Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0923320 | XP_003620154.1 | 97.753 | 712 | 12 | 2 | 1 | 708 | 1 | 712 | 0.0 | 1422 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0923320 | sp|Q9SHY2|YSL7_ARATH | 71.079 | 695 | 185 | 5 | 18 | 706 | 1 | 685 | 0.0 | 1039 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0896760 | Msa0923320 | 0.891552 | 3.579691e-74 | -8.615850e-47 |
| Msa0923320 | Msa1225730 | -0.829463 | 5.075421e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0923320 | MtrunA17_Chr6g0481821 | 97.753 | 712 | 12 | 2 | 1 | 708 | 1 | 712 | 0.0 | 1422 |
| Msa0923320 | MtrunA17_Chr5g0443261 | 72.821 | 677 | 178 | 3 | 34 | 706 | 6 | 680 | 0.0 | 999 |
| Msa0923320 | MtrunA17_Chr3g0109311 | 70.130 | 693 | 200 | 4 | 19 | 706 | 4 | 694 | 0.0 | 981 |
| Msa0923320 | MtrunA17_Chr3g0109321 | 70.732 | 697 | 188 | 5 | 16 | 708 | 6 | 690 | 0.0 | 948 |
| Msa0923320 | MtrunA17_Chr5g0443301 | 72.514 | 553 | 146 | 3 | 158 | 706 | 1 | 551 | 0.0 | 801 |
| Msa0923320 | MtrunA17_Chr7g0224611 | 57.298 | 644 | 261 | 7 | 59 | 693 | 35 | 673 | 0.0 | 766 |
| Msa0923320 | MtrunA17_Chr3g0127441 | 53.046 | 673 | 298 | 8 | 28 | 693 | 2 | 663 | 0.0 | 749 |
| Msa0923320 | MtrunA17_Chr1g0146591 | 51.403 | 677 | 311 | 7 | 31 | 696 | 6 | 675 | 0.0 | 724 |
| Msa0923320 | MtrunA17_Chr1g0146651 | 51.714 | 671 | 298 | 9 | 43 | 696 | 11 | 672 | 0.0 | 721 |
| Msa0923320 | MtrunA17_Chr3g0119981 | 51.786 | 672 | 298 | 10 | 43 | 697 | 11 | 673 | 0.0 | 721 |
| Msa0923320 | MtrunA17_Chr1g0146641 | 50.665 | 677 | 316 | 7 | 31 | 696 | 6 | 675 | 0.0 | 720 |
| Msa0923320 | MtrunA17_Chr1g0189011 | 51.326 | 641 | 297 | 7 | 62 | 695 | 47 | 679 | 0.0 | 709 |
| Msa0923320 | MtrunA17_Chr1g0146601 | 52.209 | 498 | 230 | 5 | 201 | 697 | 261 | 751 | 0.0 | 556 |
| Msa0923320 | MtrunA17_Chr1g0146601 | 44.444 | 189 | 83 | 6 | 27 | 205 | 25 | 201 | 9.78e-40 | 156 |
| Msa0923320 | MtrunA17_Chr5g0443291 | 78.641 | 103 | 22 | 0 | 46 | 148 | 18 | 120 | 6.52e-47 | 162 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0923320 | AT1G65730.1 | 71.079 | 695 | 185 | 5 | 18 | 706 | 1 | 685 | 0.0 | 1039 |
| Msa0923320 | AT3G17650.1 | 72.557 | 696 | 172 | 5 | 29 | 706 | 16 | 710 | 0.0 | 1007 |
| Msa0923320 | AT3G17650.2 | 72.557 | 696 | 172 | 5 | 29 | 706 | 16 | 710 | 0.0 | 1007 |
| Msa0923320 | AT1G48370.1 | 70.927 | 712 | 189 | 5 | 13 | 706 | 9 | 720 | 0.0 | 1004 |
| Msa0923320 | AT1G48370.2 | 72.711 | 557 | 144 | 3 | 158 | 706 | 1 | 557 | 0.0 | 817 |
| Msa0923320 | AT3G27020.1 | 58.283 | 664 | 264 | 7 | 38 | 693 | 12 | 670 | 0.0 | 786 |
| Msa0923320 | AT5G41000.1 | 56.744 | 645 | 264 | 7 | 59 | 693 | 28 | 667 | 0.0 | 746 |
| Msa0923320 | AT5G53550.3 | 53.647 | 658 | 286 | 6 | 45 | 694 | 23 | 669 | 0.0 | 743 |
| Msa0923320 | AT5G53550.1 | 53.647 | 658 | 286 | 6 | 45 | 694 | 23 | 669 | 0.0 | 743 |
| Msa0923320 | AT5G53550.6 | 53.647 | 658 | 286 | 6 | 45 | 694 | 23 | 669 | 0.0 | 743 |
| Msa0923320 | AT5G53550.5 | 53.647 | 658 | 286 | 6 | 45 | 694 | 23 | 669 | 0.0 | 743 |
| Msa0923320 | AT5G53550.2 | 53.647 | 658 | 286 | 6 | 45 | 694 | 23 | 669 | 0.0 | 743 |
| Msa0923320 | AT4G24120.1 | 51.954 | 691 | 300 | 9 | 17 | 695 | 2 | 672 | 0.0 | 737 |
| Msa0923320 | AT5G24380.1 | 52.262 | 641 | 294 | 5 | 60 | 693 | 25 | 660 | 0.0 | 720 |
| Msa0923320 | AT5G41000.2 | 54.419 | 645 | 254 | 7 | 59 | 693 | 28 | 642 | 0.0 | 704 |
| Msa0923320 | AT5G53550.4 | 55.426 | 516 | 220 | 4 | 180 | 694 | 1 | 507 | 0.0 | 608 |
| Msa0923320 | AT5G41000.3 | 56.452 | 496 | 207 | 6 | 202 | 693 | 1 | 491 | 0.0 | 576 |
| Msa0923320 | AT5G45450.1 | 66.972 | 218 | 65 | 2 | 490 | 706 | 1 | 212 | 3.75e-99 | 304 |
Find 182 sgRNAs with CRISPR-Local
Find 382 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACAAAGTGCATTGAAAATT+TGG | 0.132892 | 6_2:-63423673 | None:intergenic |
| ACTTGTGTTGTTGCTTCTTC+TGG | 0.151174 | 6_2:+63418523 | Msa0923320:CDS |
| ATGGCAATACCTTTCTATTT+AGG | 0.166528 | 6_2:+63423159 | Msa0923320:CDS |
| TAATGTCTCTGCTGGTCTTT+TGG | 0.168239 | 6_2:+63418408 | Msa0923320:CDS |
| TAATTTCACCTTGTGTCTTT+TGG | 0.182441 | 6_2:+63422911 | Msa0923320:CDS |
| GGTGCTAACTCATACCTTAT+TGG | 0.192771 | 6_2:+63422369 | Msa0923320:CDS |
| CCATTGTTGTTCCGATTATT+TGG | 0.193236 | 6_2:-63422882 | None:intergenic |
| TCCTTGGAGGAGTTCTTTCT+TGG | 0.198308 | 6_2:+63421992 | Msa0923320:CDS |
| GATAGGGTTGATACTTTCTT+AGG | 0.214363 | 6_2:+63423390 | Msa0923320:CDS |
| TCTTAGGAAATTAATTAATT+AGG | 0.217932 | 6_2:+63423406 | Msa0923320:exon |
| GCATGATTTGATTGTCATTT+GGG | 0.227033 | 6_2:+63423608 | Msa0923320:three_prime_UTR |
| TTTGCACCTGCTGTTGCTTC+TGG | 0.245860 | 6_2:+63423264 | Msa0923320:CDS |
| TTGCTTTGCTATATATTCTT+TGG | 0.247612 | 6_2:+63423063 | Msa0923320:CDS |
| GATTGTGGTAAACTTGATTA+AGG | 0.249504 | 6_2:+63423092 | Msa0923320:CDS |
| CCACGCTCCGATTGAGAAAA+TGG | 0.260199 | 6_2:-63422716 | None:intergenic |
| TTCAAGGAATTCAAGGTTAC+AGG | 0.260833 | 6_2:+63422085 | Msa0923320:CDS |
| GGATTTGGAAGTTACCTATT+TGG | 0.261414 | 6_2:+63420724 | Msa0923320:CDS |
| GTATTCTCTTGTCTAGTAAA+AGG | 0.283358 | 6_2:-63418490 | None:intergenic |
| CCTTGGAGGAGTTCTTTCTT+GGG | 0.290700 | 6_2:+63421993 | Msa0923320:CDS |
| CTTGTATGAACAGGAGGATT+TGG | 0.291617 | 6_2:+63420709 | Msa0923320:intron |
| GTGCTAACTCATACCTTATT+GGG | 0.296695 | 6_2:+63422370 | Msa0923320:CDS |
| TGCATGATTTGATTGTCATT+TGG | 0.297920 | 6_2:+63423607 | Msa0923320:three_prime_UTR |
| ACTGATATATTGATGATATA+TGG | 0.304269 | 6_2:-63421967 | None:intergenic |
| GTCTTTAGATCCTTAAGATT+TGG | 0.313849 | 6_2:-63418092 | None:intergenic |
| ACATCTTCCCTCAACTAAAA+TGG | 0.319301 | 6_2:+63422587 | Msa0923320:CDS |
| TCTTATGGGGTTTCTTTCAA+TGG | 0.331499 | 6_2:+63421637 | Msa0923320:CDS |
| GAAGTTTGATATTGTTTGTT+TGG | 0.332768 | 6_2:+63423211 | Msa0923320:CDS |
| TGTCAAGGTCCACAAATGAT+AGG | 0.332824 | 6_2:+63423373 | Msa0923320:CDS |
| CCTACATGGTTTGCAATTAG+TGG | 0.333118 | 6_2:+63422523 | Msa0923320:CDS |
| TTGAATTCCTTGAAGGTTGC+TGG | 0.339414 | 6_2:-63422076 | None:intergenic |
| TGATATGTGGTGATGGAATA+TGG | 0.339780 | 6_2:+63423289 | Msa0923320:CDS |
| ACAAGGATTCGGTTCTTTAC+CGG | 0.361924 | 6_2:+63423029 | Msa0923320:CDS |
| TTTCAAGCCTTCCCTTCATT+AGG | 0.370895 | 6_2:+63421687 | Msa0923320:CDS |
| GGTAAACTTGATTAAGGATT+CGG | 0.378893 | 6_2:+63423098 | Msa0923320:CDS |
| CTTTAAGAAAGAGTTGTTTC+CGG | 0.382437 | 6_2:-63422492 | None:intergenic |
| GCAATTATCCATCCCAACTT+TGG | 0.383583 | 6_2:-63420799 | None:intergenic |
| TTGACTATACAAACCCAATA+AGG | 0.387419 | 6_2:-63422383 | None:intergenic |
| TTTGTACCAATGACCCTCTC+TGG | 0.398473 | 6_2:-63422040 | None:intergenic |
| CTTATGCAAGATTTCAAAAC+CGG | 0.403681 | 6_2:+63422820 | Msa0923320:CDS |
| AAGGATTCGGTTGGTAAGGT+AGG | 0.403845 | 6_2:+63423111 | Msa0923320:CDS |
| ATAATAATGAGCATGAAGAT+AGG | 0.408695 | 6_2:+63418122 | Msa0923320:CDS |
| CTCAGTTGTGCCTCTTAGAA+AGG | 0.409163 | 6_2:+63420855 | Msa0923320:CDS |
| TGTAACCTTGAATTCCTTGA+AGG | 0.413896 | 6_2:-63422083 | None:intergenic |
| CATGTTCACTCATACCAAAT+AGG | 0.417530 | 6_2:-63420738 | None:intergenic |
| CACATGTCAATGGCAAAATA+AGG | 0.417542 | 6_2:-63423183 | None:intergenic |
| AAGTTTGATATTGTTTGTTT+GGG | 0.419735 | 6_2:+63423212 | Msa0923320:CDS |
| GTTGCTTCTGGTTTGATATG+TGG | 0.420440 | 6_2:+63423276 | Msa0923320:CDS |
| GGAAATTAATTAATTAGGCT+TGG | 0.421123 | 6_2:+63423411 | Msa0923320:exon |
| AAGTTTCATTTCATAATCCT+TGG | 0.422342 | 6_2:+63418058 | Msa0923320:five_prime_UTR |
| GACAAGAACTTCATGCAAAT+AGG | 0.424104 | 6_2:-63423354 | None:intergenic |
| TAGATCCTTAAGATTTGGTT+CGG | 0.435918 | 6_2:-63418087 | None:intergenic |
| CTTGAAGGTTGCTGGGACCA+AGG | 0.438296 | 6_2:-63422068 | None:intergenic |
| GGTCTTAACCCTCCGATTCA+AGG | 0.439010 | 6_2:+63423699 | Msa0923320:three_prime_UTR |
| CAGGAAGCAAGTGAAATTGT+TGG | 0.441495 | 6_2:+63421593 | Msa0923320:intron |
| ACATGGATCGTGGTGAAGCC+AGG | 0.443249 | 6_2:-63422852 | None:intergenic |
| GATATTGTTTGTTTGGGAAA+AGG | 0.445126 | 6_2:+63423218 | Msa0923320:CDS |
| AAATTCTCATTCCCTTGAAT+CGG | 0.446696 | 6_2:-63423711 | None:intergenic |
| ACTAGTGTCTGAGGATTGAT+TGG | 0.448515 | 6_2:-63420764 | None:intergenic |
| TTCTCAATCGGAGCGTGGGC+TGG | 0.448663 | 6_2:+63422721 | Msa0923320:CDS |
| CAAATAATCGGAACAACAAT+GGG | 0.448813 | 6_2:+63422883 | Msa0923320:CDS |
| TACCGCAACATGGCAATACT+TGG | 0.450255 | 6_2:+63423003 | Msa0923320:CDS |
| TATACAGCTGCTGATGGGTG+TGG | 0.451437 | 6_2:+63421663 | Msa0923320:CDS |
| AGGAAGCAAGTGAAATTGTT+GGG | 0.453448 | 6_2:+63421594 | Msa0923320:intron |
| AGTATCCGAACCAAATCTTA+AGG | 0.455357 | 6_2:+63418082 | Msa0923320:five_prime_UTR |
| TAGAAACCAGAGAGGGTCAT+TGG | 0.461241 | 6_2:+63422034 | Msa0923320:CDS |
| ATGCTAAGGTTGGAGCAATC+AGG | 0.465083 | 6_2:-63422630 | None:intergenic |
| AGCAACCTTCAAGGAATTCA+AGG | 0.467764 | 6_2:+63422078 | Msa0923320:CDS |
| ATTCTTTGGCGCGGCGATTG+TGG | 0.470507 | 6_2:+63423077 | Msa0923320:CDS |
| TGAATTCCTTGAAGGTTGCT+GGG | 0.470554 | 6_2:-63422075 | None:intergenic |
| CCTTCACTTAATGTCTCTGC+TGG | 0.473944 | 6_2:+63418400 | Msa0923320:CDS |
| AGCACTTATTAGTACCATCA+TGG | 0.474614 | 6_2:+63418278 | Msa0923320:CDS |
| TTCTACACTTTATATTGGTG+TGG | 0.475325 | 6_2:+63421933 | Msa0923320:CDS |
| TGGTCTATACAACTTTGTTA+AGG | 0.481791 | 6_2:+63422348 | Msa0923320:CDS |
| AGTTTCATTTCATAATCCTT+GGG | 0.482837 | 6_2:+63418059 | Msa0923320:five_prime_UTR |
| TACACAATTGCGTAGGGCGC+AGG | 0.485555 | 6_2:-63422982 | None:intergenic |
| AGTATCAACCCTATCATTTG+TGG | 0.485819 | 6_2:-63423382 | None:intergenic |
| ATGTTTGTGAGCCAAATAAT+CGG | 0.487642 | 6_2:+63422871 | Msa0923320:CDS |
| GGAGAGTCTTGATCCGCAAC+AGG | 0.487808 | 6_2:-63422436 | None:intergenic |
| CTTGGAGGAGTTCTTTCTTG+GGG | 0.488944 | 6_2:+63421994 | Msa0923320:CDS |
| CTTGGTCCCAGCAACCTTCA+AGG | 0.489296 | 6_2:+63422069 | Msa0923320:CDS |
| AGGATTCGGTTGGTAAGGTA+GGG | 0.489321 | 6_2:+63423112 | Msa0923320:CDS |
| ATACTTGGAGTACAAGGATT+CGG | 0.491748 | 6_2:+63423018 | Msa0923320:CDS |
| ATGAAACTTAATCTTACTAC+TGG | 0.492220 | 6_2:+63418370 | Msa0923320:CDS |
| CCAAATAATCGGAACAACAA+TGG | 0.495641 | 6_2:+63422882 | Msa0923320:CDS |
| ATAGTAGTATAGTTGTACTT+TGG | 0.498587 | 6_2:-63418020 | None:intergenic |
| GATTATTTGGCTCACAAACA+TGG | 0.504020 | 6_2:-63422869 | None:intergenic |
| ATCAATATATCAGTTCTCCT+TGG | 0.505110 | 6_2:+63421976 | Msa0923320:CDS |
| GATTAAGGATTCGGTTGGTA+AGG | 0.506556 | 6_2:+63423107 | Msa0923320:CDS |
| AAAGGTATTGCCATAGCCAT+TGG | 0.509985 | 6_2:-63423150 | None:intergenic |
| CATTCCACTTCCAATGGCTA+TGG | 0.510484 | 6_2:+63423140 | Msa0923320:CDS |
| ATAGCCATAGCCATGATCCT+TGG | 0.513227 | 6_2:+63422322 | Msa0923320:CDS |
| TCTACACTTTATATTGGTGT+GGG | 0.513632 | 6_2:+63421934 | Msa0923320:CDS |
| CATCTGCCCTTCGTTTGTCC+CGG | 0.515709 | 6_2:-63422408 | None:intergenic |
| CAAAGCAAGAGGCAGTTATC+CGG | 0.520774 | 6_2:-63423048 | None:intergenic |
| AAAAGAGCAAGTATTGAAGC+AGG | 0.521563 | 6_2:-63423318 | None:intergenic |
| TTCTCATTCCCTTGAATCGG+AGG | 0.523317 | 6_2:-63423708 | None:intergenic |
| ATTGCCATAGCCATTGGAAG+TGG | 0.525116 | 6_2:-63423144 | None:intergenic |
| AAATAAGGTCCTAAATAGAA+AGG | 0.525642 | 6_2:-63423168 | None:intergenic |
| ACTTCCAACACACATGTCAA+TGG | 0.526506 | 6_2:-63423193 | None:intergenic |
| AATATATCAGTTCTCCTTGG+AGG | 0.527231 | 6_2:+63421979 | Msa0923320:CDS |
| TTCTTTCTTGGGGAGTAATG+TGG | 0.528506 | 6_2:+63422004 | Msa0923320:CDS |
| TAGACCATCTCCAAGGATCA+TGG | 0.531309 | 6_2:-63422332 | None:intergenic |
| TGGGTTTGTATAGTCAACTC+CGG | 0.531616 | 6_2:+63422389 | Msa0923320:CDS |
| TTTGCTAGTTTAGCTCCTTG+AGG | 0.534615 | 6_2:-63421473 | None:intergenic |
| GTCTTAACCCTCCGATTCAA+GGG | 0.535458 | 6_2:+63423700 | Msa0923320:three_prime_UTR |
| ATCTCCAAGGATCATGGCTA+TGG | 0.539270 | 6_2:-63422326 | None:intergenic |
| TGAAGCCAGGGTAAGGTAGC+CGG | 0.539696 | 6_2:-63422839 | None:intergenic |
| ATTGAAAATTTGGTGTTCAG+AGG | 0.539867 | 6_2:-63423663 | None:intergenic |
| TGGTTCTATACAGCTGCTGA+TGG | 0.540404 | 6_2:+63421657 | Msa0923320:CDS |
| CTTAAAATCACTAGTGTCTG+AGG | 0.541585 | 6_2:-63420773 | None:intergenic |
| CGCAATTGTGTACCGCAACA+TGG | 0.541936 | 6_2:+63422993 | Msa0923320:CDS |
| CCCTCTCTGGTTTCTATGAG+AGG | 0.542261 | 6_2:-63422027 | None:intergenic |
| TATGCTTTGAGTCCTAATGA+AGG | 0.546514 | 6_2:-63421699 | None:intergenic |
| TTTGCATGAAGTTCTTGTCA+AGG | 0.546663 | 6_2:+63423358 | Msa0923320:CDS |
| TGAGCAGTTGCAGTACCACT+TGG | 0.550234 | 6_2:-63421428 | None:intergenic |
| ATGGCAATACTTGGAGTACA+AGG | 0.550661 | 6_2:+63423012 | Msa0923320:CDS |
| TTAAGGATCCAAAGTTGGGA+TGG | 0.551545 | 6_2:+63420791 | Msa0923320:CDS |
| CAAAACCGGCTACCTTACCC+TGG | 0.553851 | 6_2:+63422834 | Msa0923320:CDS |
| TAATAATGAGCATGAAGATA+GGG | 0.554096 | 6_2:+63418123 | Msa0923320:CDS |
| ATCGTGGTGAAGCCAGGGTA+AGG | 0.556646 | 6_2:-63422846 | None:intergenic |
| GCGTGGGCTGGTGCATCACA+TGG | 0.556664 | 6_2:+63422733 | Msa0923320:CDS |
| GTTTAGCTCCTTGAGGAGTG+TGG | 0.557065 | 6_2:-63421466 | None:intergenic |
| TCTGGTTTGATATGTGGTGA+TGG | 0.557129 | 6_2:+63423282 | Msa0923320:CDS |
| AACAGCTTCCACACTCCTCA+AGG | 0.557684 | 6_2:+63421458 | Msa0923320:CDS |
| TGGTCCCTAGCATCAACCTA+TGG | 0.558055 | 6_2:+63422685 | Msa0923320:CDS |
| GCATTGCAAAATGCTAAGGT+TGG | 0.558181 | 6_2:-63422640 | None:intergenic |
| GTCAAGGTCCACAAATGATA+GGG | 0.560228 | 6_2:+63423374 | Msa0923320:CDS |
| CATGATTTGATTGTCATTTG+GGG | 0.561390 | 6_2:+63423609 | Msa0923320:three_prime_UTR |
| ATGGTTGTGGACTAACAGAT+TGG | 0.563504 | 6_2:+63422665 | Msa0923320:CDS |
| CCACTAATTGCAAACCATGT+AGG | 0.563777 | 6_2:-63422523 | None:intergenic |
| AACAAAGAGGTTCTAGTACA+AGG | 0.565986 | 6_2:+63418215 | Msa0923320:CDS |
| GGGTTTGTATAGTCAACTCC+GGG | 0.567231 | 6_2:+63422390 | Msa0923320:CDS |
| GAGATTCATTCCACTTCCAA+TGG | 0.567537 | 6_2:+63423134 | Msa0923320:CDS |
| GGAAAAGGTTGACAAGGCTA+AGG | 0.569505 | 6_2:+63423233 | Msa0923320:CDS |
| GGCAGATGCTCTACCTGTTG+CGG | 0.571689 | 6_2:+63422423 | Msa0923320:CDS |
| GTTAACTGATTCCTCCATGA+TGG | 0.571809 | 6_2:-63418292 | None:intergenic |
| TTTGCCATTGACATGTGTGT+TGG | 0.573547 | 6_2:+63423189 | Msa0923320:CDS |
| ATTTGGTTCGGATACTCCCA+AGG | 0.574120 | 6_2:-63418075 | None:intergenic |
| AGAATATATAGCAAAGCAAG+AGG | 0.574745 | 6_2:-63423059 | None:intergenic |
| ATCTGTTAGTCCACAACCAT+AGG | 0.575557 | 6_2:-63422662 | None:intergenic |
| GTCAACTCCGGGACAAACGA+AGG | 0.575818 | 6_2:+63422401 | Msa0923320:CDS |
| CATAAATTGTCACAACAAAG+AGG | 0.576106 | 6_2:+63418202 | Msa0923320:CDS |
| CATGGATCGTGGTGAAGCCA+GGG | 0.577970 | 6_2:-63422851 | None:intergenic |
| TTAAAGATCAGATTCCTACA+TGG | 0.584073 | 6_2:+63422509 | Msa0923320:CDS |
| ATAGGCATTGCAAAATGCTA+AGG | 0.584698 | 6_2:-63422644 | None:intergenic |
| GGTTCTATACAGCTGCTGAT+GGG | 0.586315 | 6_2:+63421658 | Msa0923320:CDS |
| GATGTTCATCATGACTCCGC+AGG | 0.591634 | 6_2:-63422779 | None:intergenic |
| TTTGAGTCCTAATGAAGGGA+AGG | 0.592188 | 6_2:-63421694 | None:intergenic |
| CTTGCTAGTCTTGCAGCCTG+CGG | 0.595048 | 6_2:+63422763 | Msa0923320:CDS |
| AACTTGATTAAGGATTCGGT+TGG | 0.598409 | 6_2:+63423102 | Msa0923320:CDS |
| ACACAATTGCGTAGGGCGCA+GGG | 0.599414 | 6_2:-63422981 | None:intergenic |
| TCTCATTCCCTTGAATCGGA+GGG | 0.600484 | 6_2:-63423707 | None:intergenic |
| TCAAGGAATTCAAGGTTACA+GGG | 0.602818 | 6_2:+63422086 | Msa0923320:CDS |
| GTAAGATAACTCAGGACTCG+AGG | 0.605381 | 6_2:-63422458 | None:intergenic |
| GTTGCGGTACACAATTGCGT+AGG | 0.606009 | 6_2:-63422989 | None:intergenic |
| ATGCTTTGAGTCCTAATGAA+GGG | 0.608080 | 6_2:-63421698 | None:intergenic |
| TACAAAGCATTTCCTGACCT+AGG | 0.612341 | 6_2:+63422940 | Msa0923320:CDS |
| ATCAAACCAGAAGCAACAGC+AGG | 0.613290 | 6_2:-63423270 | None:intergenic |
| AAGAACTTCATGCAAATAGG+AGG | 0.617407 | 6_2:-63423351 | None:intergenic |
| TTGCTATATATTCTTTGGCG+CGG | 0.619642 | 6_2:+63423068 | Msa0923320:CDS |
| CTCCAAGTATTGCCATGTTG+CGG | 0.619735 | 6_2:-63423005 | None:intergenic |
| CCCAAGAAAGAACTCCTCCA+AGG | 0.622090 | 6_2:-63421993 | None:intergenic |
| ATAGCCATGATCCTTGGAGA+TGG | 0.623397 | 6_2:+63422328 | Msa0923320:CDS |
| GAAGATAGGGTAGTTGACAA+TGG | 0.624032 | 6_2:+63418136 | Msa0923320:CDS |
| TGTTTGGGAAAAGGTTGACA+AGG | 0.624033 | 6_2:+63423227 | Msa0923320:CDS |
| TTGCGGTACACAATTGCGTA+GGG | 0.624590 | 6_2:-63422988 | None:intergenic |
| TGATCATCGTAAGATAACTC+AGG | 0.626341 | 6_2:-63422466 | None:intergenic |
| TAAGATAACTCAGGACTCGA+GGG | 0.628178 | 6_2:-63422457 | None:intergenic |
| TTTAGTTGAGGGAAGATGTG+CGG | 0.628491 | 6_2:-63422583 | None:intergenic |
| TATCTTACGATGATCAGCGC+CGG | 0.641527 | 6_2:+63422473 | Msa0923320:CDS |
| TCAACTCCGGGACAAACGAA+GGG | 0.644762 | 6_2:+63422402 | Msa0923320:CDS |
| TTCAAATTGACATATCCAAG+TGG | 0.649978 | 6_2:+63421413 | Msa0923320:CDS |
| CCAGCAGAGACATTAAGTGA+AGG | 0.650274 | 6_2:-63418400 | None:intergenic |
| AGGGAAGATGTGCGGCAATG+TGG | 0.666147 | 6_2:-63422575 | None:intergenic |
| ATCTTAAGGATCTAAAGACA+TGG | 0.673015 | 6_2:+63418096 | Msa0923320:exon |
| AGTTGTATAGACCATCTCCA+AGG | 0.673257 | 6_2:-63422339 | None:intergenic |
| TAGAAAATCCAAAAGACACA+AGG | 0.677007 | 6_2:-63422919 | None:intergenic |
| TGGCTCACAAACATGGATCG+TGG | 0.685246 | 6_2:-63422862 | None:intergenic |
| TGGGCTGGTGCATCACATGG+TGG | 0.687327 | 6_2:+63422736 | Msa0923320:CDS |
| GCCTCTCATAGAAACCAGAG+AGG | 0.722428 | 6_2:+63422026 | Msa0923320:CDS |
| CCTCTCATAGAAACCAGAGA+GGG | 0.726173 | 6_2:+63422027 | Msa0923320:CDS |
| ACTTATTAGTACCATCATGG+AGG | 0.730761 | 6_2:+63418281 | Msa0923320:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATCTAAATTTATTTATTTGT+AGG | + | chr6_2:63421896-63421915 | Msa0923320:intron | 10.0% |
| !! | TAAAAAAAAAATGCTTATCA+TGG | - | chr6_2:63418655-63418674 | None:intergenic | 15.0% |
| !! | ATAATCAAATCATAGTAATA+AGG | - | chr6_2:63418710-63418729 | None:intergenic | 15.0% |
| !!! | TAGTAATTTTGAAAATGATA+AGG | + | chr6_2:63419000-63419019 | Msa0923320:intron | 15.0% |
| !! | TAATTCTTCAAAGAAAATTA+GGG | + | chr6_2:63419133-63419152 | Msa0923320:intron | 15.0% |
| !!! | TTAATTTTTCTGATTATGAT+AGG | + | chr6_2:63419606-63419625 | Msa0923320:intron | 15.0% |
| !! | TTAATATATATTGCTATGTA+GGG | - | chr6_2:63420039-63420058 | None:intergenic | 15.0% |
| !! | ATTAATATATATTGCTATGT+AGG | - | chr6_2:63420040-63420059 | None:intergenic | 15.0% |
| !! | ATAGCAATATATATTAATGA+GGG | + | chr6_2:63420042-63420061 | Msa0923320:intron | 15.0% |
| !!! | TATAAAGTATTGTCAAATAA+TGG | + | chr6_2:63420347-63420366 | Msa0923320:intron | 15.0% |
| !! | ATCACAGTTATTAAAAATAT+AGG | + | chr6_2:63420545-63420564 | Msa0923320:intron | 15.0% |
| !! | ACAATTAATTTCATCAAATT+AGG | - | chr6_2:63420683-63420702 | None:intergenic | 15.0% |
| !! | AAGTAATTTAATATAGGATT+TGG | - | chr6_2:63421249-63421268 | None:intergenic | 15.0% |
| !! | AAATGCAAGTAATTTAATAT+AGG | - | chr6_2:63421255-63421274 | None:intergenic | 15.0% |
| !! | AATCTATACTTATATAGAAA+TGG | + | chr6_2:63421791-63421810 | Msa0923320:intron | 15.0% |
| !! | TATTTGTCTCATTATAATTT+GGG | + | chr6_2:63421867-63421886 | Msa0923320:intron | 15.0% |
| !!! | TAATTAATCGTACTTTTTTA+AGG | + | chr6_2:63422249-63422268 | Msa0923320:intron | 15.0% |
| !! | TCTTAGGAAATTAATTAATT+AGG | + | chr6_2:63423406-63423425 | Msa0923320:exon | 15.0% |
| !!! | ATTTGAAATAAAGATGTTTT+AGG | - | chr6_2:63423637-63423656 | None:intergenic | 15.0% |
| !! | ATCATGATATCATAGTAAAA+AGG | - | chr6_2:63418611-63418630 | None:intergenic | 20.0% |
| !! | CTAATTCTTCAAAGAAAATT+AGG | + | chr6_2:63419132-63419151 | Msa0923320:intron | 20.0% |
| !! | ATCTTATGAAAACAGTTAAT+AGG | + | chr6_2:63419220-63419239 | Msa0923320:intron | 20.0% |
| !!! | AATCTGTATTTTTCAAAGTA+TGG | - | chr6_2:63419502-63419521 | None:intergenic | 20.0% |
| !!! | AGATTTTTCTATATTTTCCA+TGG | + | chr6_2:63419517-63419536 | Msa0923320:intron | 20.0% |
| !!! | ACATAAATTTTCAAAGTTCT+TGG | - | chr6_2:63419554-63419573 | None:intergenic | 20.0% |
| !!! | AAGAACTTTGAAAATTTATG+TGG | + | chr6_2:63419553-63419572 | Msa0923320:intron | 20.0% |
| !! | AAATTAAATACTGTCCAAAT+TGG | - | chr6_2:63419593-63419612 | None:intergenic | 20.0% |
| !!! | AAGTCAAATTATACTACTTT+TGG | + | chr6_2:63419646-63419665 | Msa0923320:intron | 20.0% |
| !! | CATAGCAATATATATTAATG+AGG | + | chr6_2:63420041-63420060 | Msa0923320:intron | 20.0% |
| !!! | ATATTTTATACCTTTCTAAG+AGG | - | chr6_2:63420868-63420887 | None:intergenic | 20.0% |
| !!! | GCATTTTTTCAAATTATTAC+TGG | + | chr6_2:63421269-63421288 | Msa0923320:intron | 20.0% |
| !! | CTATTTGTCTCATTATAATT+TGG | + | chr6_2:63421866-63421885 | Msa0923320:intron | 20.0% |
| !! | ATTTGTCTCATTATAATTTG+GGG | + | chr6_2:63421868-63421887 | Msa0923320:intron | 20.0% |
| !!! | GATTTTTCTACACTTTATAT+TGG | + | chr6_2:63421928-63421947 | Msa0923320:CDS | 20.0% |
| !!! | ACTGATATATTGATGATATA+TGG | - | chr6_2:63421970-63421989 | None:intergenic | 20.0% |
| !! | AAGTTTGATATTGTTTGTTT+GGG | + | chr6_2:63423212-63423231 | Msa0923320:CDS | 20.0% |
| !!! | AGAAAAAGTATTGTTTTTGT+TGG | + | chr6_2:63423545-63423564 | Msa0923320:three_prime_UTR | 20.0% |
| ! | ATAGTAGTATAGTTGTACTT+TGG | - | chr6_2:63418023-63418042 | None:intergenic | 25.0% |
| ! | AAGTTTCATTTCATAATCCT+TGG | + | chr6_2:63418058-63418077 | Msa0923320:five_prime_UTR | 25.0% |
| ! | AGTTTCATTTCATAATCCTT+GGG | + | chr6_2:63418059-63418078 | Msa0923320:five_prime_UTR | 25.0% |
| ! | ATAATAATGAGCATGAAGAT+AGG | + | chr6_2:63418122-63418141 | Msa0923320:CDS | 25.0% |
| ! | TAATAATGAGCATGAAGATA+GGG | + | chr6_2:63418123-63418142 | Msa0923320:CDS | 25.0% |
| ! | ATGAAACTTAATCTTACTAC+TGG | + | chr6_2:63418370-63418389 | Msa0923320:CDS | 25.0% |
| !! | GATTTTTCTTTGTCAAAACT+TGG | + | chr6_2:63418431-63418450 | Msa0923320:CDS | 25.0% |
| ! | ATCACTTGAATTTAATCACT+TGG | + | chr6_2:63418955-63418974 | Msa0923320:intron | 25.0% |
| !! | TAAGGAATAGTCAAGATTTT+CGG | + | chr6_2:63419018-63419037 | Msa0923320:intron | 25.0% |
| ! | ATACTTATCTCCAACAAATT+AGG | - | chr6_2:63419070-63419089 | None:intergenic | 25.0% |
| !! | AGATAAGTATTTGAGATAAG+AGG | + | chr6_2:63419080-63419099 | Msa0923320:intron | 25.0% |
| !! | GATAAGTATTTGAGATAAGA+GGG | + | chr6_2:63419081-63419100 | Msa0923320:intron | 25.0% |
| !! | ATAAGTATTTGAGATAAGAG+GGG | + | chr6_2:63419082-63419101 | Msa0923320:intron | 25.0% |
| ! | GTATTTACACTATAAGAACT+TGG | + | chr6_2:63419304-63419323 | Msa0923320:intron | 25.0% |
| ! | TCTTATCACTTATATGTTTG+TGG | - | chr6_2:63419967-63419986 | None:intergenic | 25.0% |
| ! | TTGAACAGGAAAAAATATCT+TGG | + | chr6_2:63420190-63420209 | Msa0923320:intron | 25.0% |
| ! | GTATTACAAACTGTTTAATC+TGG | + | chr6_2:63420219-63420238 | Msa0923320:intron | 25.0% |
| !!! | CAAAACTGATTTTAAGTTAC+TGG | + | chr6_2:63420925-63420944 | Msa0923320:intron | 25.0% |
| !! | ACACGTTCAATCTAAAATTT+CGG | - | chr6_2:63420953-63420972 | None:intergenic | 25.0% |
| ! | TTAAATGTTGCCTATGTTAA+TGG | + | chr6_2:63421369-63421388 | Msa0923320:intron | 25.0% |
| ! | TTATCTACATCCATTAACAT+AGG | - | chr6_2:63421382-63421401 | None:intergenic | 25.0% |
| !! | ATGTTAATGGATGTAGATAA+TGG | + | chr6_2:63421382-63421401 | Msa0923320:intron | 25.0% |
| ! | CTTATAGTAAACTTTGAGTA+TGG | - | chr6_2:63421511-63421530 | None:intergenic | 25.0% |
| !!! | TCTTCAGTTTTAGTTTCTTA+TGG | + | chr6_2:63421622-63421641 | Msa0923320:CDS | 25.0% |
| !!! | CTTCAGTTTTAGTTTCTTAT+GGG | + | chr6_2:63421623-63421642 | Msa0923320:CDS | 25.0% |
| !!! | TTCAGTTTTAGTTTCTTATG+GGG | + | chr6_2:63421624-63421643 | Msa0923320:CDS | 25.0% |
| ! | TGAATAGGTTTGATTGAAAA+TGG | - | chr6_2:63421750-63421769 | None:intergenic | 25.0% |
| ! | AATTTCATCTCAAGATGAAT+AGG | - | chr6_2:63421765-63421784 | None:intergenic | 25.0% |
| ! | AGACAAATAGTTTAAACGAA+GGG | - | chr6_2:63421856-63421875 | None:intergenic | 25.0% |
| !!! | TGTAATACCATTTTAGTTGA+GGG | - | chr6_2:63422597-63422616 | None:intergenic | 25.0% |
| !!! | ATGTAATACCATTTTAGTTG+AGG | - | chr6_2:63422598-63422617 | None:intergenic | 25.0% |
| !! | TTGCTTTGCTATATATTCTT+TGG | + | chr6_2:63423063-63423082 | Msa0923320:CDS | 25.0% |
| ! | AAATAAGGTCCTAAATAGAA+AGG | - | chr6_2:63423171-63423190 | None:intergenic | 25.0% |
| ! | GAAGTTTGATATTGTTTGTT+TGG | + | chr6_2:63423211-63423230 | Msa0923320:CDS | 25.0% |
| ! | GGAAATTAATTAATTAGGCT+TGG | + | chr6_2:63423411-63423430 | Msa0923320:exon | 25.0% |
| ! | AACAAAGTGCATTGAAAATT+TGG | - | chr6_2:63423676-63423695 | None:intergenic | 25.0% |
| !!! | TTTTCAATGCACTTTGTTTT+AGG | + | chr6_2:63423678-63423697 | Msa0923320:three_prime_UTR | 25.0% |
| ! | TAGATCCTTAAGATTTGGTT+CGG | - | chr6_2:63418090-63418109 | None:intergenic | 30.0% |
| GTCTTTAGATCCTTAAGATT+TGG | - | chr6_2:63418095-63418114 | None:intergenic | 30.0% | |
| ATCTTAAGGATCTAAAGACA+TGG | + | chr6_2:63418096-63418115 | Msa0923320:exon | 30.0% | |
| CATAAATTGTCACAACAAAG+AGG | + | chr6_2:63418202-63418221 | Msa0923320:CDS | 30.0% | |
| ! | CAAAACTTGGACTAAGTTTT+TGG | + | chr6_2:63418444-63418463 | Msa0923320:CDS | 30.0% |
| GTATTCTCTTGTCTAGTAAA+AGG | - | chr6_2:63418493-63418512 | None:intergenic | 30.0% | |
| ! | TTCTTTTCTCATAAAACAGG+AGG | - | chr6_2:63418826-63418845 | None:intergenic | 30.0% |
| ! | CAGTTCTTTTCTCATAAAAC+AGG | - | chr6_2:63418829-63418848 | None:intergenic | 30.0% |
| AGAAAAGAACTGTTGTATTC+TGG | + | chr6_2:63418837-63418856 | Msa0923320:intron | 30.0% | |
| ! | TCTACAGTATCCTAATTTGT+TGG | + | chr6_2:63419057-63419076 | Msa0923320:intron | 30.0% |
| AAAGAAAATTAGGGCATGTT+TGG | + | chr6_2:63419142-63419161 | Msa0923320:intron | 30.0% | |
| TAGTCAAATATGTACTACTG+TGG | + | chr6_2:63419358-63419377 | Msa0923320:intron | 30.0% | |
| GTTATCAATATTTCACTGTC+TGG | + | chr6_2:63419418-63419437 | Msa0923320:intron | 30.0% | |
| CTGTATTTATGAGTCCAATT+TGG | + | chr6_2:63419576-63419595 | Msa0923320:intron | 30.0% | |
| ! | ATGTATGATGTAACCCATTT+TGG | + | chr6_2:63419716-63419735 | Msa0923320:intron | 30.0% |
| AATCAAACTAAGACCTAAAG+AGG | - | chr6_2:63419785-63419804 | None:intergenic | 30.0% | |
| TAGAGAAGAAAAAATCGTTG+TGG | - | chr6_2:63419928-63419947 | None:intergenic | 30.0% | |
| ! | TTTTTCTTCTCTACGTATCT+CGG | + | chr6_2:63419935-63419954 | Msa0923320:intron | 30.0% |
| !! | GGATTTATTTTCAGTGGAAA+TGG | - | chr6_2:63420161-63420180 | None:intergenic | 30.0% |
| TTGTCAAATAATGGCTATAG+TGG | + | chr6_2:63420356-63420375 | Msa0923320:intron | 30.0% | |
| ! | TCCTAAGTACTGTCAAATAA+TGG | + | chr6_2:63420444-63420463 | Msa0923320:intron | 30.0% |
| TTTGATGTTACACATGTGAA+AGG | + | chr6_2:63420601-63420620 | Msa0923320:intron | 30.0% | |
| !! | TGATTTTAAGGATCCAAAGT+TGG | + | chr6_2:63420786-63420805 | Msa0923320:CDS | 30.0% |
| !! | GATTTTAAGGATCCAAAGTT+GGG | + | chr6_2:63420787-63420806 | Msa0923320:CDS | 30.0% |
| !!! | TCTCTTTGTTGTTAGCTTTT+TGG | + | chr6_2:63420825-63420844 | Msa0923320:CDS | 30.0% |
| !!! | CTCTTTGTTGTTAGCTTTTT+GGG | + | chr6_2:63420826-63420845 | Msa0923320:CDS | 30.0% |
| CACATGTGATTATATGGATT+TGG | + | chr6_2:63421014-63421033 | Msa0923320:intron | 30.0% | |
| ACAGTTGAATCAAAATCAGA+TGG | + | chr6_2:63421087-63421106 | Msa0923320:intron | 30.0% | |
| ACATAGGCAACATTTAATCA+AGG | - | chr6_2:63421366-63421385 | None:intergenic | 30.0% | |
| TTCAAATTGACATATCCAAG+TGG | + | chr6_2:63421413-63421432 | Msa0923320:CDS | 30.0% | |
| !! | TTTTCCTTTTCTACTTTTCC+AGG | + | chr6_2:63421574-63421593 | Msa0923320:intron | 30.0% |
| GAGACAAATAGTTTAAACGA+AGG | - | chr6_2:63421857-63421876 | None:intergenic | 30.0% | |
| TTCTACACTTTATATTGGTG+TGG | + | chr6_2:63421933-63421952 | Msa0923320:CDS | 30.0% | |
| TCTACACTTTATATTGGTGT+GGG | + | chr6_2:63421934-63421953 | Msa0923320:CDS | 30.0% | |
| ATCAATATATCAGTTCTCCT+TGG | + | chr6_2:63421976-63421995 | Msa0923320:CDS | 30.0% | |
| GATTAATTACATTCAGTGGA+TGG | - | chr6_2:63422238-63422257 | None:intergenic | 30.0% | |
| GTACGATTAATTACATTCAG+TGG | - | chr6_2:63422242-63422261 | None:intergenic | 30.0% | |
| GTAAGGTGAAGCAAATTAAA+GGG | - | chr6_2:63422279-63422298 | None:intergenic | 30.0% | |
| TGTAAGGTGAAGCAAATTAA+AGG | - | chr6_2:63422280-63422299 | None:intergenic | 30.0% | |
| TGGTCTATACAACTTTGTTA+AGG | + | chr6_2:63422348-63422367 | Msa0923320:CDS | 30.0% | |
| TTGACTATACAAACCCAATA+AGG | - | chr6_2:63422386-63422405 | None:intergenic | 30.0% | |
| ! | CTTTAAGAAAGAGTTGTTTC+CGG | - | chr6_2:63422495-63422514 | None:intergenic | 30.0% |
| TTAAAGATCAGATTCCTACA+TGG | + | chr6_2:63422509-63422528 | Msa0923320:CDS | 30.0% | |
| !! | AAACTAGCCATTTTCTCAAT+CGG | + | chr6_2:63422709-63422728 | Msa0923320:CDS | 30.0% |
| CTTATGCAAGATTTCAAAAC+CGG | + | chr6_2:63422820-63422839 | Msa0923320:CDS | 30.0% | |
| ATGTTTGTGAGCCAAATAAT+CGG | + | chr6_2:63422871-63422890 | Msa0923320:CDS | 30.0% | |
| CAAATAATCGGAACAACAAT+GGG | + | chr6_2:63422883-63422902 | Msa0923320:CDS | 30.0% | |
| ! | TAATTTCACCTTGTGTCTTT+TGG | + | chr6_2:63422911-63422930 | Msa0923320:CDS | 30.0% |
| TAGAAAATCCAAAAGACACA+AGG | - | chr6_2:63422922-63422941 | None:intergenic | 30.0% | |
| !! | ATTGACTTTTATGTGTTCCT+AGG | - | chr6_2:63422960-63422979 | None:intergenic | 30.0% |
| AGAATATATAGCAAAGCAAG+AGG | - | chr6_2:63423062-63423081 | None:intergenic | 30.0% | |
| GATTGTGGTAAACTTGATTA+AGG | + | chr6_2:63423092-63423111 | Msa0923320:CDS | 30.0% | |
| GGTAAACTTGATTAAGGATT+CGG | + | chr6_2:63423098-63423117 | Msa0923320:CDS | 30.0% | |
| ATGGCAATACCTTTCTATTT+AGG | + | chr6_2:63423159-63423178 | Msa0923320:CDS | 30.0% | |
| GATATTGTTTGTTTGGGAAA+AGG | + | chr6_2:63423218-63423237 | Msa0923320:CDS | 30.0% | |
| TGCATGATTTGATTGTCATT+TGG | + | chr6_2:63423607-63423626 | Msa0923320:three_prime_UTR | 30.0% | |
| ! | GCATGATTTGATTGTCATTT+GGG | + | chr6_2:63423608-63423627 | Msa0923320:three_prime_UTR | 30.0% |
| ! | CATGATTTGATTGTCATTTG+GGG | + | chr6_2:63423609-63423628 | Msa0923320:three_prime_UTR | 30.0% |
| !! | ATTGAAAATTTGGTGTTCAG+AGG | - | chr6_2:63423666-63423685 | None:intergenic | 30.0% |
| AGTATCCGAACCAAATCTTA+AGG | + | chr6_2:63418082-63418101 | Msa0923320:five_prime_UTR | 35.0% | |
| ! | AACAAAGAGGTTCTAGTACA+AGG | + | chr6_2:63418215-63418234 | Msa0923320:CDS | 35.0% |
| AGCACTTATTAGTACCATCA+TGG | + | chr6_2:63418278-63418297 | Msa0923320:CDS | 35.0% | |
| ACTTATTAGTACCATCATGG+AGG | + | chr6_2:63418281-63418300 | Msa0923320:CDS | 35.0% | |
| !!! | TCTTCTGGAATTGCTTTTAG+TGG | + | chr6_2:63418538-63418557 | Msa0923320:CDS | 35.0% |
| ! | TTTTGACCGTAAGTAAAGTC+TGG | + | chr6_2:63418861-63418880 | Msa0923320:intron | 35.0% |
| CATTGACCAGACTTTACTTA+CGG | - | chr6_2:63418870-63418889 | None:intergenic | 35.0% | |
| TTTCTGTCAGGATTAGAACT+CGG | + | chr6_2:63418894-63418913 | Msa0923320:intron | 35.0% | |
| ! | GGTTGTCTCGAAGTATTTAT+CGG | + | chr6_2:63418916-63418935 | Msa0923320:intron | 35.0% |
| AAATTAGGGCATGTTTGGAT+TGG | + | chr6_2:63419147-63419166 | Msa0923320:intron | 35.0% | |
| GTAGTACATATTTGACTAGC+TGG | - | chr6_2:63419356-63419375 | None:intergenic | 35.0% | |
| ! | TGTCTGGAATATATGAACCT+TGG | + | chr6_2:63419434-63419453 | Msa0923320:intron | 35.0% |
| !! | TTTTTCCTGTTGCTATTCCA+AGG | - | chr6_2:63419454-63419473 | None:intergenic | 35.0% |
| CTGATTATGATAGGAGTAGA+AGG | + | chr6_2:63419615-63419634 | Msa0923320:intron | 35.0% | |
| ! | ATTCTCTCTGGTGTCAATTT+CGG | + | chr6_2:63419802-63419821 | Msa0923320:intron | 35.0% |
| AGAAGAAAAAATCGTTGTGG+CGG | - | chr6_2:63419925-63419944 | None:intergenic | 35.0% | |
| TGGAAACAAATTCCCTCATA+AGG | - | chr6_2:63420141-63420160 | None:intergenic | 35.0% | |
| TCCACTGAAAATAAATCCTG+TGG | + | chr6_2:63420163-63420182 | Msa0923320:intron | 35.0% | |
| !! | TCCACAGGATTTATTTTCAG+TGG | - | chr6_2:63420167-63420186 | None:intergenic | 35.0% |
| ! | CTATTTGACAACACTGACTA+TGG | - | chr6_2:63420258-63420277 | None:intergenic | 35.0% |
| TAGTCAGTGTTGTCAAATAG+CGG | + | chr6_2:63420258-63420277 | Msa0923320:intron | 35.0% | |
| GCCATTATTTGACAGTACTT+AGG | - | chr6_2:63420448-63420467 | None:intergenic | 35.0% | |
| TGTGATTCACTTGTATGAAC+AGG | + | chr6_2:63420700-63420719 | Msa0923320:intron | 35.0% | |
| GGATTTGGAAGTTACCTATT+TGG | + | chr6_2:63420724-63420743 | Msa0923320:CDS | 35.0% | |
| CATGTTCACTCATACCAAAT+AGG | - | chr6_2:63420741-63420760 | None:intergenic | 35.0% | |
| CTTAAAATCACTAGTGTCTG+AGG | - | chr6_2:63420776-63420795 | None:intergenic | 35.0% | |
| ! | CTCAGACACTAGTGATTTTA+AGG | + | chr6_2:63420774-63420793 | Msa0923320:CDS | 35.0% |
| GTGTCACATCATTGTTTAAC+AGG | - | chr6_2:63420992-63421011 | None:intergenic | 35.0% | |
| ACACGACACATGTGATTATA+TGG | + | chr6_2:63421008-63421027 | Msa0923320:intron | 35.0% | |
| ATATGGATTTGGATTGTCTG+CGG | + | chr6_2:63421025-63421044 | Msa0923320:intron | 35.0% | |
| TAGTCACGTTGTTAGTACAT+TGG | - | chr6_2:63421202-63421221 | None:intergenic | 35.0% | |
| AGGAAGCAAGTGAAATTGTT+GGG | + | chr6_2:63421594-63421613 | Msa0923320:intron | 35.0% | |
| TCTTATGGGGTTTCTTTCAA+TGG | + | chr6_2:63421637-63421656 | Msa0923320:CDS | 35.0% | |
| ! | ATGCTTTGAGTCCTAATGAA+GGG | - | chr6_2:63421701-63421720 | None:intergenic | 35.0% |
| ! | TATGCTTTGAGTCCTAATGA+AGG | - | chr6_2:63421702-63421721 | None:intergenic | 35.0% |
| AATATATCAGTTCTCCTTGG+AGG | + | chr6_2:63421979-63421998 | Msa0923320:CDS | 35.0% | |
| TGTAACCTTGAATTCCTTGA+AGG | - | chr6_2:63422086-63422105 | None:intergenic | 35.0% | |
| TTCAAGGAATTCAAGGTTAC+AGG | + | chr6_2:63422085-63422104 | Msa0923320:CDS | 35.0% | |
| TCAAGGAATTCAAGGTTACA+GGG | + | chr6_2:63422086-63422105 | Msa0923320:CDS | 35.0% | |
| TGTGTTCAAATATGCAGTAG+AGG | - | chr6_2:63422140-63422159 | None:intergenic | 35.0% | |
| AAATCGTGCTTGACTGTATT+CGG | + | chr6_2:63422163-63422182 | Msa0923320:intron | 35.0% | |
| TAAATACCTGCAGAACTCAA+TGG | - | chr6_2:63422303-63422322 | None:intergenic | 35.0% | |
| GTGCTAACTCATACCTTATT+GGG | + | chr6_2:63422370-63422389 | Msa0923320:CDS | 35.0% | |
| TGATCATCGTAAGATAACTC+AGG | - | chr6_2:63422469-63422488 | None:intergenic | 35.0% | |
| ACATCTTCCCTCAACTAAAA+TGG | + | chr6_2:63422587-63422606 | Msa0923320:CDS | 35.0% | |
| ! | ATAGGCATTGCAAAATGCTA+AGG | - | chr6_2:63422647-63422666 | None:intergenic | 35.0% |
| ! | TTAGCATTTTGCAATGCCTA+TGG | + | chr6_2:63422646-63422665 | Msa0923320:CDS | 35.0% |
| !!! | TTTTCCATAGGTTGATGCTA+GGG | - | chr6_2:63422692-63422711 | None:intergenic | 35.0% |
| !!! | GAAAATGGCTAGTTTTCCAT+AGG | - | chr6_2:63422704-63422723 | None:intergenic | 35.0% |
| ! | GATTATTTGGCTCACAAACA+TGG | - | chr6_2:63422872-63422891 | None:intergenic | 35.0% |
| ! | CCATTGTTGTTCCGATTATT+TGG | - | chr6_2:63422885-63422904 | None:intergenic | 35.0% |
| CCAAATAATCGGAACAACAA+TGG | + | chr6_2:63422882-63422901 | Msa0923320:CDS | 35.0% | |
| TTGCTATATATTCTTTGGCG+CGG | + | chr6_2:63423068-63423087 | Msa0923320:CDS | 35.0% | |
| ! | AACTTGATTAAGGATTCGGT+TGG | + | chr6_2:63423102-63423121 | Msa0923320:CDS | 35.0% |
| CACATGTCAATGGCAAAATA+AGG | - | chr6_2:63423186-63423205 | None:intergenic | 35.0% | |
| !! | TGATATGTGGTGATGGAATA+TGG | + | chr6_2:63423289-63423308 | Msa0923320:CDS | 35.0% |
| !! | AAAAGAGCAAGTATTGAAGC+AGG | - | chr6_2:63423321-63423340 | None:intergenic | 35.0% |
| ! | GCTTCAATACTTGCTCTTTT+TGG | + | chr6_2:63423321-63423340 | Msa0923320:CDS | 35.0% |
| AAGAACTTCATGCAAATAGG+AGG | - | chr6_2:63423354-63423373 | None:intergenic | 35.0% | |
| GACAAGAACTTCATGCAAAT+AGG | - | chr6_2:63423357-63423376 | None:intergenic | 35.0% | |
| TTTGCATGAAGTTCTTGTCA+AGG | + | chr6_2:63423358-63423377 | Msa0923320:CDS | 35.0% | |
| AGTATCAACCCTATCATTTG+TGG | - | chr6_2:63423385-63423404 | None:intergenic | 35.0% | |
| !! | GATAGGGTTGATACTTTCTT+AGG | + | chr6_2:63423390-63423409 | Msa0923320:CDS | 35.0% |
| GAAGATAGGGTAGTTGACAA+TGG | + | chr6_2:63418136-63418155 | Msa0923320:CDS | 40.0% | |
| ! | GTTAACTGATTCCTCCATGA+TGG | - | chr6_2:63418295-63418314 | None:intergenic | 40.0% |
| !!! | TAATGTCTCTGCTGGTCTTT+TGG | + | chr6_2:63418408-63418427 | Msa0923320:CDS | 40.0% |
| !!! | AATGTCTCTGCTGGTCTTTT+GGG | + | chr6_2:63418409-63418428 | Msa0923320:CDS | 40.0% |
| ! | ACTTGTGTTGTTGCTTCTTC+TGG | + | chr6_2:63418523-63418542 | Msa0923320:CDS | 40.0% |
| !! | GGTCAATGATTGTTTCTGTC+AGG | + | chr6_2:63418882-63418901 | Msa0923320:intron | 40.0% |
| TTCTGTCAGGATTAGAACTC+GGG | + | chr6_2:63418895-63418914 | Msa0923320:intron | 40.0% | |
| ATGAACCTTGGAATAGCAAC+AGG | + | chr6_2:63419446-63419465 | Msa0923320:intron | 40.0% | |
| TCTTGGTATAAGCTGAACCA+TGG | - | chr6_2:63419537-63419556 | None:intergenic | 40.0% | |
| !!! | GTAACCCATTTTGGTTGATC+TGG | + | chr6_2:63419725-63419744 | Msa0923320:intron | 40.0% |
| ACCACCAGATCAACCAAAAT+GGG | - | chr6_2:63419732-63419751 | None:intergenic | 40.0% | |
| ! | GGTCTTAGTTTGATTCTCTC+TGG | + | chr6_2:63419790-63419809 | Msa0923320:intron | 40.0% |
| ATTGCTATGTAGGGCTATGA+GGG | - | chr6_2:63420030-63420049 | None:intergenic | 40.0% | |
| TATTGCTATGTAGGGCTATG+AGG | - | chr6_2:63420031-63420050 | None:intergenic | 40.0% | |
| ! | GTGTTGCTGTAATCATCTTG+AGG | + | chr6_2:63420064-63420083 | Msa0923320:intron | 40.0% |
| TTGCTGTAATCATCTTGAGG+AGG | + | chr6_2:63420067-63420086 | Msa0923320:intron | 40.0% | |
| AAATTCCCTCATAAGGCAAC+CGG | - | chr6_2:63420134-63420153 | None:intergenic | 40.0% | |
| TAGCGACGCAATATCAATCT+AGG | + | chr6_2:63420284-63420303 | Msa0923320:intron | 40.0% | |
| AGCGACGCAATATCAATCTA+GGG | + | chr6_2:63420285-63420304 | Msa0923320:intron | 40.0% | |
| ! | CAATCTAGGGTAGCAGAATT+TGG | + | chr6_2:63420298-63420317 | Msa0923320:intron | 40.0% |
| CAAAGCATGTAGCGAAACAA+TGG | - | chr6_2:63420324-63420343 | None:intergenic | 40.0% | |
| GCAATAGCACTCTAGTATAG+CGG | + | chr6_2:63420476-63420495 | Msa0923320:intron | 40.0% | |
| GTGATCAATGTTGTCAATCG+CGG | - | chr6_2:63420530-63420549 | None:intergenic | 40.0% | |
| GATTCACTTGTATGAACAGG+AGG | + | chr6_2:63420703-63420722 | Msa0923320:intron | 40.0% | |
| CTTGTATGAACAGGAGGATT+TGG | + | chr6_2:63420709-63420728 | Msa0923320:intron | 40.0% | |
| ACTAGTGTCTGAGGATTGAT+TGG | - | chr6_2:63420767-63420786 | None:intergenic | 40.0% | |
| TTAAGGATCCAAAGTTGGGA+TGG | + | chr6_2:63420791-63420810 | Msa0923320:CDS | 40.0% | |
| GCAATTATCCATCCCAACTT+TGG | - | chr6_2:63420802-63420821 | None:intergenic | 40.0% | |
| TTTAACAGGCAATGACGTGT+TGG | - | chr6_2:63420978-63420997 | None:intergenic | 40.0% | |
| !! | ACCATCCGATATTGATTCAG+CGG | + | chr6_2:63421173-63421192 | Msa0923320:intron | 40.0% |
| TCACGTTGTTAGTACATTGG+TGG | - | chr6_2:63421199-63421218 | None:intergenic | 40.0% | |
| GTACTAACAACGTGACTATG+TGG | + | chr6_2:63421204-63421223 | Msa0923320:intron | 40.0% | |
| TAACAACGTGACTATGTGGA+TGG | + | chr6_2:63421208-63421227 | Msa0923320:intron | 40.0% | |
| ! | TTTGCTAGTTTAGCTCCTTG+AGG | - | chr6_2:63421476-63421495 | None:intergenic | 40.0% |
| AAACTTTGAGTATGGTGCAG+TGG | - | chr6_2:63421503-63421522 | None:intergenic | 40.0% | |
| GCTTCCTGGAAAAGTAGAAA+AGG | - | chr6_2:63421581-63421600 | None:intergenic | 40.0% | |
| CAACAATTTCACTTGCTTCC+TGG | - | chr6_2:63421595-63421614 | None:intergenic | 40.0% | |
| CAGGAAGCAAGTGAAATTGT+TGG | + | chr6_2:63421593-63421612 | Msa0923320:intron | 40.0% | |
| TTTCAAGCCTTCCCTTCATT+AGG | + | chr6_2:63421687-63421706 | Msa0923320:CDS | 40.0% | |
| TTTGAGTCCTAATGAAGGGA+AGG | - | chr6_2:63421697-63421716 | None:intergenic | 40.0% | |
| TTCTTTCTTGGGGAGTAATG+TGG | + | chr6_2:63422004-63422023 | Msa0923320:CDS | 40.0% | |
| GAGGGTCATTGGTACAAAAA+AGG | + | chr6_2:63422045-63422064 | Msa0923320:CDS | 40.0% | |
| CATTGGTACAAAAAAGGCCT+TGG | + | chr6_2:63422051-63422070 | Msa0923320:CDS | 40.0% | |
| TGAATTCCTTGAAGGTTGCT+GGG | - | chr6_2:63422078-63422097 | None:intergenic | 40.0% | |
| TTGAATTCCTTGAAGGTTGC+TGG | - | chr6_2:63422079-63422098 | None:intergenic | 40.0% | |
| AGCAACCTTCAAGGAATTCA+AGG | + | chr6_2:63422078-63422097 | Msa0923320:CDS | 40.0% | |
| AGTTGTATAGACCATCTCCA+AGG | - | chr6_2:63422342-63422361 | None:intergenic | 40.0% | |
| GGTGCTAACTCATACCTTAT+TGG | + | chr6_2:63422369-63422388 | Msa0923320:CDS | 40.0% | |
| TGGGTTTGTATAGTCAACTC+CGG | + | chr6_2:63422389-63422408 | Msa0923320:CDS | 40.0% | |
| TAAGATAACTCAGGACTCGA+GGG | - | chr6_2:63422460-63422479 | None:intergenic | 40.0% | |
| CCACTAATTGCAAACCATGT+AGG | - | chr6_2:63422526-63422545 | None:intergenic | 40.0% | |
| ! | CCTACATGGTTTGCAATTAG+TGG | + | chr6_2:63422523-63422542 | Msa0923320:CDS | 40.0% |
| TTTAGTTGAGGGAAGATGTG+CGG | - | chr6_2:63422586-63422605 | None:intergenic | 40.0% | |
| GCATTGCAAAATGCTAAGGT+TGG | - | chr6_2:63422643-63422662 | None:intergenic | 40.0% | |
| ! | TTTTGCAATGCCTATGGTTG+TGG | + | chr6_2:63422652-63422671 | Msa0923320:CDS | 40.0% |
| ATCTGTTAGTCCACAACCAT+AGG | - | chr6_2:63422665-63422684 | None:intergenic | 40.0% | |
| ! | ATGGTTGTGGACTAACAGAT+TGG | + | chr6_2:63422665-63422684 | Msa0923320:CDS | 40.0% |
| !!! | GTTTTCCATAGGTTGATGCT+AGG | - | chr6_2:63422693-63422712 | None:intergenic | 40.0% |
| ! | TACAAAGCATTTCCTGACCT+AGG | + | chr6_2:63422940-63422959 | Msa0923320:CDS | 40.0% |
| ! | CTTTTATGTGTTCCTAGGTC+AGG | - | chr6_2:63422955-63422974 | None:intergenic | 40.0% |
| ! | ACAAGGATTCGGTTCTTTAC+CGG | + | chr6_2:63423029-63423048 | Msa0923320:CDS | 40.0% |
| ! | GATTAAGGATTCGGTTGGTA+AGG | + | chr6_2:63423107-63423126 | Msa0923320:CDS | 40.0% |
| GAGATTCATTCCACTTCCAA+TGG | + | chr6_2:63423134-63423153 | Msa0923320:CDS | 40.0% | |
| !! | AAAGGTATTGCCATAGCCAT+TGG | - | chr6_2:63423153-63423172 | None:intergenic | 40.0% |
| TTTGCCATTGACATGTGTGT+TGG | + | chr6_2:63423189-63423208 | Msa0923320:CDS | 40.0% | |
| ACTTCCAACACACATGTCAA+TGG | - | chr6_2:63423196-63423215 | None:intergenic | 40.0% | |
| TGTTTGGGAAAAGGTTGACA+AGG | + | chr6_2:63423227-63423246 | Msa0923320:CDS | 40.0% | |
| !! | GTTGCTTCTGGTTTGATATG+TGG | + | chr6_2:63423276-63423295 | Msa0923320:CDS | 40.0% |
| ! | TCTGGTTTGATATGTGGTGA+TGG | + | chr6_2:63423282-63423301 | Msa0923320:CDS | 40.0% |
| TGTCAAGGTCCACAAATGAT+AGG | + | chr6_2:63423373-63423392 | Msa0923320:CDS | 40.0% | |
| GTCAAGGTCCACAAATGATA+GGG | + | chr6_2:63423374-63423393 | Msa0923320:CDS | 40.0% | |
| !! | ATTTGGTTCGGATACTCCCA+AGG | - | chr6_2:63418078-63418097 | None:intergenic | 45.0% |
| CCAGCAGAGACATTAAGTGA+AGG | - | chr6_2:63418403-63418422 | None:intergenic | 45.0% | |
| CCTTCACTTAATGTCTCTGC+TGG | + | chr6_2:63418400-63418419 | Msa0923320:CDS | 45.0% | |
| ! | GAGGGGTTTAGTGTTGAACT+TGG | + | chr6_2:63419099-63419118 | Msa0923320:intron | 45.0% |
| !!! | ACCCATTTTGGTTGATCTGG+TGG | + | chr6_2:63419728-63419747 | Msa0923320:intron | 45.0% |
| CACCACCAGATCAACCAAAA+TGG | - | chr6_2:63419733-63419752 | None:intergenic | 45.0% | |
| ! | TTTGGTTGATCTGGTGGTGA+TGG | + | chr6_2:63419734-63419753 | Msa0923320:intron | 45.0% |
| CTAAAGAGGAACACACTCCA+AGG | - | chr6_2:63419771-63419790 | None:intergenic | 45.0% | |
| CTTGGAGTGTGTTCCTCTTT+AGG | + | chr6_2:63419769-63419788 | Msa0923320:intron | 45.0% | |
| AGAAAAAATCGTTGTGGCGG+CGG | - | chr6_2:63419922-63419941 | None:intergenic | 45.0% | |
| TTCTTCTCTACGTATCTCGG+CGG | + | chr6_2:63419938-63419957 | Msa0923320:intron | 45.0% | |
| TGGGTCAAGACATTGGGTTT+AGG | - | chr6_2:63419992-63420011 | None:intergenic | 45.0% | |
| ! | CTAGGTTGGGTCAAGACATT+GGG | - | chr6_2:63419998-63420017 | None:intergenic | 45.0% |
| ! | ACTAGGTTGGGTCAAGACAT+TGG | - | chr6_2:63419999-63420018 | None:intergenic | 45.0% |
| TTGCTATGTAGGGCTATGAG+GGG | - | chr6_2:63420029-63420048 | None:intergenic | 45.0% | |
| CTGTAATCATCTTGAGGAGG+AGG | + | chr6_2:63420070-63420089 | Msa0923320:intron | 45.0% | |
| TTGGTATCACTTATCTGCCC+CGG | + | chr6_2:63420112-63420131 | Msa0923320:intron | 45.0% | |
| AATTCCCTCATAAGGCAACC+GGG | - | chr6_2:63420133-63420152 | None:intergenic | 45.0% | |
| !! | AATCCTGTGGAGCTTTGAAC+AGG | + | chr6_2:63420176-63420195 | Msa0923320:intron | 45.0% |
| TTTCCTGTTCAAAGCTCCAC+AGG | - | chr6_2:63420182-63420201 | None:intergenic | 45.0% | |
| ! | ATGTTGTCAATCGCGGATTG+AGG | - | chr6_2:63420523-63420542 | None:intergenic | 45.0% |
| CTCAGTTGTGCCTCTTAGAA+AGG | + | chr6_2:63420855-63420874 | Msa0923320:CDS | 45.0% | |
| !! | GAGATTACGAAGCATCGACA+CGG | - | chr6_2:63421322-63421341 | None:intergenic | 45.0% |
| ! | TGGTTCTATACAGCTGCTGA+TGG | + | chr6_2:63421657-63421676 | Msa0923320:CDS | 45.0% |
| GGTTCTATACAGCTGCTGAT+GGG | + | chr6_2:63421658-63421677 | Msa0923320:CDS | 45.0% | |
| TCCTTGGAGGAGTTCTTTCT+TGG | + | chr6_2:63421992-63422011 | Msa0923320:CDS | 45.0% | |
| CCTTGGAGGAGTTCTTTCTT+GGG | + | chr6_2:63421993-63422012 | Msa0923320:CDS | 45.0% | |
| CTTGGAGGAGTTCTTTCTTG+GGG | + | chr6_2:63421994-63422013 | Msa0923320:CDS | 45.0% | |
| CCTCTCATAGAAACCAGAGA+GGG | + | chr6_2:63422027-63422046 | Msa0923320:CDS | 45.0% | |
| TAGAAACCAGAGAGGGTCAT+TGG | + | chr6_2:63422034-63422053 | Msa0923320:CDS | 45.0% | |
| TTTGTACCAATGACCCTCTC+TGG | - | chr6_2:63422043-63422062 | None:intergenic | 45.0% | |
| CTGCAGAACTCAATGGTGTA+AGG | - | chr6_2:63422296-63422315 | None:intergenic | 45.0% | |
| CTTACACCATTGAGTTCTGC+AGG | + | chr6_2:63422294-63422313 | Msa0923320:intron | 45.0% | |
| ATAGCCATAGCCATGATCCT+TGG | + | chr6_2:63422322-63422341 | Msa0923320:CDS | 45.0% | |
| ATCTCCAAGGATCATGGCTA+TGG | - | chr6_2:63422329-63422348 | None:intergenic | 45.0% | |
| ATAGCCATGATCCTTGGAGA+TGG | + | chr6_2:63422328-63422347 | Msa0923320:CDS | 45.0% | |
| TAGACCATCTCCAAGGATCA+TGG | - | chr6_2:63422335-63422354 | None:intergenic | 45.0% | |
| GGGTTTGTATAGTCAACTCC+GGG | + | chr6_2:63422390-63422409 | Msa0923320:CDS | 45.0% | |
| GTAAGATAACTCAGGACTCG+AGG | - | chr6_2:63422461-63422480 | None:intergenic | 45.0% | |
| TATCTTACGATGATCAGCGC+CGG | + | chr6_2:63422473-63422492 | Msa0923320:CDS | 45.0% | |
| ATGCTAAGGTTGGAGCAATC+AGG | - | chr6_2:63422633-63422652 | None:intergenic | 45.0% | |
| ! | CATTTTCTCAATCGGAGCGT+GGG | + | chr6_2:63422717-63422736 | Msa0923320:CDS | 45.0% |
| TTGCGGTACACAATTGCGTA+GGG | - | chr6_2:63422991-63423010 | None:intergenic | 45.0% | |
| CAAAGCAAGAGGCAGTTATC+CGG | - | chr6_2:63423051-63423070 | None:intergenic | 45.0% | |
| !! | AAGGATTCGGTTGGTAAGGT+AGG | + | chr6_2:63423111-63423130 | Msa0923320:CDS | 45.0% |
| !! | AGGATTCGGTTGGTAAGGTA+GGG | + | chr6_2:63423112-63423131 | Msa0923320:CDS | 45.0% |
| CATTCCACTTCCAATGGCTA+TGG | + | chr6_2:63423140-63423159 | Msa0923320:CDS | 45.0% | |
| ATTGCCATAGCCATTGGAAG+TGG | - | chr6_2:63423147-63423166 | None:intergenic | 45.0% | |
| GGAAAAGGTTGACAAGGCTA+AGG | + | chr6_2:63423233-63423252 | Msa0923320:CDS | 45.0% | |
| ATCAAACCAGAAGCAACAGC+AGG | - | chr6_2:63423273-63423292 | None:intergenic | 45.0% | |
| !! | TTTATATTTAATTAATAGTT+TGG | + | chr6_2:63419692-63419711 | Msa0923320:intron | 5.0% |
| ! | CTCTCTGGTGTCAATTTCGG+TGG | + | chr6_2:63419805-63419824 | Msa0923320:intron | 50.0% |
| AGAGATGTCAACGTGACAGC+TGG | + | chr6_2:63419869-63419888 | Msa0923320:intron | 50.0% | |
| GAGATGTCAACGTGACAGCT+GGG | + | chr6_2:63419870-63419889 | Msa0923320:intron | 50.0% | |
| AGATGTCAACGTGACAGCTG+GGG | + | chr6_2:63419871-63419890 | Msa0923320:intron | 50.0% | |
| TGTCTTGACCCAACCTAGTG+AGG | + | chr6_2:63420000-63420019 | Msa0923320:intron | 50.0% | |
| TGCTATGTAGGGCTATGAGG+GGG | - | chr6_2:63420028-63420047 | None:intergenic | 50.0% | |
| ATTCCCTCATAAGGCAACCG+GGG | - | chr6_2:63420132-63420151 | None:intergenic | 50.0% | |
| GCCGCTGAATCAATATCGGA+TGG | - | chr6_2:63421177-63421196 | None:intergenic | 50.0% | |
| GGTGGCCGCTGAATCAATAT+CGG | - | chr6_2:63421181-63421200 | None:intergenic | 50.0% | |
| TGAGCAGTTGCAGTACCACT+TGG | - | chr6_2:63421431-63421450 | None:intergenic | 50.0% | |
| AACAGCTTCCACACTCCTCA+AGG | + | chr6_2:63421458-63421477 | Msa0923320:CDS | 50.0% | |
| ! | GTTTAGCTCCTTGAGGAGTG+TGG | - | chr6_2:63421469-63421488 | None:intergenic | 50.0% |
| ! | TATACAGCTGCTGATGGGTG+TGG | + | chr6_2:63421663-63421682 | Msa0923320:CDS | 50.0% |
| CCCAAGAAAGAACTCCTCCA+AGG | - | chr6_2:63421996-63422015 | None:intergenic | 50.0% | |
| GCCTCTCATAGAAACCAGAG+AGG | + | chr6_2:63422026-63422045 | Msa0923320:CDS | 50.0% | |
| ! | CCCTCTCTGGTTTCTATGAG+AGG | - | chr6_2:63422030-63422049 | None:intergenic | 50.0% |
| TCGTGCTTGACTGTATTCGG+TGG | + | chr6_2:63422166-63422185 | Msa0923320:intron | 50.0% | |
| ! | GCTTGACTGTATTCGGTGGA+TGG | + | chr6_2:63422170-63422189 | Msa0923320:intron | 50.0% |
| TCAACTCCGGGACAAACGAA+GGG | + | chr6_2:63422402-63422421 | Msa0923320:CDS | 50.0% | |
| TGGTCCCTAGCATCAACCTA+TGG | + | chr6_2:63422685-63422704 | Msa0923320:CDS | 50.0% | |
| CCACGCTCCGATTGAGAAAA+TGG | - | chr6_2:63422719-63422738 | None:intergenic | 50.0% | |
| ! | CCATTTTCTCAATCGGAGCG+TGG | + | chr6_2:63422716-63422735 | Msa0923320:CDS | 50.0% |
| GATGTTCATCATGACTCCGC+AGG | - | chr6_2:63422782-63422801 | None:intergenic | 50.0% | |
| TGGCTCACAAACATGGATCG+TGG | - | chr6_2:63422865-63422884 | None:intergenic | 50.0% | |
| GTTGCGGTACACAATTGCGT+AGG | - | chr6_2:63422992-63423011 | None:intergenic | 50.0% | |
| CGCAATTGTGTACCGCAACA+TGG | + | chr6_2:63422993-63423012 | Msa0923320:CDS | 50.0% | |
| ! | TTTGCACCTGCTGTTGCTTC+TGG | + | chr6_2:63423264-63423283 | Msa0923320:CDS | 50.0% |
| !! | TCTGGTGGTGATGGCTTGCT+TGG | + | chr6_2:63419743-63419762 | Msa0923320:intron | 55.0% |
| !! | CTGGTGGTGATGGCTTGCTT+GGG | + | chr6_2:63419744-63419763 | Msa0923320:intron | 55.0% |
| !! | TGATGGCTTGCTTGGGACCT+TGG | + | chr6_2:63419751-63419770 | Msa0923320:intron | 55.0% |
| TCATCTTGAGGAGGAGGACC+CGG | + | chr6_2:63420076-63420095 | Msa0923320:intron | 55.0% | |
| CTTGAAGGTTGCTGGGACCA+AGG | - | chr6_2:63422071-63422090 | None:intergenic | 55.0% | |
| CTTGGTCCCAGCAACCTTCA+AGG | + | chr6_2:63422069-63422088 | Msa0923320:CDS | 55.0% | |
| GTCAACTCCGGGACAAACGA+AGG | + | chr6_2:63422401-63422420 | Msa0923320:CDS | 55.0% | |
| CATCTGCCCTTCGTTTGTCC+CGG | - | chr6_2:63422411-63422430 | None:intergenic | 55.0% | |
| GGCAGATGCTCTACCTGTTG+CGG | + | chr6_2:63422423-63422442 | Msa0923320:CDS | 55.0% | |
| GGAGAGTCTTGATCCGCAAC+AGG | - | chr6_2:63422439-63422458 | None:intergenic | 55.0% | |
| AGGGAAGATGTGCGGCAATG+TGG | - | chr6_2:63422578-63422597 | None:intergenic | 55.0% | |
| !! | CTTGCTAGTCTTGCAGCCTG+CGG | + | chr6_2:63422763-63422782 | Msa0923320:CDS | 55.0% |
| CAAAACCGGCTACCTTACCC+TGG | + | chr6_2:63422834-63422853 | Msa0923320:CDS | 55.0% | |
| TGAAGCCAGGGTAAGGTAGC+CGG | - | chr6_2:63422842-63422861 | None:intergenic | 55.0% | |
| ATCGTGGTGAAGCCAGGGTA+AGG | - | chr6_2:63422849-63422868 | None:intergenic | 55.0% | |
| CATGGATCGTGGTGAAGCCA+GGG | - | chr6_2:63422854-63422873 | None:intergenic | 55.0% | |
| ACATGGATCGTGGTGAAGCC+AGG | - | chr6_2:63422855-63422874 | None:intergenic | 55.0% | |
| ACACAATTGCGTAGGGCGCA+GGG | - | chr6_2:63422984-63423003 | None:intergenic | 55.0% | |
| TACACAATTGCGTAGGGCGC+AGG | - | chr6_2:63422985-63423004 | None:intergenic | 55.0% | |
| ATTCTTTGGCGCGGCGATTG+TGG | + | chr6_2:63423077-63423096 | Msa0923320:CDS | 55.0% | |
| TGTCAACGTGACAGCTGGGG+CGG | + | chr6_2:63419874-63419893 | Msa0923320:intron | 60.0% | |
| AGGGGGAGCCTCACTAGGTT+GGG | - | chr6_2:63420011-63420030 | None:intergenic | 60.0% | |
| CTATGAGGGGGAGCCTCACT+AGG | - | chr6_2:63420016-63420035 | None:intergenic | 60.0% | |
| TACCAAGCCACCTACCCTGC+CGG | - | chr6_2:63420098-63420117 | None:intergenic | 60.0% | |
| TCTGCCCCGGTTGCCTTATG+AGG | + | chr6_2:63420125-63420144 | Msa0923320:intron | 60.0% | |
| CTGCCCCGGTTGCCTTATGA+GGG | + | chr6_2:63420126-63420145 | Msa0923320:intron | 60.0% | |
| TTCTCAATCGGAGCGTGGGC+TGG | + | chr6_2:63422721-63422740 | Msa0923320:CDS | 60.0% | |
| !! | TGGGCTGGTGCATCACATGG+TGG | + | chr6_2:63422736-63422755 | Msa0923320:CDS | 60.0% |
| GTCAACGTGACAGCTGGGGC+GGG | + | chr6_2:63419875-63419894 | Msa0923320:intron | 65.0% | |
| GAGGGGGAGCCTCACTAGGT+TGG | - | chr6_2:63420012-63420031 | None:intergenic | 65.0% | |
| TTGAGGAGGAGGACCCGGCA+GGG | + | chr6_2:63420081-63420100 | Msa0923320:intron | 65.0% | |
| ACCAAGCCACCTACCCTGCC+GGG | - | chr6_2:63420097-63420116 | None:intergenic | 65.0% | |
| !! | GCGTGGGCTGGTGCATCACA+TGG | + | chr6_2:63422733-63422752 | Msa0923320:CDS | 65.0% |
| CTTGAGGAGGAGGACCCGGC+AGG | + | chr6_2:63420080-63420099 | Msa0923320:intron | 70.0% | |
| ACCCGGCAGGGTAGGTGGCT+TGG | + | chr6_2:63420093-63420112 | Msa0923320:intron | 70.0% | |
| GGAGGAGGACCCGGCAGGGT+AGG | + | chr6_2:63420085-63420104 | Msa0923320:intron | 75.0% | |
| GGAGGACCCGGCAGGGTAGG+TGG | + | chr6_2:63420088-63420107 | Msa0923320:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_2 | gene | 63418020 | 63423720 | 63418020 | ID=Msa0923320;Name=Msa0923320 |
| chr6_2 | mRNA | 63418020 | 63423720 | 63418020 | ID=Msa0923320-mRNA-1;Parent=Msa0923320;Name=Msa0923320-mRNA-1;_AED=0.05;_eAED=0.05;_QI=95|1|1|1|1|1|6|301|708 |
| chr6_2 | exon | 63418020 | 63418559 | 63418020 | ID=Msa0923320-mRNA-1:exon:9883;Parent=Msa0923320-mRNA-1 |
| chr6_2 | exon | 63420722 | 63420876 | 63420722 | ID=Msa0923320-mRNA-1:exon:9884;Parent=Msa0923320-mRNA-1 |
| chr6_2 | exon | 63421398 | 63421495 | 63421398 | ID=Msa0923320-mRNA-1:exon:9885;Parent=Msa0923320-mRNA-1 |
| chr6_2 | exon | 63421596 | 63421730 | 63421596 | ID=Msa0923320-mRNA-1:exon:9886;Parent=Msa0923320-mRNA-1 |
| chr6_2 | exon | 63421918 | 63422107 | 63421918 | ID=Msa0923320-mRNA-1:exon:9887;Parent=Msa0923320-mRNA-1 |
| chr6_2 | exon | 63422316 | 63423720 | 63422316 | ID=Msa0923320-mRNA-1:exon:9888;Parent=Msa0923320-mRNA-1 |
| chr6_2 | five_prime_UTR | 63418020 | 63418114 | 63418020 | ID=Msa0923320-mRNA-1:five_prime_utr;Parent=Msa0923320-mRNA-1 |
| chr6_2 | CDS | 63418115 | 63418559 | 63418115 | ID=Msa0923320-mRNA-1:cds;Parent=Msa0923320-mRNA-1 |
| chr6_2 | CDS | 63420722 | 63420876 | 63420722 | ID=Msa0923320-mRNA-1:cds;Parent=Msa0923320-mRNA-1 |
| chr6_2 | CDS | 63421398 | 63421495 | 63421398 | ID=Msa0923320-mRNA-1:cds;Parent=Msa0923320-mRNA-1 |
| chr6_2 | CDS | 63421596 | 63421730 | 63421596 | ID=Msa0923320-mRNA-1:cds;Parent=Msa0923320-mRNA-1 |
| chr6_2 | CDS | 63421918 | 63422107 | 63421918 | ID=Msa0923320-mRNA-1:cds;Parent=Msa0923320-mRNA-1 |
| chr6_2 | CDS | 63422316 | 63423419 | 63422316 | ID=Msa0923320-mRNA-1:cds;Parent=Msa0923320-mRNA-1 |
| chr6_2 | three_prime_UTR | 63423420 | 63423720 | 63423420 | ID=Msa0923320-mRNA-1:three_prime_utr;Parent=Msa0923320-mRNA-1 |
| Gene Sequence |
| Protein sequence |
