Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0923350 | XP_024641831.1 | 97.208 | 573 | 15 | 1 | 1 | 573 | 1 | 572 | 0.0 | 1177 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0923350 | sp|Q9LIR6|BAM1_ARATH | 72.297 | 592 | 128 | 10 | 1 | 573 | 1 | 575 | 0.0 | 858 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0677570 | Msa0923350 | 0.817023 | 4.088798e-52 | -8.615850e-47 |
| Msa0896370 | Msa0923350 | 0.951167 | 3.610739e-109 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0923350 | MtrunA17_Chr6g0481031 | 97.208 | 573 | 15 | 1 | 1 | 573 | 1 | 572 | 0.0 | 1177 |
| Msa0923350 | MtrunA17_Chr5g0399991 | 64.516 | 434 | 142 | 2 | 107 | 540 | 89 | 510 | 0.0 | 619 |
| Msa0923350 | MtrunA17_Chr5g0400001 | 64.055 | 434 | 144 | 2 | 107 | 540 | 87 | 508 | 0.0 | 615 |
| Msa0923350 | MtrunA17_Chr4g0055281 | 60.981 | 469 | 174 | 4 | 107 | 572 | 78 | 540 | 0.0 | 602 |
| Msa0923350 | MtrunA17_Chr4g0023601 | 52.184 | 435 | 199 | 6 | 107 | 537 | 13 | 442 | 5.47e-160 | 466 |
| Msa0923350 | MtrunA17_Chr2g0323051 | 47.619 | 462 | 226 | 8 | 107 | 564 | 86 | 535 | 2.02e-152 | 450 |
| Msa0923350 | MtrunA17_Chr8g0388651 | 48.984 | 443 | 220 | 4 | 101 | 540 | 73 | 512 | 7.79e-151 | 444 |
| Msa0923350 | MtrunA17_Chr7g0247631 | 45.642 | 436 | 224 | 8 | 107 | 537 | 265 | 692 | 1.21e-123 | 380 |
| Msa0923350 | MtrunA17_Chr2g0286431 | 39.509 | 448 | 256 | 6 | 96 | 541 | 71 | 505 | 1.60e-110 | 340 |
| Msa0923350 | MtrunA17_Chr5g0408851 | 38.293 | 410 | 244 | 7 | 107 | 514 | 218 | 620 | 3.03e-98 | 312 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0923350 | AT3G23920.1 | 72.297 | 592 | 128 | 10 | 1 | 573 | 1 | 575 | 0.0 | 858 |
| Msa0923350 | AT4G17090.1 | 60.256 | 468 | 180 | 3 | 102 | 569 | 81 | 542 | 0.0 | 611 |
| Msa0923350 | AT4G15210.1 | 49.083 | 436 | 212 | 7 | 107 | 537 | 14 | 444 | 6.30e-148 | 436 |
| Msa0923350 | AT4G00490.1 | 48.853 | 436 | 210 | 8 | 107 | 537 | 95 | 522 | 1.10e-141 | 421 |
| Msa0923350 | AT2G32290.1 | 45.534 | 459 | 239 | 5 | 107 | 564 | 78 | 526 | 1.39e-141 | 422 |
| Msa0923350 | AT4G15210.2 | 51.157 | 389 | 184 | 5 | 107 | 493 | 14 | 398 | 3.06e-140 | 413 |
| Msa0923350 | AT4G15210.3 | 49.747 | 396 | 190 | 6 | 146 | 537 | 1 | 391 | 4.39e-138 | 408 |
| Msa0923350 | AT4G15210.4 | 49.747 | 396 | 190 | 6 | 146 | 537 | 1 | 391 | 4.39e-138 | 408 |
| Msa0923350 | AT5G55700.1 | 42.404 | 441 | 239 | 4 | 107 | 537 | 92 | 527 | 3.37e-127 | 384 |
| Msa0923350 | AT2G45880.1 | 37.794 | 553 | 309 | 10 | 13 | 537 | 130 | 675 | 6.85e-121 | 372 |
| Msa0923350 | AT5G55700.2 | 44.073 | 329 | 173 | 3 | 215 | 537 | 41 | 364 | 2.23e-98 | 304 |
| Msa0923350 | AT5G45300.2 | 40.678 | 413 | 230 | 8 | 107 | 514 | 253 | 655 | 2.28e-98 | 314 |
| Msa0923350 | AT5G45300.1 | 40.678 | 413 | 230 | 8 | 107 | 514 | 255 | 657 | 2.47e-98 | 314 |
| Msa0923350 | AT5G45300.3 | 40.678 | 413 | 230 | 8 | 107 | 514 | 269 | 671 | 3.38e-98 | 314 |
| Msa0923350 | AT5G18670.1 | 35.146 | 478 | 286 | 9 | 82 | 555 | 63 | 520 | 2.86e-91 | 291 |
Find 196 sgRNAs with CRISPR-Local
Find 418 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTAATTCTTTCAAGTTTA+TGG | 0.082039 | 6_2:-63497229 | Msa0923350:exon |
| CTGATTTCATGCGTGCTTTC+AGG | 0.088797 | 6_2:-63492966 | Msa0923350:CDS |
| CACTTGCTCCCAACATTTAT+TGG | 0.108972 | 6_2:+63491520 | None:intergenic |
| CTAGATGAACCTGTGCTTTC+TGG | 0.113345 | 6_2:+63491744 | None:intergenic |
| ACAGTATTCCTTTGCCTAAA+TGG | 0.156296 | 6_2:-63493122 | Msa0923350:intron |
| AGAAGCCAGGTGAGTATAAT+TGG | 0.220356 | 6_2:-63496741 | Msa0923350:CDS |
| TATAATTAAATACACTTATA+TGG | 0.222833 | 6_2:-63491253 | Msa0923350:three_prime_UTR |
| AAAATTGTATTATAACTTAT+AGG | 0.226240 | 6_2:-63491427 | Msa0923350:three_prime_UTR |
| TGTTGTATTCTACTTCATTT+TGG | 0.226600 | 6_2:-63491309 | Msa0923350:three_prime_UTR |
| ATAAGTGTATTTAATTATAA+AGG | 0.233533 | 6_2:+63491257 | None:intergenic |
| ATTTGTTTCAACCTGATAAT+TGG | 0.236175 | 6_2:-63491589 | Msa0923350:CDS |
| GACAATTTCAAACACCTTCT+TGG | 0.251487 | 6_2:-63492943 | Msa0923350:CDS |
| ACAAACTTTCTCCAATTATC+AGG | 0.268602 | 6_2:+63491578 | None:intergenic |
| CAATCTTTAGGCACAAAATT+AGG | 0.272506 | 6_2:+63491354 | None:intergenic |
| GTATAATTGGGGTGGGTATA+TGG | 0.301068 | 6_2:-63496728 | Msa0923350:CDS |
| AAATTGTATTATAACTTATA+GGG | 0.305858 | 6_2:-63491426 | Msa0923350:three_prime_UTR |
| CCATACTGCTGCTGCGTTCA+TGG | 0.319923 | 6_2:+63497125 | None:intergenic |
| AAGGAAAGGGAGAGAGGTTA+AGG | 0.330281 | 6_2:+63497375 | None:intergenic |
| TGCACATGAACAGATATTAA+AGG | 0.334381 | 6_2:-63491687 | Msa0923350:CDS |
| ACATGGAAATTTCCAGGAAT+TGG | 0.341223 | 6_2:-63492394 | Msa0923350:CDS |
| TATTATAACTTATAGGGATT+AGG | 0.351094 | 6_2:-63491420 | Msa0923350:three_prime_UTR |
| GGATGTGTGGTGGGGATTGG+TGG | 0.355464 | 6_2:-63496770 | Msa0923350:CDS |
| GAAGGTAGCCATCGCGGTTA+CGG | 0.358269 | 6_2:+63491897 | None:intergenic |
| CCATCATACCCAGAGCAAAA+TGG | 0.368048 | 6_2:-63492418 | Msa0923350:CDS |
| CCCAGCCTCCACCTTCTTTG+CGG | 0.369282 | 6_2:+63492113 | None:intergenic |
| TACTAATTTATACAATCTTT+AGG | 0.370035 | 6_2:+63491342 | None:intergenic |
| GATGGATGTGTGGTGGGGAT+TGG | 0.370189 | 6_2:-63496773 | Msa0923350:CDS |
| TATCAGGTTGAAACAAATCT+TGG | 0.371891 | 6_2:+63491594 | None:intergenic |
| CATTGGAAAGCACCAATTCC+TGG | 0.375697 | 6_2:+63492382 | None:intergenic |
| GGGTGGGTATATGGAGCTTA+TGG | 0.377375 | 6_2:-63496719 | Msa0923350:CDS |
| TAATACCCTGCTGTTAGTTC+CGG | 0.378768 | 6_2:+63491926 | None:intergenic |
| TAAGTGTATTTAATTATAAA+GGG | 0.379172 | 6_2:+63491258 | None:intergenic |
| GCCGGTATTCATTGGCACTA+TGG | 0.382512 | 6_2:-63491965 | Msa0923350:CDS |
| AATGGAACATGGAAATTTCC+AGG | 0.389794 | 6_2:-63492400 | Msa0923350:CDS |
| TGTCAGATCTGGTCTGATTC+CGG | 0.395304 | 6_2:+63496996 | None:intergenic |
| CAGTATTCCTTTGCCTAAAT+GGG | 0.396936 | 6_2:-63493121 | Msa0923350:CDS |
| AAAGAATGAACGTTGAGATA+TGG | 0.400495 | 6_2:+63497519 | None:intergenic |
| GCGTTGAACATGACTCAAAT+AGG | 0.402151 | 6_2:-63497207 | Msa0923350:CDS |
| TGATTTCATGCGTGCTTTCA+GGG | 0.402789 | 6_2:-63492965 | Msa0923350:CDS |
| AAGGTAGCCATCGCGGTTAC+GGG | 0.403952 | 6_2:+63491898 | None:intergenic |
| GAAGCCAGGTGAGTATAATT+GGG | 0.415706 | 6_2:-63496740 | Msa0923350:CDS |
| TCCGCAAAGAAGGTGGAGGC+TGG | 0.418382 | 6_2:-63492114 | Msa0923350:CDS |
| GAAACATGGGCTTAAAGTTC+AGG | 0.423360 | 6_2:-63496686 | Msa0923350:CDS |
| ATCTCTTCTACAGCCCATTT+AGG | 0.424994 | 6_2:+63493108 | None:intergenic |
| GGTGATGATGGATGTGTGGT+GGG | 0.430756 | 6_2:-63496779 | Msa0923350:CDS |
| TGCTTTCCAATGCTATGATA+AGG | 0.433740 | 6_2:-63492371 | Msa0923350:intron |
| AAATCAGAATAACATTGAAC+TGG | 0.433909 | 6_2:+63492982 | None:intergenic |
| TGAAAGTTGCCGGTATTCAT+TGG | 0.435013 | 6_2:-63491973 | Msa0923350:CDS |
| CTCGCCAACATTTGAGCGAT+TGG | 0.436580 | 6_2:+63491875 | None:intergenic |
| TGCTGCAAATAAGTCAGAAT+GGG | 0.436619 | 6_2:-63492197 | Msa0923350:CDS |
| CCATGAACGCAGCAGCAGTA+TGG | 0.438556 | 6_2:-63497125 | Msa0923350:CDS |
| AAGATATCCGTGAAAGTTGC+CGG | 0.439379 | 6_2:-63491983 | Msa0923350:CDS |
| TAGATGAACCTGTGCTTTCT+GGG | 0.440379 | 6_2:+63491745 | None:intergenic |
| ATCTTGCATATACTGATCAA+TGG | 0.440751 | 6_2:-63493071 | Msa0923350:CDS |
| TTTGTGAAGAAGATGAAAGA+AGG | 0.444526 | 6_2:-63491551 | Msa0923350:CDS |
| ATGAATACCGGCAACTTTCA+CGG | 0.451034 | 6_2:+63491976 | None:intergenic |
| ACTTGATTCACGAGCTTCTC+CGG | 0.454036 | 6_2:+63491779 | None:intergenic |
| CTGAAGAGTGCTGGTGTGGA+AGG | 0.456631 | 6_2:-63496802 | Msa0923350:CDS |
| GGAGGCTGGGACAGCGAATA+CGG | 0.462609 | 6_2:-63492100 | Msa0923350:CDS |
| CGATCAGATGTTATAGAAAA+CGG | 0.463704 | 6_2:-63497066 | Msa0923350:CDS |
| TCGGTTGATGTTGATTCAAT+CGG | 0.464310 | 6_2:+63497162 | None:intergenic |
| TCACAAGCCGATGTCAGATC+TGG | 0.465088 | 6_2:+63496985 | None:intergenic |
| TGTGGTGGGGATTGGTGGAG+AGG | 0.469171 | 6_2:-63496765 | Msa0923350:CDS |
| CCATGTAGATCACCGGTACT+AGG | 0.470928 | 6_2:-63497024 | Msa0923350:CDS |
| CAGCTGGTCCCATTCCAACT+TGG | 0.473994 | 6_2:+63492455 | None:intergenic |
| TCTTGCATATACTGATCAAT+GGG | 0.474079 | 6_2:-63493070 | Msa0923350:CDS |
| TGGTGTGGAAGGGGTGATGA+TGG | 0.474478 | 6_2:-63496791 | Msa0923350:CDS |
| GTATATGGAGCTTATGGAAA+TGG | 0.474821 | 6_2:-63496713 | Msa0923350:CDS |
| TGACAACGTAGATTCGTTGC+TGG | 0.475188 | 6_2:+63497096 | None:intergenic |
| GAAAGAGAAGAGTGGAGTCC+CGG | 0.475379 | 6_2:-63496908 | Msa0923350:CDS |
| AAGCACAGGTTCATCTAGCC+GGG | 0.475765 | 6_2:-63491739 | Msa0923350:CDS |
| CGATGGGGAATGGTGTGAAT+AGG | 0.476334 | 6_2:-63496855 | Msa0923350:CDS |
| TCAGGAAATCCAAGTTGGAA+TGG | 0.481275 | 6_2:-63492464 | Msa0923350:intron |
| CATGGAAGCAGTTGTTGGCT+CGG | 0.484663 | 6_2:+63497143 | None:intergenic |
| GAAAAGTGCCAATAAATGTT+GGG | 0.487450 | 6_2:-63491528 | Msa0923350:CDS |
| CAGGAAATCCAAGTTGGAAT+GGG | 0.489983 | 6_2:-63492463 | Msa0923350:CDS |
| GCGTGATCACGAGCAGCCTC+AGG | 0.490422 | 6_2:-63491816 | Msa0923350:CDS |
| ATGCTGCAAATAAGTCAGAA+TGG | 0.494454 | 6_2:-63492198 | Msa0923350:CDS |
| TGATCAGTATATGCAAGATC+AGG | 0.500092 | 6_2:+63493075 | None:intergenic |
| TATATACCTTATCATAGCAT+TGG | 0.501002 | 6_2:+63492365 | None:intergenic |
| ACAAATCTTGGTTCATCCTA+AGG | 0.501427 | 6_2:+63491606 | None:intergenic |
| ATGGAAATGGCGAAGAAACA+TGG | 0.502805 | 6_2:-63496700 | Msa0923350:CDS |
| TGGTACAAGGTCTCATGCTC+CGG | 0.503262 | 6_2:-63491945 | Msa0923350:CDS |
| ATGCAGGTGAGTACAACAAC+TGG | 0.506508 | 6_2:-63492156 | Msa0923350:CDS |
| ATGTTGGGAGCAAGTGGAGA+GGG | 0.507668 | 6_2:-63491513 | Msa0923350:CDS |
| GGCGGTGAATGCGGCGATGG+CGG | 0.510061 | 6_2:-63496827 | Msa0923350:CDS |
| TGTGTGCATTCACATACCTT+AGG | 0.510560 | 6_2:-63491622 | Msa0923350:CDS |
| GGAAAAGTGCCAATAAATGT+TGG | 0.513383 | 6_2:-63491529 | Msa0923350:CDS |
| TAGGCACAAAATTAGGCTGA+TGG | 0.514983 | 6_2:+63491361 | None:intergenic |
| AATGATGGACGGTAGAGTAC+AGG | 0.518603 | 6_2:+63497470 | None:intergenic |
| CCGCAAAGAAGGTGGAGGCT+GGG | 0.520804 | 6_2:-63492113 | Msa0923350:CDS |
| TTGTGAAGAAGATGAAAGAA+GGG | 0.520951 | 6_2:-63491550 | Msa0923350:CDS |
| CCTAGTACCGGTGATCTACA+TGG | 0.521570 | 6_2:+63497024 | None:intergenic |
| AAAGCACAGGTTCATCTAGC+CGG | 0.521686 | 6_2:-63491740 | Msa0923350:CDS |
| CAAGTTGGAATGGGACCAGC+TGG | 0.527927 | 6_2:-63492454 | Msa0923350:CDS |
| GTGGTGGGGATTGGTGGAGA+GGG | 0.528829 | 6_2:-63496764 | Msa0923350:CDS |
| ACCATAGTGCCAATGAATAC+CGG | 0.530958 | 6_2:+63491964 | None:intergenic |
| GTGGAGAATGAGTTTGTAGC+TGG | 0.535437 | 6_2:-63496943 | Msa0923350:CDS |
| CATGCTCCGGAACTAACAGC+AGG | 0.536163 | 6_2:-63491932 | Msa0923350:CDS |
| GCAACAGCCTCTTGCACAAG+AGG | 0.536388 | 6_2:+63491461 | None:intergenic |
| ACAATTCAGGAAATCCAAGT+TGG | 0.536611 | 6_2:-63492469 | Msa0923350:intron |
| GCGTTCATGGAAGCAGTTGT+TGG | 0.536783 | 6_2:+63497138 | None:intergenic |
| TGATCTTGTTGCCATACATA+AGG | 0.536881 | 6_2:-63491181 | Msa0923350:three_prime_UTR |
| CCTTCCAATCGCTCAAATGT+TGG | 0.536922 | 6_2:-63491879 | Msa0923350:CDS |
| TGATACTTTACCTGTACTCA+AGG | 0.537913 | 6_2:-63493013 | Msa0923350:CDS |
| GATGTTGATTCAATCGGTAT+CGG | 0.537995 | 6_2:+63497168 | None:intergenic |
| CCACCCCAATTATACTCACC+TGG | 0.538551 | 6_2:+63496736 | None:intergenic |
| AAGTCAGAATGGGGAAGCAC+GGG | 0.538635 | 6_2:-63492187 | Msa0923350:CDS |
| GAAGGCGGTGAATGCGGCGA+TGG | 0.541273 | 6_2:-63496830 | Msa0923350:CDS |
| AGTGTTGCGTGGAGGAATGA+TGG | 0.542391 | 6_2:+63497455 | None:intergenic |
| GGGTGATGATGGATGTGTGG+TGG | 0.542401 | 6_2:-63496780 | Msa0923350:CDS |
| TTGGTGGAGAGGGAGAAGCC+AGG | 0.545012 | 6_2:-63496754 | Msa0923350:CDS |
| GGACTTCTGCCCTTGAGTAC+AGG | 0.546808 | 6_2:+63493003 | None:intergenic |
| TAAGTCAGAATGGGGAAGCA+CGG | 0.547960 | 6_2:-63492188 | Msa0923350:CDS |
| AGCACGGGACCTACTGATGC+AGG | 0.550981 | 6_2:-63492172 | Msa0923350:CDS |
| TCTACAGCCCATTTAGGCAA+AGG | 0.553791 | 6_2:+63493114 | None:intergenic |
| ATGGCGGCACTGAAGAGTGC+TGG | 0.555015 | 6_2:-63496811 | Msa0923350:CDS |
| TACACAGCCTCTTGTGCAAG+AGG | 0.555997 | 6_2:-63491468 | Msa0923350:CDS |
| TAAATGGGCTGTAGAAGAGA+TGG | 0.559568 | 6_2:-63493106 | Msa0923350:CDS |
| CCGTTAGATAGTGTGACGAT+GGG | 0.559999 | 6_2:-63496871 | Msa0923350:CDS |
| GTGATGATGGATGTGTGGTG+GGG | 0.562496 | 6_2:-63496778 | Msa0923350:CDS |
| AAGGGGTGATGATGGATGTG+TGG | 0.565032 | 6_2:-63496783 | Msa0923350:CDS |
| AACGGCATCATCACATACAC+CGG | 0.568607 | 6_2:+63496889 | None:intergenic |
| CCAACATTTGAGCGATTGGA+AGG | 0.570940 | 6_2:+63491879 | None:intergenic |
| TACAACACCCGTAACCGCGA+TGG | 0.571460 | 6_2:-63491905 | Msa0923350:CDS |
| AAGACGAAGAAAGAGAAGAG+TGG | 0.571594 | 6_2:-63496916 | Msa0923350:CDS |
| GATAGTGTGACGATGGGGAA+TGG | 0.572327 | 6_2:-63496865 | Msa0923350:CDS |
| GAGTACAGGAACGGTGGAGA+TGG | 0.574381 | 6_2:+63497484 | None:intergenic |
| TCTTGTTGCCATACATAAGG+TGG | 0.575393 | 6_2:-63491178 | Msa0923350:three_prime_UTR |
| AAATCAATCTTTGACAACAC+TGG | 0.582272 | 6_2:-63492010 | Msa0923350:CDS |
| CCAGGTGAGTATAATTGGGG+TGG | 0.582308 | 6_2:-63496736 | Msa0923350:CDS |
| TTGTACTCACCTGCATCAGT+AGG | 0.583919 | 6_2:+63492163 | None:intergenic |
| GGGTAACGTAACTCACCAGC+TGG | 0.584564 | 6_2:+63492439 | None:intergenic |
| GAATGGTGTGAATAGGAAGA+AGG | 0.585955 | 6_2:-63496848 | Msa0923350:CDS |
| CAATAAATGTTGGGAGCAAG+TGG | 0.588636 | 6_2:-63491519 | Msa0923350:CDS |
| AACGGTGGAGATGGTGTGAA+TGG | 0.588779 | 6_2:+63497493 | None:intergenic |
| GCTCAAATGTTGGCGAGACA+CGG | 0.591977 | 6_2:-63491869 | Msa0923350:CDS |
| TTCATTGGCACTATGGTACA+AGG | 0.591996 | 6_2:-63491958 | Msa0923350:CDS |
| TAGGAAGAAGGCGGTGAATG+CGG | 0.592720 | 6_2:-63496836 | Msa0923350:CDS |
| GAAGAGTGCTGGTGTGGAAG+GGG | 0.592794 | 6_2:-63496800 | Msa0923350:CDS |
| TTTAGCTACCCAGAAAGCAC+AGG | 0.593582 | 6_2:-63491753 | Msa0923350:CDS |
| GTTGAATGTCGAGGGTAACT+CGG | 0.597129 | 6_2:-63491657 | Msa0923350:CDS |
| TGAAGAGTGCTGGTGTGGAA+GGG | 0.599403 | 6_2:-63496801 | Msa0923350:CDS |
| GGAGAAAATATTTACCACAA+TGG | 0.603015 | 6_2:+63492915 | None:intergenic |
| TCAGGATGCACAATGTGCAC+CGG | 0.605743 | 6_2:-63491798 | Msa0923350:CDS |
| CCACAATGGTGTCACCAAGA+AGG | 0.607264 | 6_2:+63492929 | None:intergenic |
| GGCGTCCGCGTTGAATGTCG+AGG | 0.608236 | 6_2:-63491666 | Msa0923350:CDS |
| AGCATTAACGAAGGATGTGG+TGG | 0.611028 | 6_2:-63496962 | Msa0923350:CDS |
| CCTTCTTGGTGACACCATTG+TGG | 0.615352 | 6_2:-63492929 | Msa0923350:intron |
| TGGAAATGGCGAAGAAACAT+GGG | 0.616259 | 6_2:-63496699 | Msa0923350:CDS |
| ATGTGAGAATCCTCTCACCA+TGG | 0.618747 | 6_2:+63492038 | None:intergenic |
| ATTCCGGTACCGCCTAGTAC+CGG | 0.620672 | 6_2:+63497012 | None:intergenic |
| CAGGTGAGTATAATTGGGGT+GGG | 0.620812 | 6_2:-63496735 | Msa0923350:CDS |
| ATTAGGAAACAGTCACAAGT+AGG | 0.621489 | 6_2:-63491403 | Msa0923350:three_prime_UTR |
| GGCACTGAAGAGTGCTGGTG+TGG | 0.623655 | 6_2:-63496806 | Msa0923350:CDS |
| CCCATCGTCACACTATCTAA+CGG | 0.626379 | 6_2:+63496871 | None:intergenic |
| CATCAATGTGGTGGTAACGT+TGG | 0.629470 | 6_2:-63496649 | Msa0923350:CDS |
| ACCCAGAGCAAAATGGAACA+TGG | 0.629658 | 6_2:-63492411 | Msa0923350:CDS |
| TGAAGCATTAACGAAGGATG+TGG | 0.632432 | 6_2:-63496965 | Msa0923350:CDS |
| TACACGTGTCACATAACCAA+TGG | 0.632869 | 6_2:-63497430 | Msa0923350:five_prime_UTR |
| GCCGTTAGATAGTGTGACGA+TGG | 0.634294 | 6_2:-63496872 | Msa0923350:CDS |
| GGTGATCTACATGGACTCAT+CGG | 0.635099 | 6_2:+63497033 | None:intergenic |
| TGGTGTGAATAGGAAGAAGG+CGG | 0.638590 | 6_2:-63496845 | Msa0923350:CDS |
| CCGGGGAAAATGCTTTGCCA+CGG | 0.638800 | 6_2:-63491721 | Msa0923350:CDS |
| AATGTTGGGAGCAAGTGGAG+AGG | 0.645936 | 6_2:-63491514 | Msa0923350:CDS |
| GGTGCACATTGTGCATCCTG+AGG | 0.646679 | 6_2:+63491800 | None:intergenic |
| TGCTGTTGAACCATGGTGAG+AGG | 0.654830 | 6_2:-63492048 | Msa0923350:CDS |
| AAGCCAGGTGAGTATAATTG+GGG | 0.655599 | 6_2:-63496739 | Msa0923350:CDS |
| CGTTAGATAGTGTGACGATG+GGG | 0.657639 | 6_2:-63496870 | Msa0923350:CDS |
| GATGAGTCCATGTAGATCAC+CGG | 0.658163 | 6_2:-63497031 | Msa0923350:CDS |
| ACATGGGCTTAAAGTTCAGG+CGG | 0.658601 | 6_2:-63496683 | Msa0923350:CDS |
| GAGAATGAGTTTGTAGCTGG+AGG | 0.658872 | 6_2:-63496940 | Msa0923350:CDS |
| GGAGAAGCTCGTGAATCAAG+TGG | 0.659808 | 6_2:-63491777 | Msa0923350:CDS |
| TCTCAAATGCTGTTGAACCA+TGG | 0.663371 | 6_2:-63492055 | Msa0923350:CDS |
| ACGGCATCATCACATACACC+GGG | 0.665787 | 6_2:+63496890 | None:intergenic |
| GCGTCCGCGTTGAATGTCGA+GGG | 0.669013 | 6_2:-63491665 | Msa0923350:CDS |
| AGGAAACAGTCACAAGTAGG+TGG | 0.669727 | 6_2:-63491400 | Msa0923350:three_prime_UTR |
| AGCACAGGTTCATCTAGCCG+GGG | 0.672042 | 6_2:-63491738 | Msa0923350:CDS |
| ATGCTCCGGAACTAACAGCA+GGG | 0.677291 | 6_2:-63491931 | Msa0923350:CDS |
| GCTGCAAATAAGTCAGAATG+GGG | 0.678531 | 6_2:-63492196 | Msa0923350:CDS |
| CGATTGGAAGGTAGCCATCG+CGG | 0.680061 | 6_2:+63491891 | None:intergenic |
| CGTGTAAGAGTGTTGCGTGG+AGG | 0.680457 | 6_2:+63497447 | None:intergenic |
| GATACTTTACCTGTACTCAA+GGG | 0.684584 | 6_2:-63493012 | Msa0923350:CDS |
| GGCTTGTGAAGCATTAACGA+AGG | 0.686060 | 6_2:-63496971 | Msa0923350:CDS |
| AATCAGACCAGATCTGACAT+CGG | 0.690093 | 6_2:-63496992 | Msa0923350:CDS |
| GCATTTGAGAGTACCATGTG+AGG | 0.694448 | 6_2:+63492068 | None:intergenic |
| ACTCAAATAGGTAGTCTCGT+CGG | 0.694692 | 6_2:-63497195 | Msa0923350:CDS |
| ACGGTAGAGTACAGGAACGG+TGG | 0.717492 | 6_2:+63497478 | None:intergenic |
| TTGCGTGGAGGAATGATGGA+CGG | 0.717810 | 6_2:+63497459 | None:intergenic |
| GATCTACATGGACTCATCGG+CGG | 0.721477 | 6_2:+63497036 | None:intergenic |
| CTTGCATATACTGATCAATG+GGG | 0.723447 | 6_2:-63493069 | Msa0923350:CDS |
| TGTGCATGTTCATCATACCG+TGG | 0.724780 | 6_2:+63491704 | None:intergenic |
| TGGACGGTAGAGTACAGGAA+CGG | 0.735763 | 6_2:+63497475 | None:intergenic |
| ACACGTGTAAGAGTGTTGCG+TGG | 0.746763 | 6_2:+63497444 | None:intergenic |
| TGTAGATCACCGGTACTAGG+CGG | 0.762276 | 6_2:-63497021 | Msa0923350:CDS |
| GTTACCCTCGACATTCAACG+CGG | 0.791435 | 6_2:+63491661 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTATTATTTTTAATTTTA+AGG | - | chr6_2:63493020-63493039 | Msa0923350:CDS | 0.0% |
| !!! | ATTATTAGTTTAATTGATAA+TGG | - | chr6_2:63492169-63492188 | Msa0923350:CDS | 10.0% |
| !!! | TATAAAATATTTCTTCTTTT+AGG | + | chr6_2:63492279-63492298 | None:intergenic | 10.0% |
| !!! | TTTATTTTGATAAACAAAAT+GGG | + | chr6_2:63493255-63493274 | None:intergenic | 10.0% |
| !!! | TTTTATTTTGATAAACAAAA+TGG | + | chr6_2:63493256-63493275 | None:intergenic | 10.0% |
| !!! | AAAAACAAAAAAAGTATTTT+GGG | + | chr6_2:63493359-63493378 | None:intergenic | 10.0% |
| !!! | AAAAAACAAAAAAAGTATTT+TGG | + | chr6_2:63493360-63493379 | None:intergenic | 10.0% |
| !!! | TTTTGTTTTTTTAATTTTGA+AGG | - | chr6_2:63493369-63493388 | Msa0923350:intron | 10.0% |
| !!! | TGTACAAAAATTTAAATTTT+GGG | + | chr6_2:63493566-63493585 | None:intergenic | 10.0% |
| !!! | ATGTACAAAAATTTAAATTT+TGG | + | chr6_2:63493567-63493586 | None:intergenic | 10.0% |
| !!! | AATTAAGTTTTTTTTTTTGA+AGG | + | chr6_2:63493692-63493711 | None:intergenic | 10.0% |
| !!! | ATAATTTGTAAATAAAGAAT+AGG | + | chr6_2:63494255-63494274 | None:intergenic | 10.0% |
| !!! | TATTCTTTATTTACAAATTA+TGG | - | chr6_2:63494254-63494273 | Msa0923350:intron | 10.0% |
| !!! | TACAAAAATTTTTTTTTTGT+TGG | + | chr6_2:63494414-63494433 | None:intergenic | 10.0% |
| !! | AAAATTGTATTATAACTTAT+AGG | - | chr6_2:63497240-63497259 | Msa0923350:five_prime_UTR | 10.0% |
| !! | AAATTGTATTATAACTTATA+GGG | - | chr6_2:63497241-63497260 | Msa0923350:five_prime_UTR | 10.0% |
| !! | TAAGTGTATTTAATTATAAA+GGG | + | chr6_2:63497412-63497431 | None:intergenic | 10.0% |
| !! | ATAAGTGTATTTAATTATAA+AGG | + | chr6_2:63497413-63497432 | None:intergenic | 10.0% |
| !! | TATAATTAAATACACTTATA+TGG | - | chr6_2:63497414-63497433 | Msa0923350:five_prime_UTR | 10.0% |
| !!! | GATTATTTTAATTCTAAAAG+AGG | + | chr6_2:63492076-63492095 | None:intergenic | 15.0% |
| !!! | TTTGTATAAAATTTGTTTGT+AGG | - | chr6_2:63492974-63492993 | Msa0923350:CDS | 15.0% |
| !!! | AAATATTTTCAATGTTACTA+TGG | + | chr6_2:63493099-63493118 | None:intergenic | 15.0% |
| !!! | AATCAAACAAATTTGATTTA+AGG | - | chr6_2:63493178-63493197 | Msa0923350:intron | 15.0% |
| !!! | GTACAAAAATTTAAATTTTG+GGG | + | chr6_2:63493565-63493584 | None:intergenic | 15.0% |
| !!! | AATTTGAGTTTTAGTATTTT+TGG | - | chr6_2:63493723-63493742 | Msa0923350:intron | 15.0% |
| !!! | TTTTTGTATTCAATTTTGAA+TGG | + | chr6_2:63493839-63493858 | None:intergenic | 15.0% |
| !!! | AAAAATTTTTTTTTTGTTGG+TGG | + | chr6_2:63494411-63494430 | None:intergenic | 15.0% |
| !! | CAAATTGATATTGATATATT+GGG | + | chr6_2:63495231-63495250 | None:intergenic | 15.0% |
| !! | ACAAATTGATATTGATATAT+TGG | + | chr6_2:63495232-63495251 | None:intergenic | 15.0% |
| !!! | TTTAAACTCTTTTCATTTAT+GGG | - | chr6_2:63495499-63495518 | Msa0923350:intron | 15.0% |
| !!! | ACTTAATGTTTTTTATATCA+TGG | - | chr6_2:63496123-63496142 | Msa0923350:intron | 15.0% |
| !! | TACTAATTTATACAATCTTT+AGG | + | chr6_2:63497328-63497347 | None:intergenic | 15.0% |
| !!! | AATATTTTTGATTTGACCAT+TGG | + | chr6_2:63491256-63491275 | None:intergenic | 20.0% |
| !! | TAGAAATGAAAAGAAAAAGA+TGG | + | chr6_2:63491332-63491351 | None:intergenic | 20.0% |
| !!! | TTCTAATTCTTTCAAGTTTA+TGG | - | chr6_2:63491438-63491457 | Msa0923350:exon | 20.0% |
| !! | AATCTAAAGATATTAATAGC+AGG | - | chr6_2:63492470-63492489 | Msa0923350:intron | 20.0% |
| !!! | TTTGGACATGTATTTTAAAA+TGG | + | chr6_2:63492690-63492709 | None:intergenic | 20.0% |
| !! | TAAATTGTGATTATGATTTG+TGG | - | chr6_2:63493209-63493228 | Msa0923350:intron | 20.0% |
| !!! | ATAGTGTCTTATCTATTTTT+TGG | - | chr6_2:63493539-63493558 | Msa0923350:intron | 20.0% |
| !!! | ATCTCTAAAAAGATTAAAAC+CGG | - | chr6_2:63493585-63493604 | Msa0923350:intron | 20.0% |
| !! | TTAGTTGTGAATTCTTAATT+AGG | + | chr6_2:63493644-63493663 | None:intergenic | 20.0% |
| !! | AAAATTGATCGTATCATATT+TGG | + | chr6_2:63493793-63493812 | None:intergenic | 20.0% |
| !!! | ACACTAGTTTCTTTTATATT+TGG | - | chr6_2:63493899-63493918 | Msa0923350:intron | 20.0% |
| !!! | AAAAAATGTTTTAGACACAT+AGG | - | chr6_2:63493969-63493988 | Msa0923350:intron | 20.0% |
| !! | TGTAAATAAAGAATAGGTAT+TGG | + | chr6_2:63494249-63494268 | None:intergenic | 20.0% |
| !!! | AAAAATGTTTTTAATGTGTG+TGG | - | chr6_2:63494485-63494504 | Msa0923350:intron | 20.0% |
| !! | TATGTGTTAATGAGTTTAAA+TGG | - | chr6_2:63494924-63494943 | Msa0923350:intron | 20.0% |
| !! | TTCTTCAAAAGAAGAAAAAA+AGG | - | chr6_2:63495038-63495057 | Msa0923350:intron | 20.0% |
| !! | TCTTCTGTCTAAATTTATTT+AGG | - | chr6_2:63495419-63495438 | Msa0923350:intron | 20.0% |
| !! | CTTCTGTCTAAATTTATTTA+GGG | - | chr6_2:63495420-63495439 | Msa0923350:intron | 20.0% |
| !!! | TTTAGGGTTAAATATGTTTT+TGG | - | chr6_2:63495436-63495455 | Msa0923350:intron | 20.0% |
| !!! | GAAAAGTTGGTATATTTATA+GGG | + | chr6_2:63495463-63495482 | None:intergenic | 20.0% |
| !!! | GTTTAAACTCTTTTCATTTA+TGG | - | chr6_2:63495498-63495517 | Msa0923350:intron | 20.0% |
| !!! | AATTTTGAATATTTGTCACT+TGG | - | chr6_2:63495628-63495647 | Msa0923350:intron | 20.0% |
| !! | ATAGTAAAAACAACGTATAA+TGG | + | chr6_2:63495789-63495808 | None:intergenic | 20.0% |
| !!! | TTTTCTATTTCTAAATTTGC+AGG | + | chr6_2:63495819-63495838 | None:intergenic | 20.0% |
| !!! | ATTGATTCTAACTTAAAGTT+AGG | + | chr6_2:63496087-63496106 | None:intergenic | 20.0% |
| !! | TATTATAACTTATAGGGATT+AGG | - | chr6_2:63497247-63497266 | Msa0923350:intron | 20.0% |
| !!! | TTTTTCATAATATCATCTCT+AGG | - | chr6_2:63497449-63497468 | Msa0923350:five_prime_UTR | 20.0% |
| !! | GATGAGATTTTATAAGGAAA+GGG | + | chr6_2:63491308-63491327 | None:intergenic | 25.0% |
| !! | AGATGAGATTTTATAAGGAA+AGG | + | chr6_2:63491309-63491328 | None:intergenic | 25.0% |
| ! | ATAATGGCTAATATAAGATG+AGG | - | chr6_2:63492185-63492204 | Msa0923350:CDS | 25.0% |
| ! | TGAAATACAAAAAAGATGAG+AGG | - | chr6_2:63492359-63492378 | Msa0923350:intron | 25.0% |
| !!! | TCTACTTTTCAATTTGCAAT+CGG | + | chr6_2:63492504-63492523 | None:intergenic | 25.0% |
| !! | ACTTCTAGAAAAATGCTAAA+TGG | + | chr6_2:63492614-63492633 | None:intergenic | 25.0% |
| ! | TTATAGTCACAAAACGTATA+AGG | + | chr6_2:63492654-63492673 | None:intergenic | 25.0% |
| !!! | GACATGTATTTTAAAATGGA+GGG | + | chr6_2:63492686-63492705 | None:intergenic | 25.0% |
| ! | ATAGTGCACATTGTAAAAAT+TGG | - | chr6_2:63492893-63492912 | Msa0923350:intron | 25.0% |
| !!! | ATTGGACATGTATTTTGAAA+CGG | - | chr6_2:63492911-63492930 | Msa0923350:intron | 25.0% |
| !! | TCTCTAAAAAGATTAAAACC+GGG | - | chr6_2:63493586-63493605 | Msa0923350:intron | 25.0% |
| !! | TTCTTAATTAGGATTTTGCA+GGG | + | chr6_2:63493633-63493652 | None:intergenic | 25.0% |
| !! | ATTCTTAATTAGGATTTTGC+AGG | + | chr6_2:63493634-63493653 | None:intergenic | 25.0% |
| !! | CCAAATTGGTAGTATTAAAT+TGG | + | chr6_2:63493997-63494016 | None:intergenic | 25.0% |
| ! | CCAATTTAATACTACCAATT+TGG | - | chr6_2:63493994-63494013 | Msa0923350:intron | 25.0% |
| ! | AAATACAAACTAGTTGCATT+GGG | + | chr6_2:63494023-63494042 | None:intergenic | 25.0% |
| ! | AAAATACAAACTAGTTGCAT+TGG | + | chr6_2:63494024-63494043 | None:intergenic | 25.0% |
| ! | TCCTTTAATTGACAACTTAT+GGG | + | chr6_2:63494285-63494304 | None:intergenic | 25.0% |
| ! | ATCCTTTAATTGACAACTTA+TGG | + | chr6_2:63494286-63494305 | None:intergenic | 25.0% |
| ! | TATGGACAATGCATAATATA+TGG | - | chr6_2:63494362-63494381 | Msa0923350:intron | 25.0% |
| ! | CAGTTTCATAAAGTTACTAT+TGG | - | chr6_2:63494810-63494829 | Msa0923350:intron | 25.0% |
| !!! | ATGAGTCTTACTTTTATTTG+TGG | - | chr6_2:63495076-63495095 | Msa0923350:intron | 25.0% |
| !!! | CGAAAAGTTGGTATATTTAT+AGG | + | chr6_2:63495464-63495483 | None:intergenic | 25.0% |
| ! | AAATCAGAATAACATTGAAC+TGG | + | chr6_2:63495688-63495707 | None:intergenic | 25.0% |
| ! | CGTATAATGGTAAAATGAAT+TGG | + | chr6_2:63495776-63495795 | None:intergenic | 25.0% |
| ! | GAAAACAAAGTAAAACAAGA+TGG | - | chr6_2:63495834-63495853 | Msa0923350:intron | 25.0% |
| ! | TGAAATCTGTGAAATCAATT+TGG | - | chr6_2:63495882-63495901 | Msa0923350:intron | 25.0% |
| !! | ATTTGAAATGACGATGAATT+TGG | - | chr6_2:63495925-63495944 | Msa0923350:intron | 25.0% |
| ! | TGAGTTTAATGAAATCACAA+TGG | + | chr6_2:63496003-63496022 | None:intergenic | 25.0% |
| ! | TATATACCTTATCATAGCAT+TGG | + | chr6_2:63496305-63496324 | None:intergenic | 25.0% |
| ! | TACAAAAGAAAGAGTTCAAA+AGG | + | chr6_2:63496356-63496375 | None:intergenic | 25.0% |
| ! | ATTTGTTTCAACCTGATAAT+TGG | - | chr6_2:63497078-63497097 | Msa0923350:CDS | 25.0% |
| !! | TGTTGTATTCTACTTCATTT+TGG | - | chr6_2:63497358-63497377 | Msa0923350:five_prime_UTR | 25.0% |
| ! | ATAAAAATCCACCTTATGTA+TGG | + | chr6_2:63497500-63497519 | None:intergenic | 25.0% |
| !!! | AAGGTGGATTTTTATTGATA+AGG | - | chr6_2:63497505-63497524 | Msa0923350:five_prime_UTR | 25.0% |
| AAAGAATGAACGTTGAGATA+TGG | + | chr6_2:63491151-63491170 | None:intergenic | 30.0% | |
| ! | GATGGAGATGAGATTTTATA+AGG | + | chr6_2:63491314-63491333 | None:intergenic | 30.0% |
| !!! | TTAGTGTTGTTTTACTTTGC+TGG | + | chr6_2:63491365-63491384 | None:intergenic | 30.0% |
| CGATCAGATGTTATAGAAAA+CGG | - | chr6_2:63491601-63491620 | Msa0923350:CDS | 30.0% | |
| ! | GTTATGTCTTTTCATCAATG+TGG | - | chr6_2:63492006-63492025 | Msa0923350:CDS | 30.0% |
| ATATTTGCTTACTATGCTAG+TGG | - | chr6_2:63492129-63492148 | Msa0923350:CDS | 30.0% | |
| GTGTTAAAGGAAAAGAAAGT+AGG | - | chr6_2:63492422-63492441 | Msa0923350:CDS | 30.0% | |
| ! | AAGATGAAAGCATGTTTGAT+AGG | - | chr6_2:63492534-63492553 | Msa0923350:intron | 30.0% |
| ! | AGATGAAAGCATGTTTGATA+GGG | - | chr6_2:63492535-63492554 | Msa0923350:intron | 30.0% |
| !!! | GGACATGTATTTTAAAATGG+AGG | + | chr6_2:63492687-63492706 | None:intergenic | 30.0% |
| AAAAAAATCACTCATCACTC+TGG | + | chr6_2:63493505-63493524 | None:intergenic | 30.0% | |
| !! | GTAGAAAGAGAGTGTTATTA+AGG | - | chr6_2:63493866-63493885 | Msa0923350:intron | 30.0% |
| CCTTTAATTGACAACTTATG+GGG | + | chr6_2:63494284-63494303 | None:intergenic | 30.0% | |
| GACAATGCATAATATATGGA+AGG | - | chr6_2:63494366-63494385 | Msa0923350:intron | 30.0% | |
| TGCATAATATATGGAAGGTT+CGG | - | chr6_2:63494371-63494390 | Msa0923350:intron | 30.0% | |
| !!! | ATTTTTTTTTTGTTGGTGGC+CGG | + | chr6_2:63494407-63494426 | None:intergenic | 30.0% |
| TCTAATGTGATGTGAGTTTA+AGG | - | chr6_2:63494460-63494479 | Msa0923350:intron | 30.0% | |
| TTGCATATTGCTTCTTAACT+TGG | - | chr6_2:63494572-63494591 | Msa0923350:intron | 30.0% | |
| CTTCACTAAGAAAAAGTAGT+TGG | - | chr6_2:63494622-63494641 | Msa0923350:intron | 30.0% | |
| AAGAAAAAGTAGTTGGAACT+TGG | - | chr6_2:63494629-63494648 | Msa0923350:intron | 30.0% | |
| ATTAACACATACAAGTGAAG+GGG | + | chr6_2:63494915-63494934 | None:intergenic | 30.0% | |
| CATTAACACATACAAGTGAA+GGG | + | chr6_2:63494916-63494935 | None:intergenic | 30.0% | |
| TCATTAACACATACAAGTGA+AGG | + | chr6_2:63494917-63494936 | None:intergenic | 30.0% | |
| TGGTATGTAGTGAAAAAGTT+TGG | - | chr6_2:63495096-63495115 | Msa0923350:intron | 30.0% | |
| ACTATCTATGTTGAGATTAG+TGG | - | chr6_2:63495204-63495223 | Msa0923350:intron | 30.0% | |
| AAGAGACTAAAACGAAAAGT+TGG | + | chr6_2:63495476-63495495 | None:intergenic | 30.0% | |
| ATCTTGCATATACTGATCAA+TGG | - | chr6_2:63495596-63495615 | Msa0923350:intron | 30.0% | |
| TCTTGCATATACTGATCAAT+GGG | - | chr6_2:63495597-63495616 | Msa0923350:intron | 30.0% | |
| GGAGAAAATATTTACCACAA+TGG | + | chr6_2:63495755-63495774 | None:intergenic | 30.0% | |
| ! | TCACAATGGCAAAGTAATTT+TGG | + | chr6_2:63495989-63496008 | None:intergenic | 30.0% |
| AAATCAATCTTTGACAACAC+TGG | - | chr6_2:63496657-63496676 | Msa0923350:CDS | 30.0% | |
| TGCACATGAACAGATATTAA+AGG | - | chr6_2:63496980-63496999 | Msa0923350:CDS | 30.0% | |
| !! | TATCAGGTTGAAACAAATCT+TGG | + | chr6_2:63497076-63497095 | None:intergenic | 30.0% |
| ACAAACTTTCTCCAATTATC+AGG | + | chr6_2:63497092-63497111 | None:intergenic | 30.0% | |
| TTTGTGAAGAAGATGAAAGA+AGG | - | chr6_2:63497116-63497135 | Msa0923350:CDS | 30.0% | |
| TTGTGAAGAAGATGAAAGAA+GGG | - | chr6_2:63497117-63497136 | Msa0923350:CDS | 30.0% | |
| !! | GAAAAGTGCCAATAAATGTT+GGG | - | chr6_2:63497139-63497158 | Msa0923350:CDS | 30.0% |
| CAATCTTTAGGCACAAAATT+AGG | + | chr6_2:63497316-63497335 | None:intergenic | 30.0% | |
| ! | GGGTAACAAATAGAAGTTTT+AGG | + | chr6_2:63497392-63497411 | None:intergenic | 30.0% |
| ! | TTTTATAAGGAAAGGGAGAG+AGG | + | chr6_2:63491301-63491320 | None:intergenic | 35.0% |
| !! | TTGTTTTACTTTGCTGGACA+TGG | + | chr6_2:63491359-63491378 | None:intergenic | 35.0% |
| !! | GATGTTGATTCAATCGGTAT+CGG | + | chr6_2:63491502-63491521 | None:intergenic | 35.0% |
| !! | TCGGTTGATGTTGATTCAAT+CGG | + | chr6_2:63491508-63491527 | None:intergenic | 35.0% |
| GTATATGGAGCTTATGGAAA+TGG | - | chr6_2:63491954-63491973 | Msa0923350:CDS | 35.0% | |
| ! | ATGTCTTTTCATCAATGTGG+TGG | - | chr6_2:63492009-63492028 | Msa0923350:CDS | 35.0% |
| TAGCATTAGCCAACATGTTA+AGG | - | chr6_2:63492209-63492228 | Msa0923350:CDS | 35.0% | |
| AGCATTAGCCAACATGTTAA+GGG | - | chr6_2:63492210-63492229 | Msa0923350:CDS | 35.0% | |
| TATCTTAACATGTGCCCTAA+GGG | + | chr6_2:63492256-63492275 | None:intergenic | 35.0% | |
| GCATAACACTGTTGTGTTAA+AGG | - | chr6_2:63492409-63492428 | Msa0923350:CDS | 35.0% | |
| AAAAATGCTAAATGGCACGA+TGG | + | chr6_2:63492606-63492625 | None:intergenic | 35.0% | |
| TAGTCACAAAACGTATAAGG+TGG | + | chr6_2:63492651-63492670 | None:intergenic | 35.0% | |
| CATATGTGAAGTGGTTGATT+TGG | + | chr6_2:63492708-63492727 | None:intergenic | 35.0% | |
| GTACATTAGCATATGTGAAG+TGG | + | chr6_2:63492717-63492736 | None:intergenic | 35.0% | |
| !!! | GACATGTATTTTGAAACGGA+AGG | - | chr6_2:63492915-63492934 | Msa0923350:intron | 35.0% |
| AACTATTCAATGTGCTTCAG+TGG | - | chr6_2:63493436-63493455 | Msa0923350:intron | 35.0% | |
| TCATATTTGGCTAACTCTAG+AGG | + | chr6_2:63493780-63493799 | None:intergenic | 35.0% | |
| TTATACCAAAAACCTTTCCC+GGG | + | chr6_2:63494125-63494144 | None:intergenic | 35.0% | |
| CTTATACCAAAAACCTTTCC+CGG | + | chr6_2:63494126-63494145 | None:intergenic | 35.0% | |
| CCCCATAAGTTGTCAATTAA+AGG | - | chr6_2:63494281-63494300 | Msa0923350:intron | 35.0% | |
| TGAGCTTAACTCAATTGGTA+TGG | - | chr6_2:63494344-63494363 | Msa0923350:intron | 35.0% | |
| GCATAATATATGGAAGGTTC+GGG | - | chr6_2:63494372-63494391 | Msa0923350:intron | 35.0% | |
| CATAATATATGGAAGGTTCG+GGG | - | chr6_2:63494373-63494392 | Msa0923350:intron | 35.0% | |
| !!! | TTTTTTTTTTGTTGGTGGCC+GGG | + | chr6_2:63494406-63494425 | None:intergenic | 35.0% |
| !! | TGGTTTTGCTTTTCTTTCGA+AGG | - | chr6_2:63494592-63494611 | Msa0923350:intron | 35.0% |
| !! | GGTTTTGCTTTTCTTTCGAA+GGG | - | chr6_2:63494593-63494612 | Msa0923350:intron | 35.0% |
| ! | AGAAGAAAAAAAGGCGTGTA+AGG | - | chr6_2:63495047-63495066 | Msa0923350:intron | 35.0% |
| ! | GAAAAAGTTTGGTTTCGTGA+TGG | - | chr6_2:63495107-63495126 | Msa0923350:intron | 35.0% |
| !! | TGATTCATGGGAATTGGTTT+TGG | + | chr6_2:63495161-63495180 | None:intergenic | 35.0% |
| TTGATGTGATTCATGGGAAT+TGG | + | chr6_2:63495167-63495186 | None:intergenic | 35.0% | |
| !! | ACATAGATAGTCCACTTTTG+TGG | + | chr6_2:63495195-63495214 | None:intergenic | 35.0% |
| CTGTCACACACAACAATAAT+TGG | + | chr6_2:63495529-63495548 | None:intergenic | 35.0% | |
| ACAGTATTCCTTTGCCTAAA+TGG | - | chr6_2:63495545-63495564 | Msa0923350:intron | 35.0% | |
| CAGTATTCCTTTGCCTAAAT+GGG | - | chr6_2:63495546-63495565 | Msa0923350:intron | 35.0% | |
| TGATCAGTATATGCAAGATC+AGG | + | chr6_2:63495595-63495614 | None:intergenic | 35.0% | |
| CTTGCATATACTGATCAATG+GGG | - | chr6_2:63495598-63495617 | Msa0923350:intron | 35.0% | |
| TGATACTTTACCTGTACTCA+AGG | - | chr6_2:63495654-63495673 | Msa0923350:intron | 35.0% | |
| GATACTTTACCTGTACTCAA+GGG | - | chr6_2:63495655-63495674 | Msa0923350:intron | 35.0% | |
| GACAATTTCAAACACCTTCT+TGG | - | chr6_2:63495724-63495743 | Msa0923350:intron | 35.0% | |
| TGGTGATAGAACATCAAGTA+AGG | + | chr6_2:63496176-63496195 | None:intergenic | 35.0% | |
| TTCTATCACCATCACAATTC+AGG | - | chr6_2:63496185-63496204 | Msa0923350:intron | 35.0% | |
| TTGGATTTCCTGAATTGTGA+TGG | + | chr6_2:63496196-63496215 | None:intergenic | 35.0% | |
| ACAATTCAGGAAATCCAAGT+TGG | - | chr6_2:63496198-63496217 | Msa0923350:intron | 35.0% | |
| AATGGAACATGGAAATTTCC+AGG | - | chr6_2:63496267-63496286 | Msa0923350:intron | 35.0% | |
| ACATGGAAATTTCCAGGAAT+TGG | - | chr6_2:63496273-63496292 | Msa0923350:intron | 35.0% | |
| TGCTTTCCAATGCTATGATA+AGG | - | chr6_2:63496296-63496315 | Msa0923350:intron | 35.0% | |
| GAAAGAGTTCAAAAGGATGA+GGG | + | chr6_2:63496349-63496368 | None:intergenic | 35.0% | |
| AGAAAGAGTTCAAAAGGATG+AGG | + | chr6_2:63496350-63496369 | None:intergenic | 35.0% | |
| ATGCTGCAAATAAGTCAGAA+TGG | - | chr6_2:63496469-63496488 | Msa0923350:intron | 35.0% | |
| TGCTGCAAATAAGTCAGAAT+GGG | - | chr6_2:63496470-63496489 | Msa0923350:intron | 35.0% | |
| !! | ACTAACTTTTTCCGCAAAGA+AGG | - | chr6_2:63496543-63496562 | Msa0923350:intron | 35.0% |
| ACAAATCTTGGTTCATCCTA+AGG | + | chr6_2:63497064-63497083 | None:intergenic | 35.0% | |
| !! | GGAAAAGTGCCAATAAATGT+TGG | - | chr6_2:63497138-63497157 | Msa0923350:CDS | 35.0% |
| ATTAGGAAACAGTCACAAGT+AGG | - | chr6_2:63497264-63497283 | Msa0923350:intron | 35.0% | |
| TGATCTTGTTGCCATACATA+AGG | - | chr6_2:63497486-63497505 | Msa0923350:five_prime_UTR | 35.0% | |
| TACACGTGTCACATAACCAA+TGG | - | chr6_2:63491237-63491256 | Msa0923350:three_prime_UTR | 40.0% | |
| GCGTTGAACATGACTCAAAT+AGG | - | chr6_2:63491460-63491479 | Msa0923350:CDS | 40.0% | |
| ACTCAAATAGGTAGTCTCGT+CGG | - | chr6_2:63491472-63491491 | Msa0923350:CDS | 40.0% | |
| AATCAGACCAGATCTGACAT+CGG | - | chr6_2:63491675-63491694 | Msa0923350:CDS | 40.0% | |
| ! | TGAAGCATTAACGAAGGATG+TGG | - | chr6_2:63491702-63491721 | Msa0923350:CDS | 40.0% |
| AAGACGAAGAAAGAGAAGAG+TGG | - | chr6_2:63491751-63491770 | Msa0923350:CDS | 40.0% | |
| GAATGGTGTGAATAGGAAGA+AGG | - | chr6_2:63491819-63491838 | Msa0923350:CDS | 40.0% | |
| AGAAGCCAGGTGAGTATAAT+TGG | - | chr6_2:63491926-63491945 | Msa0923350:CDS | 40.0% | |
| GAAGCCAGGTGAGTATAATT+GGG | - | chr6_2:63491927-63491946 | Msa0923350:CDS | 40.0% | |
| AAGCCAGGTGAGTATAATTG+GGG | - | chr6_2:63491928-63491947 | Msa0923350:CDS | 40.0% | |
| GTATAATTGGGGTGGGTATA+TGG | - | chr6_2:63491939-63491958 | Msa0923350:CDS | 40.0% | |
| ATGGAAATGGCGAAGAAACA+TGG | - | chr6_2:63491967-63491986 | Msa0923350:CDS | 40.0% | |
| TGGAAATGGCGAAGAAACAT+GGG | - | chr6_2:63491968-63491987 | Msa0923350:CDS | 40.0% | |
| GAAACATGGGCTTAAAGTTC+AGG | - | chr6_2:63491981-63492000 | Msa0923350:CDS | 40.0% | |
| TTAGCCAACATGTTAAGGGA+AGG | - | chr6_2:63492214-63492233 | Msa0923350:CDS | 40.0% | |
| TAGCCAACATGTTAAGGGAA+GGG | - | chr6_2:63492215-63492234 | Msa0923350:CDS | 40.0% | |
| !! | TAGTGTTAACTTGTGCCCTT+AGG | - | chr6_2:63492238-63492257 | Msa0923350:intron | 40.0% |
| !! | AGTGTTAACTTGTGCCCTTA+GGG | - | chr6_2:63492239-63492258 | Msa0923350:intron | 40.0% |
| GTATCTTAACATGTGCCCTA+AGG | + | chr6_2:63492257-63492276 | None:intergenic | 40.0% | |
| AAAAGATGAGAGGATGAGAG+AGG | - | chr6_2:63492369-63492388 | Msa0923350:intron | 40.0% | |
| TTGTGCCTTTACAAAATCCC+AGG | - | chr6_2:63493276-63493295 | Msa0923350:intron | 40.0% | |
| TGTGCCTTTACAAAATCCCA+GGG | - | chr6_2:63493277-63493296 | Msa0923350:intron | 40.0% | |
| TATTGTGAGTGTAGGGACTT+CGG | - | chr6_2:63493469-63493488 | Msa0923350:intron | 40.0% | |
| AAATCACTCATCACTCTGGT+GGG | + | chr6_2:63493501-63493520 | None:intergenic | 40.0% | |
| AAAATCACTCATCACTCTGG+TGG | + | chr6_2:63493502-63493521 | None:intergenic | 40.0% | |
| GAGGACAGCATACAAAAAAG+AGG | + | chr6_2:63494323-63494342 | None:intergenic | 40.0% | |
| !!! | TTTTTTTTTGTTGGTGGCCG+GGG | + | chr6_2:63494405-63494424 | None:intergenic | 40.0% |
| ! | ATGAGCTTGCCATGTGTTTT+GGG | - | chr6_2:63494520-63494539 | Msa0923350:intron | 40.0% |
| ACATACAAGTGAAGGGGTTA+GGG | + | chr6_2:63494909-63494928 | None:intergenic | 40.0% | |
| ! | TGGTTTCGTGATGGAAAAGT+AGG | - | chr6_2:63495116-63495135 | Msa0923350:intron | 40.0% |
| GCGATGTTGATGTGATTCAT+GGG | + | chr6_2:63495173-63495192 | None:intergenic | 40.0% | |
| ATCTCTTCTACAGCCCATTT+AGG | + | chr6_2:63495562-63495581 | None:intergenic | 40.0% | |
| !! | TAAATGGGCTGTAGAAGAGA+TGG | - | chr6_2:63495561-63495580 | Msa0923350:intron | 40.0% |
| TGATTTCATGCGTGCTTTCA+GGG | - | chr6_2:63495702-63495721 | Msa0923350:intron | 40.0% | |
| ! | TCAGGAAATCCAAGTTGGAA+TGG | - | chr6_2:63496203-63496222 | Msa0923350:intron | 40.0% |
| ! | CAGGAAATCCAAGTTGGAAT+GGG | - | chr6_2:63496204-63496223 | Msa0923350:intron | 40.0% |
| !! | CATTTTGCTCTGGGTATGAT+GGG | + | chr6_2:63496251-63496270 | None:intergenic | 40.0% |
| ! | TCCATGTTCCATTTTGCTCT+GGG | + | chr6_2:63496260-63496279 | None:intergenic | 40.0% |
| ! | TTCCATGTTCCATTTTGCTC+TGG | + | chr6_2:63496261-63496280 | None:intergenic | 40.0% |
| GCTGCAAATAAGTCAGAATG+GGG | - | chr6_2:63496471-63496490 | Msa0923350:intron | 40.0% | |
| CGGAAAAAGTTAGTGTCTTC+TGG | + | chr6_2:63496537-63496556 | None:intergenic | 40.0% | |
| !! | AACTTTTTCCGCAAAGAAGG+TGG | - | chr6_2:63496546-63496565 | Msa0923350:intron | 40.0% |
| ! | ACGGTGAATTTTTCCTCACA+TGG | - | chr6_2:63496586-63496605 | Msa0923350:intron | 40.0% |
| TCTCAAATGCTGTTGAACCA+TGG | - | chr6_2:63496612-63496631 | Msa0923350:intron | 40.0% | |
| AAGATATCCGTGAAAGTTGC+CGG | - | chr6_2:63496684-63496703 | Msa0923350:CDS | 40.0% | |
| ATGAATACCGGCAACTTTCA+CGG | + | chr6_2:63496694-63496713 | None:intergenic | 40.0% | |
| TGAAAGTTGCCGGTATTCAT+TGG | - | chr6_2:63496694-63496713 | Msa0923350:CDS | 40.0% | |
| ACCATAGTGCCAATGAATAC+CGG | + | chr6_2:63496706-63496725 | None:intergenic | 40.0% | |
| TTCATTGGCACTATGGTACA+AGG | - | chr6_2:63496709-63496728 | Msa0923350:CDS | 40.0% | |
| TAATACCCTGCTGTTAGTTC+CGG | + | chr6_2:63496744-63496763 | None:intergenic | 40.0% | |
| TAGATGAACCTGTGCTTTCT+GGG | + | chr6_2:63496925-63496944 | None:intergenic | 40.0% | |
| TGTGTGCATTCACATACCTT+AGG | - | chr6_2:63497045-63497064 | Msa0923350:CDS | 40.0% | |
| CACTTGCTCCCAACATTTAT+TGG | + | chr6_2:63497150-63497169 | None:intergenic | 40.0% | |
| CAATAAATGTTGGGAGCAAG+TGG | - | chr6_2:63497148-63497167 | Msa0923350:CDS | 40.0% | |
| TAGGCACAAAATTAGGCTGA+TGG | + | chr6_2:63497309-63497328 | None:intergenic | 40.0% | |
| TCTTGTTGCCATACATAAGG+TGG | - | chr6_2:63497489-63497508 | Msa0923350:five_prime_UTR | 40.0% | |
| !! | AATGATGGACGGTAGAGTAC+AGG | + | chr6_2:63491200-63491219 | None:intergenic | 45.0% |
| AAGGAAAGGGAGAGAGGTTA+AGG | + | chr6_2:63491295-63491314 | None:intergenic | 45.0% | |
| TGACAACGTAGATTCGTTGC+TGG | + | chr6_2:63491574-63491593 | None:intergenic | 45.0% | |
| GGTGATCTACATGGACTCAT+CGG | + | chr6_2:63491637-63491656 | None:intergenic | 45.0% | |
| GATGAGTCCATGTAGATCAC+CGG | - | chr6_2:63491636-63491655 | Msa0923350:CDS | 45.0% | |
| TGTCAGATCTGGTCTGATTC+CGG | + | chr6_2:63491674-63491693 | None:intergenic | 45.0% | |
| ! | GGCTTGTGAAGCATTAACGA+AGG | - | chr6_2:63491696-63491715 | Msa0923350:CDS | 45.0% |
| AGCATTAACGAAGGATGTGG+TGG | - | chr6_2:63491705-63491724 | Msa0923350:CDS | 45.0% | |
| GTGGAGAATGAGTTTGTAGC+TGG | - | chr6_2:63491724-63491743 | Msa0923350:CDS | 45.0% | |
| GAGAATGAGTTTGTAGCTGG+AGG | - | chr6_2:63491727-63491746 | Msa0923350:CDS | 45.0% | |
| AACGGCATCATCACATACAC+CGG | + | chr6_2:63491781-63491800 | None:intergenic | 45.0% | |
| CCCATCGTCACACTATCTAA+CGG | + | chr6_2:63491799-63491818 | None:intergenic | 45.0% | |
| CCGTTAGATAGTGTGACGAT+GGG | - | chr6_2:63491796-63491815 | Msa0923350:CDS | 45.0% | |
| CGTTAGATAGTGTGACGATG+GGG | - | chr6_2:63491797-63491816 | Msa0923350:CDS | 45.0% | |
| TGGTGTGAATAGGAAGAAGG+CGG | - | chr6_2:63491822-63491841 | Msa0923350:CDS | 45.0% | |
| CAGGTGAGTATAATTGGGGT+GGG | - | chr6_2:63491932-63491951 | Msa0923350:CDS | 45.0% | |
| ACATGGGCTTAAAGTTCAGG+CGG | - | chr6_2:63491984-63492003 | Msa0923350:CDS | 45.0% | |
| ! | CATCAATGTGGTGGTAACGT+TGG | - | chr6_2:63492018-63492037 | Msa0923350:CDS | 45.0% |
| CTACCCTTCCCTTAACATGT+TGG | + | chr6_2:63492221-63492240 | None:intergenic | 45.0% | |
| TCGTGCTAAACACACGAATG+TGG | + | chr6_2:63492578-63492597 | None:intergenic | 45.0% | |
| TTCAATGTGCTTCAGTGGCA+CGG | - | chr6_2:63493441-63493460 | Msa0923350:intron | 45.0% | |
| ! | GGAGGTGTATTGTGAGTGTA+GGG | - | chr6_2:63493462-63493481 | Msa0923350:intron | 45.0% |
| TCTCAACAAATTCGTAGGCC+CGG | + | chr6_2:63493607-63493626 | None:intergenic | 45.0% | |
| GGCTGTCTCAACAAATTCGT+AGG | + | chr6_2:63493612-63493631 | None:intergenic | 45.0% | |
| ! | GTTGCATTGGGTTGCCAAAT+TGG | + | chr6_2:63494011-63494030 | None:intergenic | 45.0% |
| TTTGATGTCGTATTCCAGCC+CGG | - | chr6_2:63494104-63494123 | Msa0923350:intron | 45.0% | |
| CCAATTGAGTTAAGCTCACG+AGG | + | chr6_2:63494342-63494361 | None:intergenic | 45.0% | |
| CCTCGTGAGCTTAACTCAAT+TGG | - | chr6_2:63494339-63494358 | Msa0923350:intron | 45.0% | |
| ! | GATGAGCTTGCCATGTGTTT+TGG | - | chr6_2:63494519-63494538 | Msa0923350:intron | 45.0% |
| ! | TGAGCTTGCCATGTGTTTTG+GGG | - | chr6_2:63494521-63494540 | Msa0923350:intron | 45.0% |
| AAGTCCAACCCCAAAACACA+TGG | + | chr6_2:63494532-63494551 | None:intergenic | 45.0% | |
| !!! | ATGTGTTTTGGGGTTGGACT+TGG | - | chr6_2:63494531-63494550 | Msa0923350:intron | 45.0% |
| CACATACAAGTGAAGGGGTT+AGG | + | chr6_2:63494910-63494929 | None:intergenic | 45.0% | |
| GGCGATGTTGATGTGATTCA+TGG | + | chr6_2:63495174-63495193 | None:intergenic | 45.0% | |
| CATCAACATCGCCACAAAAG+TGG | - | chr6_2:63495181-63495200 | Msa0923350:intron | 45.0% | |
| TCTACAGCCCATTTAGGCAA+AGG | + | chr6_2:63495556-63495575 | None:intergenic | 45.0% | |
| CTGATTTCATGCGTGCTTTC+AGG | - | chr6_2:63495701-63495720 | Msa0923350:intron | 45.0% | |
| !! | CCATTTTGCTCTGGGTATGA+TGG | + | chr6_2:63496252-63496271 | None:intergenic | 45.0% |
| CCATCATACCCAGAGCAAAA+TGG | - | chr6_2:63496249-63496268 | Msa0923350:intron | 45.0% | |
| ACCCAGAGCAAAATGGAACA+TGG | - | chr6_2:63496256-63496275 | Msa0923350:intron | 45.0% | |
| !! | CATTGGAAAGCACCAATTCC+TGG | + | chr6_2:63496288-63496307 | None:intergenic | 45.0% |
| TAAGTCAGAATGGGGAAGCA+CGG | - | chr6_2:63496479-63496498 | Msa0923350:intron | 45.0% | |
| TTGTACTCACCTGCATCAGT+AGG | + | chr6_2:63496507-63496526 | None:intergenic | 45.0% | |
| ATGCAGGTGAGTACAACAAC+TGG | - | chr6_2:63496511-63496530 | Msa0923350:intron | 45.0% | |
| ! | TTTTTCCGCAAAGAAGGTGG+AGG | - | chr6_2:63496549-63496568 | Msa0923350:intron | 45.0% |
| !! | GCATTTGAGAGTACCATGTG+AGG | + | chr6_2:63496602-63496621 | None:intergenic | 45.0% |
| ATGTGAGAATCCTCTCACCA+TGG | + | chr6_2:63496632-63496651 | None:intergenic | 45.0% | |
| CCAACATTTGAGCGATTGGA+AGG | + | chr6_2:63496791-63496810 | None:intergenic | 45.0% | |
| CCTTCCAATCGCTCAAATGT+TGG | - | chr6_2:63496788-63496807 | Msa0923350:CDS | 45.0% | |
| ACTTGATTCACGAGCTTCTC+CGG | + | chr6_2:63496891-63496910 | None:intergenic | 45.0% | |
| ! | TTTAGCTACCCAGAAAGCAC+AGG | - | chr6_2:63496914-63496933 | Msa0923350:CDS | 45.0% |
| CTAGATGAACCTGTGCTTTC+TGG | + | chr6_2:63496926-63496945 | None:intergenic | 45.0% | |
| AAAGCACAGGTTCATCTAGC+CGG | - | chr6_2:63496927-63496946 | Msa0923350:CDS | 45.0% | |
| TGTGCATGTTCATCATACCG+TGG | + | chr6_2:63496966-63496985 | None:intergenic | 45.0% | |
| GTTGAATGTCGAGGGTAACT+CGG | - | chr6_2:63497010-63497029 | Msa0923350:CDS | 45.0% | |
| AGGAAACAGTCACAAGTAGG+TGG | - | chr6_2:63497267-63497286 | Msa0923350:intron | 45.0% | |
| !! | TAGATAATTAAAAATATTAA+CGG | + | chr6_2:63492748-63492767 | None:intergenic | 5.0% |
| AACGGTGGAGATGGTGTGAA+TGG | + | chr6_2:63491177-63491196 | None:intergenic | 50.0% | |
| TGGACGGTAGAGTACAGGAA+CGG | + | chr6_2:63491195-63491214 | None:intergenic | 50.0% | |
| ! | TTGCGTGGAGGAATGATGGA+CGG | + | chr6_2:63491211-63491230 | None:intergenic | 50.0% |
| AGTGTTGCGTGGAGGAATGA+TGG | + | chr6_2:63491215-63491234 | None:intergenic | 50.0% | |
| !! | ACACGTGTAAGAGTGTTGCG+TGG | + | chr6_2:63491226-63491245 | None:intergenic | 50.0% |
| ! | CATGGAAGCAGTTGTTGGCT+CGG | + | chr6_2:63491527-63491546 | None:intergenic | 50.0% |
| GCGTTCATGGAAGCAGTTGT+TGG | + | chr6_2:63491532-63491551 | None:intergenic | 50.0% | |
| GATCTACATGGACTCATCGG+CGG | + | chr6_2:63491634-63491653 | None:intergenic | 50.0% | |
| !! | CCTAGTACCGGTGATCTACA+TGG | + | chr6_2:63491646-63491665 | None:intergenic | 50.0% |
| CCATGTAGATCACCGGTACT+AGG | - | chr6_2:63491643-63491662 | Msa0923350:CDS | 50.0% | |
| TGTAGATCACCGGTACTAGG+CGG | - | chr6_2:63491646-63491665 | Msa0923350:CDS | 50.0% | |
| TCACAAGCCGATGTCAGATC+TGG | + | chr6_2:63491685-63491704 | None:intergenic | 50.0% | |
| GAAAGAGAAGAGTGGAGTCC+CGG | - | chr6_2:63491759-63491778 | Msa0923350:CDS | 50.0% | |
| ACGGCATCATCACATACACC+GGG | + | chr6_2:63491780-63491799 | None:intergenic | 50.0% | |
| GCCGTTAGATAGTGTGACGA+TGG | - | chr6_2:63491795-63491814 | Msa0923350:CDS | 50.0% | |
| GATAGTGTGACGATGGGGAA+TGG | - | chr6_2:63491802-63491821 | Msa0923350:CDS | 50.0% | |
| CGATGGGGAATGGTGTGAAT+AGG | - | chr6_2:63491812-63491831 | Msa0923350:CDS | 50.0% | |
| TAGGAAGAAGGCGGTGAATG+CGG | - | chr6_2:63491831-63491850 | Msa0923350:CDS | 50.0% | |
| !! | TGAAGAGTGCTGGTGTGGAA+GGG | - | chr6_2:63491866-63491885 | Msa0923350:CDS | 50.0% |
| !! | AAGGGGTGATGATGGATGTG+TGG | - | chr6_2:63491884-63491903 | Msa0923350:CDS | 50.0% |
| !! | GGTGATGATGGATGTGTGGT+GGG | - | chr6_2:63491888-63491907 | Msa0923350:CDS | 50.0% |
| !! | GTGATGATGGATGTGTGGTG+GGG | - | chr6_2:63491889-63491908 | Msa0923350:CDS | 50.0% |
| CCACCCCAATTATACTCACC+TGG | + | chr6_2:63491934-63491953 | None:intergenic | 50.0% | |
| CCAGGTGAGTATAATTGGGG+TGG | - | chr6_2:63491931-63491950 | Msa0923350:CDS | 50.0% | |
| GGGTGGGTATATGGAGCTTA+TGG | - | chr6_2:63491948-63491967 | Msa0923350:CDS | 50.0% | |
| GATGAGAGGATGAGAGAGGT+AGG | - | chr6_2:63492373-63492392 | Msa0923350:CDS | 50.0% | |
| AGGATGAGAGAGGTAGGTAG+TGG | - | chr6_2:63492379-63492398 | Msa0923350:CDS | 50.0% | |
| ! | GAGAGAGGTAGGTAGTGGTA+AGG | - | chr6_2:63492384-63492403 | Msa0923350:CDS | 50.0% |
| CCTTTACAAAATCCCAGGGC+CGG | - | chr6_2:63493281-63493300 | Msa0923350:intron | 50.0% | |
| ! | GCACTGGGCCTCGAATTTTT+GGG | - | chr6_2:63493331-63493350 | Msa0923350:intron | 50.0% |
| ! | CACTGGGCCTCGAATTTTTG+GGG | - | chr6_2:63493332-63493351 | Msa0923350:intron | 50.0% |
| !! | ACTGGGCCTCGAATTTTTGG+GGG | - | chr6_2:63493333-63493352 | Msa0923350:intron | 50.0% |
| TTTGGGCCCCCAAAAATTCG+AGG | + | chr6_2:63493342-63493361 | None:intergenic | 50.0% | |
| ! | CGGAGGTGTATTGTGAGTGT+AGG | - | chr6_2:63493461-63493480 | Msa0923350:intron | 50.0% |
| TTGATGTCGTATTCCAGCCC+GGG | - | chr6_2:63494105-63494124 | Msa0923350:intron | 50.0% | |
| !!! | CTTGCCATGTGTTTTGGGGT+TGG | - | chr6_2:63494525-63494544 | Msa0923350:intron | 50.0% |
| GCTAGACCGAACAACGTGAT+CGG | - | chr6_2:63494875-63494894 | Msa0923350:intron | 50.0% | |
| CTAGACCGAACAACGTGATC+GGG | - | chr6_2:63494876-63494895 | Msa0923350:intron | 50.0% | |
| TAGACCGAACAACGTGATCG+GGG | - | chr6_2:63494877-63494896 | Msa0923350:intron | 50.0% | |
| CAAACCCCGATCACGTTGTT+CGG | + | chr6_2:63494884-63494903 | None:intergenic | 50.0% | |
| !! | CCACAATGGTGTCACCAAGA+AGG | + | chr6_2:63495741-63495760 | None:intergenic | 50.0% |
| ! | CCTTCTTGGTGACACCATTG+TGG | - | chr6_2:63495738-63495757 | Msa0923350:intron | 50.0% |
| ! | AAGTCAGAATGGGGAAGCAC+GGG | - | chr6_2:63496480-63496499 | Msa0923350:intron | 50.0% |
| TGCTGTTGAACCATGGTGAG+AGG | - | chr6_2:63496619-63496638 | Msa0923350:intron | 50.0% | |
| GCCGGTATTCATTGGCACTA+TGG | - | chr6_2:63496702-63496721 | Msa0923350:CDS | 50.0% | |
| TGGTACAAGGTCTCATGCTC+CGG | - | chr6_2:63496722-63496741 | Msa0923350:CDS | 50.0% | |
| ATGCTCCGGAACTAACAGCA+GGG | - | chr6_2:63496736-63496755 | Msa0923350:CDS | 50.0% | |
| CTCGCCAACATTTGAGCGAT+TGG | + | chr6_2:63496795-63496814 | None:intergenic | 50.0% | |
| GCTCAAATGTTGGCGAGACA+CGG | - | chr6_2:63496798-63496817 | Msa0923350:CDS | 50.0% | |
| TCAGGATGCACAATGTGCAC+CGG | - | chr6_2:63496869-63496888 | Msa0923350:CDS | 50.0% | |
| GGAGAAGCTCGTGAATCAAG+TGG | - | chr6_2:63496890-63496909 | Msa0923350:CDS | 50.0% | |
| AAGCACAGGTTCATCTAGCC+GGG | - | chr6_2:63496928-63496947 | Msa0923350:CDS | 50.0% | |
| GTTACCCTCGACATTCAACG+CGG | + | chr6_2:63497009-63497028 | None:intergenic | 50.0% | |
| AATGTTGGGAGCAAGTGGAG+AGG | - | chr6_2:63497153-63497172 | Msa0923350:CDS | 50.0% | |
| ATGTTGGGAGCAAGTGGAGA+GGG | - | chr6_2:63497154-63497173 | Msa0923350:CDS | 50.0% | |
| TACACAGCCTCTTGTGCAAG+AGG | - | chr6_2:63497199-63497218 | Msa0923350:CDS | 50.0% | |
| GAGTACAGGAACGGTGGAGA+TGG | + | chr6_2:63491186-63491205 | None:intergenic | 55.0% | |
| ACGGTAGAGTACAGGAACGG+TGG | + | chr6_2:63491192-63491211 | None:intergenic | 55.0% | |
| !! | CGTGTAAGAGTGTTGCGTGG+AGG | + | chr6_2:63491223-63491242 | None:intergenic | 55.0% |
| CCATACTGCTGCTGCGTTCA+TGG | + | chr6_2:63491545-63491564 | None:intergenic | 55.0% | |
| CCATGAACGCAGCAGCAGTA+TGG | - | chr6_2:63491542-63491561 | Msa0923350:CDS | 55.0% | |
| ATTCCGGTACCGCCTAGTAC+CGG | + | chr6_2:63491658-63491677 | None:intergenic | 55.0% | |
| !! | CTGAAGAGTGCTGGTGTGGA+AGG | - | chr6_2:63491865-63491884 | Msa0923350:CDS | 55.0% |
| !! | GAAGAGTGCTGGTGTGGAAG+GGG | - | chr6_2:63491867-63491886 | Msa0923350:CDS | 55.0% |
| TGGTGTGGAAGGGGTGATGA+TGG | - | chr6_2:63491876-63491895 | Msa0923350:CDS | 55.0% | |
| !! | GGGTGATGATGGATGTGTGG+TGG | - | chr6_2:63491887-63491906 | Msa0923350:CDS | 55.0% |
| ! | GATGGATGTGTGGTGGGGAT+TGG | - | chr6_2:63491894-63491913 | Msa0923350:CDS | 55.0% |
| ! | CCGGCCCTGGGATTTTGTAA+AGG | + | chr6_2:63493284-63493303 | None:intergenic | 55.0% |
| !! | GGCACTGGGCCTCGAATTTT+TGG | - | chr6_2:63493330-63493349 | Msa0923350:intron | 55.0% |
| AATGTGCTTCAGTGGCACGG+AGG | - | chr6_2:63493444-63493463 | Msa0923350:intron | 55.0% | |
| ! | TCCAGCCCGGGAAAGGTTTT+TGG | - | chr6_2:63494117-63494136 | Msa0923350:intron | 55.0% |
| ACCAAAAACCTTTCCCGGGC+TGG | + | chr6_2:63494121-63494140 | None:intergenic | 55.0% | |
| GGACTTCTGCCCTTGAGTAC+AGG | + | chr6_2:63495667-63495686 | None:intergenic | 55.0% | |
| CAGCTGGTCCCATTCCAACT+TGG | + | chr6_2:63496215-63496234 | None:intergenic | 55.0% | |
| ! | CAAGTTGGAATGGGACCAGC+TGG | - | chr6_2:63496213-63496232 | Msa0923350:intron | 55.0% |
| GGGTAACGTAACTCACCAGC+TGG | + | chr6_2:63496231-63496250 | None:intergenic | 55.0% | |
| CATGCTCCGGAACTAACAGC+AGG | - | chr6_2:63496735-63496754 | Msa0923350:CDS | 55.0% | |
| TACAACACCCGTAACCGCGA+TGG | - | chr6_2:63496762-63496781 | Msa0923350:CDS | 55.0% | |
| AAGGTAGCCATCGCGGTTAC+GGG | + | chr6_2:63496772-63496791 | None:intergenic | 55.0% | |
| GAAGGTAGCCATCGCGGTTA+CGG | + | chr6_2:63496773-63496792 | None:intergenic | 55.0% | |
| CGATTGGAAGGTAGCCATCG+CGG | + | chr6_2:63496779-63496798 | None:intergenic | 55.0% | |
| GGTGCACATTGTGCATCCTG+AGG | + | chr6_2:63496870-63496889 | None:intergenic | 55.0% | |
| AGCACAGGTTCATCTAGCCG+GGG | - | chr6_2:63496929-63496948 | Msa0923350:CDS | 55.0% | |
| !! | CCGTGGCAAAGCATTTTCCC+CGG | + | chr6_2:63496949-63496968 | None:intergenic | 55.0% |
| CCGGGGAAAATGCTTTGCCA+CGG | - | chr6_2:63496946-63496965 | Msa0923350:CDS | 55.0% | |
| GCAACAGCCTCTTGCACAAG+AGG | + | chr6_2:63497209-63497228 | None:intergenic | 55.0% | |
| TCACCGGTACTAGGCGGTAC+CGG | - | chr6_2:63491652-63491671 | Msa0923350:CDS | 60.0% | |
| ! | ATGGCGGCACTGAAGAGTGC+TGG | - | chr6_2:63491856-63491875 | Msa0923350:CDS | 60.0% |
| !! | GGCACTGAAGAGTGCTGGTG+TGG | - | chr6_2:63491861-63491880 | Msa0923350:CDS | 60.0% |
| ! | GGATGTGTGGTGGGGATTGG+TGG | - | chr6_2:63491897-63491916 | Msa0923350:CDS | 60.0% |
| ! | TGTGGTGGGGATTGGTGGAG+AGG | - | chr6_2:63491902-63491921 | Msa0923350:CDS | 60.0% |
| ! | GTGGTGGGGATTGGTGGAGA+GGG | - | chr6_2:63491903-63491922 | Msa0923350:CDS | 60.0% |
| TTGGTGGAGAGGGAGAAGCC+AGG | - | chr6_2:63491913-63491932 | Msa0923350:CDS | 60.0% | |
| AGCCTCAACAGCCTATGGGC+CGG | + | chr6_2:63493303-63493322 | None:intergenic | 60.0% | |
| GCCCATAGGCTGTTGAGGCT+GGG | - | chr6_2:63493303-63493322 | Msa0923350:intron | 60.0% | |
| GCCCAGCCTCAACAGCCTAT+GGG | + | chr6_2:63493307-63493326 | None:intergenic | 60.0% | |
| AGCCCAGCCTCAACAGCCTA+TGG | + | chr6_2:63493308-63493327 | None:intergenic | 60.0% | |
| AGGCTGTTGAGGCTGGGCTA+TGG | - | chr6_2:63493309-63493328 | Msa0923350:intron | 60.0% | |
| TTGAGGCTGGGCTATGGCAC+TGG | - | chr6_2:63493315-63493334 | Msa0923350:intron | 60.0% | |
| TGAGGCTGGGCTATGGCACT+GGG | - | chr6_2:63493316-63493335 | Msa0923350:intron | 60.0% | |
| GTCGTATTCCAGCCCGGGAA+AGG | - | chr6_2:63494110-63494129 | Msa0923350:intron | 60.0% | |
| AAGGTTCGGGGTTCGAACCC+CGG | - | chr6_2:63494385-63494404 | Msa0923350:intron | 60.0% | |
| AGCACGGGACCTACTGATGC+AGG | - | chr6_2:63496495-63496514 | Msa0923350:intron | 60.0% | |
| TCCGCAAAGAAGGTGGAGGC+TGG | - | chr6_2:63496553-63496572 | Msa0923350:intron | 60.0% | |
| CCCAGCCTCCACCTTCTTTG+CGG | + | chr6_2:63496557-63496576 | None:intergenic | 60.0% | |
| CCGCAAAGAAGGTGGAGGCT+GGG | - | chr6_2:63496554-63496573 | Msa0923350:intron | 60.0% | |
| GGAGGCTGGGACAGCGAATA+CGG | - | chr6_2:63496567-63496586 | Msa0923350:intron | 60.0% | |
| GCGTCCGCGTTGAATGTCGA+GGG | - | chr6_2:63497002-63497021 | Msa0923350:CDS | 60.0% | |
| GAAGGCGGTGAATGCGGCGA+TGG | - | chr6_2:63491837-63491856 | Msa0923350:CDS | 65.0% | |
| AAATCCCAGGGCCGGCCCAT+AGG | - | chr6_2:63493289-63493308 | Msa0923350:intron | 65.0% | |
| GGCCCATAGGCTGTTGAGGC+TGG | - | chr6_2:63493302-63493321 | Msa0923350:intron | 65.0% | |
| GCGTGATCACGAGCAGCCTC+AGG | - | chr6_2:63496851-63496870 | Msa0923350:CDS | 65.0% | |
| GGCGTCCGCGTTGAATGTCG+AGG | - | chr6_2:63497001-63497020 | Msa0923350:CDS | 65.0% | |
| GGCGGTGAATGCGGCGATGG+CGG | - | chr6_2:63491840-63491859 | Msa0923350:CDS | 70.0% | |
| ACAGCCTATGGGCCGGCCCT+GGG | + | chr6_2:63493296-63493315 | None:intergenic | 70.0% | |
| AACAGCCTATGGGCCGGCCC+TGG | + | chr6_2:63493297-63493316 | None:intergenic | 70.0% | |
| GGCCGGCCCATAGGCTGTTG+AGG | - | chr6_2:63493298-63493317 | Msa0923350:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_2 | gene | 63491147 | 63497542 | 63491147 | ID=Msa0923350;Name=Msa0923350 |
| chr6_2 | mRNA | 63491147 | 63497542 | 63491147 | ID=Msa0923350-mRNA-1;Parent=Msa0923350;Name=Msa0923350-mRNA-1;_AED=0.03;_eAED=0.03;_QI=281|1|1|1|0.75|0.6|5|301|573 |
| chr6_2 | exon | 63491147 | 63492251 | 63491147 | ID=Msa0923350-mRNA-1:exon:9923;Parent=Msa0923350-mRNA-1 |
| chr6_2 | exon | 63492372 | 63492482 | 63492372 | ID=Msa0923350-mRNA-1:exon:9922;Parent=Msa0923350-mRNA-1 |
| chr6_2 | exon | 63492930 | 63493140 | 63492930 | ID=Msa0923350-mRNA-1:exon:9921;Parent=Msa0923350-mRNA-1 |
| chr6_2 | exon | 63496637 | 63497260 | 63496637 | ID=Msa0923350-mRNA-1:exon:9920;Parent=Msa0923350-mRNA-1 |
| chr6_2 | exon | 63497290 | 63497542 | 63497290 | ID=Msa0923350-mRNA-1:exon:9919;Parent=Msa0923350-mRNA-1 |
| chr6_2 | five_prime_UTR | 63497290 | 63497542 | 63497290 | ID=Msa0923350-mRNA-1:five_prime_utr;Parent=Msa0923350-mRNA-1 |
| chr6_2 | five_prime_UTR | 63497233 | 63497260 | 63497233 | ID=Msa0923350-mRNA-1:five_prime_utr;Parent=Msa0923350-mRNA-1 |
| chr6_2 | CDS | 63496637 | 63497232 | 63496637 | ID=Msa0923350-mRNA-1:cds;Parent=Msa0923350-mRNA-1 |
| chr6_2 | CDS | 63492930 | 63493140 | 63492930 | ID=Msa0923350-mRNA-1:cds;Parent=Msa0923350-mRNA-1 |
| chr6_2 | CDS | 63492372 | 63492482 | 63492372 | ID=Msa0923350-mRNA-1:cds;Parent=Msa0923350-mRNA-1 |
| chr6_2 | CDS | 63491448 | 63492251 | 63491448 | ID=Msa0923350-mRNA-1:cds;Parent=Msa0923350-mRNA-1 |
| chr6_2 | three_prime_UTR | 63491147 | 63491447 | 63491147 | ID=Msa0923350-mRNA-1:three_prime_utr;Parent=Msa0923350-mRNA-1 |
| Gene Sequence |
| Protein sequence |
