Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0922380 | XP_004513331.1 | 83.125 | 320 | 51 | 1 | 1 | 317 | 1 | 320 | 0.0 | 547 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0922380 | sp|A0A2P1GIY9|REDX2_CATRO | 57.632 | 321 | 131 | 2 | 2 | 317 | 3 | 323 | 5.65e-135 | 389 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0742370 | Msa0922380 | -0.800160 | 1.641706e-48 | -8.615850e-47 |
| Msa0862480 | Msa0922380 | -0.802894 | 4.518079e-49 | -8.615850e-47 |
| Msa0922380 | Msa0961260 | 0.833041 | 6.696944e-56 | -8.615850e-47 |
| Msa0922380 | Msa1323070 | 0.808356 | 3.223734e-50 | -8.615850e-47 |
| Msa0922380 | Msa1422860 | 0.810079 | 1.377385e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0922380 | MtrunA17_Chr6g0479981 | 66.667 | 318 | 101 | 2 | 1 | 314 | 1 | 317 | 1.07e-159 | 448 |
| Msa0922380 | MtrunA17_Chr6g0480011 | 58.385 | 322 | 129 | 1 | 1 | 317 | 1 | 322 | 7.36e-138 | 393 |
| Msa0922380 | MtrunA17_Chr6g0480021 | 56.250 | 320 | 118 | 2 | 1 | 316 | 1 | 302 | 1.15e-124 | 358 |
| Msa0922380 | MtrunA17_Chr1g0173621 | 52.632 | 323 | 138 | 3 | 1 | 316 | 1 | 315 | 7.75e-114 | 332 |
| Msa0922380 | MtrunA17_Chr3g0121001 | 51.724 | 319 | 136 | 7 | 6 | 316 | 7 | 315 | 4.32e-102 | 302 |
| Msa0922380 | MtrunA17_Chr5g0447941 | 51.420 | 317 | 135 | 8 | 6 | 314 | 6 | 311 | 1.88e-87 | 265 |
| Msa0922380 | MtrunA17_Chr5g0447951 | 52.721 | 294 | 129 | 5 | 6 | 292 | 6 | 296 | 2.19e-87 | 264 |
| Msa0922380 | MtrunA17_Chr5g0447961 | 52.721 | 294 | 129 | 5 | 6 | 292 | 6 | 296 | 2.19e-87 | 264 |
| Msa0922380 | MtrunA17_Chr4g0018921 | 44.201 | 319 | 161 | 7 | 8 | 317 | 5 | 315 | 1.19e-85 | 260 |
| Msa0922380 | MtrunA17_Chr4g0036261 | 64.674 | 184 | 65 | 0 | 134 | 317 | 1 | 184 | 5.58e-84 | 251 |
| Msa0922380 | MtrunA17_Chr8g0368921 | 39.441 | 322 | 182 | 6 | 4 | 317 | 3 | 319 | 9.37e-75 | 232 |
| Msa0922380 | MtrunA17_Chr4g0036301 | 62.573 | 171 | 64 | 0 | 146 | 316 | 1 | 171 | 8.24e-74 | 224 |
| Msa0922380 | MtrunA17_Chr8g0368931 | 40.064 | 312 | 176 | 6 | 11 | 317 | 10 | 315 | 4.41e-72 | 225 |
| Msa0922380 | MtrunA17_Chr4g0036321 | 61.404 | 171 | 66 | 0 | 146 | 316 | 1 | 171 | 2.01e-70 | 216 |
| Msa0922380 | MtrunA17_Chr7g0239701 | 40.514 | 311 | 175 | 6 | 11 | 317 | 14 | 318 | 5.28e-68 | 215 |
| Msa0922380 | MtrunA17_Chr4g0009531 | 40.968 | 310 | 174 | 6 | 11 | 317 | 10 | 313 | 2.67e-66 | 210 |
| Msa0922380 | MtrunA17_Chr4g0009581 | 40.717 | 307 | 168 | 5 | 11 | 316 | 11 | 304 | 6.58e-64 | 204 |
| Msa0922380 | MtrunA17_Chr7g0243551 | 38.298 | 282 | 163 | 4 | 13 | 291 | 19 | 292 | 7.18e-59 | 191 |
| Msa0922380 | MtrunA17_Chr4g0009621 | 43.460 | 237 | 124 | 3 | 81 | 316 | 1 | 228 | 3.29e-51 | 169 |
| Msa0922380 | MtrunA17_Chr4g0036051 | 37.374 | 297 | 164 | 8 | 9 | 290 | 3 | 292 | 5.57e-50 | 168 |
| Msa0922380 | MtrunA17_Chr4g0036311 | 57.009 | 107 | 46 | 0 | 1 | 107 | 1 | 107 | 2.23e-40 | 137 |
| Msa0922380 | MtrunA17_Chr4g0036291 | 57.009 | 107 | 46 | 0 | 1 | 107 | 1 | 107 | 6.27e-40 | 135 |
| Msa0922380 | MtrunA17_Chr6g0479811 | 57.273 | 110 | 47 | 0 | 186 | 295 | 1 | 110 | 1.79e-39 | 134 |
| Msa0922380 | MtrunA17_Chr4g0036251 | 56.075 | 107 | 41 | 2 | 1 | 107 | 1 | 101 | 4.84e-37 | 128 |
| Msa0922380 | MtrunA17_Chr6g0479791 | 55.814 | 86 | 36 | 1 | 233 | 316 | 18 | 103 | 7.00e-25 | 96.7 |
| Msa0922380 | MtrunA17_Chr3g0127491 | 25.168 | 298 | 170 | 10 | 32 | 291 | 69 | 351 | 8.60e-17 | 80.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0922380 | AT1G59960.1 | 48.466 | 326 | 159 | 3 | 1 | 317 | 1 | 326 | 3.42e-107 | 315 |
| Msa0922380 | AT1G59950.1 | 49.032 | 310 | 149 | 4 | 15 | 317 | 13 | 320 | 1.58e-94 | 283 |
| Msa0922380 | AT2G37790.1 | 44.051 | 311 | 164 | 4 | 11 | 317 | 10 | 314 | 1.31e-85 | 260 |
| Msa0922380 | AT5G62420.1 | 43.354 | 316 | 163 | 6 | 11 | 317 | 8 | 316 | 2.64e-85 | 259 |
| Msa0922380 | AT2G37770.2 | 42.405 | 316 | 163 | 7 | 11 | 317 | 10 | 315 | 1.23e-80 | 248 |
| Msa0922380 | AT2G37760.2 | 40.000 | 315 | 168 | 5 | 11 | 317 | 10 | 311 | 1.31e-77 | 239 |
| Msa0922380 | AT2G37760.1 | 40.000 | 315 | 168 | 5 | 11 | 317 | 10 | 311 | 1.31e-77 | 239 |
| Msa0922380 | AT3G53880.1 | 41.935 | 310 | 173 | 4 | 11 | 317 | 10 | 315 | 4.53e-77 | 238 |
| Msa0922380 | AT5G01670.1 | 39.103 | 312 | 176 | 6 | 11 | 316 | 18 | 321 | 4.32e-72 | 226 |
| Msa0922380 | AT3G53880.2 | 40.203 | 296 | 168 | 4 | 11 | 301 | 10 | 301 | 2.53e-68 | 216 |
| Msa0922380 | AT2G37760.5 | 39.041 | 292 | 158 | 4 | 11 | 295 | 10 | 288 | 2.94e-68 | 215 |
| Msa0922380 | AT2G37760.4 | 38.754 | 289 | 157 | 4 | 11 | 292 | 10 | 285 | 1.61e-67 | 213 |
| Msa0922380 | AT2G37760.3 | 38.754 | 289 | 157 | 4 | 11 | 292 | 10 | 285 | 1.61e-67 | 213 |
| Msa0922380 | AT5G01670.2 | 35.988 | 339 | 176 | 7 | 11 | 316 | 18 | 348 | 4.69e-66 | 211 |
| Msa0922380 | AT2G37760.6 | 40.226 | 266 | 145 | 4 | 60 | 317 | 6 | 265 | 2.79e-64 | 204 |
| Msa0922380 | AT2G37760.7 | 40.226 | 266 | 145 | 4 | 60 | 317 | 6 | 265 | 2.79e-64 | 204 |
| Msa0922380 | AT2G21250.1 | 38.127 | 299 | 163 | 8 | 8 | 291 | 2 | 293 | 7.38e-63 | 202 |
| Msa0922380 | AT2G21260.1 | 37.919 | 298 | 163 | 8 | 8 | 290 | 2 | 292 | 1.60e-62 | 201 |
| Msa0922380 | AT2G37770.1 | 42.308 | 208 | 108 | 5 | 5 | 207 | 4 | 204 | 2.80e-49 | 166 |
| Msa0922380 | AT2G21250.2 | 39.331 | 239 | 123 | 8 | 8 | 231 | 2 | 233 | 3.55e-47 | 159 |
| Msa0922380 | AT2G21260.2 | 35.909 | 220 | 123 | 6 | 86 | 290 | 8 | 224 | 1.52e-39 | 139 |
| Msa0922380 | AT5G53580.1 | 22.981 | 322 | 179 | 12 | 32 | 313 | 70 | 362 | 8.23e-16 | 77.8 |
Find 102 sgRNAs with CRISPR-Local
Find 185 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTCAATCAAATTTGGAATT+TGG | 0.111782 | 6_2:+60721616 | None:intergenic |
| TCTATTGGTGTGAGCAATTT+TGG | 0.128778 | 6_2:-60722998 | Msa0922380:CDS |
| AATGCAATTTCAATCAAATT+TGG | 0.149248 | 6_2:+60721609 | None:intergenic |
| AAAATCTTCAGATATTTAAT+TGG | 0.200969 | 6_2:-60721786 | Msa0922380:CDS |
| TCATGTGTATTCTTCTTTCT+TGG | 0.214111 | 6_2:+60722662 | None:intergenic |
| GTTTCAATCTCACTGGAAAA+TGG | 0.223686 | 6_2:+60723113 | None:intergenic |
| ACTCCTTTGGCCTCATTTCC+AGG | 0.239428 | 6_2:+60723091 | None:intergenic |
| ACAAAACCTTGGAAGATCTT+TGG | 0.245147 | 6_2:-60721672 | Msa0922380:CDS |
| AGCGAGTCCTGAACAACTTT+TGG | 0.247044 | 6_2:+60724244 | None:intergenic |
| GACTCGCTCAAAACAGGTTC+TGG | 0.251049 | 6_2:-60724229 | Msa0922380:five_prime_UTR |
| TGGGAGCTAATGGTGCTTCA+TGG | 0.271882 | 6_2:-60722624 | Msa0922380:CDS |
| CAAAACCTTGGAAGATCTTT+GGG | 0.277871 | 6_2:-60721671 | Msa0922380:CDS |
| TCTCATAACTGCTTATAAAA+AGG | 0.278612 | 6_2:+60721540 | None:intergenic |
| ATGGGGTACCCTTGCTGTTA+TGG | 0.280682 | 6_2:-60722605 | Msa0922380:CDS |
| TTGTAATTGCAATATCCTTT+AGG | 0.286800 | 6_2:+60722572 | None:intergenic |
| TGCAGTGAGTTCTTGATTGC+CGG | 0.294986 | 6_2:+60723340 | None:intergenic |
| CCAGAGTTTAGCACCACTTC+TGG | 0.309771 | 6_2:+60723616 | None:intergenic |
| CCTGCAAGGTCGTTGACTTC+TGG | 0.321591 | 6_2:-60724193 | Msa0922380:intron |
| GATTGCATTGAGATGGATAT+TGG | 0.324308 | 6_2:-60721860 | Msa0922380:CDS |
| AGCTTATCCAAAAGTTGTTC+AGG | 0.347127 | 6_2:-60724251 | Msa0922380:five_prime_UTR |
| TATTCCACCGGCTGTTAATC+AGG | 0.360558 | 6_2:-60722939 | Msa0922380:intron |
| GGGAGCTAATGGTGCTTCAT+GGG | 0.382705 | 6_2:-60722623 | Msa0922380:CDS |
| CCAGAAGTCAACGACCTTGC+AGG | 0.385666 | 6_2:+60724193 | None:intergenic |
| CATGAGTGCATGGTCCCCTT+TGG | 0.389739 | 6_2:-60722644 | Msa0922380:CDS |
| ACAATGCCTATGCTTTCGTT+TGG | 0.405538 | 6_2:-60723589 | Msa0922380:CDS |
| CGAAATGACGGTAGCCGACT+TGG | 0.406767 | 6_2:+60723506 | None:intergenic |
| TGGTCCCCTTTGGGAGCTAA+TGG | 0.408524 | 6_2:-60722634 | Msa0922380:CDS |
| TTCGACACTGCAGCTATGTA+TGG | 0.413597 | 6_2:-60723487 | Msa0922380:CDS |
| AAATCTTCAGATATTTAATT+GGG | 0.414526 | 6_2:-60721785 | Msa0922380:CDS |
| TTATGTAGGTGCACAATTGT+TGG | 0.415559 | 6_2:+60721486 | None:intergenic |
| TTAGGCTTAACCAAGTCTAT+TGG | 0.420233 | 6_2:-60723013 | Msa0922380:CDS |
| ATGAGTGCATGGTCCCCTTT+GGG | 0.421394 | 6_2:-60722643 | Msa0922380:CDS |
| GAATTTGGACAAAATGTCCT+TGG | 0.422877 | 6_2:+60721631 | None:intergenic |
| GTTCAGGACTCGCTCAAAAC+AGG | 0.423933 | 6_2:-60724235 | Msa0922380:five_prime_UTR |
| CTATTGCTTCATAATTATGT+AGG | 0.424528 | 6_2:+60721472 | None:intergenic |
| AAAAGGAAGCACAACTCCTT+TGG | 0.434167 | 6_2:+60723078 | None:intergenic |
| AAGGATATTGCAATTACAAC+AGG | 0.441959 | 6_2:-60722568 | Msa0922380:CDS |
| ATTGCAATATCCTTTAGGAT+TGG | 0.446532 | 6_2:+60722577 | None:intergenic |
| ATCTCACTGGAAAATGGATT+AGG | 0.448343 | 6_2:+60723119 | None:intergenic |
| ATGGAAGAGTGCTCTAAGTT+AGG | 0.456616 | 6_2:-60723031 | Msa0922380:CDS |
| TTTCCAGGTTTCAATCTCAC+TGG | 0.459548 | 6_2:+60723106 | None:intergenic |
| GAAGGAAAACAATACATTGA+TGG | 0.461392 | 6_2:-60723653 | Msa0922380:exon |
| GCACTCTTCCATGGCTTCCC+AGG | 0.465475 | 6_2:+60723042 | None:intergenic |
| ATCAGTACACCACAGCTTAG+TGG | 0.475696 | 6_2:+60723384 | None:intergenic |
| ACAGGAATGAGTTCTTCATT+TGG | 0.480565 | 6_2:+60723544 | None:intergenic |
| ACTCGCTCAAAACAGGTTCT+GGG | 0.482141 | 6_2:-60724228 | Msa0922380:five_prime_UTR |
| TATGGTTCTGAGGAGGCCCT+TGG | 0.484789 | 6_2:-60723469 | Msa0922380:CDS |
| TTTGTGCTTGTGCTATAGCT+AGG | 0.484808 | 6_2:+60723446 | None:intergenic |
| CTCGGCTCTTAATAAGACCT+TGG | 0.489398 | 6_2:+60723422 | None:intergenic |
| TTGTTGAAGCTCTTCACCAC+TGG | 0.503746 | 6_2:+60721823 | None:intergenic |
| AGAGAATTTGTATCTGAAGA+TGG | 0.510491 | 6_2:-60721700 | Msa0922380:CDS |
| CCAGAAGTGGTGCTAAACTC+TGG | 0.517029 | 6_2:-60723616 | Msa0922380:CDS |
| GCAGTGAGTTCTTGATTGCC+GGG | 0.526739 | 6_2:+60723341 | None:intergenic |
| AGATGGACCTTACAAAACCT+TGG | 0.527809 | 6_2:-60721683 | Msa0922380:CDS |
| AAAAGGGACCTGGGAAGCCA+TGG | 0.530490 | 6_2:-60723050 | Msa0922380:CDS |
| AAGCACCATTAGCTCCCAAA+GGG | 0.533197 | 6_2:+60722629 | None:intergenic |
| TAACTTAGAGCACTCTTCCA+TGG | 0.535220 | 6_2:+60723033 | None:intergenic |
| CTTGTGCTATAGCTAGGCCA+AGG | 0.535355 | 6_2:+60723452 | None:intergenic |
| GAGATTGAAACCTGGAAATG+AGG | 0.543118 | 6_2:-60723101 | Msa0922380:CDS |
| TCATCCTGACCTTGTCCTCC+CGG | 0.545502 | 6_2:-60723359 | Msa0922380:CDS |
| TCTTGATTGCCGGGAGGACA+AGG | 0.548559 | 6_2:+60723350 | None:intergenic |
| TGGATGGCAGCAGTCAAGAC+AGG | 0.550409 | 6_2:+60723526 | None:intergenic |
| GAATGAGTTCTTCATTTGGT+AGG | 0.552258 | 6_2:+60723548 | None:intergenic |
| AACAGGAAAGAGTGTGCCAC+AGG | 0.559927 | 6_2:-60722551 | Msa0922380:intron |
| ATTGCCGGGAGGACAAGGTC+AGG | 0.562526 | 6_2:+60723355 | None:intergenic |
| GGAGCTAATGGTGCTTCATG+GGG | 0.564543 | 6_2:-60722622 | Msa0922380:CDS |
| TATGGAGAGTCCAATCCTAA+AGG | 0.565521 | 6_2:-60722587 | Msa0922380:CDS |
| TGCAGCTATGTATGGTTCTG+AGG | 0.568339 | 6_2:-60723479 | Msa0922380:CDS |
| TATGGTAGATTGCATTGAGA+TGG | 0.569249 | 6_2:-60721867 | Msa0922380:intron |
| ACCATCCCAAAGATCTTCCA+AGG | 0.572856 | 6_2:+60721666 | None:intergenic |
| ACAAAATGCTACTATTCCAC+CGG | 0.576927 | 6_2:-60722951 | Msa0922380:CDS |
| ATTGCTCACACCAATAGACT+TGG | 0.583541 | 6_2:+60723003 | None:intergenic |
| GAAGAATACACATGAGTGCA+TGG | 0.583873 | 6_2:-60722654 | Msa0922380:CDS |
| ATGACGGTAGCCGACTTGGA+TGG | 0.589071 | 6_2:+60723510 | None:intergenic |
| ACCTTGGAAGATCTTTGGGA+TGG | 0.591940 | 6_2:-60721667 | Msa0922380:CDS |
| TTTCCAGTGAGATTGAAACC+TGG | 0.603382 | 6_2:-60723109 | Msa0922380:CDS |
| TGGTAGGAGAAGCGCTGCTG+AGG | 0.614485 | 6_2:+60723564 | None:intergenic |
| GGTGCTGCTGAGTTCCTGCA+AGG | 0.619576 | 6_2:-60724207 | Msa0922380:five_prime_UTR |
| GAGGTTCCAAACGAAAGCAT+AGG | 0.620977 | 6_2:+60723583 | None:intergenic |
| AGCTATGTATGGTTCTGAGG+AGG | 0.622048 | 6_2:-60723476 | Msa0922380:CDS |
| AGGTTGAAATGAATGTAGCA+TGG | 0.623219 | 6_2:-60722711 | Msa0922380:CDS |
| TTTACCTGATTAACAGCCGG+TGG | 0.624442 | 6_2:+60722935 | None:intergenic |
| TAGCTGCAGTGTCGAAATGA+CGG | 0.624617 | 6_2:+60723494 | None:intergenic |
| TGGTGACGAAAATATCATCT+CGG | 0.629108 | 6_2:+60723404 | None:intergenic |
| ACTAAGCATCCTCTCCTCTG+TGG | 0.633588 | 6_2:+60721724 | None:intergenic |
| ATGAATGTAGCATGGCAGCA+AGG | 0.636069 | 6_2:-60722703 | Msa0922380:CDS |
| AAACCTGGAAATGAGGCCAA+AGG | 0.638184 | 6_2:-60723094 | Msa0922380:CDS |
| TTGACTGCTGCCATCCAAGT+CGG | 0.647898 | 6_2:-60723520 | Msa0922380:CDS |
| GAAGCACCATTAGCTCCCAA+AGG | 0.648653 | 6_2:+60722628 | None:intergenic |
| TTGGACTCTCCATAACAGCA+AGG | 0.652851 | 6_2:+60722596 | None:intergenic |
| GGAACAAGGTGTCACTCCAG+TGG | 0.652866 | 6_2:-60721839 | Msa0922380:CDS |
| ATGGTGAGCTATGATTTCCA+AGG | 0.659203 | 6_2:-60721648 | Msa0922380:exon |
| TTGTGCTATAGCTAGGCCAA+GGG | 0.660191 | 6_2:+60723453 | None:intergenic |
| ACGAAAGCATAGGCATTGTG+TGG | 0.664134 | 6_2:+60723593 | None:intergenic |
| TGGACTCTCCATAACAGCAA+GGG | 0.673246 | 6_2:+60722597 | None:intergenic |
| AAGCAAATACCACAGAGGAG+AGG | 0.674109 | 6_2:-60721733 | Msa0922380:CDS |
| AGTGGTGAAGAGCTTCAACA+AGG | 0.678773 | 6_2:-60721821 | Msa0922380:CDS |
| ATAGCACAAGCACAAAACCA+AGG | 0.699077 | 6_2:-60723439 | Msa0922380:CDS |
| GTGAGTTCTTGATTGCCGGG+AGG | 0.724764 | 6_2:+60723344 | None:intergenic |
| AGCACCATTAGCTCCCAAAG+GGG | 0.726144 | 6_2:+60722630 | None:intergenic |
| TTGAGATGGATATTGGAACA+AGG | 0.740605 | 6_2:-60721853 | Msa0922380:CDS |
| AGATTAAGCAAATACCACAG+AGG | 0.793162 | 6_2:-60721738 | Msa0922380:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGAAAAAACATTATCAAAAT+GGG | + | chr6_2:60722028-60722047 | None:intergenic | 15.0% |
| !! | ATGAAAAAACATTATCAAAA+TGG | + | chr6_2:60722029-60722048 | None:intergenic | 15.0% |
| !! | TATGTACAAAAATTTATAAG+TGG | - | chr6_2:60723451-60723470 | Msa0922380:CDS | 15.0% |
| !!! | TATAAAAGTGTTATATGTTT+TGG | + | chr6_2:60723681-60723700 | None:intergenic | 15.0% |
| !! | AAAATCTTCAGATATTTAAT+TGG | - | chr6_2:60723938-60723957 | Msa0922380:intron | 15.0% |
| !! | AAATCTTCAGATATTTAATT+GGG | - | chr6_2:60723939-60723958 | Msa0922380:intron | 15.0% |
| !! | ATTGAGAAGAAAAACATAAA+AGG | + | chr6_2:60721576-60721595 | None:intergenic | 20.0% |
| !! | TATAGAAATATGATACAAGA+TGG | + | chr6_2:60721788-60721807 | None:intergenic | 20.0% |
| !! | ATCAAAGTTAAATGTTTGAT+TGG | + | chr6_2:60722503-60722522 | None:intergenic | 20.0% |
| !!! | TTGATCTTTGACATTTTATA+AGG | - | chr6_2:60722553-60722572 | Msa0922380:CDS | 20.0% |
| !!! | TTAATGATGGTCTTAAAAAA+TGG | - | chr6_2:60722840-60722859 | Msa0922380:intron | 20.0% |
| !!! | TAATGATGGTCTTAAAAAAT+GGG | - | chr6_2:60722841-60722860 | Msa0922380:intron | 20.0% |
| !! | AATAGTTTCAAGACATATTT+AGG | - | chr6_2:60722869-60722888 | Msa0922380:intron | 20.0% |
| !! | AGAGTCTAAATAATTAGATT+AGG | + | chr6_2:60723651-60723670 | None:intergenic | 20.0% |
| !! | AAAATTCTTGCAATTGAATT+TGG | - | chr6_2:60723713-60723732 | Msa0922380:intron | 20.0% |
| !!! | TTTCAATCAAATTTGGAATT+TGG | + | chr6_2:60724111-60724130 | None:intergenic | 20.0% |
| !! | AATGCAATTTCAATCAAATT+TGG | + | chr6_2:60724118-60724137 | None:intergenic | 20.0% |
| ! | TAAAAGGTGATAAAGATAGT+AGG | + | chr6_2:60721560-60721579 | None:intergenic | 25.0% |
| !! | ACTAATGCAATTTGAAATGT+AGG | + | chr6_2:60721606-60721625 | None:intergenic | 25.0% |
| !! | TAGTTAGTTACAAGTTTGTT+AGG | - | chr6_2:60721703-60721722 | Msa0922380:CDS | 25.0% |
| ! | AGCATATATAGAAAAACTGA+AGG | - | chr6_2:60722053-60722072 | Msa0922380:intron | 25.0% |
| ! | CAAAGATCAAGTTAAAACAA+TGG | + | chr6_2:60722543-60722562 | None:intergenic | 25.0% |
| !! | ATCTTTGACATTTTATAAGG+AGG | - | chr6_2:60722556-60722575 | Msa0922380:CDS | 25.0% |
| !! | TGCTTCCTTTTGATATAAAA+GGG | - | chr6_2:60722658-60722677 | Msa0922380:CDS | 25.0% |
| ! | TTTCAAGACATATTTAGGAA+CGG | - | chr6_2:60722874-60722893 | Msa0922380:intron | 25.0% |
| !! | ATTCGTACTTGAAAATTTTC+AGG | - | chr6_2:60722993-60723012 | Msa0922380:CDS | 25.0% |
| ! | TTGTAATTGCAATATCCTTT+AGG | + | chr6_2:60723155-60723174 | None:intergenic | 25.0% |
| !!! | ATTTTTCCTTTGGAATTTCT+TGG | - | chr6_2:60723199-60723218 | Msa0922380:intron | 25.0% |
| !!! | AATTTGGTTTTCTTTGTTCA+TGG | - | chr6_2:60723260-60723279 | Msa0922380:intron | 25.0% |
| !!! | ATTTGGTTTTCTTTGTTCAT+GGG | - | chr6_2:60723261-60723280 | Msa0922380:intron | 25.0% |
| ! | CGTTCGAAATAAAATATTCA+AGG | + | chr6_2:60723319-60723338 | None:intergenic | 25.0% |
| ! | ATTAATCAAGCTGTTAAGTA+TGG | + | chr6_2:60723379-60723398 | None:intergenic | 25.0% |
| !! | TTTTACAAAATCAACCGATA+AGG | + | chr6_2:60723489-60723508 | None:intergenic | 25.0% |
| ! | GGCTATCTTATAATTTAAGT+TGG | + | chr6_2:60723522-60723541 | None:intergenic | 25.0% |
| ! | GTGTTGAATTCATAGTAAAA+AGG | - | chr6_2:60723790-60723809 | Msa0922380:intron | 25.0% |
| ! | CCAACATTAATAGTTAGTAT+AGG | + | chr6_2:60723837-60723856 | None:intergenic | 25.0% |
| ! | CCTATACTAACTATTAATGT+TGG | - | chr6_2:60723834-60723853 | Msa0922380:intron | 25.0% |
| ! | ACTAACTATTAATGTTGGTA+TGG | - | chr6_2:60723839-60723858 | Msa0922380:intron | 25.0% |
| ! | TAACTGCTTATAAAAAGGAA+TGG | + | chr6_2:60724182-60724201 | None:intergenic | 25.0% |
| ! | TCTCATAACTGCTTATAAAA+AGG | + | chr6_2:60724187-60724206 | None:intergenic | 25.0% |
| ! | CAATTTTCTCAGATTACAAC+CGG | + | chr6_2:60721892-60721911 | None:intergenic | 30.0% |
| GAAGGAAAACAATACATTGA+TGG | - | chr6_2:60722071-60722090 | Msa0922380:intron | 30.0% | |
| GAATTAGATCCATACTACAA+AGG | + | chr6_2:60722461-60722480 | None:intergenic | 30.0% | |
| ! | TTGACATTTTATAAGGAGGT+TGG | - | chr6_2:60722560-60722579 | Msa0922380:CDS | 30.0% |
| ! | TGACATTTTATAAGGAGGTT+GGG | - | chr6_2:60722561-60722580 | Msa0922380:CDS | 30.0% |
| ! | GTGCTTCCTTTTGATATAAA+AGG | - | chr6_2:60722657-60722676 | Msa0922380:CDS | 30.0% |
| ! | TTTTGATATAAAAGGGACCT+GGG | - | chr6_2:60722665-60722684 | Msa0922380:CDS | 30.0% |
| ! | ATTTTTACCTGATTAACAGC+CGG | + | chr6_2:60722795-60722814 | None:intergenic | 30.0% |
| TACCTTCGTCAATTTAATGA+TGG | - | chr6_2:60722827-60722846 | Msa0922380:intron | 30.0% | |
| !! | TACTTTGATGATGAAGAGAT+TGG | - | chr6_2:60722968-60722987 | Msa0922380:CDS | 30.0% |
| TCATGTGTATTCTTCTTTCT+TGG | + | chr6_2:60723065-60723084 | None:intergenic | 30.0% | |
| !! | ATTGCAATATCCTTTAGGAT+TGG | + | chr6_2:60723150-60723169 | None:intergenic | 30.0% |
| AAGGATATTGCAATTACAAC+AGG | - | chr6_2:60723156-60723175 | Msa0922380:intron | 30.0% | |
| AAAGATCCAAGAAATTCCAA+AGG | + | chr6_2:60723208-60723227 | None:intergenic | 30.0% | |
| TCCTAACCAAATAAGTTTGA+AGG | - | chr6_2:60723231-60723250 | Msa0922380:intron | 30.0% | |
| ACCTTCAAACTTATTTGGTT+AGG | + | chr6_2:60723235-60723254 | None:intergenic | 30.0% | |
| CTAGTACCTTCAAACTTATT+TGG | + | chr6_2:60723240-60723259 | None:intergenic | 30.0% | |
| !! | AGTTTGAAGGTACTAGAATT+TGG | - | chr6_2:60723244-60723263 | Msa0922380:intron | 30.0% |
| !! | ACTTATAAAACTGACTTGCA+AGG | + | chr6_2:60723618-60723637 | None:intergenic | 30.0% |
| GATTTCAAAATGACTAACAG+TGG | + | chr6_2:60723758-60723777 | None:intergenic | 30.0% | |
| AGAGAATTTGTATCTGAAGA+TGG | - | chr6_2:60724024-60724043 | Msa0922380:intron | 30.0% | |
| AGCTTATCCAAAAGTTGTTC+AGG | - | chr6_2:60721473-60721492 | Msa0922380:three_prime_UTR | 35.0% | |
| !! | GTTGATAGTAGTTGAGTAGT+TGG | - | chr6_2:60721679-60721698 | Msa0922380:CDS | 35.0% |
| CTAAGGTTATGTTTGTAGCA+CGG | + | chr6_2:60721993-60722012 | None:intergenic | 35.0% | |
| GAATGAGTTCTTCATTTGGT+AGG | + | chr6_2:60722179-60722198 | None:intergenic | 35.0% | |
| ACAGGAATGAGTTCTTCATT+TGG | + | chr6_2:60722183-60722202 | None:intergenic | 35.0% | |
| ! | TGGTGACGAAAATATCATCT+CGG | + | chr6_2:60722323-60722342 | None:intergenic | 35.0% |
| GAACATTTGCCTTTGTAGTA+TGG | - | chr6_2:60722449-60722468 | Msa0922380:intron | 35.0% | |
| ! | ATCTCACTGGAAAATGGATT+AGG | + | chr6_2:60722608-60722627 | None:intergenic | 35.0% |
| GTTTCAATCTCACTGGAAAA+TGG | + | chr6_2:60722614-60722633 | None:intergenic | 35.0% | |
| ! | CAGGTCCCTTTTATATCAAA+AGG | + | chr6_2:60722666-60722685 | None:intergenic | 35.0% |
| ! | CTTTTGATATAAAAGGGACC+TGG | - | chr6_2:60722664-60722683 | Msa0922380:CDS | 35.0% |
| TTAGGCTTAACCAAGTCTAT+TGG | - | chr6_2:60722711-60722730 | Msa0922380:CDS | 35.0% | |
| ! | TCTATTGGTGTGAGCAATTT+TGG | - | chr6_2:60722726-60722745 | Msa0922380:intron | 35.0% |
| ACAAAATGCTACTATTCCAC+CGG | - | chr6_2:60722773-60722792 | Msa0922380:intron | 35.0% | |
| GACCATCATTAAATTGACGA+AGG | + | chr6_2:60722832-60722851 | None:intergenic | 35.0% | |
| AGGTTGAAATGAATGTAGCA+TGG | - | chr6_2:60723013-60723032 | Msa0922380:CDS | 35.0% | |
| TACAAAATCAACCGATAAGG+CGG | + | chr6_2:60723486-60723505 | None:intergenic | 35.0% | |
| GCTTCAATAGATCTCAAAAC+AGG | + | chr6_2:60723543-60723562 | None:intergenic | 35.0% | |
| ! | TCTATTGAAGCACCTGTTAT+CGG | - | chr6_2:60723552-60723571 | Msa0922380:CDS | 35.0% |
| !! | TAAAACTGACTTGCAAGGTA+AGG | + | chr6_2:60723613-60723632 | None:intergenic | 35.0% |
| TATGGTAGATTGCATTGAGA+TGG | - | chr6_2:60723857-60723876 | Msa0922380:intron | 35.0% | |
| GATTGCATTGAGATGGATAT+TGG | - | chr6_2:60723864-60723883 | Msa0922380:intron | 35.0% | |
| TTGAGATGGATATTGGAACA+AGG | - | chr6_2:60723871-60723890 | Msa0922380:intron | 35.0% | |
| AGATTAAGCAAATACCACAG+AGG | - | chr6_2:60723986-60724005 | Msa0922380:intron | 35.0% | |
| !! | AGATCTTCCAAGGTTTTGTA+AGG | + | chr6_2:60724051-60724070 | None:intergenic | 35.0% |
| ACAAAACCTTGGAAGATCTT+TGG | - | chr6_2:60724052-60724071 | Msa0922380:intron | 35.0% | |
| CAAAACCTTGGAAGATCTTT+GGG | - | chr6_2:60724053-60724072 | Msa0922380:intron | 35.0% | |
| GAATTTGGACAAAATGTCCT+TGG | + | chr6_2:60724096-60724115 | None:intergenic | 35.0% | |
| CTGCTTATAAAAAGGAATGG+AGG | + | chr6_2:60724179-60724198 | None:intergenic | 35.0% | |
| TTATGTAGGTGCACAATTGT+TGG | + | chr6_2:60724241-60724260 | None:intergenic | 35.0% | |
| GTGTCAGTACTTCATGACAT+GGG | + | chr6_2:60721841-60721860 | None:intergenic | 40.0% | |
| TGTGTCAGTACTTCATGACA+TGG | + | chr6_2:60721842-60721861 | None:intergenic | 40.0% | |
| ! | TATACGTGTTGTTGTCATGC+CGG | - | chr6_2:60721932-60721951 | Msa0922380:intron | 40.0% |
| GCACGGACACTTCAAATTAA+AGG | + | chr6_2:60721976-60721995 | None:intergenic | 40.0% | |
| CGTGCTACAAACATAACCTT+AGG | - | chr6_2:60721991-60722010 | Msa0922380:intron | 40.0% | |
| GCTACAAACATAACCTTAGG+AGG | - | chr6_2:60721994-60722013 | Msa0922380:intron | 40.0% | |
| ATGGGATTAAGAACCTCCTA+AGG | + | chr6_2:60722010-60722029 | None:intergenic | 40.0% | |
| ACAAAAAGCAGTTCCAGAAG+TGG | - | chr6_2:60722095-60722114 | Msa0922380:intron | 40.0% | |
| ACAATGCCTATGCTTTCGTT+TGG | - | chr6_2:60722135-60722154 | Msa0922380:intron | 40.0% | |
| TTTGTGCTTGTGCTATAGCT+AGG | + | chr6_2:60722281-60722300 | None:intergenic | 40.0% | |
| ATAGCACAAGCACAAAACCA+AGG | - | chr6_2:60722285-60722304 | Msa0922380:intron | 40.0% | |
| ! | TGTTTGATTGGCTACACTGA+CGG | + | chr6_2:60722491-60722510 | None:intergenic | 40.0% |
| TTTCCAGTGAGATTGAAACC+TGG | - | chr6_2:60722615-60722634 | Msa0922380:CDS | 40.0% | |
| TTTCCAGGTTTCAATCTCAC+TGG | + | chr6_2:60722621-60722640 | None:intergenic | 40.0% | |
| GAGATTGAAACCTGGAAATG+AGG | - | chr6_2:60722623-60722642 | Msa0922380:CDS | 40.0% | |
| ! | AAAAGGAAGCACAACTCCTT+TGG | + | chr6_2:60722649-60722668 | None:intergenic | 40.0% |
| ! | TAACTTAGAGCACTCTTCCA+TGG | + | chr6_2:60722694-60722713 | None:intergenic | 40.0% |
| !! | ATGGAAGAGTGCTCTAAGTT+AGG | - | chr6_2:60722693-60722712 | Msa0922380:CDS | 40.0% |
| ATTGCTCACACCAATAGACT+TGG | + | chr6_2:60722724-60722743 | None:intergenic | 40.0% | |
| GAAGAATACACATGAGTGCA+TGG | - | chr6_2:60723070-60723089 | Msa0922380:CDS | 40.0% | |
| TATGGAGAGTCCAATCCTAA+AGG | - | chr6_2:60723137-60723156 | Msa0922380:CDS | 40.0% | |
| CCAAAGGAAAAATTCACCTG+TGG | + | chr6_2:60723192-60723211 | None:intergenic | 40.0% | |
| ! | CCACAGGTGAATTTTTCCTT+TGG | - | chr6_2:60723189-60723208 | Msa0922380:intron | 40.0% |
| ACAAAATCAACCGATAAGGC+GGG | + | chr6_2:60723485-60723504 | None:intergenic | 40.0% | |
| ! | CTATTGAAGCACCTGTTATC+GGG | - | chr6_2:60723553-60723572 | Msa0922380:CDS | 40.0% |
| ATAGGACTTGAAGAGTGACA+TGG | + | chr6_2:60723819-60723838 | None:intergenic | 40.0% | |
| AGATGGACCTTACAAAACCT+TGG | - | chr6_2:60724041-60724060 | Msa0922380:intron | 40.0% | |
| ATGGTGAGCTATGATTTCCA+AGG | - | chr6_2:60724076-60724095 | Msa0922380:intron | 40.0% | |
| ! | AGCGAGTCCTGAACAACTTT+TGG | + | chr6_2:60721483-60721502 | None:intergenic | 45.0% |
| ACTCGCTCAAAACAGGTTCT+GGG | - | chr6_2:60721496-60721515 | Msa0922380:three_prime_UTR | 45.0% | |
| GCATGTCTGATATCTGACAC+CGG | + | chr6_2:60721954-60721973 | None:intergenic | 45.0% | |
| ! | ACGAAAGCATAGGCATTGTG+TGG | + | chr6_2:60722134-60722153 | None:intergenic | 45.0% |
| ! | GAGGTTCCAAACGAAAGCAT+AGG | + | chr6_2:60722144-60722163 | None:intergenic | 45.0% |
| ! | TAGCTGCAGTGTCGAAATGA+CGG | + | chr6_2:60722233-60722252 | None:intergenic | 45.0% |
| TTCGACACTGCAGCTATGTA+TGG | - | chr6_2:60722237-60722256 | Msa0922380:intron | 45.0% | |
| ! | TGCAGCTATGTATGGTTCTG+AGG | - | chr6_2:60722245-60722264 | Msa0922380:intron | 45.0% |
| !! | AGCTATGTATGGTTCTGAGG+AGG | - | chr6_2:60722248-60722267 | Msa0922380:intron | 45.0% |
| TTGTGCTATAGCTAGGCCAA+GGG | + | chr6_2:60722274-60722293 | None:intergenic | 45.0% | |
| CTCGGCTCTTAATAAGACCT+TGG | + | chr6_2:60722305-60722324 | None:intergenic | 45.0% | |
| ! | TTTTCGTCACCACTAAGCTG+TGG | - | chr6_2:60722331-60722350 | Msa0922380:intron | 45.0% |
| ATCAGTACACCACAGCTTAG+TGG | + | chr6_2:60722343-60722362 | None:intergenic | 45.0% | |
| TGCAGTGAGTTCTTGATTGC+CGG | + | chr6_2:60722387-60722406 | None:intergenic | 45.0% | |
| AAACCTGGAAATGAGGCCAA+AGG | - | chr6_2:60722630-60722649 | Msa0922380:CDS | 45.0% | |
| ! | TATTCCACCGGCTGTTAATC+AGG | - | chr6_2:60722785-60722804 | Msa0922380:intron | 45.0% |
| TTTACCTGATTAACAGCCGG+TGG | + | chr6_2:60722792-60722811 | None:intergenic | 45.0% | |
| ATGAATGTAGCATGGCAGCA+AGG | - | chr6_2:60723021-60723040 | Msa0922380:CDS | 45.0% | |
| AAGCACCATTAGCTCCCAAA+GGG | + | chr6_2:60723098-60723117 | None:intergenic | 45.0% | |
| TGGACTCTCCATAACAGCAA+GGG | + | chr6_2:60723130-60723149 | None:intergenic | 45.0% | |
| TTGGACTCTCCATAACAGCA+AGG | + | chr6_2:60723131-60723150 | None:intergenic | 45.0% | |
| CAAAATCAACCGATAAGGCG+GGG | + | chr6_2:60723484-60723503 | None:intergenic | 45.0% | |
| TTGTTGAAGCTCTTCACCAC+TGG | + | chr6_2:60723904-60723923 | None:intergenic | 45.0% | |
| AGTGGTGAAGAGCTTCAACA+AGG | - | chr6_2:60723903-60723922 | Msa0922380:intron | 45.0% | |
| AAGCAAATACCACAGAGGAG+AGG | - | chr6_2:60723991-60724010 | Msa0922380:intron | 45.0% | |
| ! | ACCTTGGAAGATCTTTGGGA+TGG | - | chr6_2:60724057-60724076 | Msa0922380:intron | 45.0% |
| ACCATCCCAAAGATCTTCCA+AGG | + | chr6_2:60724061-60724080 | None:intergenic | 45.0% | |
| GTTCAGGACTCGCTCAAAAC+AGG | - | chr6_2:60721489-60721508 | Msa0922380:three_prime_UTR | 50.0% | |
| GACTCGCTCAAAACAGGTTC+TGG | - | chr6_2:60721495-60721514 | Msa0922380:three_prime_UTR | 50.0% | |
| CACCTAACACATCGAGACAC+CGG | - | chr6_2:60721870-60721889 | Msa0922380:intron | 50.0% | |
| AACCGGTGTCTCGATGTGTT+AGG | + | chr6_2:60721875-60721894 | None:intergenic | 50.0% | |
| CCAGAGTTTAGCACCACTTC+TGG | + | chr6_2:60722111-60722130 | None:intergenic | 50.0% | |
| ! | CCAGAAGTGGTGCTAAACTC+TGG | - | chr6_2:60722108-60722127 | Msa0922380:intron | 50.0% |
| TTGACTGCTGCCATCCAAGT+CGG | - | chr6_2:60722204-60722223 | Msa0922380:intron | 50.0% | |
| CTTGTGCTATAGCTAGGCCA+AGG | + | chr6_2:60722275-60722294 | None:intergenic | 50.0% | |
| GCAGTGAGTTCTTGATTGCC+GGG | + | chr6_2:60722386-60722405 | None:intergenic | 50.0% | |
| TGGCTACACTGACGGTGTAT+TGG | + | chr6_2:60722483-60722502 | None:intergenic | 50.0% | |
| ACTCCTTTGGCCTCATTTCC+AGG | + | chr6_2:60722636-60722655 | None:intergenic | 50.0% | |
| ATGAGTGCATGGTCCCCTTT+GGG | - | chr6_2:60723081-60723100 | Msa0922380:CDS | 50.0% | |
| AGCACCATTAGCTCCCAAAG+GGG | + | chr6_2:60723097-60723116 | None:intergenic | 50.0% | |
| ! | GAAGCACCATTAGCTCCCAA+AGG | + | chr6_2:60723099-60723118 | None:intergenic | 50.0% |
| TGGGAGCTAATGGTGCTTCA+TGG | - | chr6_2:60723100-60723119 | Msa0922380:CDS | 50.0% | |
| GGGAGCTAATGGTGCTTCAT+GGG | - | chr6_2:60723101-60723120 | Msa0922380:CDS | 50.0% | |
| GGAGCTAATGGTGCTTCATG+GGG | - | chr6_2:60723102-60723121 | Msa0922380:CDS | 50.0% | |
| !! | ATGGGGTACCCTTGCTGTTA+TGG | - | chr6_2:60723119-60723138 | Msa0922380:CDS | 50.0% |
| ! | AACAGGAAAGAGTGTGCCAC+AGG | - | chr6_2:60723173-60723192 | Msa0922380:intron | 50.0% |
| GGTTGTATTCCCCGCCTTAT+CGG | - | chr6_2:60723472-60723491 | Msa0922380:CDS | 50.0% | |
| CTAAAGCACGACCCGATAAC+AGG | + | chr6_2:60723567-60723586 | None:intergenic | 50.0% | |
| ACTAAGCATCCTCTCCTCTG+TGG | + | chr6_2:60724003-60724022 | None:intergenic | 50.0% | |
| CCAGAAGTCAACGACCTTGC+AGG | + | chr6_2:60721534-60721553 | None:intergenic | 55.0% | |
| !! | CCTGCAAGGTCGTTGACTTC+TGG | - | chr6_2:60721531-60721550 | Msa0922380:three_prime_UTR | 55.0% |
| TGGATGGCAGCAGTCAAGAC+AGG | + | chr6_2:60722201-60722220 | None:intergenic | 55.0% | |
| !! | ATGACGGTAGCCGACTTGGA+TGG | + | chr6_2:60722217-60722236 | None:intergenic | 55.0% |
| CGAAATGACGGTAGCCGACT+TGG | + | chr6_2:60722221-60722240 | None:intergenic | 55.0% | |
| !! | TATGGTTCTGAGGAGGCCCT+TGG | - | chr6_2:60722255-60722274 | Msa0922380:intron | 55.0% |
| TCATCCTGACCTTGTCCTCC+CGG | - | chr6_2:60722365-60722384 | Msa0922380:intron | 55.0% | |
| TCTTGATTGCCGGGAGGACA+AGG | + | chr6_2:60722377-60722396 | None:intergenic | 55.0% | |
| GTGAGTTCTTGATTGCCGGG+AGG | + | chr6_2:60722383-60722402 | None:intergenic | 55.0% | |
| AAAAGGGACCTGGGAAGCCA+TGG | - | chr6_2:60722674-60722693 | Msa0922380:CDS | 55.0% | |
| CATGAGTGCATGGTCCCCTT+TGG | - | chr6_2:60723080-60723099 | Msa0922380:CDS | 55.0% | |
| ! | TGGTCCCCTTTGGGAGCTAA+TGG | - | chr6_2:60723090-60723109 | Msa0922380:CDS | 55.0% |
| !! | GGAACAAGGTGTCACTCCAG+TGG | - | chr6_2:60723885-60723904 | Msa0922380:intron | 55.0% |
| !! | GGTGCTGCTGAGTTCCTGCA+AGG | - | chr6_2:60721517-60721536 | Msa0922380:three_prime_UTR | 60.0% |
| !! | TGGTAGGAGAAGCGCTGCTG+AGG | + | chr6_2:60722163-60722182 | None:intergenic | 60.0% |
| ATTGCCGGGAGGACAAGGTC+AGG | + | chr6_2:60722372-60722391 | None:intergenic | 60.0% | |
| GCACTCTTCCATGGCTTCCC+AGG | + | chr6_2:60722685-60722704 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_2 | gene | 60721473 | 60724273 | 60721473 | ID=Msa0922380;Name=Msa0922380 |
| chr6_2 | mRNA | 60721473 | 60724273 | 60721473 | ID=Msa0922380-mRNA-1;Parent=Msa0922380;Name=Msa0922380-mRNA-1;_AED=0.26;_eAED=0.26;_QI=115|1|1|1|0.75|0.6|5|184|317 |
| chr6_2 | exon | 60721473 | 60721881 | 60721473 | ID=Msa0922380-mRNA-1:exon:9351;Parent=Msa0922380-mRNA-1 |
| chr6_2 | exon | 60722552 | 60722731 | 60722552 | ID=Msa0922380-mRNA-1:exon:9350;Parent=Msa0922380-mRNA-1 |
| chr6_2 | exon | 60722940 | 60723171 | 60722940 | ID=Msa0922380-mRNA-1:exon:9349;Parent=Msa0922380-mRNA-1 |
| chr6_2 | exon | 60723340 | 60723691 | 60723340 | ID=Msa0922380-mRNA-1:exon:9348;Parent=Msa0922380-mRNA-1 |
| chr6_2 | exon | 60724194 | 60724273 | 60724194 | ID=Msa0922380-mRNA-1:exon:9347;Parent=Msa0922380-mRNA-1 |
| chr6_2 | five_prime_UTR | 60724194 | 60724273 | 60724194 | ID=Msa0922380-mRNA-1:five_prime_utr;Parent=Msa0922380-mRNA-1 |
| chr6_2 | five_prime_UTR | 60723657 | 60723691 | 60723657 | ID=Msa0922380-mRNA-1:five_prime_utr;Parent=Msa0922380-mRNA-1 |
| chr6_2 | CDS | 60723340 | 60723656 | 60723340 | ID=Msa0922380-mRNA-1:cds;Parent=Msa0922380-mRNA-1 |
| chr6_2 | CDS | 60722940 | 60723171 | 60722940 | ID=Msa0922380-mRNA-1:cds;Parent=Msa0922380-mRNA-1 |
| chr6_2 | CDS | 60722552 | 60722731 | 60722552 | ID=Msa0922380-mRNA-1:cds;Parent=Msa0922380-mRNA-1 |
| chr6_2 | CDS | 60721657 | 60721881 | 60721657 | ID=Msa0922380-mRNA-1:cds;Parent=Msa0922380-mRNA-1 |
| chr6_2 | three_prime_UTR | 60721473 | 60721656 | 60721473 | ID=Msa0922380-mRNA-1:three_prime_utr;Parent=Msa0922380-mRNA-1 |
| Gene Sequence |
| Protein sequence |
