergenic | 45.0% | |
| GCTTCAACGACGTCTGAAAA+TGG | - | chr6_2:22168853-22168872 | None:intergenic | 45.0% | |
| AGAGAGACTTCAAGAGCTAC+TGG | + | chr6_2:22168885-22168904 | Msa0912700:CDS | 45.0% | |
| !!! | ATTTTTTTATTTATTTAAGA+AGG | + | chr6_2:22167236-22167255 | Msa0912700:intron | 5.0% |
| ! | GAGGATGCATGCCTTGTTCA+AGG | + | chr6_2:22164622-22164641 | Msa0912700:CDS | 50.0% |
| ! | GTACCAGGCTTTGATGTTGC+TGG | + | chr6_2:22165699-22165718 | Msa0912700:CDS | 50.0% |
| ATGCCAGCAACATCAAAGCC+TGG | - | chr6_2:22165705-22165724 | None:intergenic | 50.0% | |
| TGACTCAGTTAACGCTGACG+TGG | + | chr6_2:22166262-22166281 | Msa0912700:intron | 50.0% | |
| TCCGTTGACCGGGTCAAAAT+TGG | + | chr6_2:22166495-22166514 | Msa0912700:intron | 50.0% | |
| !! | GCCAATTTTGACCCGGTCAA+CGG | - | chr6_2:22166499-22166518 | None:intergenic | 50.0% |
| TGGGGGGACCAAAATTGCAA+CGG | + | chr6_2:22166520-22166539 | Msa0912700:intron | 50.0% | |
| GGCGCCTAAGCCTTTCTATA+GGG | - | chr6_2:22166778-22166797 | None:intergenic | 50.0% | |
| !! | GCTTTAGGAGCCCTTCTAGA+GGG | - | chr6_2:22166799-22166818 | None:intergenic | 50.0% |
| TAGAAGGGCTCCTAAAGCCT+AGG | + | chr6_2:22166801-22166820 | Msa0912700:intron | 50.0% | |
| ! | ACCTACAACCCAGCTTGCTT+GGG | + | chr6_2:22166886-22166905 | Msa0912700:intron | 50.0% |
| ACTTAAGCCCCAAGCAAGCT+GGG | - | chr6_2:22166897-22166916 | None:intergenic | 50.0% | |
| TACTTAAGCCCCAAGCAAGC+TGG | - | chr6_2:22166898-22166917 | None:intergenic | 50.0% | |
| ACGCTAACACAAGCCCACAA+AGG | + | chr6_2:22166918-22166937 | Msa0912700:intron | 50.0% | |
| CGCTAACACAAGCCCACAAA+GGG | + | chr6_2:22166919-22166938 | Msa0912700:intron | 50.0% | |
| CTTGCGAATGATCCCAAGAG+TGG | - | chr6_2:22166954-22166973 | None:intergenic | 50.0% | |
| GCCCAATAAGGTCTGGTTAG+AGG | - | chr6_2:22167649-22167668 | None:intergenic | 50.0% | |
| AAGGCAATGAGGCTGCACAT+AGG | - | chr6_2:22167695-22167714 | None:intergenic | 50.0% | |
| TGTGGGTAGGAAAGGCAATG+AGG | - | chr6_2:22167706-22167725 | None:intergenic | 50.0% | |
| TGGCCTTTAGTCATGTGGGT+AGG | - | chr6_2:22167719-22167738 | None:intergenic | 50.0% | |
| CAGGTGGCCTTTAGTCATGT+GGG | - | chr6_2:22167723-22167742 | None:intergenic | 50.0% | |
| ACAGGTGGCCTTTAGTCATG+TGG | - | chr6_2:22167724-22167743 | None:intergenic | 50.0% | |
| CACGGTGACTTAATCGATGC+CGG | + | chr6_2:22168341-22168360 | Msa0912700:intron | 50.0% | |
| AAAATAGCCGGTGGACATCC+AGG | - | chr6_2:22168733-22168752 | None:intergenic | 50.0% | |
| GAGAGAGCTGAGCTTTCTGC+TGG | + | chr6_2:22165942-22165961 | Msa0912700:CDS | 55.0% | |
| ! | ATCCTTGTCTTGGGAGGTGC+TGG | + | chr6_2:22165972-22165991 | Msa0912700:CDS | 55.0% |
| TGACCGGGTCAAAATTGGCG+TGG | + | chr6_2:22166500-22166519 | Msa0912700:intron | 55.0% | |
| GACCGGGTCAAAATTGGCGT+GGG | + | chr6_2:22166501-22166520 | Msa0912700:intron | 55.0% | |
| ACCGGGTCAAAATTGGCGTG+GGG | + | chr6_2:22166502-22166521 | Msa0912700:intron | 55.0% | |
| GGGCGCCTAAGCCTTTCTAT+AGG | - | chr6_2:22166779-22166798 | None:intergenic | 55.0% | |
| !! | GGCTTTAGGAGCCCTTCTAG+AGG | - | chr6_2:22166800-22166819 | None:intergenic | 55.0% |
| ! | TTACGGCGGCACCTCTAGAA+GGG | - | chr6_2:22166831-22166850 | None:intergenic | 55.0% |
| ! | GACCTACAACCCAGCTTGCT+TGG | + | chr6_2:22166885-22166904 | Msa0912700:intron | 55.0% |
| ! | CCTACAACCCAGCTTGCTTG+GGG | + | chr6_2:22166887-22166906 | Msa0912700:intron | 55.0% |
| !! | CGCATGAGTGAGCACTGACT+TGG | - | chr6_2:22167147-22167166 | None:intergenic | 55.0% |
| CAATGAGGCTGCACATAGGC+TGG | - | chr6_2:22167691-22167710 | None:intergenic | 55.0% | |
| AGTACCTCCTGGATGTCCAC+CGG | + | chr6_2:22168723-22168742 | Msa0912700:CDS | 55.0% | |
| GGAGTCTTGGGGTCAAGTCT+TGG | - | chr6_2:22168826-22168845 | None:intergenic | 55.0% | |
| CACCAGCACCTCCCAAGACA+AGG | - | chr6_2:22165977-22165996 | None:intergenic | 60.0% | |
| !! | CTTGTCTTGGGAGGTGCTGG+TGG | + | chr6_2:22165975-22165994 | Msa0912700:CDS | 60.0% |
| !! | TTGGGAGGTGCTGGTGGAGT+TGG | + | chr6_2:22165981-22166000 | Msa0912700:CDS | 60.0% |
| !! | CCCCCACGCCAATTTTGACC+CGG | - | chr6_2:22166506-22166525 | None:intergenic | 60.0% |
| CCGGGTCAAAATTGGCGTGG+GGG | + | chr6_2:22166503-22166522 | Msa0912700:intron | 60.0% | |
| CGGGTCAAAATTGGCGTGGG+GGG | + | chr6_2:22166504-22166523 | Msa0912700:intron | 60.0% | |
| AGGCTTAGGCGCCCTCTAGA+AGG | + | chr6_2:22166785-22166804 | Msa0912700:intron | 60.0% | |
| ! | GGCTTAGGCGCCCTCTAGAA+GGG | + | chr6_2:22166786-22166805 | Msa0912700:intron | 60.0% |
| GTTACGGCGGCACCTCTAGA+AGG | - | chr6_2:22166832-22166851 | None:intergenic | 60.0% | |
| CCCCAAGCAAGCTGGGTTGT+AGG | - | chr6_2:22166890-22166909 | None:intergenic | 60.0% | |
| ATAGCCGGTGGACATCCAGG+AGG | - | chr6_2:22168730-22168749 | None:intergenic | 60.0% | |
| GTGCCCACGTGTCCGTTGAC+CGG | + | chr6_2:22166484-22166503 | Msa0912700:intron | 65.0% | |
| TGCCCACGTGTCCGTTGACC+GGG | + | chr6_2:22166485-22166504 | Msa0912700:intron | 65.0% | |
| GACCCGGTCAACGGACACGT+GGG | - | chr6_2:22166490-22166509 | None:intergenic | 65.0% | |
| TGACCCGGTCAACGGACACG+TGG | - | chr6_2:22166491-22166510 | None:intergenic | 65.0% | |
| ! | GAAGGGCGCGCCTAGGCTTT+AGG | - | chr6_2:22166814-22166833 | None:intergenic | 65.0% |
| ! | ACCTCTAGAAGGGCGCGCCT+AGG | - | chr6_2:22166821-22166840 | None:intergenic | 65.0% |
| GCCTAGGCGCGCCCTTCTAG+AGG | + | chr6_2:22166817-22166836 | Msa0912700:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_2 | gene | 22164431 | 22168954 | 22164431 | ID=Msa0912700;Name=Msa0912700 |
| chr6_2 | mRNA | 22164431 | 22168954 | 22164431 | ID=Msa0912700-mRNA-1;Parent=Msa0912700;Name=Msa0912700-mRNA-1;_AED=0.04;_eAED=0.08;_QI=0|0|0|1|1|1|4|0|334 |
| chr6_2 | exon | 22164431 | 22164664 | 22164431 | ID=Msa0912700-mRNA-1:exon:4355;Parent=Msa0912700-mRNA-1 |
| chr6_2 | exon | 22165696 | 22166019 | 22165696 | ID=Msa0912700-mRNA-1:exon:4356;Parent=Msa0912700-mRNA-1 |
| chr6_2 | exon | 22168010 | 22168169 | 22168010 | ID=Msa0912700-mRNA-1:exon:4357;Parent=Msa0912700-mRNA-1 |
| chr6_2 | exon | 22168668 | 22168954 | 22168668 | ID=Msa0912700-mRNA-1:exon:4358;Parent=Msa0912700-mRNA-1 |
| chr6_2 | CDS | 22164431 | 22164664 | 22164431 | ID=Msa0912700-mRNA-1:cds;Parent=Msa0912700-mRNA-1 |
| chr6_2 | CDS | 22165696 | 22166019 | 22165696 | ID=Msa0912700-mRNA-1:cds;Parent=Msa0912700-mRNA-1 |
| chr6_2 | CDS | 22168010 | 22168169 | 22168010 | ID=Msa0912700-mRNA-1:cds;Parent=Msa0912700-mRNA-1 |
| chr6_2 | CDS | 22168668 | 22168954 | 22168668 | ID=Msa0912700-mRNA-1:cds;Parent=Msa0912700-mRNA-1 |
| Gene Sequence |
| Protein sequence |
