Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0896370 | XP_024641831.1 | 96.859 | 573 | 17 | 1 | 1 | 573 | 1 | 572 | 0.0 | 1173 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0896370 | sp|Q9LIR6|BAM1_ARATH | 72.526 | 586 | 137 | 9 | 1 | 573 | 1 | 575 | 0.0 | 856 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0896370 | A0A396HGL2 | 96.859 | 573 | 17 | 1 | 1 | 573 | 1 | 572 | 0.0 | 1173 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0542360 | Msa0896370 | 0.802943 | 4.412251e-49 | -8.615850e-47 |
| Msa0866800 | Msa0896370 | 0.800588 | 1.343296e-48 | -8.615850e-47 |
| Msa0896370 | Msa0923350 | 0.951167 | 3.610739e-109 | -8.615850e-47 |
| Msa0896370 | Msa0982590 | 0.801342 | 9.420630e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0896370 | MtrunA17_Chr6g0481031 | 96.859 | 573 | 17 | 1 | 1 | 573 | 1 | 572 | 0.0 | 1173 |
| Msa0896370 | MtrunA17_Chr5g0399991 | 64.286 | 434 | 143 | 2 | 107 | 540 | 89 | 510 | 0.0 | 618 |
| Msa0896370 | MtrunA17_Chr5g0400001 | 63.825 | 434 | 145 | 2 | 107 | 540 | 87 | 508 | 0.0 | 614 |
| Msa0896370 | MtrunA17_Chr4g0055281 | 60.768 | 469 | 175 | 4 | 107 | 572 | 78 | 540 | 0.0 | 601 |
| Msa0896370 | MtrunA17_Chr4g0023601 | 52.184 | 435 | 199 | 6 | 107 | 537 | 13 | 442 | 8.36e-160 | 465 |
| Msa0896370 | MtrunA17_Chr2g0323051 | 47.835 | 462 | 225 | 8 | 107 | 564 | 86 | 535 | 2.89e-152 | 449 |
| Msa0896370 | MtrunA17_Chr8g0388651 | 48.984 | 443 | 220 | 4 | 101 | 540 | 73 | 512 | 2.08e-151 | 446 |
| Msa0896370 | MtrunA17_Chr7g0247631 | 45.642 | 436 | 224 | 8 | 107 | 537 | 265 | 692 | 1.65e-123 | 379 |
| Msa0896370 | MtrunA17_Chr2g0286431 | 39.286 | 448 | 257 | 6 | 96 | 541 | 71 | 505 | 7.41e-110 | 338 |
| Msa0896370 | MtrunA17_Chr5g0408851 | 38.293 | 410 | 244 | 7 | 107 | 514 | 218 | 620 | 5.38e-98 | 311 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0896370 | AT3G23920.1 | 72.526 | 586 | 137 | 9 | 1 | 573 | 1 | 575 | 0.0 | 856 |
| Msa0896370 | AT4G17090.1 | 58.522 | 487 | 196 | 3 | 83 | 569 | 62 | 542 | 0.0 | 611 |
| Msa0896370 | AT4G15210.1 | 49.083 | 436 | 212 | 7 | 107 | 537 | 14 | 444 | 4.96e-148 | 436 |
| Msa0896370 | AT2G32290.1 | 45.534 | 459 | 239 | 5 | 107 | 564 | 78 | 526 | 1.24e-141 | 422 |
| Msa0896370 | AT4G00490.1 | 48.853 | 436 | 210 | 8 | 107 | 537 | 95 | 522 | 1.28e-141 | 421 |
| Msa0896370 | AT4G15210.2 | 51.157 | 389 | 184 | 5 | 107 | 493 | 14 | 398 | 2.41e-140 | 413 |
| Msa0896370 | AT4G15210.3 | 49.747 | 396 | 190 | 6 | 146 | 537 | 1 | 391 | 2.75e-138 | 409 |
| Msa0896370 | AT4G15210.4 | 49.747 | 396 | 190 | 6 | 146 | 537 | 1 | 391 | 2.75e-138 | 409 |
| Msa0896370 | AT5G55700.1 | 42.630 | 441 | 238 | 4 | 107 | 537 | 92 | 527 | 7.45e-128 | 385 |
| Msa0896370 | AT2G45880.1 | 39.300 | 514 | 292 | 9 | 37 | 537 | 169 | 675 | 1.50e-120 | 372 |
| Msa0896370 | AT5G55700.2 | 44.073 | 329 | 173 | 3 | 215 | 537 | 41 | 364 | 1.88e-98 | 304 |
| Msa0896370 | AT5G45300.2 | 40.678 | 413 | 230 | 8 | 107 | 514 | 253 | 655 | 3.49e-98 | 313 |
| Msa0896370 | AT5G45300.1 | 40.678 | 413 | 230 | 8 | 107 | 514 | 255 | 657 | 4.11e-98 | 313 |
| Msa0896370 | AT5G45300.3 | 40.678 | 413 | 230 | 8 | 107 | 514 | 269 | 671 | 4.55e-98 | 313 |
| Msa0896370 | AT5G18670.1 | 34.937 | 478 | 287 | 9 | 82 | 555 | 63 | 520 | 1.13e-90 | 289 |
Find 199 sgRNAs with CRISPR-Local
Find 373 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGATTTCATGCGTGCTTTC+AGG | 0.088797 | 6_1:+86439348 | Msa0896370:CDS |
| CACTTGCTCCCAACATTTAT+TGG | 0.108972 | 6_1:-86440782 | None:intergenic |
| CTAGATGAACCTGTGCTTTC+TGG | 0.113345 | 6_1:-86440558 | None:intergenic |
| ACAGTATTCCTTTGCCTAAA+TGG | 0.156296 | 6_1:+86439192 | Msa0896370:intron |
| AGAAGCCAGGGGAGTATAAT+TGG | 0.218279 | 6_1:+86435888 | Msa0896370:CDS |
| TATAATTAAATACACTTATA+TGG | 0.222833 | 6_1:+86441049 | Msa0896370:three_prime_UTR |
| AAAATTGTATTATAACTTAT+AGG | 0.226240 | 6_1:+86440875 | Msa0896370:exon |
| TGTTGTATTCTACTTCATTT+TGG | 0.226600 | 6_1:+86440993 | Msa0896370:three_prime_UTR |
| ATAAGTGTATTTAATTATAA+AGG | 0.233533 | 6_1:-86441045 | None:intergenic |
| ATTTGTTTCAACCTGATAAT+TGG | 0.236175 | 6_1:+86440713 | Msa0896370:CDS |
| GACAATTTCAAACACCTTCT+TGG | 0.251487 | 6_1:+86439371 | Msa0896370:CDS |
| GTATAATTGGGGTGGGTATA+TGG | 0.261176 | 6_1:+86435901 | Msa0896370:CDS |
| ACAAACTTTCTCCAATTATC+AGG | 0.268602 | 6_1:-86440724 | None:intergenic |
| CAATCTTTAGGCACAAAATT+AGG | 0.272506 | 6_1:-86440948 | None:intergenic |
| AAATTGTATTATAACTTATA+GGG | 0.305858 | 6_1:+86440876 | Msa0896370:exon |
| GCTTTGAACATGACTCAAAT+TGG | 0.317891 | 6_1:+86435422 | Msa0896370:CDS |
| CCATACTGCTGCTGCGTTCA+TGG | 0.319923 | 6_1:-86435504 | None:intergenic |
| TGCACATGAACAGATATTAA+AGG | 0.334381 | 6_1:+86440615 | Msa0896370:CDS |
| CCATCAAACTTGAAAAGAAT+TGG | 0.339563 | 6_1:-86435400 | None:intergenic |
| ACATGGAAATTTCCAGGAAT+TGG | 0.341223 | 6_1:+86439908 | Msa0896370:CDS |
| TATTATAACTTATAGGGATT+AGG | 0.351094 | 6_1:+86440882 | Msa0896370:three_prime_UTR |
| GGATGTGTGGTGGGGATTGG+TGG | 0.355464 | 6_1:+86435859 | Msa0896370:CDS |
| GAAGGTAGCCATCGCGGTTA+CGG | 0.358269 | 6_1:-86440405 | None:intergenic |
| CCATCATACCCAGAGCAAAA+TGG | 0.368048 | 6_1:+86439884 | Msa0896370:CDS |
| CCCAGCCTCCACCTTCTTTG+CGG | 0.369282 | 6_1:-86440189 | None:intergenic |
| AAAGAGAAGGAGGGAGGTTG+AGG | 0.369368 | 6_1:-86435270 | None:intergenic |
| TACTAATTTATACAATCTTT+AGG | 0.370035 | 6_1:-86440960 | None:intergenic |
| GATGGATGTGTGGTGGGGAT+TGG | 0.370189 | 6_1:+86435856 | Msa0896370:CDS |
| TATCAGGTTGAAACAAATCT+TGG | 0.371891 | 6_1:-86440708 | None:intergenic |
| CATTGGAAAGCACCAATTCC+TGG | 0.375697 | 6_1:-86439920 | None:intergenic |
| GGGTGGGTATATGGAGCTTA+TGG | 0.377375 | 6_1:+86435910 | Msa0896370:CDS |
| TAATACCCTGCTGTTAGTTC+CGG | 0.378768 | 6_1:-86440376 | None:intergenic |
| TAAGTGTATTTAATTATAAA+GGG | 0.379172 | 6_1:-86441044 | None:intergenic |
| GCCGGTATTCATTGGCACTA+TGG | 0.382512 | 6_1:+86440337 | Msa0896370:CDS |
| AATGGAACATGGAAATTTCC+AGG | 0.389794 | 6_1:+86439902 | Msa0896370:CDS |
| TGTCAGATCTGGTCTGATTC+CGG | 0.395304 | 6_1:-86435633 | None:intergenic |
| CAGTATTCCTTTGCCTAAAT+GGG | 0.396936 | 6_1:+86439193 | Msa0896370:intron |
| AAAGAATGAACGTTGAGATA+TGG | 0.400495 | 6_1:-86435126 | None:intergenic |
| TGATTTCATGCGTGCTTTCA+GGG | 0.402789 | 6_1:+86439349 | Msa0896370:CDS |
| AAGGTAGCCATCGCGGTTAC+GGG | 0.403952 | 6_1:-86440404 | None:intergenic |
| TCCGCAAAGAAGGTGGAGGC+TGG | 0.418382 | 6_1:+86440188 | Msa0896370:CDS |
| GAAACATGGGCTTAAAGTTC+AGG | 0.423360 | 6_1:+86435943 | Msa0896370:CDS |
| ATCTCTTCTACAGCCCATTT+AGG | 0.424994 | 6_1:-86439206 | None:intergenic |
| GGTGATGATGGATGTGTGGT+GGG | 0.430756 | 6_1:+86435850 | Msa0896370:CDS |
| TGCTTTCCAATGCTATGATA+AGG | 0.433740 | 6_1:+86439931 | Msa0896370:CDS |
| AAATCAGAATAACATTGAAC+TGG | 0.433909 | 6_1:-86439332 | None:intergenic |
| TGAAAGTTGCCGGTATTCAT+TGG | 0.435013 | 6_1:+86440329 | Msa0896370:CDS |
| TTGAAGAGTGCTGGTGTGGA+AGG | 0.435752 | 6_1:+86435827 | Msa0896370:CDS |
| CTCGCCAACATTTGAGCGAT+TGG | 0.436580 | 6_1:-86440427 | None:intergenic |
| TGCTGCAAATAAGTCAGAAT+GGG | 0.436619 | 6_1:+86440105 | Msa0896370:CDS |
| TTGGTGGAGAGGGAGAAGCC+AGG | 0.438530 | 6_1:+86435875 | Msa0896370:CDS |
| CCATGAACGCAGCAGCAGTA+TGG | 0.438556 | 6_1:+86435504 | Msa0896370:CDS |
| AAGATATCCGTGAAAGTTGC+CGG | 0.439379 | 6_1:+86440319 | Msa0896370:CDS |
| TAGATGAACCTGTGCTTTCT+GGG | 0.440379 | 6_1:-86440557 | None:intergenic |
| ATCTTGCATATACTGATCAA+TGG | 0.440751 | 6_1:+86439243 | Msa0896370:CDS |
| TTTGTGAAGAAGATGAAAGA+AGG | 0.444526 | 6_1:+86440751 | Msa0896370:CDS |
| GAAGCCAGGGGAGTATAATT+GGG | 0.446434 | 6_1:+86435889 | Msa0896370:CDS |
| ATGAATACCGGCAACTTTCA+CGG | 0.451034 | 6_1:-86440326 | None:intergenic |
| ACTTGATTCACGAGCTTCTC+CGG | 0.454036 | 6_1:-86440523 | None:intergenic |
| GGAGGCTGGGACAGCGAATA+CGG | 0.462609 | 6_1:+86440202 | Msa0896370:CDS |
| TCACAAGCCGATGTCAGATC+TGG | 0.465088 | 6_1:-86435644 | None:intergenic |
| TGGTGGAGAGGGAGAAGCCA+GGG | 0.467702 | 6_1:+86435876 | Msa0896370:CDS |
| TGTGGTGGGGATTGGTGGAG+AGG | 0.469171 | 6_1:+86435864 | Msa0896370:CDS |
| CAGCTGGTCCCATTCCAACT+TGG | 0.473994 | 6_1:-86439847 | None:intergenic |
| TCTTGCATATACTGATCAAT+GGG | 0.474079 | 6_1:+86439244 | Msa0896370:CDS |
| TGGTGTGGAAGGGGTGATGA+TGG | 0.474478 | 6_1:+86435838 | Msa0896370:CDS |
| GTATATGGAGCTTATGGAAA+TGG | 0.474821 | 6_1:+86435916 | Msa0896370:CDS |
| TGACAACGTAGATTCGTTGC+TGG | 0.475188 | 6_1:-86435533 | None:intergenic |
| GAAAGAGAAGAGTGGAGTCC+CGG | 0.475379 | 6_1:+86435721 | Msa0896370:CDS |
| AAGCACAGGTTCATCTAGCC+GGG | 0.475765 | 6_1:+86440563 | Msa0896370:CDS |
| CGATGGGGAATGGTGTGAAT+AGG | 0.476334 | 6_1:+86435774 | Msa0896370:CDS |
| TCAGGAAATCCAAGTTGGAA+TGG | 0.481275 | 6_1:+86439838 | Msa0896370:intron |
| GAAAAGTGCCAATAAATGTT+GGG | 0.487450 | 6_1:+86440774 | Msa0896370:CDS |
| CAGGAAATCCAAGTTGGAAT+GGG | 0.489983 | 6_1:+86439839 | Msa0896370:intron |
| GCGTGATCACGAGCAGCCTC+AGG | 0.490422 | 6_1:+86440486 | Msa0896370:CDS |
| ATGCTGCAAATAAGTCAGAA+TGG | 0.494454 | 6_1:+86440104 | Msa0896370:CDS |
| TGATCAGTATATGCAAGATC+AGG | 0.500092 | 6_1:-86439239 | None:intergenic |
| TATATACCTTATCATAGCAT+TGG | 0.501002 | 6_1:-86439937 | None:intergenic |
| ACAAATCTTGGTTCATCCTA+AGG | 0.501427 | 6_1:-86440696 | None:intergenic |
| ATGGAAATGGCGAAGAAACA+TGG | 0.502805 | 6_1:+86435929 | Msa0896370:CDS |
| TGGTACAAGGTCTCATGCTC+CGG | 0.503262 | 6_1:+86440357 | Msa0896370:CDS |
| TGATACTTTGCCTGTACTCA+AGG | 0.503517 | 6_1:+86439301 | Msa0896370:CDS |
| CGATCAGACGTTGTAGAAAA+CGG | 0.504141 | 6_1:+86435563 | Msa0896370:CDS |
| ATGCAGGTGAGTACAACAAC+TGG | 0.506508 | 6_1:+86440146 | Msa0896370:CDS |
| ATGTTGGGAGCAAGTGGAGA+GGG | 0.507668 | 6_1:+86440789 | Msa0896370:CDS |
| TGTGTGCATTCACATACCTT+AGG | 0.510560 | 6_1:+86440680 | Msa0896370:CDS |
| GGAAAAGTGCCAATAAATGT+TGG | 0.513383 | 6_1:+86440773 | Msa0896370:CDS |
| TAGGCACAAAATTAGGCTGA+TGG | 0.514983 | 6_1:-86440941 | None:intergenic |
| GCGTTCATGGAAGCCGTTGT+TGG | 0.515521 | 6_1:-86435491 | None:intergenic |
| GGCGGTGAATGTGGCGATGG+CGG | 0.516044 | 6_1:+86435802 | Msa0896370:CDS |
| AATGATGGACGGTAGAGTAC+AGG | 0.518603 | 6_1:-86435175 | None:intergenic |
| CCGCAAAGAAGGTGGAGGCT+GGG | 0.520804 | 6_1:+86440189 | Msa0896370:CDS |
| TTGTGAAGAAGATGAAAGAA+GGG | 0.520951 | 6_1:+86440752 | Msa0896370:CDS |
| AAAGCACAGGTTCATCTAGC+CGG | 0.521686 | 6_1:+86440562 | Msa0896370:CDS |
| TCACCGGTACTAAGCGGTAC+CGG | 0.524025 | 6_1:+86435614 | Msa0896370:CDS |
| CAAGTTGGAATGGGACCAGC+TGG | 0.527927 | 6_1:+86439848 | Msa0896370:CDS |
| GTGGTGGGGATTGGTGGAGA+GGG | 0.528829 | 6_1:+86435865 | Msa0896370:CDS |
| ACCATAGTGCCAATGAATAC+CGG | 0.530958 | 6_1:-86440338 | None:intergenic |
| ATGGCGGCGTTGAAGAGTGC+TGG | 0.533527 | 6_1:+86435818 | Msa0896370:CDS |
| GTGGAGAATGAGTTTGTAGC+TGG | 0.535437 | 6_1:+86435686 | Msa0896370:CDS |
| CATGCTCCGGAACTAACAGC+AGG | 0.536163 | 6_1:+86440370 | Msa0896370:CDS |
| GCAACAGCCTCTTGCACAAG+AGG | 0.536388 | 6_1:-86440841 | None:intergenic |
| ACAATTCAGGAAATCCAAGT+TGG | 0.536611 | 6_1:+86439833 | Msa0896370:intron |
| TGATCTTGTTGCCATACATA+AGG | 0.536881 | 6_1:+86441121 | Msa0896370:three_prime_UTR |
| CCTTCCAATCGCTCAAATGT+TGG | 0.536922 | 6_1:+86440423 | Msa0896370:CDS |
| AAGTCAGAATGGGGAAGCAC+GGG | 0.538635 | 6_1:+86440115 | Msa0896370:CDS |
| GATGTTGATTCAATTTGTAT+CGG | 0.541747 | 6_1:-86435461 | None:intergenic |
| GGACTTCTGCCCTTGAGTAC+AGG | 0.542076 | 6_1:-86439311 | None:intergenic |
| AGTGTTGCGTGGAGGAATGA+TGG | 0.542391 | 6_1:-86435190 | None:intergenic |
| GGGTGATGATGGATGTGTGG+TGG | 0.542401 | 6_1:+86435849 | Msa0896370:CDS |
| TAGAAATGAAAAGAAAGAGA+TGG | 0.546372 | 6_1:-86435308 | None:intergenic |
| CCACCCCAATTATACTCCCC+TGG | 0.547863 | 6_1:-86435893 | None:intergenic |
| TAAGTCAGAATGGGGAAGCA+CGG | 0.547960 | 6_1:+86440114 | Msa0896370:CDS |
| AGCACGGGACCTACTGATGC+AGG | 0.550981 | 6_1:+86440130 | Msa0896370:CDS |
| TCTACAGCCCATTTAGGCAA+AGG | 0.553791 | 6_1:-86439200 | None:intergenic |
| TACACAGCCTCTTGTGCAAG+AGG | 0.555997 | 6_1:+86440834 | Msa0896370:CDS |
| TAAATGGGCTGTAGAAGAGA+TGG | 0.559568 | 6_1:+86439208 | Msa0896370:CDS |
| CCGTTAGATAGTGTGACGAT+GGG | 0.559999 | 6_1:+86435758 | Msa0896370:CDS |
| GTGATGATGGATGTGTGGTG+GGG | 0.562496 | 6_1:+86435851 | Msa0896370:CDS |
| TAGGAAGAAGGCGGTGAATG+TGG | 0.564642 | 6_1:+86435793 | Msa0896370:CDS |
| AAGGGGTGATGATGGATGTG+TGG | 0.565032 | 6_1:+86435846 | Msa0896370:CDS |
| AACGGCATCATCACATACAC+CGG | 0.568607 | 6_1:-86435740 | None:intergenic |
| CCAACATTTGAGCGATTGGA+AGG | 0.570940 | 6_1:-86440423 | None:intergenic |
| TACAACACCCGTAACCGCGA+TGG | 0.571460 | 6_1:+86440397 | Msa0896370:CDS |
| AAGACGAAGAAAGAGAAGAG+TGG | 0.571594 | 6_1:+86435713 | Msa0896370:CDS |
| TGAAGAGTGCTGGTGTGGAA+GGG | 0.571682 | 6_1:+86435828 | Msa0896370:CDS |
| GATAGTGTGACGATGGGGAA+TGG | 0.572327 | 6_1:+86435764 | Msa0896370:CDS |
| AGAATGAGTTTGTAGCTGGA+GGG | 0.573667 | 6_1:+86435690 | Msa0896370:CDS |
| GAGTACAGGAACGGTGGAGA+TGG | 0.574381 | 6_1:-86435161 | None:intergenic |
| TCTTGTTGCCATACATAAGG+TGG | 0.575393 | 6_1:+86441124 | Msa0896370:three_prime_UTR |
| AAATCAATCTTTGACAACAC+TGG | 0.582272 | 6_1:+86440292 | Msa0896370:CDS |
| TTGTACTCACCTGCATCAGT+AGG | 0.583919 | 6_1:-86440139 | None:intergenic |
| GGTGGAGAGGGAGAAGCCAG+GGG | 0.584324 | 6_1:+86435877 | Msa0896370:CDS |
| GAATGGTGTGAATAGGAAGA+AGG | 0.585955 | 6_1:+86435781 | Msa0896370:CDS |
| ATTCCGGTACCGCTTAGTAC+CGG | 0.586756 | 6_1:-86435617 | None:intergenic |
| GAAGGCGGTGAATGTGGCGA+TGG | 0.587976 | 6_1:+86435799 | Msa0896370:CDS |
| CAATAAATGTTGGGAGCAAG+TGG | 0.588636 | 6_1:+86440783 | Msa0896370:CDS |
| AACGGTGGAGATGGTGTGAA+TGG | 0.588779 | 6_1:-86435152 | None:intergenic |
| GCTCAAATGTTGGCGAGACA+CGG | 0.591977 | 6_1:+86440433 | Msa0896370:CDS |
| TTCATTGGCACTATGGTACA+AGG | 0.591996 | 6_1:+86440344 | Msa0896370:CDS |
| TTTAGCTACCCAGAAAGCAC+AGG | 0.593582 | 6_1:+86440549 | Msa0896370:CDS |
| GAAGAGTGCTGGTGTGGAAG+GGG | 0.593594 | 6_1:+86435829 | Msa0896370:CDS |
| GTTGAATGTCGAGGGTAACT+CGG | 0.597129 | 6_1:+86440645 | Msa0896370:CDS |
| GGGTAACGTAGCTCACCAGC+TGG | 0.600107 | 6_1:-86439863 | None:intergenic |
| GGAGAAAATATTTACCACAA+TGG | 0.603015 | 6_1:-86439399 | None:intergenic |
| TCAGGATGCACAATGTGCAC+CGG | 0.605743 | 6_1:+86440504 | Msa0896370:CDS |
| CCACAATGGTGTCACCAAGA+AGG | 0.607264 | 6_1:-86439385 | None:intergenic |
| CCAGGGGAGTATAATTGGGG+TGG | 0.607897 | 6_1:+86435893 | Msa0896370:CDS |
| GGCGTCCGCGTTGAATGTCG+AGG | 0.608236 | 6_1:+86440636 | Msa0896370:CDS |
| GATGAGTCCGTGTAGATCAC+CGG | 0.613929 | 6_1:+86435598 | Msa0896370:CDS |
| CCTTCTTGGTGACACCATTG+TGG | 0.615352 | 6_1:+86439385 | Msa0896370:CDS |
| TGGAAATGGCGAAGAAACAT+GGG | 0.616259 | 6_1:+86435930 | Msa0896370:CDS |
| GGTGATCTACACGGACTCAT+CGG | 0.616445 | 6_1:-86435596 | None:intergenic |
| ATGTGAGAATCCTCTCACCA+TGG | 0.618747 | 6_1:-86440264 | None:intergenic |
| GAGAATGAGTTTGTAGCTGG+AGG | 0.618981 | 6_1:+86435689 | Msa0896370:CDS |
| GGCGTTGAAGAGTGCTGGTG+TGG | 0.620252 | 6_1:+86435823 | Msa0896370:CDS |
| ATTAGGAAACAGTCACAAGT+AGG | 0.621489 | 6_1:+86440899 | Msa0896370:three_prime_UTR |
| ACTCAAATTGGTAGTCTCGT+CGG | 0.622871 | 6_1:+86435434 | Msa0896370:CDS |
| AGCATTAACGATGGATGTGG+TGG | 0.626090 | 6_1:+86435667 | Msa0896370:CDS |
| CCCATCGTCACACTATCTAA+CGG | 0.626379 | 6_1:-86435758 | None:intergenic |
| TGAAGCATTAACGATGGATG+TGG | 0.628781 | 6_1:+86435664 | Msa0896370:CDS |
| CATCAATGTGGTGGTAACGT+TGG | 0.629470 | 6_1:+86435980 | Msa0896370:CDS |
| ACCCAGAGCAAAATGGAACA+TGG | 0.629658 | 6_1:+86439891 | Msa0896370:CDS |
| CTTAGTACCGGTGATCTACA+CGG | 0.630019 | 6_1:-86435605 | None:intergenic |
| GCCGTTAGATAGTGTGACGA+TGG | 0.634294 | 6_1:+86435757 | Msa0896370:CDS |
| CAGGGGAGTATAATTGGGGT+GGG | 0.635034 | 6_1:+86435894 | Msa0896370:CDS |
| GATACTTTGCCTGTACTCAA+GGG | 0.637847 | 6_1:+86439302 | Msa0896370:CDS |
| TGGTGTGAATAGGAAGAAGG+CGG | 0.638590 | 6_1:+86435784 | Msa0896370:CDS |
| CCGGGGAAAATGCTTTGCCA+CGG | 0.638800 | 6_1:+86440581 | Msa0896370:CDS |
| AATGTTGGGAGCAAGTGGAG+AGG | 0.645936 | 6_1:+86440788 | Msa0896370:CDS |
| GGTGCACATTGTGCATCCTG+AGG | 0.646679 | 6_1:-86440502 | None:intergenic |
| TACACGTGTCATATAACCAA+CGG | 0.646742 | 6_1:+86435215 | Msa0896370:five_prime_UTR |
| GGCTTGTGAAGCATTAACGA+TGG | 0.654372 | 6_1:+86435658 | Msa0896370:CDS |
| TGCTGTTGAACCATGGTGAG+AGG | 0.654830 | 6_1:+86440254 | Msa0896370:CDS |
| CGTTAGATAGTGTGACGATG+GGG | 0.657639 | 6_1:+86435759 | Msa0896370:CDS |
| ACATGGGCTTAAAGTTCAGG+CGG | 0.658601 | 6_1:+86435946 | Msa0896370:CDS |
| GGAGAAGCTCGTGAATCAAG+TGG | 0.659808 | 6_1:+86440525 | Msa0896370:CDS |
| TCTCAAATGCTGTTGAACCA+TGG | 0.663371 | 6_1:+86440247 | Msa0896370:CDS |
| AAGCCAGGGGAGTATAATTG+GGG | 0.665681 | 6_1:+86435890 | Msa0896370:CDS |
| ACGGCATCATCACATACACC+GGG | 0.665787 | 6_1:-86435739 | None:intergenic |
| GCGTCCGCGTTGAATGTCGA+GGG | 0.669013 | 6_1:+86440637 | Msa0896370:CDS |
| AACATCAACAGAGCCAACAA+CGG | 0.669647 | 6_1:+86435478 | Msa0896370:CDS |
| AGGAAACAGTCACAAGTAGG+TGG | 0.669727 | 6_1:+86440902 | Msa0896370:three_prime_UTR |
| AGCACAGGTTCATCTAGCCG+GGG | 0.672042 | 6_1:+86440564 | Msa0896370:CDS |
| ATGCTCCGGAACTAACAGCA+GGG | 0.677291 | 6_1:+86440371 | Msa0896370:CDS |
| TGTAGATCACCGGTACTAAG+CGG | 0.677947 | 6_1:+86435608 | Msa0896370:CDS |
| GCTGCAAATAAGTCAGAATG+GGG | 0.678531 | 6_1:+86440106 | Msa0896370:CDS |
| CGATTGGAAGGTAGCCATCG+CGG | 0.680061 | 6_1:-86440411 | None:intergenic |
| CGTGTAAGAGTGTTGCGTGG+AGG | 0.680457 | 6_1:-86435198 | None:intergenic |
| AATCAGACCAGATCTGACAT+CGG | 0.690093 | 6_1:+86435637 | Msa0896370:CDS |
| GCATTTGAGAGTACCATGTG+AGG | 0.694448 | 6_1:-86440234 | None:intergenic |
| ACGGTAGAGTACAGGAACGG+TGG | 0.717492 | 6_1:-86435167 | None:intergenic |
| TTGCGTGGAGGAATGATGGA+CGG | 0.717810 | 6_1:-86435186 | None:intergenic |
| GATCTACACGGACTCATCGG+CGG | 0.718336 | 6_1:-86435593 | None:intergenic |
| CTTGCATATACTGATCAATG+GGG | 0.723447 | 6_1:+86439245 | Msa0896370:CDS |
| TGTGCATGTTCATCATACCG+TGG | 0.724780 | 6_1:-86440598 | None:intergenic |
| TGGACGGTAGAGTACAGGAA+CGG | 0.735763 | 6_1:-86435170 | None:intergenic |
| ACACGTGTAAGAGTGTTGCG+TGG | 0.748782 | 6_1:-86435201 | None:intergenic |
| GTTACCCTCGACATTCAACG+CGG | 0.791435 | 6_1:-86440641 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTATTATTTTTAATTTTTA+AGG | + | chr6_1:86436363-86436382 | Msa0896370:intron | 0.0% |
| !!! | TTTATTTTGATAAACAAAAT+GGG | - | chr6_1:86437149-86437168 | None:intergenic | 10.0% |
| !!! | TTTTATTTTGATAAACAAAA+TGG | - | chr6_1:86437150-86437169 | None:intergenic | 10.0% |
| !! | ATAATTTATAAAGAAAGAAT+AGG | - | chr6_1:86438079-86438098 | None:intergenic | 10.0% |
| !! | TATTCTTTCTTTATAAATTA+TGG | + | chr6_1:86438078-86438097 | Msa0896370:intron | 10.0% |
| !! | AAAAATCAATTAAAAAAAGA+TGG | + | chr6_1:86438971-86438990 | Msa0896370:intron | 10.0% |
| !! | AAAATTGTATTATAACTTAT+AGG | + | chr6_1:86440875-86440894 | Msa0896370:exon | 10.0% |
| !! | AAATTGTATTATAACTTATA+GGG | + | chr6_1:86440876-86440895 | Msa0896370:exon | 10.0% |
| !! | TAAGTGTATTTAATTATAAA+GGG | - | chr6_1:86441047-86441066 | None:intergenic | 10.0% |
| !! | ATAAGTGTATTTAATTATAA+AGG | - | chr6_1:86441048-86441067 | None:intergenic | 10.0% |
| !! | TATAATTAAATACACTTATA+TGG | + | chr6_1:86441049-86441068 | Msa0896370:three_prime_UTR | 10.0% |
| !! | ATTAGTAGTTTAATTGATAA+TGG | + | chr6_1:86436129-86436148 | Msa0896370:intron | 15.0% |
| !!! | TTTGTATAAAATTTGTTTGT+AGG | + | chr6_1:86436316-86436335 | Msa0896370:intron | 15.0% |
| !! | AATGCTATTAAAATTAAGTA+GGG | - | chr6_1:86436927-86436946 | None:intergenic | 15.0% |
| !! | AAATGCTATTAAAATTAAGT+AGG | - | chr6_1:86436926-86436945 | None:intergenic | 15.0% |
| !! | TTCAAAAATTTAAGAGTTTA+AGG | - | chr6_1:86436835-86436854 | None:intergenic | 15.0% |
| !! | AGATAAAAAGTAATAAAATC+TGG | + | chr6_1:86436735-86436754 | Msa0896370:intron | 15.0% |
| !!! | AATTTTGCAATAATTTTTTG+CGG | + | chr6_1:86436770-86436789 | Msa0896370:intron | 15.0% |
| !! | AATGCTATTAAAATTAAGTA+TGG | + | chr6_1:86436927-86436946 | Msa0896370:intron | 15.0% |
| !!! | TTTAAGTCAAATATTTTCAA+GGG | - | chr6_1:86437001-86437020 | None:intergenic | 15.0% |
| !!! | ATTTAAGTCAAATATTTTCA+AGG | - | chr6_1:86437002-86437021 | None:intergenic | 15.0% |
| !!! | TTTTTGTATTCAATTTTGAA+TGG | - | chr6_1:86437354-86437373 | None:intergenic | 15.0% |
| !!! | CATTTTGAAACAAATTTTTT+TGG | - | chr6_1:86437589-86437608 | None:intergenic | 15.0% |
| !! | AAATTATCCTTATTAACTAT+TGG | - | chr6_1:86437716-86437735 | None:intergenic | 15.0% |
| !! | AATAGTTAATAAGGATAATT+TGG | + | chr6_1:86437715-86437734 | Msa0896370:intron | 15.0% |
| !! | AATGATTAAAAGAAAGATAA+TGG | - | chr6_1:86437749-86437768 | None:intergenic | 15.0% |
| !! | CAAATTGATATTGATATATT+GGG | - | chr6_1:86438887-86438906 | None:intergenic | 15.0% |
| !! | ACAAATTGATATTGATATAT+TGG | - | chr6_1:86438888-86438907 | None:intergenic | 15.0% |
| !!! | TTTAAACTCTTTTCATTTAT+GGG | + | chr6_1:86439146-86439165 | Msa0896370:intron | 15.0% |
| !!! | ACTTAATGTTTTTTATATCA+TGG | + | chr6_1:86439758-86439777 | Msa0896370:intron | 15.0% |
| !! | TACTAATTTATACAATCTTT+AGG | - | chr6_1:86440963-86440982 | None:intergenic | 15.0% |
| !! | TAAACAAATTTGAATTGAGT+AGG | + | chr6_1:86436864-86436883 | Msa0896370:intron | 20.0% |
| !! | AAACAAATTTGAATTGAGTA+GGG | + | chr6_1:86436865-86436884 | Msa0896370:intron | 20.0% |
| !!! | AATCACACAAATTTGATTTA+AGG | + | chr6_1:86437072-86437091 | Msa0896370:intron | 20.0% |
| !! | TAAATTGTGATTATGATTTG+TGG | + | chr6_1:86437103-86437122 | Msa0896370:intron | 20.0% |
| !!! | TCTTAATTAGGATTTTGTAA+AGG | - | chr6_1:86437178-86437197 | None:intergenic | 20.0% |
| !! | TTAGTTGTGAATTCTTAATT+AGG | - | chr6_1:86437190-86437209 | None:intergenic | 20.0% |
| !!! | AATTTGAGTTTGAGTATTTT+TGG | + | chr6_1:86437238-86437257 | Msa0896370:intron | 20.0% |
| !! | AAAATTGATCGTATCATATT+TGG | - | chr6_1:86437308-86437327 | None:intergenic | 20.0% |
| !!! | ACACTAGTTTCTTTTATATT+TGG | + | chr6_1:86437413-86437432 | Msa0896370:intron | 20.0% |
| !!! | AAAAAATGTTTTAGACACAT+AGG | + | chr6_1:86437483-86437502 | Msa0896370:intron | 20.0% |
| !! | AGAAAAAGTTATTATTGCAT+TGG | - | chr6_1:86437629-86437648 | None:intergenic | 20.0% |
| !! | TAGTTGTAAAAGTAATACTT+TGG | - | chr6_1:86437692-86437711 | None:intergenic | 20.0% |
| !! | TATAAAGAAAGAATAGGTAT+TGG | - | chr6_1:86438073-86438092 | None:intergenic | 20.0% |
| !! | TTTGAATATCCTTTAATTGA+CGG | - | chr6_1:86438117-86438136 | None:intergenic | 20.0% |
| !!! | GCATACAAATTTTTTTTTGT+TGG | - | chr6_1:86438238-86438257 | None:intergenic | 20.0% |
| !!! | AAAAATGTTTTTAATGTGTG+TGG | + | chr6_1:86438306-86438325 | Msa0896370:intron | 20.0% |
| !! | TTCTTCAAAAGAAGAAAAAA+AGG | + | chr6_1:86438694-86438713 | Msa0896370:intron | 20.0% |
| !!! | ATGAGTCTTATTTTTATTTG+TGG | + | chr6_1:86438732-86438751 | Msa0896370:intron | 20.0% |
| !! | TCTTCTGTCTAAATTTATTT+AGG | + | chr6_1:86439066-86439085 | Msa0896370:intron | 20.0% |
| !! | CTTCTGTCTAAATTTATTTA+GGG | + | chr6_1:86439067-86439086 | Msa0896370:intron | 20.0% |
| !!! | GAAAAGTTGGTATATTTATA+GGG | - | chr6_1:86439110-86439129 | None:intergenic | 20.0% |
| !!! | GTTTAAACTCTTTTCATTTA+TGG | + | chr6_1:86439145-86439164 | Msa0896370:intron | 20.0% |
| !!! | AATTTTGAATATTTGTCACT+TGG | + | chr6_1:86439275-86439294 | Msa0896370:CDS | 20.0% |
| !! | ATAGTAAAAACAACGTATAA+TGG | - | chr6_1:86439436-86439455 | None:intergenic | 20.0% |
| !!! | TTTTCTATTTCTAAATTTGC+AGG | - | chr6_1:86439466-86439485 | None:intergenic | 20.0% |
| !! | TGAAATCTATGAAATCAATT+TGG | + | chr6_1:86439529-86439548 | Msa0896370:intron | 20.0% |
| !!! | ATTGATTCTAACTTAAAGTT+AGG | - | chr6_1:86439722-86439741 | None:intergenic | 20.0% |
| !! | TATTATAACTTATAGGGATT+AGG | + | chr6_1:86440882-86440901 | Msa0896370:three_prime_UTR | 20.0% |
| !!! | TTTTTCATAATATCATCTCT+AGG | + | chr6_1:86441084-86441103 | Msa0896370:three_prime_UTR | 20.0% |
| !!! | AATATTTTTGATTTGACCGT+TGG | - | chr6_1:86435234-86435253 | None:intergenic | 25.0% |
| !! | AGATTTTATAAAGAGAAGGA+GGG | - | chr6_1:86435282-86435301 | None:intergenic | 25.0% |
| !! | AACGAGATTTTATAAAGAGA+AGG | - | chr6_1:86435286-86435305 | None:intergenic | 25.0% |
| ! | TAGAAATGAAAAGAAAGAGA+TGG | - | chr6_1:86435311-86435330 | None:intergenic | 25.0% |
| !!! | GATGTTGATTCAATTTGTAT+CGG | - | chr6_1:86435464-86435483 | None:intergenic | 25.0% |
| ! | TTATAGTCACAAAACGTATA+AGG | - | chr6_1:86436259-86436278 | None:intergenic | 25.0% |
| ! | ACCATAGTAACATTGAAAAT+AGG | + | chr6_1:86436438-86436457 | Msa0896370:intron | 25.0% |
| ! | CCATAGTAACATTGAAAATA+GGG | + | chr6_1:86436439-86436458 | Msa0896370:intron | 25.0% |
| !!! | TACAATGTCGCTATTTTATA+GGG | - | chr6_1:86436482-86436501 | None:intergenic | 25.0% |
| !!! | TTACAATGTCGCTATTTTAT+AGG | - | chr6_1:86436483-86436502 | None:intergenic | 25.0% |
| !!! | AATCAAACTTTGTTTTAGCA+GGG | - | chr6_1:86436575-86436594 | None:intergenic | 25.0% |
| !!! | TAATCAAACTTTGTTTTAGC+AGG | - | chr6_1:86436576-86436595 | None:intergenic | 25.0% |
| ! | AGTGCAGAAAAACAAAATTA+GGG | + | chr6_1:86436898-86436917 | Msa0896370:intron | 25.0% |
| !! | CCAAATTGGTAGTATTAAAT+TGG | - | chr6_1:86437511-86437530 | None:intergenic | 25.0% |
| ! | CCAATTTAATACTACCAATT+TGG | + | chr6_1:86437508-86437527 | Msa0896370:intron | 25.0% |
| ! | CAACTAACCAATAGTTAATA+AGG | + | chr6_1:86437706-86437725 | Msa0896370:intron | 25.0% |
| !!! | AATTTTTTTTTGTTGGTTGC+CGG | - | chr6_1:86438231-86438250 | None:intergenic | 25.0% |
| ! | CAGTTTCATAAAGTTACTAT+TGG | + | chr6_1:86438631-86438650 | Msa0896370:intron | 25.0% |
| !! | TTTAGGGTTAAATATGTTTG+TGG | + | chr6_1:86439083-86439102 | Msa0896370:intron | 25.0% |
| !!! | CGAAAAGTTGGTATATTTAT+AGG | - | chr6_1:86439111-86439130 | None:intergenic | 25.0% |
| ! | AAATCAGAATAACATTGAAC+TGG | - | chr6_1:86439335-86439354 | None:intergenic | 25.0% |
| ! | CGTATAATGGTAAAATGAAT+TGG | - | chr6_1:86439423-86439442 | None:intergenic | 25.0% |
| ! | GAAAACAAAGTAAAACAAGA+TGG | + | chr6_1:86439481-86439500 | Msa0896370:intron | 25.0% |
| !! | ATTTGAAATGACGATGAATT+TGG | + | chr6_1:86439572-86439591 | Msa0896370:intron | 25.0% |
| ! | TTAGAATCACATATCACAAA+TGG | - | chr6_1:86439650-86439669 | None:intergenic | 25.0% |
| ! | TATATACCTTATCATAGCAT+TGG | - | chr6_1:86439940-86439959 | None:intergenic | 25.0% |
| ! | TACAAAAGAAAGAGTTCAAA+AGG | - | chr6_1:86439991-86440010 | None:intergenic | 25.0% |
| ! | ATTTGTTTCAACCTGATAAT+TGG | + | chr6_1:86440713-86440732 | Msa0896370:CDS | 25.0% |
| !! | TGTTGTATTCTACTTCATTT+TGG | + | chr6_1:86440993-86441012 | Msa0896370:three_prime_UTR | 25.0% |
| ! | ATAAAAATCCACCTTATGTA+TGG | - | chr6_1:86441135-86441154 | None:intergenic | 25.0% |
| !!! | AAGGTGGATTTTTATTGATA+AGG | + | chr6_1:86441140-86441159 | Msa0896370:three_prime_UTR | 25.0% |
| AAAGAATGAACGTTGAGATA+TGG | - | chr6_1:86435129-86435148 | None:intergenic | 30.0% | |
| ! | GAGATTTTATAAAGAGAAGG+AGG | - | chr6_1:86435283-86435302 | None:intergenic | 30.0% |
| CCATCAAACTTGAAAAGAAT+TGG | - | chr6_1:86435403-86435422 | None:intergenic | 30.0% | |
| !!! | CCAATTCTTTTCAAGTTTGA+TGG | + | chr6_1:86435400-86435419 | Msa0896370:exon | 30.0% |
| ! | GTTATGTCTTTTCATCAATG+TGG | + | chr6_1:86435968-86435987 | Msa0896370:CDS | 30.0% |
| ATATTTGCTTACTATGCTAG+TGG | + | chr6_1:86436089-86436108 | Msa0896370:intron | 30.0% | |
| !! | AATTGATAATGGCTAAGATG+AGG | + | chr6_1:86436140-86436159 | Msa0896370:intron | 30.0% |
| ! | CCCTATTTTCAATGTTACTA+TGG | - | chr6_1:86436442-86436461 | None:intergenic | 30.0% |
| CAAGATTAGAACACTATGAA+AGG | + | chr6_1:86436638-86436657 | Msa0896370:intron | 30.0% | |
| CAGTGCAGAAAAACAAAATT+AGG | + | chr6_1:86436897-86436916 | Msa0896370:intron | 30.0% | |
| ! | AAGTATGGACTAAACTTACA+AGG | + | chr6_1:86436942-86436961 | Msa0896370:intron | 30.0% |
| !! | TTACAAGGTCGCTATTTTAT+AGG | + | chr6_1:86436957-86436976 | Msa0896370:intron | 30.0% |
| !! | TACAAGGTCGCTATTTTATA+GGG | + | chr6_1:86436958-86436977 | Msa0896370:intron | 30.0% |
| !! | TGTAGAAAGAGAGTGTTATA+AGG | + | chr6_1:86437380-86437399 | Msa0896370:intron | 30.0% |
| !! | AAGCGACACTCATTTTTAAA+CGG | - | chr6_1:86437563-86437582 | None:intergenic | 30.0% |
| !!! | TTCAAAATGAGTGTCGTTTT+AGG | - | chr6_1:86437797-86437816 | None:intergenic | 30.0% |
| !! | AAACGACACTCATTTTGAAA+CGG | + | chr6_1:86437798-86437817 | Msa0896370:intron | 30.0% |
| TAGCAAAAGTTGTCACAAAA+TGG | - | chr6_1:86437987-86438006 | None:intergenic | 30.0% | |
| GACAATGCATAATATATGCA+AGG | + | chr6_1:86438190-86438209 | Msa0896370:intron | 30.0% | |
| TGCATAATATATGCAAGGTT+CGG | + | chr6_1:86438195-86438214 | Msa0896370:intron | 30.0% | |
| !!! | ATTTTTTTTTGTTGGTTGCC+GGG | - | chr6_1:86438230-86438249 | None:intergenic | 30.0% |
| TCTAATGTGATGTGAGTTTA+AGG | + | chr6_1:86438281-86438300 | Msa0896370:intron | 30.0% | |
| TTGCATATTGCTTCTTAACT+TGG | + | chr6_1:86438393-86438412 | Msa0896370:intron | 30.0% | |
| !! | TGGTTTTGCTTTTCTTTTGA+AGG | + | chr6_1:86438413-86438432 | Msa0896370:intron | 30.0% |
| !! | GGTTTTGCTTTTCTTTTGAA+GGG | + | chr6_1:86438414-86438433 | Msa0896370:intron | 30.0% |
| CTTCACTAAGAAAAAGTAGT+TGG | + | chr6_1:86438443-86438462 | Msa0896370:intron | 30.0% | |
| AAGAAAAAGTAGTTGGAACT+TGG | + | chr6_1:86438450-86438469 | Msa0896370:intron | 30.0% | |
| TGGTATGTAGTGAAAAAGTT+TGG | + | chr6_1:86438752-86438771 | Msa0896370:intron | 30.0% | |
| ! | GAAAAAGTTTGGTTTCATGA+TGG | + | chr6_1:86438763-86438782 | Msa0896370:intron | 30.0% |
| !! | TGATTCATGTGAATTGGTTT+TGG | - | chr6_1:86438817-86438836 | None:intergenic | 30.0% |
| TTGATGTGATTCATGTGAAT+TGG | - | chr6_1:86438823-86438842 | None:intergenic | 30.0% | |
| AAGAGACTAAAACGAAAAGT+TGG | - | chr6_1:86439123-86439142 | None:intergenic | 30.0% | |
| ATCTTGCATATACTGATCAA+TGG | + | chr6_1:86439243-86439262 | Msa0896370:CDS | 30.0% | |
| TCTTGCATATACTGATCAAT+GGG | + | chr6_1:86439244-86439263 | Msa0896370:CDS | 30.0% | |
| GGAGAAAATATTTACCACAA+TGG | - | chr6_1:86439402-86439421 | None:intergenic | 30.0% | |
| ! | CACAAATGGCAAAGTAATTT+TGG | - | chr6_1:86439636-86439655 | None:intergenic | 30.0% |
| AAATCAATCTTTGACAACAC+TGG | + | chr6_1:86440292-86440311 | Msa0896370:CDS | 30.0% | |
| TGCACATGAACAGATATTAA+AGG | + | chr6_1:86440615-86440634 | Msa0896370:CDS | 30.0% | |
| !! | TATCAGGTTGAAACAAATCT+TGG | - | chr6_1:86440711-86440730 | None:intergenic | 30.0% |
| ACAAACTTTCTCCAATTATC+AGG | - | chr6_1:86440727-86440746 | None:intergenic | 30.0% | |
| TTTGTGAAGAAGATGAAAGA+AGG | + | chr6_1:86440751-86440770 | Msa0896370:CDS | 30.0% | |
| TTGTGAAGAAGATGAAAGAA+GGG | + | chr6_1:86440752-86440771 | Msa0896370:CDS | 30.0% | |
| !! | GAAAAGTGCCAATAAATGTT+GGG | + | chr6_1:86440774-86440793 | Msa0896370:CDS | 30.0% |
| CAATCTTTAGGCACAAAATT+AGG | - | chr6_1:86440951-86440970 | None:intergenic | 30.0% | |
| ! | GGGTAACAAATAGAAGTTTT+AGG | - | chr6_1:86441027-86441046 | None:intergenic | 30.0% |
| TACACGTGTCATATAACCAA+CGG | + | chr6_1:86435215-86435234 | Msa0896370:five_prime_UTR | 35.0% | |
| ! | TTTTATAAAGAGAAGGAGGG+AGG | - | chr6_1:86435279-86435298 | None:intergenic | 35.0% |
| !! | TTGTTTTACTTTGCTGAGCA+TGG | - | chr6_1:86435338-86435357 | None:intergenic | 35.0% |
| ! | GCTTTGAACATGACTCAAAT+TGG | + | chr6_1:86435422-86435441 | Msa0896370:CDS | 35.0% |
| GTATATGGAGCTTATGGAAA+TGG | + | chr6_1:86435916-86435935 | Msa0896370:CDS | 35.0% | |
| ! | ATGTCTTTTCATCAATGTGG+TGG | + | chr6_1:86435971-86435990 | Msa0896370:CDS | 35.0% |
| TAGTCACAAAACGTATAAGG+TGG | - | chr6_1:86436256-86436275 | None:intergenic | 35.0% | |
| TCATATTTGGCTAACTCTAG+AGG | - | chr6_1:86437295-86437314 | None:intergenic | 35.0% | |
| GAGTACAAACTAGTTGCATT+GGG | - | chr6_1:86437537-86437556 | None:intergenic | 35.0% | |
| !! | GACACTCATTTTTAAACGGA+GGG | - | chr6_1:86437559-86437578 | None:intergenic | 35.0% |
| ! | TGTGCAGAGTATTAATTGGA+GGG | - | chr6_1:86437663-86437682 | None:intergenic | 35.0% |
| ! | GTAGTGTGCAGAGTATTAAT+TGG | - | chr6_1:86437667-86437686 | None:intergenic | 35.0% |
| TTATACCAAAAACCTTTCCC+GGG | - | chr6_1:86437944-86437963 | None:intergenic | 35.0% | |
| CTTATACCAAAAACCTTTCC+CGG | - | chr6_1:86437945-86437964 | None:intergenic | 35.0% | |
| TCCTTTAATTGACGGCTTAT+GGG | - | chr6_1:86438109-86438128 | None:intergenic | 35.0% | |
| ATCCTTTAATTGACGGCTTA+TGG | - | chr6_1:86438110-86438129 | None:intergenic | 35.0% | |
| TGAGCTTAACTCAATTGGTA+TGG | + | chr6_1:86438168-86438187 | Msa0896370:intron | 35.0% | |
| GCATAATATATGCAAGGTTC+GGG | + | chr6_1:86438196-86438215 | Msa0896370:intron | 35.0% | |
| CATAATATATGCAAGGTTCG+GGG | + | chr6_1:86438197-86438216 | Msa0896370:intron | 35.0% | |
| !!! | TTTTTTTTTGTTGGTTGCCG+GGG | - | chr6_1:86438229-86438248 | None:intergenic | 35.0% |
| ! | AGAAGAAAAAAAGGCGTGTA+AGG | + | chr6_1:86438703-86438722 | Msa0896370:intron | 35.0% |
| ! | TGGTTTCATGATGGAAAAGT+AGG | + | chr6_1:86438772-86438791 | Msa0896370:intron | 35.0% |
| AGTAGCTATGTTGAGATTAG+TGG | + | chr6_1:86438860-86438879 | Msa0896370:intron | 35.0% | |
| CTGTCACACACAACAATAAT+TGG | - | chr6_1:86439176-86439195 | None:intergenic | 35.0% | |
| ACAGTATTCCTTTGCCTAAA+TGG | + | chr6_1:86439192-86439211 | Msa0896370:intron | 35.0% | |
| CAGTATTCCTTTGCCTAAAT+GGG | + | chr6_1:86439193-86439212 | Msa0896370:intron | 35.0% | |
| TGATCAGTATATGCAAGATC+AGG | - | chr6_1:86439242-86439261 | None:intergenic | 35.0% | |
| CTTGCATATACTGATCAATG+GGG | + | chr6_1:86439245-86439264 | Msa0896370:CDS | 35.0% | |
| GACAATTTCAAACACCTTCT+TGG | + | chr6_1:86439371-86439390 | Msa0896370:CDS | 35.0% | |
| TGGTGATAGAACATCAAGTA+AGG | - | chr6_1:86439811-86439830 | None:intergenic | 35.0% | |
| TTCTATCACCATCACAATTC+AGG | + | chr6_1:86439820-86439839 | Msa0896370:intron | 35.0% | |
| TTGGATTTCCTGAATTGTGA+TGG | - | chr6_1:86439831-86439850 | None:intergenic | 35.0% | |
| ACAATTCAGGAAATCCAAGT+TGG | + | chr6_1:86439833-86439852 | Msa0896370:intron | 35.0% | |
| AATGGAACATGGAAATTTCC+AGG | + | chr6_1:86439902-86439921 | Msa0896370:CDS | 35.0% | |
| ACATGGAAATTTCCAGGAAT+TGG | + | chr6_1:86439908-86439927 | Msa0896370:CDS | 35.0% | |
| TGCTTTCCAATGCTATGATA+AGG | + | chr6_1:86439931-86439950 | Msa0896370:CDS | 35.0% | |
| GAAAGAGTTCAAAAGGATGA+GGG | - | chr6_1:86439984-86440003 | None:intergenic | 35.0% | |
| AGAAAGAGTTCAAAAGGATG+AGG | - | chr6_1:86439985-86440004 | None:intergenic | 35.0% | |
| !! | ACTAACTTTTTCCGCAAAGA+AGG | + | chr6_1:86440178-86440197 | Msa0896370:CDS | 35.0% |
| ACAAATCTTGGTTCATCCTA+AGG | - | chr6_1:86440699-86440718 | None:intergenic | 35.0% | |
| !! | GGAAAAGTGCCAATAAATGT+TGG | + | chr6_1:86440773-86440792 | Msa0896370:CDS | 35.0% |
| ATTAGGAAACAGTCACAAGT+AGG | + | chr6_1:86440899-86440918 | Msa0896370:three_prime_UTR | 35.0% | |
| TGATCTTGTTGCCATACATA+AGG | + | chr6_1:86441121-86441140 | Msa0896370:three_prime_UTR | 35.0% | |
| ! | ACTCAAATTGGTAGTCTCGT+CGG | + | chr6_1:86435434-86435453 | Msa0896370:CDS | 40.0% |
| AACATCAACAGAGCCAACAA+CGG | + | chr6_1:86435478-86435497 | Msa0896370:CDS | 40.0% | |
| CGATCAGACGTTGTAGAAAA+CGG | + | chr6_1:86435563-86435582 | Msa0896370:CDS | 40.0% | |
| AATCAGACCAGATCTGACAT+CGG | + | chr6_1:86435637-86435656 | Msa0896370:CDS | 40.0% | |
| ! | TGAAGCATTAACGATGGATG+TGG | + | chr6_1:86435664-86435683 | Msa0896370:CDS | 40.0% |
| AGAATGAGTTTGTAGCTGGA+GGG | + | chr6_1:86435690-86435709 | Msa0896370:CDS | 40.0% | |
| AAGACGAAGAAAGAGAAGAG+TGG | + | chr6_1:86435713-86435732 | Msa0896370:CDS | 40.0% | |
| GAATGGTGTGAATAGGAAGA+AGG | + | chr6_1:86435781-86435800 | Msa0896370:CDS | 40.0% | |
| GTATAATTGGGGTGGGTATA+TGG | + | chr6_1:86435901-86435920 | Msa0896370:CDS | 40.0% | |
| ATGGAAATGGCGAAGAAACA+TGG | + | chr6_1:86435929-86435948 | Msa0896370:CDS | 40.0% | |
| TGGAAATGGCGAAGAAACAT+GGG | + | chr6_1:86435930-86435949 | Msa0896370:CDS | 40.0% | |
| GAAACATGGGCTTAAAGTTC+AGG | + | chr6_1:86435943-86435962 | Msa0896370:CDS | 40.0% | |
| GGAGTACAAACTAGTTGCAT+TGG | - | chr6_1:86437538-86437557 | None:intergenic | 40.0% | |
| !! | CGACACTCATTTTTAAACGG+AGG | - | chr6_1:86437560-86437579 | None:intergenic | 40.0% |
| ! | GTGTGCAGAGTATTAATTGG+AGG | - | chr6_1:86437664-86437683 | None:intergenic | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+GGG | + | chr6_1:86437802-86437821 | Msa0896370:intron | 40.0% |
| CCTTTAATTGACGGCTTATG+GGG | - | chr6_1:86438108-86438127 | None:intergenic | 40.0% | |
| GAGGACAGCATACAAAAAAG+AGG | - | chr6_1:86438147-86438166 | None:intergenic | 40.0% | |
| ! | ATGAGCTTGCCATGTGTTTT+GGG | + | chr6_1:86438341-86438360 | Msa0896370:intron | 40.0% |
| AAAAGTAGGCCCTTTACGTA+AGG | + | chr6_1:86438786-86438805 | Msa0896370:intron | 40.0% | |
| AAAGTAGGCCCTTTACGTAA+GGG | + | chr6_1:86438787-86438806 | Msa0896370:intron | 40.0% | |
| !! | ACATAGCTACTCCACTTTTG+TGG | - | chr6_1:86438851-86438870 | None:intergenic | 40.0% |
| ATCTCTTCTACAGCCCATTT+AGG | - | chr6_1:86439209-86439228 | None:intergenic | 40.0% | |
| !! | TAAATGGGCTGTAGAAGAGA+TGG | + | chr6_1:86439208-86439227 | Msa0896370:CDS | 40.0% |
| TGATACTTTGCCTGTACTCA+AGG | + | chr6_1:86439301-86439320 | Msa0896370:CDS | 40.0% | |
| GATACTTTGCCTGTACTCAA+GGG | + | chr6_1:86439302-86439321 | Msa0896370:CDS | 40.0% | |
| TGATTTCATGCGTGCTTTCA+GGG | + | chr6_1:86439349-86439368 | Msa0896370:CDS | 40.0% | |
| ! | TCAGGAAATCCAAGTTGGAA+TGG | + | chr6_1:86439838-86439857 | Msa0896370:intron | 40.0% |
| ! | CAGGAAATCCAAGTTGGAAT+GGG | + | chr6_1:86439839-86439858 | Msa0896370:intron | 40.0% |
| !! | CATTTTGCTCTGGGTATGAT+GGG | - | chr6_1:86439886-86439905 | None:intergenic | 40.0% |
| ! | TCCATGTTCCATTTTGCTCT+GGG | - | chr6_1:86439895-86439914 | None:intergenic | 40.0% |
| ! | TTCCATGTTCCATTTTGCTC+TGG | - | chr6_1:86439896-86439915 | None:intergenic | 40.0% |
| CGGAAAAAGTTAGTGTCTTC+TGG | - | chr6_1:86440172-86440191 | None:intergenic | 40.0% | |
| !! | AACTTTTTCCGCAAAGAAGG+TGG | + | chr6_1:86440181-86440200 | Msa0896370:CDS | 40.0% |
| ! | ACGGTGAATTTTTCCTCACA+TGG | + | chr6_1:86440221-86440240 | Msa0896370:CDS | 40.0% |
| TCTCAAATGCTGTTGAACCA+TGG | + | chr6_1:86440247-86440266 | Msa0896370:CDS | 40.0% | |
| AAGATATCCGTGAAAGTTGC+CGG | + | chr6_1:86440319-86440338 | Msa0896370:CDS | 40.0% | |
| ATGAATACCGGCAACTTTCA+CGG | - | chr6_1:86440329-86440348 | None:intergenic | 40.0% | |
| TGAAAGTTGCCGGTATTCAT+TGG | + | chr6_1:86440329-86440348 | Msa0896370:CDS | 40.0% | |
| ACCATAGTGCCAATGAATAC+CGG | - | chr6_1:86440341-86440360 | None:intergenic | 40.0% | |
| TTCATTGGCACTATGGTACA+AGG | + | chr6_1:86440344-86440363 | Msa0896370:CDS | 40.0% | |
| TAATACCCTGCTGTTAGTTC+CGG | - | chr6_1:86440379-86440398 | None:intergenic | 40.0% | |
| TAGATGAACCTGTGCTTTCT+GGG | - | chr6_1:86440560-86440579 | None:intergenic | 40.0% | |
| TGTGTGCATTCACATACCTT+AGG | + | chr6_1:86440680-86440699 | Msa0896370:CDS | 40.0% | |
| CACTTGCTCCCAACATTTAT+TGG | - | chr6_1:86440785-86440804 | None:intergenic | 40.0% | |
| CAATAAATGTTGGGAGCAAG+TGG | + | chr6_1:86440783-86440802 | Msa0896370:CDS | 40.0% | |
| TAGGCACAAAATTAGGCTGA+TGG | - | chr6_1:86440944-86440963 | None:intergenic | 40.0% | |
| TCTTGTTGCCATACATAAGG+TGG | + | chr6_1:86441124-86441143 | Msa0896370:three_prime_UTR | 40.0% | |
| !! | AATGATGGACGGTAGAGTAC+AGG | - | chr6_1:86435178-86435197 | None:intergenic | 45.0% |
| TGACAACGTAGATTCGTTGC+TGG | - | chr6_1:86435536-86435555 | None:intergenic | 45.0% | |
| !! | CTTAGTACCGGTGATCTACA+CGG | - | chr6_1:86435608-86435627 | None:intergenic | 45.0% |
| TGTAGATCACCGGTACTAAG+CGG | + | chr6_1:86435608-86435627 | Msa0896370:CDS | 45.0% | |
| TGTCAGATCTGGTCTGATTC+CGG | - | chr6_1:86435636-86435655 | None:intergenic | 45.0% | |
| ! | GGCTTGTGAAGCATTAACGA+TGG | + | chr6_1:86435658-86435677 | Msa0896370:CDS | 45.0% |
| AGCATTAACGATGGATGTGG+TGG | + | chr6_1:86435667-86435686 | Msa0896370:CDS | 45.0% | |
| GTGGAGAATGAGTTTGTAGC+TGG | + | chr6_1:86435686-86435705 | Msa0896370:CDS | 45.0% | |
| GAGAATGAGTTTGTAGCTGG+AGG | + | chr6_1:86435689-86435708 | Msa0896370:CDS | 45.0% | |
| AACGGCATCATCACATACAC+CGG | - | chr6_1:86435743-86435762 | None:intergenic | 45.0% | |
| CCCATCGTCACACTATCTAA+CGG | - | chr6_1:86435761-86435780 | None:intergenic | 45.0% | |
| CCGTTAGATAGTGTGACGAT+GGG | + | chr6_1:86435758-86435777 | Msa0896370:CDS | 45.0% | |
| CGTTAGATAGTGTGACGATG+GGG | + | chr6_1:86435759-86435778 | Msa0896370:CDS | 45.0% | |
| TGGTGTGAATAGGAAGAAGG+CGG | + | chr6_1:86435784-86435803 | Msa0896370:CDS | 45.0% | |
| ! | AGAAGCCAGGGGAGTATAAT+TGG | + | chr6_1:86435888-86435907 | Msa0896370:CDS | 45.0% |
| ! | GAAGCCAGGGGAGTATAATT+GGG | + | chr6_1:86435889-86435908 | Msa0896370:CDS | 45.0% |
| ! | AAGCCAGGGGAGTATAATTG+GGG | + | chr6_1:86435890-86435909 | Msa0896370:CDS | 45.0% |
| ACATGGGCTTAAAGTTCAGG+CGG | + | chr6_1:86435946-86435965 | Msa0896370:CDS | 45.0% | |
| ! | CATCAATGTGGTGGTAACGT+TGG | + | chr6_1:86435980-86435999 | Msa0896370:CDS | 45.0% |
| GAAGAAAGAGACTCACGTGA+CGG | - | chr6_1:86436011-86436030 | None:intergenic | 45.0% | |
| ! | GTTGCATTGGGTTGCCAAAT+TGG | - | chr6_1:86437525-86437544 | None:intergenic | 45.0% |
| !!! | CGACACTCATTTTGAAACGG+AGG | + | chr6_1:86437801-86437820 | Msa0896370:intron | 45.0% |
| CCCCATAAGCCGTCAATTAA+AGG | + | chr6_1:86438105-86438124 | Msa0896370:intron | 45.0% | |
| CCAATTGAGTTAAGCTCACG+AGG | - | chr6_1:86438166-86438185 | None:intergenic | 45.0% | |
| CCTCGTGAGCTTAACTCAAT+TGG | + | chr6_1:86438163-86438182 | Msa0896370:intron | 45.0% | |
| ! | GATGAGCTTGCCATGTGTTT+TGG | + | chr6_1:86438340-86438359 | Msa0896370:intron | 45.0% |
| ! | TGAGCTTGCCATGTGTTTTG+GGG | + | chr6_1:86438342-86438361 | Msa0896370:intron | 45.0% |
| AAGTCCAACCCCAAAACACA+TGG | - | chr6_1:86438353-86438372 | None:intergenic | 45.0% | |
| !!! | ATGTGTTTTGGGGTTGGACT+TGG | + | chr6_1:86438352-86438371 | Msa0896370:intron | 45.0% |
| TTGGTCTGCCCTTACGTAAA+GGG | - | chr6_1:86438798-86438817 | None:intergenic | 45.0% | |
| TTTGGTCTGCCCTTACGTAA+AGG | - | chr6_1:86438799-86438818 | None:intergenic | 45.0% | |
| CATCAACATCGCCACAAAAG+TGG | + | chr6_1:86438837-86438856 | Msa0896370:intron | 45.0% | |
| TCTACAGCCCATTTAGGCAA+AGG | - | chr6_1:86439203-86439222 | None:intergenic | 45.0% | |
| CTGATTTCATGCGTGCTTTC+AGG | + | chr6_1:86439348-86439367 | Msa0896370:CDS | 45.0% | |
| !! | CCATTTTGCTCTGGGTATGA+TGG | - | chr6_1:86439887-86439906 | None:intergenic | 45.0% |
| CCATCATACCCAGAGCAAAA+TGG | + | chr6_1:86439884-86439903 | Msa0896370:CDS | 45.0% | |
| ACCCAGAGCAAAATGGAACA+TGG | + | chr6_1:86439891-86439910 | Msa0896370:CDS | 45.0% | |
| !! | CATTGGAAAGCACCAATTCC+TGG | - | chr6_1:86439923-86439942 | None:intergenic | 45.0% |
| TTGTACTCACCTGCATCAGT+AGG | - | chr6_1:86440142-86440161 | None:intergenic | 45.0% | |
| ATGCAGGTGAGTACAACAAC+TGG | + | chr6_1:86440146-86440165 | Msa0896370:CDS | 45.0% | |
| ! | TTTTTCCGCAAAGAAGGTGG+AGG | + | chr6_1:86440184-86440203 | Msa0896370:CDS | 45.0% |
| !! | GCATTTGAGAGTACCATGTG+AGG | - | chr6_1:86440237-86440256 | None:intergenic | 45.0% |
| ATGTGAGAATCCTCTCACCA+TGG | - | chr6_1:86440267-86440286 | None:intergenic | 45.0% | |
| CCAACATTTGAGCGATTGGA+AGG | - | chr6_1:86440426-86440445 | None:intergenic | 45.0% | |
| CCTTCCAATCGCTCAAATGT+TGG | + | chr6_1:86440423-86440442 | Msa0896370:CDS | 45.0% | |
| ACTTGATTCACGAGCTTCTC+CGG | - | chr6_1:86440526-86440545 | None:intergenic | 45.0% | |
| ! | TTTAGCTACCCAGAAAGCAC+AGG | + | chr6_1:86440549-86440568 | Msa0896370:CDS | 45.0% |
| CTAGATGAACCTGTGCTTTC+TGG | - | chr6_1:86440561-86440580 | None:intergenic | 45.0% | |
| AAAGCACAGGTTCATCTAGC+CGG | + | chr6_1:86440562-86440581 | Msa0896370:CDS | 45.0% | |
| TGTGCATGTTCATCATACCG+TGG | - | chr6_1:86440601-86440620 | None:intergenic | 45.0% | |
| GTTGAATGTCGAGGGTAACT+CGG | + | chr6_1:86440645-86440664 | Msa0896370:CDS | 45.0% | |
| AGGAAACAGTCACAAGTAGG+TGG | + | chr6_1:86440902-86440921 | Msa0896370:three_prime_UTR | 45.0% | |
| !!! | TAAGAAATTTTTTTTTTATA+GGG | - | chr6_1:86436542-86436561 | None:intergenic | 5.0% |
| !!! | ATAAGAAATTTTTTTTTTAT+AGG | - | chr6_1:86436543-86436562 | None:intergenic | 5.0% |
| AACGGTGGAGATGGTGTGAA+TGG | - | chr6_1:86435155-86435174 | None:intergenic | 50.0% | |
| TGGACGGTAGAGTACAGGAA+CGG | - | chr6_1:86435173-86435192 | None:intergenic | 50.0% | |
| ! | TTGCGTGGAGGAATGATGGA+CGG | - | chr6_1:86435189-86435208 | None:intergenic | 50.0% |
| AGTGTTGCGTGGAGGAATGA+TGG | - | chr6_1:86435193-86435212 | None:intergenic | 50.0% | |
| !! | ACACGTGTAAGAGTGTTGCG+TGG | - | chr6_1:86435204-86435223 | None:intergenic | 50.0% |
| AAAGAGAAGGAGGGAGGTTG+AGG | - | chr6_1:86435273-86435292 | None:intergenic | 50.0% | |
| GGTGATCTACACGGACTCAT+CGG | - | chr6_1:86435599-86435618 | None:intergenic | 50.0% | |
| GATGAGTCCGTGTAGATCAC+CGG | + | chr6_1:86435598-86435617 | Msa0896370:CDS | 50.0% | |
| ATTCCGGTACCGCTTAGTAC+CGG | - | chr6_1:86435620-86435639 | None:intergenic | 50.0% | |
| TCACAAGCCGATGTCAGATC+TGG | - | chr6_1:86435647-86435666 | None:intergenic | 50.0% | |
| GAAAGAGAAGAGTGGAGTCC+CGG | + | chr6_1:86435721-86435740 | Msa0896370:CDS | 50.0% | |
| ACGGCATCATCACATACACC+GGG | - | chr6_1:86435742-86435761 | None:intergenic | 50.0% | |
| GCCGTTAGATAGTGTGACGA+TGG | + | chr6_1:86435757-86435776 | Msa0896370:CDS | 50.0% | |
| GATAGTGTGACGATGGGGAA+TGG | + | chr6_1:86435764-86435783 | Msa0896370:CDS | 50.0% | |
| CGATGGGGAATGGTGTGAAT+AGG | + | chr6_1:86435774-86435793 | Msa0896370:CDS | 50.0% | |
| TAGGAAGAAGGCGGTGAATG+TGG | + | chr6_1:86435793-86435812 | Msa0896370:CDS | 50.0% | |
| !! | TTGAAGAGTGCTGGTGTGGA+AGG | + | chr6_1:86435827-86435846 | Msa0896370:CDS | 50.0% |
| !! | TGAAGAGTGCTGGTGTGGAA+GGG | + | chr6_1:86435828-86435847 | Msa0896370:CDS | 50.0% |
| !! | AAGGGGTGATGATGGATGTG+TGG | + | chr6_1:86435846-86435865 | Msa0896370:CDS | 50.0% |
| !! | GGTGATGATGGATGTGTGGT+GGG | + | chr6_1:86435850-86435869 | Msa0896370:CDS | 50.0% |
| !! | GTGATGATGGATGTGTGGTG+GGG | + | chr6_1:86435851-86435870 | Msa0896370:CDS | 50.0% |
| ! | CAGGGGAGTATAATTGGGGT+GGG | + | chr6_1:86435894-86435913 | Msa0896370:CDS | 50.0% |
| GGGTGGGTATATGGAGCTTA+TGG | + | chr6_1:86435910-86435929 | Msa0896370:CDS | 50.0% | |
| TTTGATGCCGTATTCCAGCC+CGG | + | chr6_1:86437923-86437942 | Msa0896370:intron | 50.0% | |
| !!! | CTTGCCATGTGTTTTGGGGT+TGG | + | chr6_1:86438346-86438365 | Msa0896370:intron | 50.0% |
| !! | CCACAATGGTGTCACCAAGA+AGG | - | chr6_1:86439388-86439407 | None:intergenic | 50.0% |
| ! | CCTTCTTGGTGACACCATTG+TGG | + | chr6_1:86439385-86439404 | Msa0896370:CDS | 50.0% |
| TGCTGTTGAACCATGGTGAG+AGG | + | chr6_1:86440254-86440273 | Msa0896370:CDS | 50.0% | |
| GCCGGTATTCATTGGCACTA+TGG | + | chr6_1:86440337-86440356 | Msa0896370:CDS | 50.0% | |
| TGGTACAAGGTCTCATGCTC+CGG | + | chr6_1:86440357-86440376 | Msa0896370:CDS | 50.0% | |
| ATGCTCCGGAACTAACAGCA+GGG | + | chr6_1:86440371-86440390 | Msa0896370:CDS | 50.0% | |
| CTCGCCAACATTTGAGCGAT+TGG | - | chr6_1:86440430-86440449 | None:intergenic | 50.0% | |
| GCTCAAATGTTGGCGAGACA+CGG | + | chr6_1:86440433-86440452 | Msa0896370:CDS | 50.0% | |
| TCAGGATGCACAATGTGCAC+CGG | + | chr6_1:86440504-86440523 | Msa0896370:CDS | 50.0% | |
| GGAGAAGCTCGTGAATCAAG+TGG | + | chr6_1:86440525-86440544 | Msa0896370:CDS | 50.0% | |
| AAGCACAGGTTCATCTAGCC+GGG | + | chr6_1:86440563-86440582 | Msa0896370:CDS | 50.0% | |
| GTTACCCTCGACATTCAACG+CGG | - | chr6_1:86440644-86440663 | None:intergenic | 50.0% | |
| AATGTTGGGAGCAAGTGGAG+AGG | + | chr6_1:86440788-86440807 | Msa0896370:CDS | 50.0% | |
| ATGTTGGGAGCAAGTGGAGA+GGG | + | chr6_1:86440789-86440808 | Msa0896370:CDS | 50.0% | |
| TACACAGCCTCTTGTGCAAG+AGG | + | chr6_1:86440834-86440853 | Msa0896370:CDS | 50.0% | |
| GAGTACAGGAACGGTGGAGA+TGG | - | chr6_1:86435164-86435183 | None:intergenic | 55.0% | |
| ACGGTAGAGTACAGGAACGG+TGG | - | chr6_1:86435170-86435189 | None:intergenic | 55.0% | |
| !! | CGTGTAAGAGTGTTGCGTGG+AGG | - | chr6_1:86435201-86435220 | None:intergenic | 55.0% |
| GCGTTCATGGAAGCCGTTGT+TGG | - | chr6_1:86435494-86435513 | None:intergenic | 55.0% | |
| CCATACTGCTGCTGCGTTCA+TGG | - | chr6_1:86435507-86435526 | None:intergenic | 55.0% | |
| CCATGAACGCAGCAGCAGTA+TGG | + | chr6_1:86435504-86435523 | Msa0896370:CDS | 55.0% | |
| GATCTACACGGACTCATCGG+CGG | - | chr6_1:86435596-86435615 | None:intergenic | 55.0% | |
| TCACCGGTACTAAGCGGTAC+CGG | + | chr6_1:86435614-86435633 | Msa0896370:CDS | 55.0% | |
| !! | GAAGAGTGCTGGTGTGGAAG+GGG | + | chr6_1:86435829-86435848 | Msa0896370:CDS | 55.0% |
| TGGTGTGGAAGGGGTGATGA+TGG | + | chr6_1:86435838-86435857 | Msa0896370:CDS | 55.0% | |
| !! | GGGTGATGATGGATGTGTGG+TGG | + | chr6_1:86435849-86435868 | Msa0896370:CDS | 55.0% |
| ! | GATGGATGTGTGGTGGGGAT+TGG | + | chr6_1:86435856-86435875 | Msa0896370:CDS | 55.0% |
| CCACCCCAATTATACTCCCC+TGG | - | chr6_1:86435896-86435915 | None:intergenic | 55.0% | |
| ! | CCAGGGGAGTATAATTGGGG+TGG | + | chr6_1:86435893-86435912 | Msa0896370:CDS | 55.0% |
| TTGATGCCGTATTCCAGCCC+GGG | + | chr6_1:86437924-86437943 | Msa0896370:intron | 55.0% | |
| ! | ACCTTTCCCGGGCTGGAATA+CGG | - | chr6_1:86437933-86437952 | None:intergenic | 55.0% |
| ! | TCCAGCCCGGGAAAGGTTTT+TGG | + | chr6_1:86437936-86437955 | Msa0896370:intron | 55.0% |
| ACCAAAAACCTTTCCCGGGC+TGG | - | chr6_1:86437940-86437959 | None:intergenic | 55.0% | |
| AAGGTTCGGGGTTCAAACCC+CGG | + | chr6_1:86438209-86438228 | Msa0896370:intron | 55.0% | |
| GGACTTCTGCCCTTGAGTAC+AGG | - | chr6_1:86439314-86439333 | None:intergenic | 55.0% | |
| CAGCTGGTCCCATTCCAACT+TGG | - | chr6_1:86439850-86439869 | None:intergenic | 55.0% | |
| ! | CAAGTTGGAATGGGACCAGC+TGG | + | chr6_1:86439848-86439867 | Msa0896370:CDS | 55.0% |
| CATGCTCCGGAACTAACAGC+AGG | + | chr6_1:86440370-86440389 | Msa0896370:CDS | 55.0% | |
| TACAACACCCGTAACCGCGA+TGG | + | chr6_1:86440397-86440416 | Msa0896370:CDS | 55.0% | |
| AAGGTAGCCATCGCGGTTAC+GGG | - | chr6_1:86440407-86440426 | None:intergenic | 55.0% | |
| GAAGGTAGCCATCGCGGTTA+CGG | - | chr6_1:86440408-86440427 | None:intergenic | 55.0% | |
| CGATTGGAAGGTAGCCATCG+CGG | - | chr6_1:86440414-86440433 | None:intergenic | 55.0% | |
| GGTGCACATTGTGCATCCTG+AGG | - | chr6_1:86440505-86440524 | None:intergenic | 55.0% | |
| AGCACAGGTTCATCTAGCCG+GGG | + | chr6_1:86440564-86440583 | Msa0896370:CDS | 55.0% | |
| !! | CCGTGGCAAAGCATTTTCCC+CGG | - | chr6_1:86440584-86440603 | None:intergenic | 55.0% |
| CCGGGGAAAATGCTTTGCCA+CGG | + | chr6_1:86440581-86440600 | Msa0896370:CDS | 55.0% | |
| GCAACAGCCTCTTGCACAAG+AGG | - | chr6_1:86440844-86440863 | None:intergenic | 55.0% | |
| GAAGGCGGTGAATGTGGCGA+TGG | + | chr6_1:86435799-86435818 | Msa0896370:CDS | 60.0% | |
| ! | ATGGCGGCGTTGAAGAGTGC+TGG | + | chr6_1:86435818-86435837 | Msa0896370:CDS | 60.0% |
| !! | GGCGTTGAAGAGTGCTGGTG+TGG | + | chr6_1:86435823-86435842 | Msa0896370:CDS | 60.0% |
| ! | GGATGTGTGGTGGGGATTGG+TGG | + | chr6_1:86435859-86435878 | Msa0896370:CDS | 60.0% |
| ! | TGTGGTGGGGATTGGTGGAG+AGG | + | chr6_1:86435864-86435883 | Msa0896370:CDS | 60.0% |
| ! | GTGGTGGGGATTGGTGGAGA+GGG | + | chr6_1:86435865-86435884 | Msa0896370:CDS | 60.0% |
| TTGGTGGAGAGGGAGAAGCC+AGG | + | chr6_1:86435875-86435894 | Msa0896370:CDS | 60.0% | |
| TGGTGGAGAGGGAGAAGCCA+GGG | + | chr6_1:86435876-86435895 | Msa0896370:CDS | 60.0% | |
| GGGTAACGTAGCTCACCAGC+TGG | - | chr6_1:86439866-86439885 | None:intergenic | 60.0% | |
| AGCACGGGACCTACTGATGC+AGG | + | chr6_1:86440130-86440149 | Msa0896370:CDS | 60.0% | |
| TCCGCAAAGAAGGTGGAGGC+TGG | + | chr6_1:86440188-86440207 | Msa0896370:CDS | 60.0% | |
| CCCAGCCTCCACCTTCTTTG+CGG | - | chr6_1:86440192-86440211 | None:intergenic | 60.0% | |
| CCGCAAAGAAGGTGGAGGCT+GGG | + | chr6_1:86440189-86440208 | Msa0896370:CDS | 60.0% | |
| GGAGGCTGGGACAGCGAATA+CGG | + | chr6_1:86440202-86440221 | Msa0896370:CDS | 60.0% | |
| GCGTCCGCGTTGAATGTCGA+GGG | + | chr6_1:86440637-86440656 | Msa0896370:CDS | 60.0% | |
| GGCGGTGAATGTGGCGATGG+CGG | + | chr6_1:86435802-86435821 | Msa0896370:CDS | 65.0% | |
| GGTGGAGAGGGAGAAGCCAG+GGG | + | chr6_1:86435877-86435896 | Msa0896370:CDS | 65.0% | |
| GCCGTATTCCAGCCCGGGAA+AGG | + | chr6_1:86437929-86437948 | Msa0896370:intron | 65.0% | |
| GCGTGATCACGAGCAGCCTC+AGG | + | chr6_1:86440486-86440505 | Msa0896370:CDS | 65.0% | |
| GGCGTCCGCGTTGAATGTCG+AGG | + | chr6_1:86440636-86440655 | Msa0896370:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_1 | gene | 86435125 | 86441177 | 86435125 | ID=Msa0896370;Name=Msa0896370 |
| chr6_1 | mRNA | 86435125 | 86441177 | 86435125 | ID=Msa0896370-mRNA-1;Parent=Msa0896370;Name=Msa0896370-mRNA-1;_AED=0.03;_eAED=0.03;_QI=294|1|1|1|1|1|4|301|573 |
| chr6_1 | exon | 86435125 | 86436014 | 86435125 | ID=Msa0896370-mRNA-1:exon:14587;Parent=Msa0896370-mRNA-1 |
| chr6_1 | exon | 86439196 | 86439406 | 86439196 | ID=Msa0896370-mRNA-1:exon:14588;Parent=Msa0896370-mRNA-1 |
| chr6_1 | exon | 86439842 | 86439952 | 86439842 | ID=Msa0896370-mRNA-1:exon:14589;Parent=Msa0896370-mRNA-1 |
| chr6_1 | exon | 86440073 | 86441177 | 86440073 | ID=Msa0896370-mRNA-1:exon:14590;Parent=Msa0896370-mRNA-1 |
| chr6_1 | five_prime_UTR | 86435125 | 86435418 | 86435125 | ID=Msa0896370-mRNA-1:five_prime_utr;Parent=Msa0896370-mRNA-1 |
| chr6_1 | CDS | 86435419 | 86436014 | 86435419 | ID=Msa0896370-mRNA-1:cds;Parent=Msa0896370-mRNA-1 |
| chr6_1 | CDS | 86439196 | 86439406 | 86439196 | ID=Msa0896370-mRNA-1:cds;Parent=Msa0896370-mRNA-1 |
| chr6_1 | CDS | 86439842 | 86439952 | 86439842 | ID=Msa0896370-mRNA-1:cds;Parent=Msa0896370-mRNA-1 |
| chr6_1 | CDS | 86440073 | 86440876 | 86440073 | ID=Msa0896370-mRNA-1:cds;Parent=Msa0896370-mRNA-1 |
| chr6_1 | three_prime_UTR | 86440877 | 86441177 | 86440877 | ID=Msa0896370-mRNA-1:three_prime_utr;Parent=Msa0896370-mRNA-1 |
| Gene Sequence |
| Protein sequence |
