AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0987020


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0987020 MtrunA17_Chr6g0465501 94.801 327 17 0 1 327 1 327 0.0 603
Msa0987020 MtrunA17_Chr6g0466321 94.801 327 17 0 1 327 1 327 0.0 602
Msa0987020 MtrunA17_Chr7g0228011 72.669 311 85 0 17 327 6 316 7.38e-147 416
Msa0987020 MtrunA17_Chr8g0365421 61.610 323 122 2 6 327 62 383 1.11e-143 410
Msa0987020 MtrunA17_Chr6g0453201 68.153 314 100 0 14 327 6 319 3.23e-143 407
Msa0987020 MtrunA17_Chr6g0453191 67.474 289 94 0 14 302 6 294 6.26e-130 373
Msa0987020 MtrunA17_Chr8g0351271 46.104 308 158 6 20 324 5 307 2.72e-81 250
Msa0987020 MtrunA17_Chr8g0351481 46.104 308 158 6 20 324 5 307 4.04e-81 249
Msa0987020 MtrunA17_Chr6g0465551 91.250 80 7 0 1 80 1 80 6.12e-49 158
Msa0987020 MtrunA17_Chr4g0015051 31.657 338 186 10 20 326 7 330 4.21e-33 125
Msa0987020 MtrunA17_Chr4g0014541 31.348 319 178 8 37 326 23 329 1.28e-32 123
Msa0987020 MtrunA17_Chr4g0014691 31.348 319 178 8 37 326 23 329 1.29e-32 123
Msa0987020 MtrunA17_Chr4g0014951 31.437 334 184 11 24 326 11 330 1.43e-31 120
Msa0987020 MtrunA17_Chr4g0014971 31.045 335 192 10 20 326 7 330 5.60e-30 116
Msa0987020 MtrunA17_Chr4g0015091 30.769 312 175 9 42 324 28 327 5.67e-30 116
Msa0987020 MtrunA17_Chr2g0316731 34.109 258 154 8 9 259 16 264 6.91e-29 114
Msa0987020 MtrunA17_Chr7g0235021 31.118 331 190 11 20 323 7 326 7.34e-29 113
Msa0987020 MtrunA17_Chr4g0014931 30.294 340 188 11 20 326 7 330 5.61e-27 108
Msa0987020 MtrunA17_Chr4g0045041 27.414 321 180 9 44 324 313 620 1.53e-23 101
Msa0987020 MtrunA17_Chr4g0045061 26.791 321 182 9 44 324 313 620 2.20e-22 97.8
Msa0987020 MtrunA17_Chr2g0281301 26.765 340 202 13 17 324 12 336 4.47e-22 95.1
Msa0987020 MtrunA17_Chr2g0281281 26.415 318 181 12 43 324 23 323 4.12e-19 86.7
Msa0987020 MtrunA17_Chr3g0128511 32.389 247 140 8 26 259 18 250 1.10e-18 85.5
Msa0987020 MtrunA17_Chr4g0015001 29.258 229 132 6 122 324 5 229 7.55e-13 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0987020 AT1G23740.1 61.709 316 120 1 12 327 71 385 9.98e-137 393
Msa0987020 AT4G13010.1 30.094 319 182 8 37 326 23 329 9.73e-29 113
Msa0987020 AT3G15090.1 33.992 253 151 9 14 259 27 270 5.75e-27 109
Msa0987020 AT3G56460.1 34.979 243 131 8 30 259 23 251 3.13e-25 104
Msa0987020 AT4G21580.1 27.353 340 194 12 20 324 2 323 8.64e-23 97.1
Msa0987020 AT1G49670.1 28.076 317 179 10 44 324 313 616 1.14e-22 99.0
Msa0987020 AT4G21580.3 27.059 340 189 13 20 324 2 317 4.83e-21 92.0
Msa0987020 AT4G21580.2 25.088 283 164 9 74 324 24 290 8.30e-14 71.2

Find 79 sgRNAs with CRISPR-Local

Find 332 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGTTGGAAGCTTTGCTATTC+AGG 0.194050 6_4:+36580633 Msa0987020:CDS
CAGCTTGCCAAACATGTTTA+TGG 0.207808 6_4:+36582640 Msa0987020:intron
TCTTGTAATCAACAGGATTA+AGG 0.247743 6_4:-36579123 None:intergenic
TTCAAGAGCTACTGGAAAAT+TGG 0.285794 6_4:+36583524 Msa0987020:CDS
GATCATTGGTTTCATGTAAT+GGG 0.290307 6_4:-36583555 None:intergenic
ACAAAGTGCCAAGAATCTTT+AGG 0.297216 6_4:-36580444 None:intergenic
AATAGCTGAAGAGAGATTAT+TGG 0.302420 6_4:+36580477 Msa0987020:CDS
CTTTCAAACCTAAAGATTCT+TGG 0.317314 6_4:+36580436 Msa0987020:CDS
TTCTAAAGTTACATCCAAAT+TGG 0.322662 6_4:+36579047 Msa0987020:CDS
TAGGGCTATGAAGGCAATTA+AGG 0.325646 6_4:+36583311 Msa0987020:CDS
GCTTCAACGACGTCTGAAAA+TGG 0.328542 6_4:-36583483 None:intergenic
AAGTGAAGTGGTGAAATTTA+AGG 0.335007 6_4:+36580375 Msa0987020:CDS
AGTGGAGGTATGGACCAATT+TGG 0.348819 6_4:-36579061 None:intergenic
GTACCAGGCTTTGATGTTGC+TGG 0.358510 6_4:+36580334 Msa0987020:CDS
AGATCATTGGTTTCATGTAA+TGG 0.359036 6_4:-36583556 None:intergenic
GTGATGTAGGGGAAGTTGAT+AGG 0.368988 6_4:+36583292 Msa0987020:intron
CTTGTAATCAACAGGATTAA+GGG 0.375473 6_4:-36579122 None:intergenic
TTCTTTGTGCTCACTTCTAA+AGG 0.381735 6_4:+36583384 Msa0987020:CDS
TTGGGAGGTGCTGGTGGAGT+TGG 0.387165 6_4:+36580616 Msa0987020:CDS
ATCCTTGTCTTGGGAGGTGC+TGG 0.395417 6_4:+36580607 Msa0987020:CDS
GAAAATGGTATAGGAGTCTT+GGG 0.397714 6_4:-36583468 None:intergenic
AATTGACCACTTTCAAAGTA+AGG 0.400640 6_4:-36583429 None:intergenic
TGCATCCTCTTGTAATCAAC+AGG 0.411281 6_4:-36579130 None:intergenic
GTCATCTTTGAGTGGAGGTA+TGG 0.413772 6_4:-36579071 None:intergenic
AGATGCACCATAAACATGTT+TGG 0.415334 6_4:-36582647 None:intergenic
AAGGTTGGAGATGAAATATA+TGG 0.416415 6_4:+36580394 Msa0987020:CDS
AGGGTCAGTGTCCTTGAATA+AGG 0.428200 6_4:-36579155 None:intergenic
TTCTCCTTTGTATAATCGAT+TGG 0.434467 6_4:-36582733 None:intergenic
TGTAACTTTAGAATATCTAA+TGG 0.437701 6_4:-36579037 None:intergenic
GGCAAATCAATCCTTGTCTT+GGG 0.448792 6_4:+36580598 Msa0987020:CDS
GGAGTCTTGGGGTCAAGTCT+TGG 0.450924 6_4:-36583456 None:intergenic
ACGACGTCTGAAAATGGTAT+AGG 0.451761 6_4:-36583477 None:intergenic
TTAGAGACTTCAAGAGCTAC+TGG 0.452457 6_4:+36583516 Msa0987020:CDS
TGGCAAATCAATCCTTGTCT+TGG 0.459766 6_4:+36580597 Msa0987020:CDS
TGAAAATGGTATAGGAGTCT+TGG 0.460489 6_4:-36583469 None:intergenic
TGATGTAGGGGAAGTTGATA+GGG 0.461956 6_4:+36583293 Msa0987020:intron
TTAAAACCTTACTTTGAAAG+TGG 0.467816 6_4:+36583423 Msa0987020:CDS
AAAATAGCCGGTGGACATCC+AGG 0.476139 6_4:-36583363 None:intergenic
CTTGTCTTGGGAGGTGCTGG+TGG 0.497346 6_4:+36580610 Msa0987020:CDS
GAGGATGCATGCCTTATTCA+AGG 0.499881 6_4:+36579144 Msa0987020:CDS
TTCCAACTCATACAAAAGCT+TGG 0.500152 6_4:+36578993 Msa0987020:CDS
GAGAGAGCTGAGCTTTCTGC+TGG 0.500936 6_4:+36580577 Msa0987020:CDS
CAACAACCTTGATGAGGACT+TGG 0.502267 6_4:-36579093 None:intergenic
GGAAGTTGATAGGGCTATGA+AGG 0.506979 6_4:+36583302 Msa0987020:CDS
GTTGGAATAGTAATATTAGT+AGG 0.508279 6_4:-36578977 None:intergenic
TGCTAGCATTCCTTTAGCTA+TGG 0.523185 6_4:+36580534 Msa0987020:CDS
TAAGCTGTCTCCATAGCTAA+AGG 0.523414 6_4:-36580544 None:intergenic
TTAATCCTGTTGATTACAAG+AGG 0.525834 6_4:+36579125 Msa0987020:CDS
GCTATGGAGACAGCTTATGA+AGG 0.536850 6_4:+36580550 Msa0987020:CDS
ATAGCAGCAACTTCAAGCAC+TGG 0.540422 6_4:+36582673 Msa0987020:CDS
AAGTTTGATGTAGTGTATGA+TGG 0.540914 6_4:+36582775 Msa0987020:CDS
GAAGTGGTGAAATTTAAGGT+TGG 0.542994 6_4:+36580379 Msa0987020:CDS
GTTGTGACAATAGTACCTCC+TGG 0.547377 6_4:+36583345 Msa0987020:CDS
AGCTCTTGAAGTCTCTAAGT+AGG 0.563893 6_4:-36583511 None:intergenic
TGCTGGCATAGTAATTAAAG+TGG 0.567681 6_4:+36580351 Msa0987020:CDS
GTGAGCACAAAGAAAATAGC+CGG 0.573204 6_4:-36583375 None:intergenic
AGTTAACATACAGGTAGATG+AGG 0.585165 6_4:-36579175 None:intergenic
CACCAGCACCTCCCAAGACA+AGG 0.587985 6_4:-36580609 None:intergenic
GATGTAGTGTATGATGGAGT+AGG 0.591662 6_4:+36582781 Msa0987020:CDS
GCTTGGTTCTACTCTGAACA+TGG 0.593786 6_4:+36579010 Msa0987020:CDS
TTGTGTGAGAAGATTGTACC+AGG 0.597513 6_4:+36580319 Msa0987020:intron
ATGCCAGCAACATCAAAGCC+TGG 0.598693 6_4:-36580337 None:intergenic
AATTAAAGTGGGAAGTGAAG+TGG 0.601756 6_4:+36580363 Msa0987020:CDS
AGTACCTCCTGGATGTCCAC+CGG 0.607633 6_4:+36583356 Msa0987020:CDS
AGGACTTGGTCATCTTTGAG+TGG 0.609008 6_4:-36579079 None:intergenic
TATGGTGACATCAATGAGGA+AGG 0.611730 6_4:+36580412 Msa0987020:CDS
ACTTGGTCATCTTTGAGTGG+AGG 0.616451 6_4:-36579076 None:intergenic
CTTGCCAATCGATTATACAA+AGG 0.618334 6_4:+36582729 Msa0987020:CDS
AGATGACCAAGTCCTCATCA+AGG 0.619767 6_4:+36579087 Msa0987020:CDS
AAATCAATCCTTGTCTTGGG+AGG 0.630930 6_4:+36580601 Msa0987020:CDS
GCTGGCATAGTAATTAAAGT+GGG 0.631964 6_4:+36580352 Msa0987020:CDS
ATGAAGGCAATTAAGGAAGG+TGG 0.640781 6_4:+36583318 Msa0987020:CDS
GCTATGAAGGCAATTAAGGA+AGG 0.645710 6_4:+36583315 Msa0987020:CDS
GTTAACATACAGGTAGATGA+GGG 0.655572 6_4:-36579174 None:intergenic
AAGCAGCAACAACCTTGATG+AGG 0.675221 6_4:-36579099 None:intergenic
AGCACAAAGAAAATAGCCGG+TGG 0.680600 6_4:-36583372 None:intergenic
AATATATGGTGACATCAATG+AGG 0.688125 6_4:+36580408 Msa0987020:CDS
AAAATGGTATAGGAGTCTTG+GGG 0.746854 6_4:-36583467 None:intergenic
ATAGCCGGTGGACATCCAGG+AGG 0.794463 6_4:-36583360 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAAATAAAAAAATTAAAA+GGG - chr6_4:36581865-36581884 None:intergenic 0.0%
!! AAATAAATAAAAAAATTAAA+AGG - chr6_4:36581866-36581885 None:intergenic 0.0%
!!! TTAATTTTTTTATTTATTTA+AGG + chr6_4:36581867-36581886 Msa0987020:intron 0.0%
!!! TGTATTTTTTTTTATATACT+AGG + chr6_4:36579742-36579761 Msa0987020:intron 10.0%
!!! AGTGTTATTTTTATATATAA+TGG - chr6_4:36580220-36580239 None:intergenic 10.0%
!! AAATACAAAAATATTAAAGT+GGG - chr6_4:36580925-36580944 None:intergenic 10.0%
!! AAAATACAAAAATATTAAAG+TGG - chr6_4:36580926-36580945 None:intergenic 10.0%
!!! ATTAAACCTATATTTTATTA+CGG + chr6_4:36581264-36581283 Msa0987020:intron 10.0%
!!! ATTTTTTTATTTATTTAAGG+AGG + chr6_4:36581870-36581889 Msa0987020:intron 10.0%
!!! ACTTTTTATAAATTGTGTTT+AGG - chr6_4:36579486-36579505 None:intergenic 15.0%
!! AAAAACAAAATCTAATACAA+GGG - chr6_4:36579520-36579539 None:intergenic 15.0%
!! TAAAAACAAAATCTAATACA+AGG - chr6_4:36579521-36579540 None:intergenic 15.0%
!! TTTATAAAAATTGAACATCA+AGG + chr6_4:36580128-36580147 Msa0987020:intron 15.0%
!!! TTTATATATAATGGTTCTAA+AGG - chr6_4:36580211-36580230 None:intergenic 15.0%
!!! ATGAATGATTTTTAAGAAAA+TGG - chr6_4:36580276-36580295 None:intergenic 15.0%
!!! TTTTTGTTTATATTTCATTC+TGG - chr6_4:36580703-36580722 None:intergenic 15.0%
!! CTAAAATATAAGAAAACTTA+GGG - chr6_4:36580752-36580771 None:intergenic 15.0%
!!! AAAGAGTTATTTTTTTTAGA+GGG - chr6_4:36580824-36580843 None:intergenic 15.0%
!! TAAAAAAAATAACTCTTTCT+AGG + chr6_4:36580826-36580845 Msa0987020:intron 15.0%
!!! ATATTTCTAAAAGTTAGTTA+CGG - chr6_4:36581482-36581501 None:intergenic 15.0%
!!! AAAATTGACTTTTTGTAAAA+AGG - chr6_4:36581756-36581775 None:intergenic 15.0%
!! ATATTACATAGACTAAAATA+GGG - chr6_4:36582013-36582032 None:intergenic 15.0%
!! AATATTACATAGACTAAAAT+AGG - chr6_4:36582014-36582033 None:intergenic 15.0%
!! TATTATATGATTCAAGTATT+AGG + chr6_4:36582407-36582426 Msa0987020:intron 15.0%
!! ATTATATGATTCAAGTATTA+GGG + chr6_4:36582408-36582427 Msa0987020:intron 15.0%
!! TATTATATGATTCAAGTATT+AGG + chr6_4:36582407-36582426 Msa0987020:intron 15.0%
!! ATTATATGATTCAAGTATTA+GGG + chr6_4:36582408-36582427 Msa0987020:intron 15.0%
!! TGTAATAGGTATTAAAAAAT+TGG + chr6_4:36582535-36582554 Msa0987020:intron 15.0%
!! GTAATAGGTATTAAAAAATT+GGG + chr6_4:36582536-36582555 Msa0987020:intron 15.0%
!! TAATAGGTATTAAAAAATTG+GGG + chr6_4:36582537-36582556 Msa0987020:intron 15.0%
!! CAAAAATATATTTACATGTT+TGG + chr6_4:36582614-36582633 Msa0987020:intron 15.0%
!! ATATGTATGTACAAATAAAT+AGG - chr6_4:36582812-36582831 None:intergenic 15.0%
!!! ATATGGATAATTTTTATAAG+TGG - chr6_4:36583116-36583135 None:intergenic 15.0%
!!! TGTAACTTTAGAATATCTAA+TGG - chr6_4:36579040-36579059 None:intergenic 20.0%
!! AATTTATAAGGTGAATAAGT+GGG - chr6_4:36579331-36579350 None:intergenic 20.0%
!! TACACATTATATGTAGAAAA+AGG + chr6_4:36579679-36579698 Msa0987020:intron 20.0%
!! ACACATTATATGTAGAAAAA+GGG + chr6_4:36579680-36579699 Msa0987020:intron 20.0%
!! AAAAAAAAATACAGCTCTTA+AGG - chr6_4:36579735-36579754 None:intergenic 20.0%
!!! TAAACCGTATTTTTTTTTTG+AGG + chr6_4:36579840-36579859 Msa0987020:intron 20.0%
!!! AAACCGTATTTTTTTTTTGA+GGG + chr6_4:36579841-36579860 Msa0987020:intron 20.0%
!! ATTAATTCTTCAAACTTGAT+AGG - chr6_4:36579976-36579995 None:intergenic 20.0%
!! TTAATTAAGTGATGAGAATT+TGG + chr6_4:36580153-36580172 Msa0987020:intron 20.0%
!!! ATTTTTAAGAAAATGGAAAG+AGG - chr6_4:36580269-36580288 None:intergenic 20.0%
!! CCTAAAATATAAGAAAACTT+AGG - chr6_4:36580753-36580772 None:intergenic 20.0%
!!! CCTAAGTTTTCTTATATTTT+AGG + chr6_4:36580750-36580769 Msa0987020:intron 20.0%
!!! GAAAGAGTTATTTTTTTTAG+AGG - chr6_4:36580825-36580844 None:intergenic 20.0%
!! ATAAAAAAAAATTACACACG+TGG + chr6_4:36581096-36581115 Msa0987020:intron 20.0%
!!! AATATTTTTGTTTTAATGCG+TGG + chr6_4:36581356-36581375 Msa0987020:intron 20.0%
!!! TTTTAGAAATATCTAGAACT+GGG + chr6_4:36581490-36581509 Msa0987020:intron 20.0%
!!! TTTTAACTTGTAAAGTTAGA+AGG - chr6_4:36581679-36581698 None:intergenic 20.0%
!!! AAACCGTTATTTAATTTGTA+GGG - chr6_4:36581716-36581735 None:intergenic 20.0%
!!! AAAACCGTTATTTAATTTGT+AGG - chr6_4:36581717-36581736 None:intergenic 20.0%
!! GTTATTAAAAAATGATGAGA+TGG - chr6_4:36581841-36581860 None:intergenic 20.0%
!! TTAACAAATGTTACAAAGTT+AGG + chr6_4:36581896-36581915 Msa0987020:intron 20.0%
!!! TTTTATTCCATATCATATGA+AGG + chr6_4:36582042-36582061 Msa0987020:intron 20.0%
!! ATTATTGATGAAAAATGTTC+CGG + chr6_4:36582226-36582245 Msa0987020:intron 20.0%
!! TTATATGATTCAAGTATTAG+GGG + chr6_4:36582409-36582428 Msa0987020:intron 20.0%
!! TTATATGATTCAAGTATTAG+GGG + chr6_4:36582409-36582428 Msa0987020:intron 20.0%
!! AAAAGTGAAAAATAAACATC+CGG - chr6_4:36582996-36583015 None:intergenic 20.0%
!!! TTTTAAGTATTAATCCACAA+TGG + chr6_4:36583089-36583108 Msa0987020:intron 20.0%
!! AAGATAGAGAAAAGAAAATA+TGG - chr6_4:36583133-36583152 None:intergenic 20.0%
!!! AATTTAGTTTTCTACATTGT+TGG + chr6_4:36583171-36583190 Msa0987020:intron 20.0%
!! AAAATATTACTCTAGTATTG+TGG - chr6_4:36583216-36583235 None:intergenic 20.0%
! GTTGGAATAGTAATATTAGT+AGG - chr6_4:36578980-36578999 None:intergenic 25.0%
!!! TTCTAAAGTTACATCCAAAT+TGG + chr6_4:36579047-36579066 Msa0987020:CDS 25.0%
! TAAAGAGAAAGTTAACATAC+AGG - chr6_4:36579187-36579206 None:intergenic 25.0%
! ATTTATAAGGTGAATAAGTG+GGG - chr6_4:36579330-36579349 None:intergenic 25.0%
! CAATTTATAAGGTGAATAAG+TGG - chr6_4:36579332-36579351 None:intergenic 25.0%
! TGGCTAGAATTCAATTTATA+AGG - chr6_4:36579343-36579362 None:intergenic 25.0%
! AAACAACTCATGTTAGTATT+TGG + chr6_4:36579389-36579408 Msa0987020:intron 25.0%
!! GTAAGCTGAATTTTCTTAAT+AGG - chr6_4:36579444-36579463 None:intergenic 25.0%
! TAAGAAAATTCAGCTTACTT+TGG + chr6_4:36579446-36579465 Msa0987020:intron 25.0%
! CACATTATATGTAGAAAAAG+GGG + chr6_4:36579681-36579700 Msa0987020:intron 25.0%
! GTTCCCTCAAAAAAAAAATA+CGG - chr6_4:36579847-36579866 None:intergenic 25.0%
! AATTATTAATACCTCTCTTG+AGG + chr6_4:36579926-36579945 Msa0987020:intron 25.0%
! ATTATTAATACCTCTCTTGA+GGG + chr6_4:36579927-36579946 Msa0987020:intron 25.0%
! AATTTGGCATTATAATCTCA+AGG + chr6_4:36580169-36580188 Msa0987020:intron 25.0%
!!! TCAATGAAGCTTAGATTTTT+TGG - chr6_4:36580511-36580530 None:intergenic 25.0%
! TTGTTTATATTTCATTCTGG+AGG - chr6_4:36580700-36580719 None:intergenic 25.0%
!! TTTACTTTCTGATGCAATTT+TGG + chr6_4:36580858-36580877 Msa0987020:intron 25.0%
! TAAAAAAAACAACTCTTTCC+AGG - chr6_4:36581197-36581216 None:intergenic 25.0%
!!! TGGAAAGAGTTGTTTTTTTT+AGG + chr6_4:36581196-36581215 Msa0987020:intron 25.0%
!!! AAAGAGTTGTTTTTTTTAGG+AGG + chr6_4:36581199-36581218 Msa0987020:intron 25.0%
!!! GACCGTCAATATATTTTTAA+GGG + chr6_4:36581378-36581397 Msa0987020:intron 25.0%
!!! CTTTTAGAAATATCTAGAAC+TGG + chr6_4:36581489-36581508 Msa0987020:intron 25.0%
! GTGTACAATAATAGAATCTA+GGG - chr6_4:36581632-36581651 None:intergenic 25.0%
! TGTGTACAATAATAGAATCT+AGG - chr6_4:36581633-36581652 None:intergenic 25.0%
!! ACAAGTTAAAATTGCGATTT+TGG + chr6_4:36581688-36581707 Msa0987020:intron 25.0%
! GATCCCTACAAATTAAATAA+CGG + chr6_4:36581710-36581729 Msa0987020:intron 25.0%
! TGTAAAAAGGAGTAAAGATA+GGG - chr6_4:36581743-36581762 None:intergenic 25.0%
! TTGTAAAAAGGAGTAAAGAT+AGG - chr6_4:36581744-36581763 None:intergenic 25.0%
! GACAATGTATAATATATGCA+AGG + chr6_4:36582093-36582112 Msa0987020:intron 25.0%
! TATAATATATGCAAGGTATG+TGG + chr6_4:36582100-36582119 Msa0987020:intron 25.0%
!! CTTCATATGATAAGGAATTT+TGG - chr6_4:36582144-36582163 None:intergenic 25.0%
! TTAGTCATCTTCATATGATA+AGG - chr6_4:36582152-36582171 None:intergenic 25.0%
! TATAATACTCCATCAAACAT+AGG - chr6_4:36582394-36582413 None:intergenic 25.0%
! TATATGATTCAAGTATTAGG+GGG + chr6_4:36582410-36582429 Msa0987020:intron 25.0%
! TATAATACTCCATCAAACAT+AGG - chr6_4:36582394-36582413 None:intergenic 25.0%
! CAACAAGAATCAATTGTAAT+AGG + chr6_4:36582521-36582540 Msa0987020:intron 25.0%
! TCAAATAGTATCATCAACTA+TGG - chr6_4:36582916-36582935 None:intergenic 25.0%
!! TTAAAACCTTACTTTGAAAG+TGG + chr6_4:36583423-36583442 Msa0987020:CDS 25.0%
CTTGTAATCAACAGGATTAA+GGG - chr6_4:36579125-36579144 None:intergenic 30.0%
TCTTGTAATCAACAGGATTA+AGG - chr6_4:36579126-36579145 None:intergenic 30.0%
! TTAATCCTGTTGATTACAAG+AGG + chr6_4:36579125-36579144 Msa0987020:CDS 30.0%
TTTGTCATAACAACTCATGT+TGG + chr6_4:36579255-36579274 Msa0987020:intron 30.0%
TAAATTGAATTCTAGCCACT+AGG + chr6_4:36579345-36579364 Msa0987020:intron 30.0%
GAATCTCAACATACTCTTTA+AGG - chr6_4:36579869-36579888 None:intergenic 30.0%
AAACTTGATAGGACCTATAT+GGG - chr6_4:36579965-36579984 None:intergenic 30.0%
AAGTGAAGTGGTGAAATTTA+AGG + chr6_4:36580375-36580394 Msa0987020:CDS 30.0%
AAGGTTGGAGATGAAATATA+TGG + chr6_4:36580394-36580413 Msa0987020:CDS 30.0%
AATATATGGTGACATCAATG+AGG + chr6_4:36580408-36580427 Msa0987020:CDS 30.0%
CTTTCAAACCTAAAGATTCT+TGG + chr6_4:36580436-36580455 Msa0987020:CDS 30.0%
AATAGCTGAAGAGAGATTAT+TGG + chr6_4:36580477-36580496 Msa0987020:CDS 30.0%
! TTCTGGAGGAAATAGTTAAT+AGG - chr6_4:36580686-36580705 None:intergenic 30.0%
! TCACAACTTTGGAAAACTTA+GGG - chr6_4:36581228-36581247 None:intergenic 30.0%
! ATCACAACTTTGGAAAACTT+AGG - chr6_4:36581227-36581246 None:intergenic 30.0%
TGCATCAGAAAGTAAACTTA+GGG - chr6_4:36580854-36580873 None:intergenic 30.0%
TTGCATCAGAAAGTAAACTT+AGG - chr6_4:36580855-36580874 None:intergenic 30.0%
! TTTACTTTCCGTTGCAATTT+TGG - chr6_4:36581165-36581184 None:intergenic 30.0%
! GTTTTCCAAAGTTGTGATTT+TGG - chr6_4:36580798-36580817 None:intergenic 30.0%
! ATCACAACTTTGGAAAACTT+AGG + chr6_4:36581227-36581246 Msa0987020:intron 30.0%
! TCACAACTTTGGAAAACTTA+GGG + chr6_4:36581228-36581247 Msa0987020:intron 30.0%
CTCTCTCCGTAATAAAATAT+AGG - chr6_4:36581273-36581292 None:intergenic 30.0%
!! GGACCGTCAATATATTTTTA+AGG + chr6_4:36581377-36581396 Msa0987020:intron 30.0%
GGCCCTTAAAAATATATTGA+CGG - chr6_4:36581383-36581402 None:intergenic 30.0%
! TTTCTAAAAGTTAGTTACGG+CGG - chr6_4:36581479-36581498 None:intergenic 30.0%
GTAAAAAGGAGTAAAGATAG+GGG - chr6_4:36581742-36581761 None:intergenic 30.0%
ACAAATGTTACAAAGTTAGG+AGG + chr6_4:36581899-36581918 Msa0987020:intron 30.0%
! CATATGATAAGGAATTTTGG+TGG - chr6_4:36582141-36582160 None:intergenic 30.0%
TAGGTCAATAAACTTTAGAC+AGG - chr6_4:36582375-36582394 None:intergenic 30.0%
GTTTATTGACCTATGTTTGA+TGG + chr6_4:36582382-36582401 Msa0987020:intron 30.0%
GTTTATTGACCTATGTTTGA+TGG + chr6_4:36582382-36582401 Msa0987020:intron 30.0%
TAAAAAATTGGGGAGTGAAA+AGG + chr6_4:36582547-36582566 Msa0987020:intron 30.0%
TTCTCCTTTGTATAATCGAT+TGG - chr6_4:36582736-36582755 None:intergenic 30.0%
! ACACTACATCAAACTTTTCT+GGG - chr6_4:36582771-36582790 None:intergenic 30.0%
! TACACTACATCAAACTTTTC+TGG - chr6_4:36582772-36582791 None:intergenic 30.0%
AAGTTTGATGTAGTGTATGA+TGG + chr6_4:36582775-36582794 Msa0987020:CDS 30.0%
TGTGAATCGTAAATATGAGA+AGG - chr6_4:36582956-36582975 None:intergenic 30.0%
TCTCATATTTACGATTCACA+CGG + chr6_4:36582956-36582975 Msa0987020:intron 30.0%
! TTTTTATAAGTGGTCCATTG+TGG - chr6_4:36583106-36583125 None:intergenic 30.0%
TTCTACATTGTTGGACTATA+CGG + chr6_4:36583180-36583199 Msa0987020:intron 30.0%
AATTGACCACTTTCAAAGTA+AGG - chr6_4:36583432-36583451 None:intergenic 30.0%
TTCCAACTCATACAAAAGCT+TGG + chr6_4:36578993-36579012 Msa0987020:CDS 35.0%
! AACCAAGCTTTTGTATGAGT+TGG - chr6_4:36578998-36579017 None:intergenic 35.0%
GTTAACATACAGGTAGATGA+GGG - chr6_4:36579177-36579196 None:intergenic 35.0%
AGTTAACATACAGGTAGATG+AGG - chr6_4:36579178-36579197 None:intergenic 35.0%
TCATAACAACTCATGTTGGT+AGG + chr6_4:36579259-36579278 Msa0987020:intron 35.0%
GACAATGCACTATTATATGC+AGG + chr6_4:36579281-36579300 Msa0987020:intron 35.0%
!!! TTTTTTGTCAGATAGCCTAG+TGG - chr6_4:36579363-36579382 None:intergenic 35.0%
!! GGATATGTCTCTTAGTTTGT+TGG - chr6_4:36579629-36579648 None:intergenic 35.0%
AAGATCTTAGCTCAGTTAGT+AGG + chr6_4:36579651-36579670 Msa0987020:intron 35.0%
AGATCTTAGCTCAGTTAGTA+GGG + chr6_4:36579652-36579671 Msa0987020:intron 35.0%
! GTGAATTTTGTCACCCATAT+AGG + chr6_4:36579949-36579968 Msa0987020:intron 35.0%
CAAACTTGATAGGACCTATA+TGG - chr6_4:36579966-36579985 None:intergenic 35.0%
TGCTGGCATAGTAATTAAAG+TGG + chr6_4:36580351-36580370 Msa0987020:CDS 35.0%
GCTGGCATAGTAATTAAAGT+GGG + chr6_4:36580352-36580371 Msa0987020:CDS 35.0%
AATTAAAGTGGGAAGTGAAG+TGG + chr6_4:36580363-36580382 Msa0987020:CDS 35.0%
! GAAGTGGTGAAATTTAAGGT+TGG + chr6_4:36580379-36580398 Msa0987020:CDS 35.0%
! ACAAAGTGCCAAGAATCTTT+AGG - chr6_4:36580447-36580466 None:intergenic 35.0%
! ACAACTTTGGAAAACTTAGG+GGG - chr6_4:36581230-36581249 None:intergenic 35.0%
! CACAACTTTGGAAAACTTAG+GGG - chr6_4:36581229-36581248 None:intergenic 35.0%
CATCAGAAAGTAAACTTAGG+GGG - chr6_4:36580852-36580871 None:intergenic 35.0%
GCATCAGAAAGTAAACTTAG+GGG - chr6_4:36580853-36580872 None:intergenic 35.0%
GCGTTAACTGAGTCAAAATT+GGG - chr6_4:36580892-36580911 None:intergenic 35.0%
AGCGTTAACTGAGTCAAAAT+TGG - chr6_4:36580893-36580912 None:intergenic 35.0%
CAACGGAAAGTAAACTTAGA+GGG + chr6_4:36581171-36581190 Msa0987020:intron 35.0%
! CACAACTTTGGAAAACTTAG+GGG + chr6_4:36581229-36581248 Msa0987020:intron 35.0%
! ACAACTTTGGAAAACTTAGG+GGG + chr6_4:36581230-36581249 Msa0987020:intron 35.0%
TGGTATTTATAGCCCTTTGT+GGG - chr6_4:36581568-36581587 None:intergenic 35.0%
ACGAAGACCTTCATATGATA+TGG - chr6_4:36582052-36582071 None:intergenic 35.0%
!! TAAGGAATTTTGGTGGTTAC+CGG - chr6_4:36582134-36582153 None:intergenic 35.0%
ATTGATGAAAAATGTTCCGG+AGG + chr6_4:36582229-36582248 Msa0987020:intron 35.0%
AGGACTTCAGATACAATACA+GGG + chr6_4:36582249-36582268 Msa0987020:intron 35.0%
GTCAATAAACTTTAGACAGG+TGG - chr6_4:36582372-36582391 None:intergenic 35.0%
! GGAGTGAAAAGGATGTTTTA+AGG + chr6_4:36582558-36582577 Msa0987020:intron 35.0%
CTGAAAATTAGCACACATTG+AGG + chr6_4:36582588-36582607 Msa0987020:intron 35.0%
AGATGCACCATAAACATGTT+TGG - chr6_4:36582650-36582669 None:intergenic 35.0%
! CTGGAAAAATCGAGTTTTTG+AGG + chr6_4:36582692-36582711 Msa0987020:CDS 35.0%
!! AATCGAGTTTTTGAGGAAGT+TGG + chr6_4:36582699-36582718 Msa0987020:CDS 35.0%
!! ATCGAGTTTTTGAGGAAGTT+GGG + chr6_4:36582700-36582719 Msa0987020:CDS 35.0%
CTTGCCAATCGATTATACAA+AGG + chr6_4:36582729-36582748 Msa0987020:CDS 35.0%
ATCTCTACAGACAAGTTCTT+TGG + chr6_4:36582830-36582849 Msa0987020:intron 35.0%
!! TGGTGGATCATTTTCATAAG+TGG + chr6_4:36582850-36582869 Msa0987020:intron 35.0%
! TTTTCATAAGTGGTCACTTG+TGG + chr6_4:36582860-36582879 Msa0987020:intron 35.0%
! ACATCACATAGTATCGAAGA+TGG - chr6_4:36583279-36583298 None:intergenic 35.0%
TCTTCGATACTATGTGATGT+AGG + chr6_4:36583279-36583298 Msa0987020:intron 35.0%
CTTCGATACTATGTGATGTA+GGG + chr6_4:36583280-36583299 Msa0987020:intron 35.0%
TTCGATACTATGTGATGTAG+GGG + chr6_4:36583281-36583300 Msa0987020:intron 35.0%
TTCTTTGTGCTCACTTCTAA+AGG + chr6_4:36583384-36583403 Msa0987020:CDS 35.0%
AAAATGGTATAGGAGTCTTG+GGG - chr6_4:36583470-36583489 None:intergenic 35.0%
GAAAATGGTATAGGAGTCTT+GGG - chr6_4:36583471-36583490 None:intergenic 35.0%
TGAAAATGGTATAGGAGTCT+TGG - chr6_4:36583472-36583491 None:intergenic 35.0%
TTCAAGAGCTACTGGAAAAT+TGG + chr6_4:36583524-36583543 Msa0987020:CDS 35.0%
TGCATCCTCTTGTAATCAAC+AGG - chr6_4:36579133-36579152 None:intergenic 40.0%
GCACTATTATATGCAGGAGT+CGG + chr6_4:36579287-36579306 Msa0987020:intron 40.0%
CACTATTATATGCAGGAGTC+GGG + chr6_4:36579288-36579307 Msa0987020:intron 40.0%
ACTATTATATGCAGGAGTCG+GGG + chr6_4:36579289-36579308 Msa0987020:intron 40.0%
CTAACTGAGCTAAGATCTTG+TGG - chr6_4:36579650-36579669 None:intergenic 40.0%
CAGCTCTTAAGGTGAATAAG+TGG - chr6_4:36579724-36579743 None:intergenic 40.0%
ACAAAATTCACCCTCAAGAG+AGG - chr6_4:36579940-36579959 None:intergenic 40.0%
TTGTGTGAGAAGATTGTACC+AGG + chr6_4:36580319-36580338 Msa0987020:intron 40.0%
TATGGTGACATCAATGAGGA+AGG + chr6_4:36580412-36580431 Msa0987020:CDS 40.0%
TGCTAGCATTCCTTTAGCTA+TGG + chr6_4:36580534-36580553 Msa0987020:CDS 40.0%
TAAGCTGTCTCCATAGCTAA+AGG - chr6_4:36580547-36580566 None:intergenic 40.0%
TGGCAAATCAATCCTTGTCT+TGG + chr6_4:36580597-36580616 Msa0987020:CDS 40.0%
GGCAAATCAATCCTTGTCTT+GGG + chr6_4:36580598-36580617 Msa0987020:CDS 40.0%
AAATCAATCCTTGTCTTGGG+AGG + chr6_4:36580601-36580620 Msa0987020:CDS 40.0%
!! AGTTGGAAGCTTTGCTATTC+AGG + chr6_4:36580633-36580652 Msa0987020:CDS 40.0%
GAGGGCTAAAATCACAACTT+TGG - chr6_4:36580806-36580825 None:intergenic 40.0%
ACTGAGTCAAAATTGGGCTA+GGG - chr6_4:36580886-36580905 None:intergenic 40.0%
AACTGAGTCAAAATTGGGCT+AGG - chr6_4:36580887-36580906 None:intergenic 40.0%
GCAACGGAAAGTAAACTTAG+AGG + chr6_4:36581170-36581189 Msa0987020:intron 40.0%
! AGCCTTTCTATAGGGCTTTT+AGG - chr6_4:36581404-36581423 None:intergenic 40.0%
AAAGCCCTATAGAAAGGCTT+AGG + chr6_4:36581405-36581424 Msa0987020:intron 40.0%
GTGGTATTTATAGCCCTTTG+TGG - chr6_4:36581569-36581588 None:intergenic 40.0%
AGGGCTATAAATACCACTCT+TGG + chr6_4:36581572-36581591 Msa0987020:intron 40.0%
GGGCTATAAATACCACTCTT+GGG + chr6_4:36581573-36581592 Msa0987020:intron 40.0%
! TGAGATTAGCTCAGTTGGTA+GGG + chr6_4:36582071-36582090 Msa0987020:intron 40.0%
!! AAGGAATTTTGGTGGTTACC+GGG - chr6_4:36582133-36582152 None:intergenic 40.0%
! GTATTGTATCTGAAGTCCTC+CGG - chr6_4:36582248-36582267 None:intergenic 40.0%
GAGGACTTCAGATACAATAC+AGG + chr6_4:36582248-36582267 Msa0987020:intron 40.0%
GGACTTCAGATACAATACAG+GGG + chr6_4:36582250-36582269 Msa0987020:intron 40.0%
GACTTCAGATACAATACAGG+GGG + chr6_4:36582251-36582270 Msa0987020:intron 40.0%
TTCCTCTAACCAGACCTTAT+TGG + chr6_4:36582277-36582296 Msa0987020:intron 40.0%
TCCTCTAACCAGACCTTATT+GGG + chr6_4:36582278-36582297 Msa0987020:intron 40.0%
TGCTATTAGTGAGCCCAATA+AGG - chr6_4:36582294-36582313 None:intergenic 40.0%
TGGGCTCACTAATAGCATAT+TGG + chr6_4:36582297-36582316 Msa0987020:intron 40.0%
GGGCTCACTAATAGCATATT+GGG + chr6_4:36582298-36582317 Msa0987020:intron 40.0%
TTTAGTCATGTGGGTAGGAA+AGG - chr6_4:36582347-36582366 None:intergenic 40.0%
TTTCCTACCCACATGACTAA+AGG + chr6_4:36582346-36582365 Msa0987020:intron 40.0%
CAGCTTGCCAAACATGTTTA+TGG + chr6_4:36582640-36582659 Msa0987020:intron 40.0%
! GATGTAGTGTATGATGGAGT+AGG + chr6_4:36582781-36582800 Msa0987020:CDS 40.0%
TCTACAGACAAGTTCTTTGG+TGG + chr6_4:36582833-36582852 Msa0987020:intron 40.0%
! CACATAGTATCGAAGATGGA+TGG - chr6_4:36583275-36583294 None:intergenic 40.0%
!! TGATGTAGGGGAAGTTGATA+GGG + chr6_4:36583293-36583312 Msa0987020:intron 40.0%
TAGGGCTATGAAGGCAATTA+AGG + chr6_4:36583311-36583330 Msa0987020:CDS 40.0%
GCTATGAAGGCAATTAAGGA+AGG + chr6_4:36583315-36583334 Msa0987020:CDS 40.0%
ATGAAGGCAATTAAGGAAGG+TGG + chr6_4:36583318-36583337 Msa0987020:CDS 40.0%
GTGAGCACAAAGAAAATAGC+CGG - chr6_4:36583378-36583397 None:intergenic 40.0%
ACGACGTCTGAAAATGGTAT+AGG - chr6_4:36583480-36583499 None:intergenic 40.0%
AGCTCTTGAAGTCTCTAAGT+AGG - chr6_4:36583514-36583533 None:intergenic 40.0%
TTAGAGACTTCAAGAGCTAC+TGG + chr6_4:36583516-36583535 Msa0987020:CDS 40.0%
!! GCTTGGTTCTACTCTGAACA+TGG + chr6_4:36579010-36579029 Msa0987020:CDS 45.0%
! AGTGGAGGTATGGACCAATT+TGG - chr6_4:36579064-36579083 None:intergenic 45.0%
GTCATCTTTGAGTGGAGGTA+TGG - chr6_4:36579074-36579093 None:intergenic 45.0%
ACTTGGTCATCTTTGAGTGG+AGG - chr6_4:36579079-36579098 None:intergenic 45.0%
! AGGACTTGGTCATCTTTGAG+TGG - chr6_4:36579082-36579101 None:intergenic 45.0%
AGATGACCAAGTCCTCATCA+AGG + chr6_4:36579087-36579106 Msa0987020:CDS 45.0%
CAACAACCTTGATGAGGACT+TGG - chr6_4:36579096-36579115 None:intergenic 45.0%
AAGCAGCAACAACCTTGATG+AGG - chr6_4:36579102-36579121 None:intergenic 45.0%
! GAGGATGCATGCCTTATTCA+AGG + chr6_4:36579144-36579163 Msa0987020:CDS 45.0%
AGGGTCAGTGTCCTTGAATA+AGG - chr6_4:36579158-36579177 None:intergenic 45.0%
! GTGAATAAGTGGAGTGTCTG+AGG - chr6_4:36579713-36579732 None:intergenic 45.0%
GCTATGGAGACAGCTTATGA+AGG + chr6_4:36580550-36580569 Msa0987020:CDS 45.0%
! TGAGTCAAAATTGGGCTAGG+GGG - chr6_4:36580884-36580903 None:intergenic 45.0%
! CTGAGTCAAAATTGGGCTAG+GGG - chr6_4:36580885-36580904 None:intergenic 45.0%
GAAAGTAAACTTAGAGGGCC+TGG + chr6_4:36581176-36581195 Msa0987020:intron 45.0%
GGAGGCCAAAATCACAACTT+TGG + chr6_4:36581217-36581236 Msa0987020:intron 45.0%
GGCCTAAAAGCCCTATAGAA+AGG + chr6_4:36581399-36581418 Msa0987020:intron 45.0%
! CTTCGTGAGATTAGCTCAGT+TGG + chr6_4:36582066-36582085 Msa0987020:intron 45.0%
! GTGAGATTAGCTCAGTTGGT+AGG + chr6_4:36582070-36582089 Msa0987020:intron 45.0%
AAGGTATGTGGTTCAAACCC+CGG + chr6_4:36582112-36582131 Msa0987020:intron 45.0%
!! AGGAATTTTGGTGGTTACCG+GGG - chr6_4:36582132-36582151 None:intergenic 45.0%
TTAGTGAGCCCAATAAGGTC+TGG - chr6_4:36582289-36582308 None:intergenic 45.0%
ATAGCAGCAACTTCAAGCAC+TGG + chr6_4:36582673-36582692 Msa0987020:CDS 45.0%
! GTATCGAAGATGGATGGACT+TGG - chr6_4:36583269-36583288 None:intergenic 45.0%
! GTGATGTAGGGGAAGTTGAT+AGG + chr6_4:36583292-36583311 Msa0987020:intron 45.0%
!! GGAAGTTGATAGGGCTATGA+AGG + chr6_4:36583302-36583321 Msa0987020:CDS 45.0%
GTTGTGACAATAGTACCTCC+TGG + chr6_4:36583345-36583364 Msa0987020:CDS 45.0%
AGCACAAAGAAAATAGCCGG+TGG - chr6_4:36583375-36583394 None:intergenic 45.0%
GCTTCAACGACGTCTGAAAA+TGG - chr6_4:36583486-36583505 None:intergenic 45.0%
!!! TTTTTTTTTTTTTTATGAAT+CGG - chr6_4:36580023-36580042 None:intergenic 5.0%
! AGGTGAATAAGTGGGGTGTC+CGG - chr6_4:36579323-36579342 None:intergenic 50.0%
! GTACCAGGCTTTGATGTTGC+TGG + chr6_4:36580334-36580353 Msa0987020:CDS 50.0%
ATGCCAGCAACATCAAAGCC+TGG - chr6_4:36580340-36580359 None:intergenic 50.0%
TGACTCAGTTAACGCTGACG+TGG + chr6_4:36580897-36580916 Msa0987020:intron 50.0%
TCCGTTGACCGGGTCAAAAT+TGG + chr6_4:36581129-36581148 Msa0987020:intron 50.0%
!! GCCAATTTTGACCCGGTCAA+CGG - chr6_4:36581133-36581152 None:intergenic 50.0%
TGGGGGGACCAAAATTGCAA+CGG + chr6_4:36581154-36581173 Msa0987020:intron 50.0%
GGCGCCTAAGCCTTTCTATA+GGG - chr6_4:36581412-36581431 None:intergenic 50.0%
!! GCTTTAGGAGCCCTTCTAGA+GGG - chr6_4:36581433-36581452 None:intergenic 50.0%
TAGAAGGGCTCCTAAAGCCT+AGG + chr6_4:36581435-36581454 Msa0987020:intron 50.0%
! ACCTACAACCCAGCTTGCTT+GGG + chr6_4:36581520-36581539 Msa0987020:intron 50.0%
ACTTAAGCCCCAAGCAAGCT+GGG - chr6_4:36581531-36581550 None:intergenic 50.0%
TACTTAAGCCCCAAGCAAGC+TGG - chr6_4:36581532-36581551 None:intergenic 50.0%
ACGCTAACACAAGCCCACAA+AGG + chr6_4:36581552-36581571 Msa0987020:intron 50.0%
CGCTAACACAAGCCCACAAA+GGG + chr6_4:36581553-36581572 Msa0987020:intron 50.0%
CTTGCGAATGATCCCAAGAG+TGG - chr6_4:36581588-36581607 None:intergenic 50.0%
GCCCAATAAGGTCTGGTTAG+AGG - chr6_4:36582282-36582301 None:intergenic 50.0%
AAGGCAATGAGGCTGCACAT+AGG - chr6_4:36582328-36582347 None:intergenic 50.0%
TGTGGGTAGGAAAGGCAATG+AGG - chr6_4:36582339-36582358 None:intergenic 50.0%
TGGCCTTTAGTCATGTGGGT+AGG - chr6_4:36582352-36582371 None:intergenic 50.0%
CAGGTGGCCTTTAGTCATGT+GGG - chr6_4:36582356-36582375 None:intergenic 50.0%
ACAGGTGGCCTTTAGTCATG+TGG - chr6_4:36582357-36582376 None:intergenic 50.0%
CACGGTGACTTAATCGATGC+CGG + chr6_4:36582974-36582993 Msa0987020:intron 50.0%
AAAATAGCCGGTGGACATCC+AGG - chr6_4:36583366-36583385 None:intergenic 50.0%
! GTGAATAAGTGGGGTGTCCG+GGG - chr6_4:36579321-36579340 None:intergenic 55.0%
! GGTGAATAAGTGGGGTGTCC+GGG - chr6_4:36579322-36579341 None:intergenic 55.0%
GAGAGAGCTGAGCTTTCTGC+TGG + chr6_4:36580577-36580596 Msa0987020:CDS 55.0%
! ATCCTTGTCTTGGGAGGTGC+TGG + chr6_4:36580607-36580626 Msa0987020:CDS 55.0%
TGACCGGGTCAAAATTGGCG+TGG + chr6_4:36581134-36581153 Msa0987020:intron 55.0%
GACCGGGTCAAAATTGGCGT+GGG + chr6_4:36581135-36581154 Msa0987020:intron 55.0%
ACCGGGTCAAAATTGGCGTG+GGG + chr6_4:36581136-36581155 Msa0987020:intron 55.0%
GGGCGCCTAAGCCTTTCTAT+AGG - chr6_4:36581413-36581432 None:intergenic 55.0%
!! GGCTTTAGGAGCCCTTCTAG+AGG - chr6_4:36581434-36581453 None:intergenic 55.0%
! GACCTACAACCCAGCTTGCT+TGG + chr6_4:36581519-36581538 Msa0987020:intron 55.0%
! CCTACAACCCAGCTTGCTTG+GGG + chr6_4:36581521-36581540 Msa0987020:intron 55.0%
!! CGCATGAGTGAGCACTGACT+TGG - chr6_4:36581781-36581800 None:intergenic 55.0%
CAATGAGGCTGCACATAGGC+TGG - chr6_4:36582324-36582343 None:intergenic 55.0%
AGTACCTCCTGGATGTCCAC+CGG + chr6_4:36583356-36583375 Msa0987020:CDS 55.0%
GGAGTCTTGGGGTCAAGTCT+TGG - chr6_4:36583459-36583478 None:intergenic 55.0%
CACCAGCACCTCCCAAGACA+AGG - chr6_4:36580612-36580631 None:intergenic 60.0%
!! CTTGTCTTGGGAGGTGCTGG+TGG + chr6_4:36580610-36580629 Msa0987020:CDS 60.0%
!! TTGGGAGGTGCTGGTGGAGT+TGG + chr6_4:36580616-36580635 Msa0987020:CDS 60.0%
!! CCCCCACGCCAATTTTGACC+CGG - chr6_4:36581140-36581159 None:intergenic 60.0%
CCGGGTCAAAATTGGCGTGG+GGG + chr6_4:36581137-36581156 Msa0987020:intron 60.0%
CGGGTCAAAATTGGCGTGGG+GGG + chr6_4:36581138-36581157 Msa0987020:intron 60.0%
AGGCTTAGGCGCCCTCTAGA+AGG + chr6_4:36581419-36581438 Msa0987020:intron 60.0%
! GGCTTAGGCGCCCTCTAGAA+GGG + chr6_4:36581420-36581439 Msa0987020:intron 60.0%
! TTACGGCGGCACCTCTGGAA+GGG - chr6_4:36581465-36581484 None:intergenic 60.0%
GTTAGTTACGGCGGCACCTC+TGG - chr6_4:36581470-36581489 None:intergenic 60.0%
CCCCAAGCAAGCTGGGTTGT+AGG - chr6_4:36581524-36581543 None:intergenic 60.0%
ATAGCCGGTGGACATCCAGG+AGG - chr6_4:36583363-36583382 None:intergenic 60.0%
AGGAGTCGGGGTTCGAACCC+CGG + chr6_4:36579301-36579320 Msa0987020:intron 65.0%
GTGCCCACGTGTCCGTTGAC+CGG + chr6_4:36581118-36581137 Msa0987020:intron 65.0%
TGCCCACGTGTCCGTTGACC+GGG + chr6_4:36581119-36581138 Msa0987020:intron 65.0%
GACCCGGTCAACGGACACGT+GGG - chr6_4:36581124-36581143 None:intergenic 65.0%
TGACCCGGTCAACGGACACG+TGG - chr6_4:36581125-36581144 None:intergenic 65.0%
! GAAGGGCGCGCCTAGGCTTT+AGG - chr6_4:36581448-36581467 None:intergenic 65.0%
GTTACGGCGGCACCTCTGGA+AGG - chr6_4:36581466-36581485 None:intergenic 65.0%
! ACCTCTGGAAGGGCGCGCCT+AGG - chr6_4:36581455-36581474 None:intergenic 70.0%
GCCTAGGCGCGCCCTTCCAG+AGG + chr6_4:36581451-36581470 Msa0987020:intron 75.0%
Chromosome Type Strat End Strand Name
chr6_4 gene 36578950 36583566 36578950 ID=Msa0987020;Name=Msa0987020
chr6_4 mRNA 36578950 36583566 36578950 ID=Msa0987020-mRNA-1;Parent=Msa0987020;Name=Msa0987020-mRNA-1;_AED=0.09;_eAED=0.09;_QI=0|0|0|1|1|1|4|0|328
chr6_4 exon 36578950 36579186 36578950 ID=Msa0987020-mRNA-1:exon:9209;Parent=Msa0987020-mRNA-1
chr6_4 exon 36580331 36580654 36580331 ID=Msa0987020-mRNA-1:exon:9210;Parent=Msa0987020-mRNA-1
chr6_4 exon 36582643 36582802 36582643 ID=Msa0987020-mRNA-1:exon:9211;Parent=Msa0987020-mRNA-1
chr6_4 exon 36583301 36583566 36583301 ID=Msa0987020-mRNA-1:exon:9212;Parent=Msa0987020-mRNA-1
chr6_4 CDS 36578950 36579186 36578950 ID=Msa0987020-mRNA-1:cds;Parent=Msa0987020-mRNA-1
chr6_4 CDS 36580331 36580654 36580331 ID=Msa0987020-mRNA-1:cds;Parent=Msa0987020-mRNA-1
chr6_4 CDS 36582643 36582802 36582643 ID=Msa0987020-mRNA-1:cds;Parent=Msa0987020-mRNA-1
chr6_4 CDS 36583301 36583566 36583301 ID=Msa0987020-mRNA-1:cds;Parent=Msa0987020-mRNA-1
Gene Sequence

>Msa0987020

ATGGCAACAGAAATTTCAAGCACTGATCCTACTAATATTACTATTCCAACTCATACAAAAGCTTGGTTCTACTCTGAACATGGAAAGCCATTAGATATTCTAAAGTTACATCCAAATTGGTCCATACCTCCACTCAAAGATGACCAAGTCCTCATCAAGGTTGTTGCTGCTTCCCTTAATCCTGTTGATTACAAGAGGATGCATGCCTTATTCAAGGACACTGACCCTCATCTACCTATTGTACCAGGCTTTGATGTTGCTGGCATAGTAATTAAAGTGGGAAGTGAAGTGGTGAAATTTAAGGTTGGAGATGAAATATATGGTGACATCAATGAGGAAGGACTTTCAAACCTAAAGATTCTTGGCACTTTGTCAGAGTATACAATAGCTGAAGAGAGATTATTGGCTCATAAGCCAAAAAATCTAAGCTTCATTGAAGCTGCTAGCATTCCTTTAGCTATGGAGACAGCTTATGAAGGACTTGAGAGAGCTGAGCTTTCTGCTGGCAAATCAATCCTTGTCTTGGGAGGTGCTGGTGGAGTTGGAAGCTTTGCTATTCAGCTTGCCAAACATGTTTATGGTGCATCTAAGATAGCAGCAACTTCAAGCACTGGAAAAATCGAGTTTTTGAGGAAGTTGGGAGTTGACTTGCCAATCGATTATACAAAGGAGAACTTTGAAGATCTCCCAGAAAAGTTTGATGTAGTGTATGATGGAGTAGGGGAAGTTGATAGGGCTATGAAGGCAATTAAGGAAGGTGGCAAAGTTGTGACAATAGTACCTCCTGGATGTCCACCGGCTATTTTCTTTGTGCTCACTTCTAAAGGATCTATCTTAGAGAAGTTAAAACCTTACTTTGAAAGTGGTCAATTGAAGCCAAGACTTGACCCCAAGACTCCTATACCATTTTCAGACGTCGTTGAAGCTTTTTCCTACTTAGAGACTTCAAGAGCTACTGGAAAATTGGTCATTTATCCCATTACATGA

Protein sequence

>Msa0987020

MATEISSTDPTNITIPTHTKAWFYSEHGKPLDILKLHPNWSIPPLKDDQVLIKVVAASLNPVDYKRMHALFKDTDPHLPIVPGFDVAGIVIKVGSEVVKFKVGDEIYGDINEEGLSNLKILGTLSEYTIAEERLLAHKPKNLSFIEAASIPLAMETAYEGLERAELSAGKSILVLGGAGGVGSFAIQLAKHVYGASKIAATSSTGKIEFLRKLGVDLPIDYTKENFEDLPEKFDVVYDGVGEVDRAMKAIKEGGKVVTIVPPGCPPAIFFVLTSKGSILEKLKPYFESGQLKPRLDPKTPIPFSDVVEAFSYLETSRATGKLVIYPIT*