Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0923390 | KEH26835.1 | 73.333 | 120 | 14 | 2 | 68 | 169 | 25 | 144 | 2.04e-48 | 166 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0923390 | sp|Q9M1S9|CDT1B_ARATH | 47.761 | 67 | 35 | 0 | 97 | 163 | 390 | 456 | 1.40e-11 | 66.6 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0072120 | Msa0923390 | 0.808624 | 2.826513e-50 | -8.615850e-47 |
| Msa0296480 | Msa0923390 | 0.802402 | 5.707592e-49 | -8.615850e-47 |
| Msa0574600 | Msa0923390 | 0.802445 | 5.592800e-49 | -8.615850e-47 |
| Msa0923390 | Msa0927310 | 0.802623 | 5.138328e-49 | -8.615850e-47 |
| Msa0923390 | Msa1185110 | 0.800080 | 1.704739e-48 | -8.615850e-47 |
| Msa0923390 | Msa1313280 | 0.804008 | 2.654009e-49 | -8.615850e-47 |
| Msa0923390 | Msa1463900 | 0.815127 | 1.083826e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0923390 | MtrunA17_Chr6g0482481 | 69.531 | 128 | 16 | 3 | 68 | 177 | 48 | 170 | 1.44e-49 | 160 |
| Msa0923390 | MtrunA17_Chr6g0482501 | 86.598 | 97 | 8 | 1 | 81 | 177 | 422 | 513 | 1.65e-49 | 169 |
| Msa0923390 | MtrunA17_Chr6g0482501 | 65.957 | 47 | 15 | 1 | 27 | 73 | 53 | 98 | 1.74e-11 | 63.2 |
| Msa0923390 | MtrunA17_Chr6g0482341 | 85.714 | 56 | 7 | 1 | 81 | 136 | 37 | 91 | 2.53e-24 | 92.8 |
| Msa0923390 | MtrunA17_Chr6g0482371 | 51.765 | 85 | 13 | 1 | 82 | 166 | 43 | 99 | 6.49e-16 | 71.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0923390 | AT3G54710.1 | 47.761 | 67 | 35 | 0 | 97 | 163 | 390 | 456 | 1.42e-12 | 66.6 |
Find 69 sgRNAs with CRISPR-Local
Find 354 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTCTATCATATCTTTAAA+TGG | 0.198005 | 6_2:+63821396 | None:intergenic |
| TGCAAGAAGGTGGTTTCTTC+TGG | 0.231585 | 6_2:-63824498 | Msa0923390:CDS |
| AATGATAGGGAGTGTATTTC+TGG | 0.239622 | 6_2:-63824085 | Msa0923390:intron |
| GTAATCGATTTCTTGTTAAT+TGG | 0.243653 | 6_2:-63824877 | Msa0923390:CDS |
| TCTCAAATTACCTTCATTAG+AGG | 0.287597 | 6_2:-63827277 | Msa0923390:five_prime_UTR |
| ATCTCTCAGATTACCTTCAT+TGG | 0.296929 | 6_2:-63826296 | Msa0923390:CDS |
| ATTAGATAAACTTAAAATCT+TGG | 0.302139 | 6_2:-63826494 | Msa0923390:five_prime_UTR |
| ACCTCTCAAATTACCTTCAT+TGG | 0.306849 | 6_2:-63826719 | Msa0923390:five_prime_UTR |
| ACTTCTCAAATTACCTTCAT+TGG | 0.316608 | 6_2:-63826578 | Msa0923390:five_prime_UTR |
| CAATGTAGATCAACATTGTT+TGG | 0.326862 | 6_2:-63824801 | Msa0923390:intron |
| TCCTTCATCATTGGTGGAAC+TGG | 0.334230 | 6_2:-63824762 | Msa0923390:CDS |
| ACTTCTCAGATTACCTTCAT+TGG | 0.338206 | 6_2:-63826437 | Msa0923390:five_prime_UTR |
| TGAAGAACAGATTGAGATAT+TGG | 0.343157 | 6_2:-63824544 | Msa0923390:CDS |
| TGTCAAGAATGTGTTAGATT+TGG | 0.348709 | 6_2:-63824171 | Msa0923390:CDS |
| TCCCATGTTGGATGTATCAT+TGG | 0.355654 | 6_2:-63827214 | Msa0923390:five_prime_UTR |
| TCCGATGTTGGATGAGTCAT+TGG | 0.381763 | 6_2:-63826371 | Msa0923390:exon |
| ATCTGAGAGATGGAATAGTT+TGG | 0.412882 | 6_2:+63826308 | Msa0923400:intron |
| ACCTTCTTGCAAAGCCAGTC+TGG | 0.423623 | 6_2:+63824510 | None:intergenic |
| GAAGGAATGAGAATGGATCT+TGG | 0.428838 | 6_2:-63821378 | Msa0923390:CDS |
| CCATTTAAAGATATGATAGA+AGG | 0.449064 | 6_2:-63821396 | Msa0923390:CDS |
| CAAAAGCTTTGATGAACTGT+TGG | 0.461840 | 6_2:-63821343 | Msa0923390:CDS |
| AAGGAATGAGAATGGATCTT+GGG | 0.462010 | 6_2:-63821377 | Msa0923390:CDS |
| TTAAAATCTTGAAGGTCAAC+CGG | 0.464162 | 6_2:-63826624 | Msa0923390:five_prime_UTR |
| TATGATAGAAGGAATGAGAA+TGG | 0.470612 | 6_2:-63821385 | Msa0923390:CDS |
| ACCAGTTCCACCAATGATGA+AGG | 0.470890 | 6_2:+63824761 | None:intergenic |
| TGGAAAAGACTGTGCCAGAC+TGG | 0.471435 | 6_2:-63824524 | Msa0923390:CDS |
| GTTAATTGGTTTCTCGATGC+AGG | 0.480521 | 6_2:-63824863 | Msa0923390:intron |
| GGATAACAATCCTTCATCAT+TGG | 0.485163 | 6_2:-63824771 | Msa0923390:CDS |
| AGATAAACTTAAAATCTTGA+AGG | 0.487842 | 6_2:-63826632 | Msa0923390:five_prime_UTR |
| TCAACATTGTTTGGTTGCAT+CGG | 0.494504 | 6_2:-63824792 | Msa0923390:CDS |
| TAAGAGTCTTTCTCCCATGT+TGG | 0.494794 | 6_2:-63827226 | Msa0923390:five_prime_UTR |
| CATATGACTTTCTCCCATGT+TGG | 0.495448 | 6_2:-63826665 | Msa0923390:five_prime_UTR |
| TGAGAGTCTTTCTCCGATGT+TGG | 0.498026 | 6_2:-63826383 | Msa0923390:exon |
| TTCAAAATATTTGCAACAAG+AGG | 0.503578 | 6_2:-63825226 | Msa0923390:intron |
| CAAGAGACTTTCTCCCATGT+TGG | 0.504479 | 6_2:-63826524 | Msa0923390:five_prime_UTR |
| AAGAACTTCAATCACAAAAG+AGG | 0.504889 | 6_2:-63824705 | Msa0923390:CDS |
| CTTCTGGAGACACTATGTAC+TGG | 0.511897 | 6_2:-63824482 | Msa0923390:CDS |
| AATGAAGGTAATTTGAGAAG+TGG | 0.512998 | 6_2:+63826580 | Msa0923400:CDS |
| AGATCGAGTTCTTCCAATGA+AGG | 0.515535 | 6_2:+63826565 | Msa0923400:CDS |
| AGATCGAGTTCTTCCAATGA+AGG | 0.515535 | 6_2:+63826706 | Msa0923400:CDS |
| AATGAAGGTAATTTGAGAGA+TGG | 0.535602 | 6_2:+63827282 | None:intergenic |
| CTGGAGACACTATGTACTGG+TGG | 0.537245 | 6_2:-63824479 | Msa0923390:CDS |
| TGAGAGTCTTTCTCCCATGT+TGG | 0.541534 | 6_2:-63827367 | Msa0923390:five_prime_UTR |
| TAACAATCCTTCATCATTGG+TGG | 0.549598 | 6_2:-63824768 | Msa0923390:CDS |
| GCCAGACTGGCTTTGCAAGA+AGG | 0.550066 | 6_2:-63824511 | Msa0923390:CDS |
| AATGAAGGTAATCTGAGAGA+TGG | 0.556400 | 6_2:+63826298 | None:intergenic |
| AGATAGAAGTACTCCAATGA+AGG | 0.557627 | 6_2:+63826283 | None:intergenic |
| TCCAATGAAGGTAATTTGAG+AGG | 0.560716 | 6_2:+63826718 | Msa0923400:CDS |
| AATGAAGGTAATCTGAGAAG+TGG | 0.564358 | 6_2:+63826439 | Msa0923400:CDS |
| AGAGTGAGTTCCTCTAATGA+AGG | 0.567451 | 6_2:+63827267 | None:intergenic |
| AATGAAGGTAATTTGAGAGG+TGG | 0.570640 | 6_2:+63826721 | Msa0923400:CDS |
| ATCTAATGACTCATCCAACA+TGG | 0.571352 | 6_2:+63826510 | Msa0923400:CDS |
| ATCTAATGACTCATCCAACA+TGG | 0.571352 | 6_2:+63826651 | Msa0923400:CDS |
| TGCAATGACTTATCCAACAT+GGG | 0.575916 | 6_2:+63827354 | None:intergenic |
| ATCACTAAACAAATCAGCAA+TGG | 0.581627 | 6_2:+63825298 | None:intergenic |
| ATGCAATGACTTATCCAACA+TGG | 0.588369 | 6_2:+63827353 | None:intergenic |
| TATATATGAGATCAGAACAC+AGG | 0.593137 | 6_2:+63826746 | Msa0923400:CDS |
| AGACTGGCTTTGCAAGAAGG+TGG | 0.594471 | 6_2:-63824508 | Msa0923390:CDS |
| TGGAGACACTATGTACTGGT+GGG | 0.601520 | 6_2:-63824478 | Msa0923390:intron |
| ATCCAATGATACATCCAACA+TGG | 0.611960 | 6_2:+63827212 | None:intergenic |
| TATATACGAGATTAGAACAC+AGG | 0.626588 | 6_2:+63826464 | Msa0923400:CDS |
| TCCAATGACTCATCCAACAT+CGG | 0.630484 | 6_2:+63826370 | Msa0923400:intron |
| TCCAATGATACATCCAACAT+GGG | 0.633486 | 6_2:+63827213 | None:intergenic |
| CTTCTCAGCAATGTGAACAA+AGG | 0.638405 | 6_2:-63824131 | Msa0923390:CDS |
| TCTAATGACTCATCCAACAT+GGG | 0.659328 | 6_2:+63826511 | Msa0923400:CDS |
| TCTAATGACTCATCCAACAT+GGG | 0.659328 | 6_2:+63826652 | Msa0923400:CDS |
| GAACAAAGGAGATGTGTGAA+AGG | 0.665672 | 6_2:-63824117 | Msa0923390:CDS |
| ATATATGAGATCAGAACACA+GGG | 0.665932 | 6_2:+63826747 | Msa0923400:CDS |
| TATATATGAGATCAGAACAC+CGG | 0.683254 | 6_2:+63826605 | Msa0923400:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAATCAATTAAATTTGA+GGG | + | chr6_2:63823523-63823542 | None:intergenic | 10.0% |
| !! | AAATAAATCAATTAAATTTG+AGG | + | chr6_2:63823524-63823543 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTCAAATAATTTC+CGG | + | chr6_2:63823662-63823681 | None:intergenic | 10.0% |
| !! | TTTAACAATAAAGAAAATTA+AGG | + | chr6_2:63823788-63823807 | None:intergenic | 10.0% |
| !!! | TATAACTATATATTTTTCAA+GGG | - | chr6_2:63825145-63825164 | Msa0923390:intron | 10.0% |
| !! | ATTCATAATATAAAATGAAA+GGG | + | chr6_2:63825425-63825444 | None:intergenic | 10.0% |
| !! | TATTCATAATATAAAATGAA+AGG | + | chr6_2:63825426-63825445 | None:intergenic | 10.0% |
| !!! | AACAATATTTTATAAAAAAC+CGG | - | chr6_2:63825784-63825803 | Msa0923390:intron | 10.0% |
| !! | TATAAGAAAGAAAATAAAAA+GGG | + | chr6_2:63826220-63826239 | None:intergenic | 10.0% |
| !! | ATATAAGAAAGAAAATAAAA+AGG | + | chr6_2:63826221-63826240 | None:intergenic | 10.0% |
| !! | ATCTCAAAATAAAAATAAAA+TGG | + | chr6_2:63826268-63826287 | None:intergenic | 10.0% |
| !!! | GGTTTATTTTTAAAAAAAAA+TGG | + | chr6_2:63826781-63826800 | Msa0923400:CDS | 10.0% |
| !! | TTAATTATTATCAATTTCAT+GGG | + | chr6_2:63826833-63826852 | Msa0923400:CDS | 10.0% |
| !!! | ATTGAATAAGCTTAAATTTT+TGG | - | chr6_2:63821786-63821805 | Msa0923390:intron | 15.0% |
| !!! | TTGAATAAGCTTAAATTTTT+GGG | - | chr6_2:63821787-63821806 | Msa0923390:intron | 15.0% |
| !! | ATTAGATAAACTTAAAATCT+TGG | - | chr6_2:63822068-63822087 | Msa0923390:intron | 15.0% |
| !! | TTGAAAAATATATAAATAGG+AGG | + | chr6_2:63823326-63823345 | None:intergenic | 15.0% |
| !!! | TCCTATTTATATATTTTTCA+AGG | - | chr6_2:63823325-63823344 | Msa0923390:intron | 15.0% |
| !! | TCCTTGAAAAATATATAAAT+AGG | + | chr6_2:63823329-63823348 | None:intergenic | 15.0% |
| !!! | AATAGGAAATTATATTTTTC+TGG | + | chr6_2:63823368-63823387 | None:intergenic | 15.0% |
| !!! | ATAATTTCCTATTTTAATAC+AGG | - | chr6_2:63823375-63823394 | Msa0923390:intron | 15.0% |
| !! | AGATTAATGAATGATATAAA+TGG | - | chr6_2:63824891-63824910 | Msa0923390:CDS | 15.0% |
| !! | AAGTTAAAGTTATTAAGTAT+TGG | - | chr6_2:63824998-63825017 | Msa0923390:intron | 15.0% |
| !!! | GTAAGGAATTTTTTTTTTTT+TGG | + | chr6_2:63825095-63825114 | None:intergenic | 15.0% |
| !! | CTTGAAAAATATATAGTTAT+AGG | + | chr6_2:63825146-63825165 | None:intergenic | 15.0% |
| !!! | CTATAACTATATATTTTTCA+AGG | - | chr6_2:63825144-63825163 | Msa0923390:intron | 15.0% |
| !!! | CTTCCATTTATTTTTATAAA+TGG | - | chr6_2:63825184-63825203 | Msa0923390:intron | 15.0% |
| !! | TCTCCATTTATAAAAATAAA+TGG | + | chr6_2:63825190-63825209 | None:intergenic | 15.0% |
| !!! | ATTTATTTTTATAAATGGAG+AGG | - | chr6_2:63825189-63825208 | Msa0923390:intron | 15.0% |
| !!! | TATTATTGGTTTAATATTGT+AGG | + | chr6_2:63825357-63825376 | None:intergenic | 15.0% |
| !! | ATATACAACTAGTATATTAT+TGG | + | chr6_2:63825371-63825390 | None:intergenic | 15.0% |
| !! | ATATACTAGTTGTATATAAT+TGG | - | chr6_2:63825374-63825393 | Msa0923390:intron | 15.0% |
| !! | TTTAGTATTAAATGTATTAG+TGG | - | chr6_2:63825507-63825526 | Msa0923390:intron | 15.0% |
| !! | TATCATAGTCATAAATATAT+AGG | - | chr6_2:63825685-63825704 | Msa0923390:intron | 15.0% |
| !! | TAAAATATTGTTTGAAGAAT+CGG | + | chr6_2:63825776-63825795 | None:intergenic | 15.0% |
| !! | TAAATATGAAAAGAGAAAAT+AGG | - | chr6_2:63826004-63826023 | Msa0923390:intron | 15.0% |
| !! | CAAAATAAAAATAAAATGGA+AGG | + | chr6_2:63826264-63826283 | None:intergenic | 15.0% |
| !! | TAATTATTATCAATTTCATG+GGG | + | chr6_2:63826832-63826851 | Msa0923400:CDS | 15.0% |
| !! | CTTAATTATTATCAATTTCA+TGG | + | chr6_2:63826834-63826853 | Msa0923400:CDS | 15.0% |
| !!! | AGAATATTTTTTTTGTCATA+GGG | + | chr6_2:63826866-63826885 | Msa0923400:CDS | 15.0% |
| !!! | AAGAATATTTTTTTTGTCAT+AGG | + | chr6_2:63826867-63826886 | Msa0923400:CDS | 15.0% |
| !!! | GGATAAACTTAAAATTTTGA+AGG | - | chr6_2:63821510-63821529 | Msa0923390:intron | 20.0% |
| !!! | GGATAAACTTAAAATTTTGA+TGG | - | chr6_2:63821510-63821529 | Msa0923390:intron | 20.0% |
| !!! | GGATAAACTTAAAATTTTGA+AGG | - | chr6_2:63821510-63821529 | Msa0923390:intron | 20.0% |
| !! | AGATAAACTTAAAATCTTGA+AGG | - | chr6_2:63822071-63822090 | Msa0923390:intron | 20.0% |
| !! | CTTATATTCTTGAAGATTAA+AGG | - | chr6_2:63822783-63822802 | Msa0923390:intron | 20.0% |
| !! | CTTAAAATATTGAGATTTGA+TGG | - | chr6_2:63822924-63822943 | Msa0923390:intron | 20.0% |
| !! | GATATTAGATATCAAGAATA+TGG | + | chr6_2:63823727-63823746 | None:intergenic | 20.0% |
| !!! | TTATAATGTACATGTTTTCT+TGG | - | chr6_2:63824089-63824108 | Msa0923390:CDS | 20.0% |
| !! | ATGAAAATTTCAATCTTCTT+TGG | - | chr6_2:63824331-63824350 | Msa0923390:intron | 20.0% |
| !! | ATATATCATCATGGATATAA+TGG | - | chr6_2:63824375-63824394 | Msa0923390:intron | 20.0% |
| !! | TGAATGATATAAATGGAAAA+AGG | - | chr6_2:63824898-63824917 | Msa0923390:intron | 20.0% |
| !! | GAATGATATAAATGGAAAAA+GGG | - | chr6_2:63824899-63824918 | Msa0923390:intron | 20.0% |
| !! | TAATAAGTGTCTTTATTGTT+GGG | + | chr6_2:63825222-63825241 | None:intergenic | 20.0% |
| !! | TTAATAAGTGTCTTTATTGT+TGG | + | chr6_2:63825223-63825242 | None:intergenic | 20.0% |
| !! | AAAAAATTATTTCCAAGACA+AGG | + | chr6_2:63825265-63825284 | None:intergenic | 20.0% |
| !! | TTTCTAAATTCCTTAAACAA+TGG | + | chr6_2:63825631-63825650 | None:intergenic | 20.0% |
| !! | TAAACAATGTTTGAAAGATA+AGG | - | chr6_2:63825733-63825752 | Msa0923390:intron | 20.0% |
| !! | ATCACAATGTATGAAAAAAT+AGG | - | chr6_2:63825889-63825908 | Msa0923390:intron | 20.0% |
| !!! | TGACAATTTTTTGAAAATAC+GGG | + | chr6_2:63826169-63826188 | None:intergenic | 20.0% |
| !!! | GTGACAATTTTTTGAAAATA+CGG | + | chr6_2:63826170-63826189 | None:intergenic | 20.0% |
| !! | TGAATTATATGGTGAAATTA+AGG | + | chr6_2:63826356-63826375 | Msa0923400:intron | 20.0% |
| !! | TAATTTCACCATATAATTCA+TGG | - | chr6_2:63826356-63826375 | Msa0923390:CDS | 20.0% |
| !!! | TTTTAAGTTGTTTTGTTTTG+TGG | + | chr6_2:63826510-63826529 | Msa0923400:CDS | 20.0% |
| !!! | GGATTTTTTAAGTTTCTTAA+AGG | + | chr6_2:63826620-63826639 | Msa0923400:CDS | 20.0% |
| !! | TCATAACTGTAAAAAAAATC+CGG | + | chr6_2:63826802-63826821 | Msa0923400:CDS | 20.0% |
| !!! | AAGAAAAGTCTTTTTCTAAT+GGG | + | chr6_2:63827206-63827225 | None:intergenic | 20.0% |
| !!! | AAAGAAAAGTCTTTTTCTAA+TGG | + | chr6_2:63827207-63827226 | None:intergenic | 20.0% |
| !! | TTTTGATATTTGGACAATTG+AGG | + | chr6_2:63821396-63821415 | None:intergenic | 25.0% |
| !!! | GATGGAATAGTTTTGATATT+TGG | + | chr6_2:63821406-63821425 | None:intergenic | 25.0% |
| ! | TTTCTAATGAAGGTAATTTG+AGG | + | chr6_2:63821570-63821589 | None:intergenic | 25.0% |
| !! | AATGAAGTTAATTTGAGAAG+TGG | + | chr6_2:63821844-63821863 | None:intergenic | 25.0% |
| ! | ACTTCTCAAATTAACTTCAT+TGG | - | chr6_2:63821843-63821862 | Msa0923390:intron | 25.0% |
| !! | GGATAAGCTTGAAATTTTAA+AGG | - | chr6_2:63822353-63822372 | Msa0923390:intron | 25.0% |
| !! | TCGATAAGCTTAAAATTTTG+AGG | - | chr6_2:63822634-63822653 | Msa0923390:intron | 25.0% |
| !! | CGATAAGCTTAAAATTTTGA+GGG | - | chr6_2:63822635-63822654 | Msa0923390:intron | 25.0% |
| ! | TATTCTTGAAGATTAAAGGT+TGG | - | chr6_2:63822787-63822806 | Msa0923390:intron | 25.0% |
| !!! | ATTTTTTCAAGTATCACCAT+GGG | - | chr6_2:63822888-63822907 | Msa0923390:intron | 25.0% |
| !! | TGGAATATTTTACGTAGATA+AGG | - | chr6_2:63822944-63822963 | Msa0923390:intron | 25.0% |
| ! | GCTTATTAATAACAATCAAC+AGG | + | chr6_2:63823129-63823148 | None:intergenic | 25.0% |
| !!! | ATTATATTTTTCTGGAAGGT+GGG | + | chr6_2:63823360-63823379 | None:intergenic | 25.0% |
| !!! | AATTATATTTTTCTGGAAGG+TGG | + | chr6_2:63823361-63823380 | None:intergenic | 25.0% |
| !! | GGAAATTATATTTTTCTGGA+AGG | + | chr6_2:63823364-63823383 | None:intergenic | 25.0% |
| ! | TCTTGAACCTGTATTAAAAT+AGG | + | chr6_2:63823385-63823404 | None:intergenic | 25.0% |
| ! | TTCAAAATATTTGCAACAAG+AGG | - | chr6_2:63823477-63823496 | Msa0923390:intron | 25.0% |
| ! | ATCAAAATACAGCCATAAAA+TGG | + | chr6_2:63823558-63823577 | None:intergenic | 25.0% |
| ! | TATCAAGAATATGGAAGTAA+GGG | + | chr6_2:63823718-63823737 | None:intergenic | 25.0% |
| ! | ATATCAAGAATATGGAAGTA+AGG | + | chr6_2:63823719-63823738 | None:intergenic | 25.0% |
| !! | GTAATCGATTTCTTGTTAAT+TGG | - | chr6_2:63823826-63823845 | Msa0923390:intron | 25.0% |
| !! | TTTCTTGGTAATAAACATTC+TGG | - | chr6_2:63824104-63824123 | Msa0923390:CDS | 25.0% |
| !! | ATAACTAGTTTGAAGTCAAT+GGG | + | chr6_2:63824456-63824475 | None:intergenic | 25.0% |
| !! | AATAACTAGTTTGAAGTCAA+TGG | + | chr6_2:63824457-63824476 | None:intergenic | 25.0% |
| ! | GAAATTTGTAGTAATGTACA+AGG | - | chr6_2:63825452-63825471 | Msa0923390:intron | 25.0% |
| !!! | GATGTTTGATGACAATTTTT+AGG | - | chr6_2:63825929-63825948 | Msa0923390:intron | 25.0% |
| ! | AAATAAAGTATGCAAGTTAC+AGG | - | chr6_2:63826129-63826148 | Msa0923390:intron | 25.0% |
| ! | AAATGGAAGGCAAAAAAAAA+AGG | + | chr6_2:63826251-63826270 | None:intergenic | 25.0% |
| ! | TAATTTAGAAGGCTATCTAT+TGG | + | chr6_2:63826311-63826330 | Msa0923400:intron | 25.0% |
| !!! | ACAAGTCTGAATATTTTAGA+AGG | + | chr6_2:63826469-63826488 | Msa0923400:CDS | 25.0% |
| ! | TTAAGTTTCTTAAAGGTCAT+GGG | + | chr6_2:63826613-63826632 | Msa0923400:CDS | 25.0% |
| !! | TTTAAGTTTCTTAAAGGTCA+TGG | + | chr6_2:63826614-63826633 | Msa0923400:CDS | 25.0% |
| ! | CACACAAATCATAAGATATT+GGG | + | chr6_2:63826940-63826959 | None:intergenic | 25.0% |
| ! | AATGTAACATTAATCCTTTG+AGG | - | chr6_2:63826972-63826991 | Msa0923390:intron | 25.0% |
| ! | TGGATTATGTGTAATATGAA+AGG | - | chr6_2:63827011-63827030 | Msa0923390:intron | 25.0% |
| ! | TCTACAAAACCATGATATAT+GGG | + | chr6_2:63827100-63827119 | None:intergenic | 25.0% |
| ! | TTCTACAAAACCATGATATA+TGG | + | chr6_2:63827101-63827120 | None:intergenic | 25.0% |
| ! | ATATAATAAGCTTGCAAGTT+TGG | - | chr6_2:63827147-63827166 | Msa0923390:intron | 25.0% |
| ! | CCTTCTATCATATCTTTAAA+TGG | + | chr6_2:63827310-63827329 | None:intergenic | 25.0% |
| ! | CCATTTAAAGATATGATAGA+AGG | - | chr6_2:63827307-63827326 | Msa0923390:five_prime_UTR | 25.0% |
| AATGAAGGTAATTTGAGAGA+TGG | + | chr6_2:63821424-63821443 | None:intergenic | 30.0% | |
| TCTCAAATTACCTTCATTAG+AGG | - | chr6_2:63821426-63821445 | Msa0923390:intron | 30.0% | |
| ! | AGAGTGAGTTTTTCTAATGA+AGG | + | chr6_2:63821580-63821599 | None:intergenic | 30.0% |
| AATGAAGGTAATTTGAGAAG+TGG | + | chr6_2:63821706-63821725 | None:intergenic | 30.0% | |
| ACTTCTCAAATTACCTTCAT+TGG | - | chr6_2:63821705-63821724 | Msa0923390:intron | 30.0% | |
| ATATATGAGATCAGAACACA+GGG | + | chr6_2:63821959-63821978 | None:intergenic | 30.0% | |
| TATATATGAGATCAGAACAC+AGG | + | chr6_2:63821960-63821979 | None:intergenic | 30.0% | |
| TTAAAATCTTGAAGGTCAAC+CGG | - | chr6_2:63822079-63822098 | Msa0923390:intron | 30.0% | |
| TATATATGAGATCAGAACAC+CGG | + | chr6_2:63821960-63821979 | None:intergenic | 30.0% | |
| AATGAAGGTAATTTGAGAAG+TGG | + | chr6_2:63821706-63821725 | None:intergenic | 30.0% | |
| ACTTCTCAAATTACCTTCAT+TGG | - | chr6_2:63821705-63821724 | Msa0923390:intron | 30.0% | |
| TATATACGAGATTAGAACAC+AGG | + | chr6_2:63822242-63822261 | None:intergenic | 30.0% | |
| ! | AGAAAGAGTTTTTCCAATGA+AGG | + | chr6_2:63822282-63822301 | None:intergenic | 30.0% |
| !! | CTTGAAATTTTAAAGGTCGA+AGG | - | chr6_2:63822360-63822379 | Msa0923390:intron | 30.0% |
| TAAAAGTCTTTCTCCTATGT+TGG | - | chr6_2:63822461-63822480 | Msa0923390:intron | 30.0% | |
| TTGGAGATACTCAATCTTAA+AGG | - | chr6_2:63822567-63822586 | Msa0923390:intron | 30.0% | |
| ATTTGAGAGATGGAATAGTT+TGG | + | chr6_2:63821414-63821433 | None:intergenic | 30.0% | |
| AATGAAGCTAATTTGAGAGA+TGG | + | chr6_2:63822690-63822709 | None:intergenic | 30.0% | |
| !!! | GATTTTTTCAAGTATCACCA+TGG | - | chr6_2:63822887-63822906 | Msa0923390:intron | 30.0% |
| !!! | TTTTTTCAAGTATCACCATG+GGG | - | chr6_2:63822889-63822908 | Msa0923390:intron | 30.0% |
| TGAAAAAGGTTAGATTCTAC+TGG | - | chr6_2:63823222-63823241 | Msa0923390:intron | 30.0% | |
| ATCACTAAACAAATCAGCAA+TGG | + | chr6_2:63823408-63823427 | None:intergenic | 30.0% | |
| ! | TATGGGTACTAACCATTTTA+TGG | - | chr6_2:63823543-63823562 | Msa0923390:intron | 30.0% |
| !! | TTTTCTGAAAAGAATGACCA+AGG | + | chr6_2:63823881-63823900 | None:intergenic | 30.0% |
| CAATGTAGATCAACATTGTT+TGG | - | chr6_2:63823902-63823921 | Msa0923390:intron | 30.0% | |
| AAGAACTTCAATCACAAAAG+AGG | - | chr6_2:63823998-63824017 | Msa0923390:intron | 30.0% | |
| TGAAGAACAGATTGAGATAT+TGG | - | chr6_2:63824159-63824178 | Msa0923390:CDS | 30.0% | |
| CACAACTACATATATCATCA+TGG | - | chr6_2:63824366-63824385 | Msa0923390:intron | 30.0% | |
| TGTCAAGAATGTGTTAGATT+TGG | - | chr6_2:63824532-63824551 | Msa0923390:CDS | 30.0% | |
| CTGGTAATACAAATGATTGT+TGG | - | chr6_2:63824637-63824656 | Msa0923390:intron | 30.0% | |
| ACCAGCTATAGTGAATATAT+TGG | - | chr6_2:63824724-63824743 | Msa0923390:CDS | 30.0% | |
| ! | CTATAGTGAATATATTGGCT+GGG | - | chr6_2:63824729-63824748 | Msa0923390:CDS | 30.0% |
| !!! | CTTTTTTGGTTACATTCTCT+CGG | - | chr6_2:63824845-63824864 | Msa0923390:intron | 30.0% |
| !!! | TTTTTTTTGGTTACACACTC+AGG | + | chr6_2:63825082-63825101 | None:intergenic | 30.0% |
| !! | AAAAAATTGTAGCCTTGTCT+TGG | - | chr6_2:63825250-63825269 | Msa0923390:CDS | 30.0% |
| ACAATGTTTGAAAGATAAGG+TGG | - | chr6_2:63825736-63825755 | Msa0923390:intron | 30.0% | |
| CAATGTTTGAAAGATAAGGT+GGG | - | chr6_2:63825737-63825756 | Msa0923390:intron | 30.0% | |
| TGACATCTATGATTATTCAG+TGG | - | chr6_2:63825839-63825858 | Msa0923390:intron | 30.0% | |
| TCAAACATCATTACTCTTTG+AGG | + | chr6_2:63825918-63825937 | None:intergenic | 30.0% | |
| ! | TCTTCTGTCTCTCTTTTTAT+TGG | - | chr6_2:63825962-63825981 | Msa0923390:intron | 30.0% |
| GAAGGCAAAAAAAAAAGGAT+TGG | + | chr6_2:63826246-63826265 | None:intergenic | 30.0% | |
| TTTCACCATATAATTCATGG+TGG | - | chr6_2:63826359-63826378 | Msa0923390:CDS | 30.0% | |
| ! | TTTTTGCTAAAGGATCTGAT+AGG | + | chr6_2:63826437-63826456 | Msa0923400:CDS | 30.0% |
| CAGATCCTTTAGCAAAAAAA+TGG | - | chr6_2:63826439-63826458 | Msa0923390:five_prime_UTR | 30.0% | |
| !!! | GTTGTCCATTTTTTTGCTAA+AGG | + | chr6_2:63826447-63826466 | Msa0923400:CDS | 30.0% |
| CAATAAGCAATAGACTTTGA+CGG | + | chr6_2:63826544-63826563 | Msa0923400:CDS | 30.0% | |
| CTATTGCTTATTGAGTGAAT+AGG | - | chr6_2:63826551-63826570 | Msa0923390:five_prime_UTR | 30.0% | |
| TTGACGAAAGTTACAATTTC+AGG | + | chr6_2:63826586-63826605 | Msa0923400:CDS | 30.0% | |
| AACCAATGTTTGACAATTTC+AGG | + | chr6_2:63826644-63826663 | Msa0923400:CDS | 30.0% | |
| AAAAAATTACCCTTGTGATG+TGG | + | chr6_2:63826757-63826776 | Msa0923400:CDS | 30.0% | |
| ! | AATAGCGAATCCTTATTTGT+TGG | - | chr6_2:63826908-63826927 | Msa0923390:intron | 30.0% |
| AATCATAAGATATTGGGCAA+GGG | + | chr6_2:63826934-63826953 | None:intergenic | 30.0% | |
| AAATCATAAGATATTGGGCA+AGG | + | chr6_2:63826935-63826954 | None:intergenic | 30.0% | |
| CCACACAAATCATAAGATAT+TGG | + | chr6_2:63826941-63826960 | None:intergenic | 30.0% | |
| ! | CCAATATCTTATGATTTGTG+TGG | - | chr6_2:63826938-63826957 | Msa0923390:intron | 30.0% |
| TACAAAACCATGATATATGG+GGG | + | chr6_2:63827098-63827117 | None:intergenic | 30.0% | |
| CTACAAAACCATGATATATG+GGG | + | chr6_2:63827099-63827118 | None:intergenic | 30.0% | |
| AATAAGTCTTCTAACACTGA+AGG | + | chr6_2:63827261-63827280 | None:intergenic | 30.0% | |
| TATGATAGAAGGAATGAGAA+TGG | - | chr6_2:63827318-63827337 | Msa0923390:five_prime_UTR | 30.0% | |
| TGCAATGACTTATCCAACAT+GGG | + | chr6_2:63821352-63821371 | None:intergenic | 35.0% | |
| ATGCAATGACTTATCCAACA+TGG | + | chr6_2:63821353-63821372 | None:intergenic | 35.0% | |
| TCCAATGATACATCCAACAT+GGG | + | chr6_2:63821493-63821512 | None:intergenic | 35.0% | |
| ATCCAATGATACATCCAACA+TGG | + | chr6_2:63821494-63821513 | None:intergenic | 35.0% | |
| AATGAAGGTAATTTGAGGAG+TGG | + | chr6_2:63821565-63821584 | None:intergenic | 35.0% | |
| TTCAATGACTCATCCAACAT+TGG | + | chr6_2:63821772-63821791 | None:intergenic | 35.0% | |
| !! | CTTAAATTTTTGGGCGTCTA+CGG | - | chr6_2:63821796-63821815 | Msa0923390:intron | 35.0% |
| AATGAAGGTAATTTGAGAGG+TGG | + | chr6_2:63821985-63822004 | None:intergenic | 35.0% | |
| ACCTCTCAAATTACCTTCAT+TGG | - | chr6_2:63821984-63822003 | Msa0923390:intron | 35.0% | |
| TCCAATGAAGGTAATTTGAG+AGG | + | chr6_2:63821709-63821728 | None:intergenic | 35.0% | |
| TCTAATGACTCATCCAACAT+GGG | + | chr6_2:63822054-63822073 | None:intergenic | 35.0% | |
| ATCTAATGACTCATCCAACA+TGG | + | chr6_2:63822055-63822074 | None:intergenic | 35.0% | |
| TCTAATGACTCATCCAACAT+GGG | + | chr6_2:63822054-63822073 | None:intergenic | 35.0% | |
| ATCTAATGACTCATCCAACA+TGG | + | chr6_2:63822055-63822074 | None:intergenic | 35.0% | |
| AATGAAGGTAATCTGAGAAG+TGG | + | chr6_2:63822267-63822286 | None:intergenic | 35.0% | |
| ACTTCTCAGATTACCTTCAT+TGG | - | chr6_2:63822266-63822285 | Msa0923390:intron | 35.0% | |
| ATCTGAGAGATGGAATAGTT+TGG | + | chr6_2:63822398-63822417 | None:intergenic | 35.0% | |
| AATGAAGGTAATCTGAGAGA+TGG | + | chr6_2:63822408-63822427 | None:intergenic | 35.0% | |
| ATCTCTCAGATTACCTTCAT+TGG | - | chr6_2:63822407-63822426 | Msa0923390:intron | 35.0% | |
| !! | AGATAGAAGTACTCCAATGA+AGG | + | chr6_2:63822423-63822442 | None:intergenic | 35.0% |
| AATGAAGCAAATTTGAGAGG+TGG | + | chr6_2:63822549-63822568 | None:intergenic | 35.0% | |
| ! | ACCTCTCAAATTTGCTTCAT+TGG | - | chr6_2:63822548-63822567 | Msa0923390:intron | 35.0% |
| TCCAATGAAGCAAATTTGAG+AGG | + | chr6_2:63822552-63822571 | None:intergenic | 35.0% | |
| TTAAAGGTTGGAATGATCTG+CGG | - | chr6_2:63822799-63822818 | Msa0923390:intron | 35.0% | |
| AGATTGAGTTCTTCCAATGA+AGG | + | chr6_2:63822846-63822865 | None:intergenic | 35.0% | |
| TGAATGATCGAACTCATCTA+AGG | + | chr6_2:63822989-63823008 | None:intergenic | 35.0% | |
| TTAGATGAGTTCGATCATTC+AGG | - | chr6_2:63822988-63823007 | Msa0923390:intron | 35.0% | |
| TCAAAGAGCTACCTAGTAAT+GGG | + | chr6_2:63823078-63823097 | None:intergenic | 35.0% | |
| TTCAAAGAGCTACCTAGTAA+TGG | + | chr6_2:63823079-63823098 | None:intergenic | 35.0% | |
| TGCAAGACAGAATCTGAAAA+AGG | - | chr6_2:63823208-63823227 | Msa0923390:intron | 35.0% | |
| GGAAATATACTATATCCTGC+AGG | - | chr6_2:63823243-63823262 | Msa0923390:intron | 35.0% | |
| !! | AACTTTTAAAAGAGACCTGC+AGG | + | chr6_2:63823261-63823280 | None:intergenic | 35.0% |
| AAATAGTGACATATCGACAC+CGG | - | chr6_2:63823640-63823659 | Msa0923390:intron | 35.0% | |
| TCAACATTGTTTGGTTGCAT+CGG | - | chr6_2:63823911-63823930 | Msa0923390:intron | 35.0% | |
| GGATAACAATCCTTCATCAT+TGG | - | chr6_2:63823932-63823951 | Msa0923390:intron | 35.0% | |
| TAACAATCCTTCATCATTGG+TGG | - | chr6_2:63823935-63823954 | Msa0923390:intron | 35.0% | |
| ACTAATCTTGTCCTCTCAAT+AGG | - | chr6_2:63824130-63824149 | Msa0923390:CDS | 35.0% | |
| GAGATGTGAAAATTTGAGTC+TGG | - | chr6_2:63824302-63824321 | Msa0923390:intron | 35.0% | |
| CTTGACACTGCAAATATAAC+AGG | + | chr6_2:63824519-63824538 | None:intergenic | 35.0% | |
| ! | AAAGGCTTTTGTGGAATGAT+AGG | - | chr6_2:63824604-63824623 | Msa0923390:intron | 35.0% |
| ! | AAGGCTTTTGTGGAATGATA+GGG | - | chr6_2:63824605-63824624 | Msa0923390:intron | 35.0% |
| ! | AATGATAGGGAGTGTATTTC+TGG | - | chr6_2:63824618-63824637 | Msa0923390:intron | 35.0% |
| CTTCATTGCATGGTAATTGT+TGG | - | chr6_2:63824667-63824686 | Msa0923390:CDS | 35.0% | |
| ATTGCATGGTAATTGTTGGT+TGG | - | chr6_2:63824671-63824690 | Msa0923390:CDS | 35.0% | |
| GCCAATATATTCACTATAGC+TGG | + | chr6_2:63824728-63824747 | None:intergenic | 35.0% | |
| GCTATAGTGAATATATTGGC+TGG | - | chr6_2:63824728-63824747 | Msa0923390:CDS | 35.0% | |
| ACATAAGGGATTGTAAGAAC+TGG | - | chr6_2:63824753-63824772 | Msa0923390:CDS | 35.0% | |
| ATATTGTAGTCTCTGTCTCA+CGG | - | chr6_2:63824819-63824838 | Msa0923390:intron | 35.0% | |
| TTATTGTGCACACTTAGGTA+AGG | + | chr6_2:63825112-63825131 | None:intergenic | 35.0% | |
| AGATGTCATGTAGATGCATA+CGG | + | chr6_2:63825827-63825846 | None:intergenic | 35.0% | |
| AAAGAGAGACAGAAGAACAA+AGG | + | chr6_2:63825958-63825977 | None:intergenic | 35.0% | |
| ! | ACCATATAATTCATGGTGGA+AGG | - | chr6_2:63826363-63826382 | Msa0923390:CDS | 35.0% |
| TCCTTCCACCATGAATTATA+TGG | + | chr6_2:63826367-63826386 | Msa0923400:intron | 35.0% | |
| AGACGTATCCAATATGTAAG+TGG | - | chr6_2:63826386-63826405 | Msa0923390:exon | 35.0% | |
| GACGTATCCAATATGTAAGT+GGG | - | chr6_2:63826387-63826406 | Msa0923390:exon | 35.0% | |
| ACGAAAGTTACAATTTCAGG+AGG | + | chr6_2:63826583-63826602 | Msa0923400:CDS | 35.0% | |
| CAATGTTTGACAATTTCAGG+AGG | + | chr6_2:63826641-63826660 | Msa0923400:CDS | 35.0% | |
| CTCCTGAAATTGTCAAACAT+TGG | - | chr6_2:63826639-63826658 | Msa0923390:five_prime_UTR | 35.0% | |
| TAACGGTTGAAATTGACGAA+GGG | + | chr6_2:63826674-63826693 | Msa0923400:CDS | 35.0% | |
| CGTCGTATCATGTTAACTAA+CGG | + | chr6_2:63826691-63826710 | Msa0923400:CDS | 35.0% | |
| ACTAAACTTCTAGACCTCAA+AGG | + | chr6_2:63826989-63827008 | None:intergenic | 35.0% | |
| !! | GAGGTCTAGAAGTTTAGTTT+TGG | - | chr6_2:63826991-63827010 | Msa0923390:intron | 35.0% |
| GCAGTAAGTGATGAAAGATT+TGG | - | chr6_2:63827033-63827052 | Msa0923390:intron | 35.0% | |
| !!! | ATTTTTTGAATTTCCAGCCC+AGG | - | chr6_2:63827062-63827081 | Msa0923390:intron | 35.0% |
| ! | TTTTTGTCCCCCATATATCA+TGG | - | chr6_2:63827088-63827107 | Msa0923390:intron | 35.0% |
| AAGGAATGAGAATGGATCTT+GGG | - | chr6_2:63827326-63827345 | Msa0923390:five_prime_UTR | 35.0% | |
| ! | CAAAAGCTTTGATGAACTGT+TGG | - | chr6_2:63827360-63827379 | Msa0923390:five_prime_UTR | 35.0% |
| AGAGTGAGTTCCTCTAATGA+AGG | + | chr6_2:63821439-63821458 | None:intergenic | 40.0% | |
| TAAGAGTCTTTCTCCCATGT+TGG | - | chr6_2:63821477-63821496 | Msa0923390:intron | 40.0% | |
| TCCCATGTTGGATGTATCAT+TGG | - | chr6_2:63821489-63821508 | Msa0923390:intron | 40.0% | |
| TGAGAGTCTTTCTCCTATGT+TGG | - | chr6_2:63821618-63821637 | Msa0923390:intron | 40.0% | |
| AGATCGAGAACTTCCAATGA+AGG | + | chr6_2:63821721-63821740 | None:intergenic | 40.0% | |
| TGAGAGTCTTTCTCCAATGT+TGG | - | chr6_2:63821756-63821775 | Msa0923390:intron | 40.0% | |
| AGATCGAGTTCTTCCAATGA+AGG | + | chr6_2:63822000-63822019 | None:intergenic | 40.0% | |
| CATATGACTTTCTCCCATGT+TGG | - | chr6_2:63822038-63822057 | Msa0923390:intron | 40.0% | |
| AGATCGAGTTCTTCCAATGA+AGG | + | chr6_2:63822000-63822019 | None:intergenic | 40.0% | |
| TCCAATGACTCATCCAACAT+CGG | + | chr6_2:63822336-63822355 | None:intergenic | 40.0% | |
| TCTTTCTCCTATGTTGGATG+AGG | - | chr6_2:63822467-63822486 | Msa0923390:intron | 40.0% | |
| GGTGGAATAGTTTCGATCTT+TGG | + | chr6_2:63822531-63822550 | None:intergenic | 40.0% | |
| !! | TGAGAGTATTTCTGTCACGT+TGG | - | chr6_2:63822602-63822621 | Msa0923390:intron | 40.0% |
| AGTCTTTCTCCCTTGTTGAA+TGG | - | chr6_2:63822747-63822766 | Msa0923390:intron | 40.0% | |
| GTCTTTCTCCCTTGTTGAAT+GGG | - | chr6_2:63822748-63822767 | Msa0923390:intron | 40.0% | |
| TCCAATGACCCATTCAACAA+GGG | + | chr6_2:63822759-63822778 | None:intergenic | 40.0% | |
| ATCCAATGACCCATTCAACA+AGG | + | chr6_2:63822760-63822779 | None:intergenic | 40.0% | |
| AATGAAGGCAACTTGATAGG+TGG | + | chr6_2:63822831-63822850 | None:intergenic | 40.0% | |
| ! | ACCTATCAAGTTGCCTTCAT+TGG | - | chr6_2:63822830-63822849 | Msa0923390:intron | 40.0% |
| TCCAATGAAGGCAACTTGAT+AGG | + | chr6_2:63822834-63822853 | None:intergenic | 40.0% | |
| AAGTTTAGACATTGACCCCA+TGG | + | chr6_2:63822907-63822926 | None:intergenic | 40.0% | |
| GATAAGGAAAACTCCAGTTC+AGG | - | chr6_2:63822960-63822979 | Msa0923390:intron | 40.0% | |
| TCATCTAAGGATTCCTGAAC+TGG | + | chr6_2:63822976-63822995 | None:intergenic | 40.0% | |
| ! | AGTTTTCCACATCTGACTGA+TGG | - | chr6_2:63823025-63823044 | Msa0923390:intron | 40.0% |
| TATCTTCCATCAGTCAGATG+TGG | + | chr6_2:63823034-63823053 | None:intergenic | 40.0% | |
| TCTGTCTTGCACAAACTTCT+TGG | + | chr6_2:63823199-63823218 | None:intergenic | 40.0% | |
| GAGGATCAAAATCGTGATTG+AGG | + | chr6_2:63823307-63823326 | None:intergenic | 40.0% | |
| AATGCGAAGTGTGGAAGTAA+GGG | + | chr6_2:63823749-63823768 | None:intergenic | 40.0% | |
| AAATGCGAAGTGTGGAAGTA+AGG | + | chr6_2:63823750-63823769 | None:intergenic | 40.0% | |
| TGTTGATCAAATGCGAAGTG+TGG | + | chr6_2:63823758-63823777 | None:intergenic | 40.0% | |
| ! | GTTAATTGGTTTCTCGATGC+AGG | - | chr6_2:63823840-63823859 | Msa0923390:intron | 40.0% |
| CTGATACTCTAATAGCACGA+AGG | + | chr6_2:63824273-63824292 | None:intergenic | 40.0% | |
| CTTCTCAGCAATGTGAACAA+AGG | - | chr6_2:63824572-63824591 | Msa0923390:intron | 40.0% | |
| GAACAAAGGAGATGTGTGAA+AGG | - | chr6_2:63824586-63824605 | Msa0923390:intron | 40.0% | |
| ! | AGATGTGTGAAAGGCTTTTG+TGG | - | chr6_2:63824595-63824614 | Msa0923390:intron | 40.0% |
| TGGTTATGCTCTTCATTGCA+TGG | - | chr6_2:63824657-63824676 | Msa0923390:CDS | 40.0% | |
| ! | ATATATTGGCTGGGCACATA+AGG | - | chr6_2:63824738-63824757 | Msa0923390:CDS | 40.0% |
| ! | TATATTGGCTGGGCACATAA+GGG | - | chr6_2:63824739-63824758 | Msa0923390:CDS | 40.0% |
| !!! | CTGTCTCACGGTTTCTTTTT+TGG | - | chr6_2:63824831-63824850 | Msa0923390:intron | 40.0% |
| TTTGGTTACACACTCAGGTA+AGG | + | chr6_2:63825077-63825096 | None:intergenic | 40.0% | |
| GTGCATTATTGTGCACACTT+AGG | + | chr6_2:63825117-63825136 | None:intergenic | 40.0% | |
| CGACAACAGACCATTGTTTA+AGG | - | chr6_2:63825618-63825637 | Msa0923390:intron | 40.0% | |
| ! | GGTGGGTCGTTATATTTTTC+CGG | + | chr6_2:63825806-63825825 | None:intergenic | 40.0% |
| GTATCCAATATGTAAGTGGG+CGG | - | chr6_2:63826390-63826409 | Msa0923390:five_prime_UTR | 40.0% | |
| TTGCTAAAGGATCTGATAGG+TGG | + | chr6_2:63826434-63826453 | Msa0923400:CDS | 40.0% | |
| AACGGTTGAAATTGACGAAG+GGG | + | chr6_2:63826673-63826692 | Msa0923400:CDS | 40.0% | |
| CTAACGGTTGAAATTGACGA+AGG | + | chr6_2:63826675-63826694 | Msa0923400:CDS | 40.0% | |
| GAAGGAATGAGAATGGATCT+TGG | - | chr6_2:63827325-63827344 | Msa0923390:five_prime_UTR | 40.0% | |
| TCCTATGTTGGACGAGTCAT+TGG | - | chr6_2:63821630-63821649 | Msa0923390:intron | 45.0% | |
| TCCAATGACTCGTCCAACAT+AGG | + | chr6_2:63821634-63821653 | None:intergenic | 45.0% | |
| CAAGAGACTTTCTCCCATGT+TGG | - | chr6_2:63822179-63822198 | Msa0923390:intron | 45.0% | |
| TGAGAGTCTTTCTCCGATGT+TGG | - | chr6_2:63822320-63822339 | Msa0923390:intron | 45.0% | |
| TCCGATGTTGGATGAGTCAT+TGG | - | chr6_2:63822332-63822351 | Msa0923390:intron | 45.0% | |
| TCCTATGTTGGATGAGGCAT+TGG | - | chr6_2:63822473-63822492 | Msa0923390:intron | 45.0% | |
| TCCAATGCCTCATCCAACAT+AGG | + | chr6_2:63822477-63822496 | None:intergenic | 45.0% | |
| TCCCTTGTTGAATGGGTCAT+TGG | - | chr6_2:63822755-63822774 | Msa0923390:intron | 45.0% | |
| !! | TCAAGAGCACTCCCATTACT+AGG | - | chr6_2:63823064-63823083 | Msa0923390:intron | 45.0% |
| CAGAGAGGTGACATCTAGAA+AGG | + | chr6_2:63823156-63823175 | None:intergenic | 45.0% | |
| CTTTCTAGATGTCACCTCTC+TGG | - | chr6_2:63823154-63823173 | Msa0923390:intron | 45.0% | |
| ! | TCAACGTGTTTTCACCAGAG+AGG | + | chr6_2:63823171-63823190 | None:intergenic | 45.0% |
| !! | TTTTCTGGAAGGTGGGTTTG+TGG | + | chr6_2:63823353-63823372 | None:intergenic | 45.0% |
| GGTAGATGAGATGAGAACCT+TGG | - | chr6_2:63823861-63823880 | Msa0923390:intron | 45.0% | |
| TCCTTCATCATTGGTGGAAC+TGG | - | chr6_2:63823941-63823960 | Msa0923390:intron | 45.0% | |
| ACCAGTTCCACCAATGATGA+AGG | + | chr6_2:63823945-63823964 | None:intergenic | 45.0% | |
| CTTCAGCTTCTCCTATTGAG+AGG | + | chr6_2:63824144-63824163 | None:intergenic | 45.0% | |
| TGCAAGAAGGTGGTTTCTTC+TGG | - | chr6_2:63824205-63824224 | Msa0923390:intron | 45.0% | |
| ! | CTTCTGGAGACACTATGTAC+TGG | - | chr6_2:63824221-63824240 | Msa0923390:intron | 45.0% |
| ! | TGGAGACACTATGTACTGGT+GGG | - | chr6_2:63824225-63824244 | Msa0923390:intron | 45.0% |
| ! | AGTCAATGGGCAGAGGATTT+TGG | + | chr6_2:63824443-63824462 | None:intergenic | 45.0% |
| ! | AGTTTGAAGTCAATGGGCAG+AGG | + | chr6_2:63824450-63824469 | None:intergenic | 45.0% |
| GGTTACATTCTCTCGGTTAG+TGG | - | chr6_2:63824852-63824871 | Msa0923390:intron | 45.0% | |
| TGCGCATGTCAAAAGTGGAA+AGG | - | chr6_2:63825319-63825338 | Msa0923390:intron | 45.0% | |
| GCGCATGTCAAAAGTGGAAA+GGG | - | chr6_2:63825320-63825339 | Msa0923390:intron | 45.0% | |
| CGCATGTCAAAAGTGGAAAG+GGG | - | chr6_2:63825321-63825340 | Msa0923390:intron | 45.0% | |
| ACAATGGTCTGTTGTCGATG+CGG | + | chr6_2:63825615-63825634 | None:intergenic | 45.0% | |
| GTCATGTAGATGCATACGGT+GGG | + | chr6_2:63825823-63825842 | None:intergenic | 45.0% | |
| TGTCATGTAGATGCATACGG+TGG | + | chr6_2:63825824-63825843 | None:intergenic | 45.0% | |
| TACACCGCCCACTTACATAT+TGG | + | chr6_2:63826397-63826416 | Msa0923400:intron | 45.0% | |
| ACGACGTTTGACTGTCTATG+TGG | - | chr6_2:63826705-63826724 | Msa0923390:five_prime_UTR | 45.0% | |
| ATGGGGGACAAAAAGAACCT+GGG | + | chr6_2:63827082-63827101 | None:intergenic | 45.0% | |
| TATGGGGGACAAAAAGAACC+TGG | + | chr6_2:63827083-63827102 | None:intergenic | 45.0% | |
| ! | TAATGGGCATGTGCATGTGT+TGG | + | chr6_2:63827190-63827209 | None:intergenic | 45.0% |
| !!! | AAATTTAATTGATTTATTTA+TGG | - | chr6_2:63823525-63823544 | Msa0923390:intron | 5.0% |
| !!! | AATTTAATTGATTTATTTAT+GGG | - | chr6_2:63823526-63823545 | Msa0923390:intron | 5.0% |
| !!! | TTTTATTTTTTTGATAAAAA+AGG | - | chr6_2:63824930-63824949 | Msa0923390:intron | 5.0% |
| !!! | ATTTTTTTTTAAAAATAAAC+CGG | - | chr6_2:63826780-63826799 | Msa0923390:intron | 5.0% |
| TGAGAGTCTTTCTCCCATGC+TGG | - | chr6_2:63821897-63821916 | Msa0923390:intron | 50.0% | |
| TCCAATGACTCGTCCAGCAT+GGG | + | chr6_2:63821913-63821932 | None:intergenic | 50.0% | |
| ATCCAATGACTCGTCCAGCA+TGG | + | chr6_2:63821914-63821933 | None:intergenic | 50.0% | |
| TGGAAAAGACTGTGCCAGAC+TGG | - | chr6_2:63824179-63824198 | Msa0923390:intron | 50.0% | |
| ACCTTCTTGCAAAGCCAGTC+TGG | + | chr6_2:63824196-63824215 | None:intergenic | 50.0% | |
| !! | AGACTGGCTTTGCAAGAAGG+TGG | - | chr6_2:63824195-63824214 | Msa0923390:intron | 50.0% |
| CTGGAGACACTATGTACTGG+TGG | - | chr6_2:63824224-63824243 | Msa0923390:intron | 50.0% | |
| GGTCAACCCAAAAATTGGCG+CGG | + | chr6_2:63825576-63825595 | None:intergenic | 50.0% | |
| GACGCGGTCAACCCAAAAAT+TGG | + | chr6_2:63825581-63825600 | None:intergenic | 50.0% | |
| CTGTTGTCGATGCGGAAATG+AGG | + | chr6_2:63825607-63825626 | None:intergenic | 50.0% | |
| AGTGGGCGGTGTACTAATGA+AGG | - | chr6_2:63826404-63826423 | Msa0923390:five_prime_UTR | 50.0% | |
| ACGTGTCATGCCACATCACA+AGG | - | chr6_2:63826744-63826763 | Msa0923390:five_prime_UTR | 50.0% | |
| CGTGTCATGCCACATCACAA+GGG | - | chr6_2:63826745-63826764 | Msa0923390:five_prime_UTR | 50.0% | |
| TGGGCAAGGGCCAACAAATA+AGG | + | chr6_2:63826921-63826940 | None:intergenic | 50.0% | |
| TCCCATGCTGGACGAGTCAT+TGG | - | chr6_2:63821909-63821928 | Msa0923390:intron | 55.0% | |
| !! | GCCAGACTGGCTTTGCAAGA+AGG | - | chr6_2:63824192-63824211 | Msa0923390:intron | 55.0% |
| ! | CTTTTGACATGCGCAGACGC+AGG | + | chr6_2:63825314-63825333 | None:intergenic | 55.0% |
| GCGTCTGCGCATGTCAAAAG+TGG | - | chr6_2:63825314-63825333 | Msa0923390:intron | 55.0% | |
| ACCCAAAAATTGGCGCGGTG+CGG | + | chr6_2:63825571-63825590 | None:intergenic | 55.0% | |
| GGGACAAAAAGAACCTGGGC+TGG | + | chr6_2:63827078-63827097 | None:intergenic | 55.0% | |
| AAATTGGCGCGGTGCGGGAA+CGG | + | chr6_2:63825565-63825584 | None:intergenic | 60.0% | |
| ! | TCCCGCACCGCGCCAATTTT+TGG | - | chr6_2:63825566-63825585 | Msa0923390:intron | 60.0% |
| CCCAAAAATTGGCGCGGTGC+GGG | + | chr6_2:63825570-63825589 | None:intergenic | 60.0% | |
| ! | CCCGCACCGCGCCAATTTTT+GGG | - | chr6_2:63825567-63825586 | Msa0923390:intron | 60.0% |
| GGCATGACACGTCAGACACG+TGG | + | chr6_2:63826736-63826755 | Msa0923400:CDS | 60.0% | |
| TGACATGCGCAGACGCAGGC+TGG | + | chr6_2:63825310-63825329 | None:intergenic | 65.0% | |
| !! | GGTAGCGGGCGCTAGTTTGG+TGG | + | chr6_2:63825538-63825557 | None:intergenic | 65.0% |
| !! | ACGGGTAGCGGGCGCTAGTT+TGG | + | chr6_2:63825541-63825560 | None:intergenic | 65.0% |
| AATTGGCGCGGTGCGGGAAC+GGG | + | chr6_2:63825564-63825583 | None:intergenic | 65.0% | |
| TGCGGAAATGAGGCGCGACG+CGG | + | chr6_2:63825597-63825616 | None:intergenic | 65.0% | |
| TGCGGGAACGGGACGGGTAG+CGG | + | chr6_2:63825553-63825572 | None:intergenic | 70.0% | |
| GCGGGAACGGGACGGGTAGC+GGG | + | chr6_2:63825552-63825571 | None:intergenic | 75.0% | |
| ! | GCGCGGTGCGGGAACGGGAC+GGG | + | chr6_2:63825559-63825578 | None:intergenic | 80.0% |
| ! | GGCGCGGTGCGGGAACGGGA+CGG | + | chr6_2:63825560-63825579 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_2 | gene | 63821338 | 63827387 | 63821338 | ID=Msa0923390;Name=Msa0923390 |
| chr6_2 | mRNA | 63821338 | 63827387 | 63821338 | ID=Msa0923390-mRNA-1;Parent=Msa0923390;Name=Msa0923390-mRNA-1;_AED=0.36;_eAED=0.36;_QI=578|0.28|0.25|0.75|0.42|0.5|8|0|230 |
| chr6_2 | exon | 63821338 | 63821418 | 63821338 | ID=Msa0923390-mRNA-1:exon:9952;Parent=Msa0923390-mRNA-1 |
| chr6_2 | exon | 63824086 | 63824193 | 63824086 | ID=Msa0923390-mRNA-1:exon:9951;Parent=Msa0923390-mRNA-1 |
| chr6_2 | exon | 63824479 | 63824573 | 63824479 | ID=Msa0923390-mRNA-1:exon:9950;Parent=Msa0923390-mRNA-1 |
| chr6_2 | exon | 63824657 | 63824815 | 63824657 | ID=Msa0923390-mRNA-1:exon:9949;Parent=Msa0923390-mRNA-1 |
| chr6_2 | exon | 63824864 | 63824916 | 63824864 | ID=Msa0923390-mRNA-1:exon:9948;Parent=Msa0923390-mRNA-1 |
| chr6_2 | exon | 63825227 | 63825328 | 63825227 | ID=Msa0923390-mRNA-1:exon:9947;Parent=Msa0923390-mRNA-1 |
| chr6_2 | exon | 63826295 | 63826773 | 63826295 | ID=Msa0923390-mRNA-1:exon:9946;Parent=Msa0923390-mRNA-1 |
| chr6_2 | exon | 63827194 | 63827387 | 63827194 | ID=Msa0923390-mRNA-1:exon:9945;Parent=Msa0923390-mRNA-1 |
| chr6_2 | five_prime_UTR | 63827194 | 63827387 | 63827194 | ID=Msa0923390-mRNA-1:five_prime_utr;Parent=Msa0923390-mRNA-1 |
| chr6_2 | five_prime_UTR | 63826390 | 63826773 | 63826390 | ID=Msa0923390-mRNA-1:five_prime_utr;Parent=Msa0923390-mRNA-1 |
| chr6_2 | CDS | 63826295 | 63826389 | 63826295 | ID=Msa0923390-mRNA-1:cds;Parent=Msa0923390-mRNA-1 |
| chr6_2 | CDS | 63825227 | 63825328 | 63825227 | ID=Msa0923390-mRNA-1:cds;Parent=Msa0923390-mRNA-1 |
| chr6_2 | CDS | 63824864 | 63824916 | 63824864 | ID=Msa0923390-mRNA-1:cds;Parent=Msa0923390-mRNA-1 |
| chr6_2 | CDS | 63824657 | 63824815 | 63824657 | ID=Msa0923390-mRNA-1:cds;Parent=Msa0923390-mRNA-1 |
| chr6_2 | CDS | 63824479 | 63824573 | 63824479 | ID=Msa0923390-mRNA-1:cds;Parent=Msa0923390-mRNA-1 |
| chr6_2 | CDS | 63824086 | 63824193 | 63824086 | ID=Msa0923390-mRNA-1:cds;Parent=Msa0923390-mRNA-1 |
| chr6_2 | CDS | 63821338 | 63821418 | 63821338 | ID=Msa0923390-mRNA-1:cds;Parent=Msa0923390-mRNA-1 |
| Gene Sequence |
| Protein sequence |
