AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1313280

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1313280 MtrunA17_Chr8g0341861 97.714 175 4 0 1 175 1 175 1.02e-120 350
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 166 sgRNAs with CRISPR-Local

Find 460 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCACCAACTGTTCCCCTTTC+AGG 0.122294 8_4:-11160829 None:intergenic
CAACTGTTTATTATATTTAA+TGG 0.131610 8_4:+11164659 Msa1313280:three_prime_UTR
AAGAAACAGAATTTGAAATT+TGG 0.144508 8_4:+11163817 Msa1313280:three_prime_UTR
ATATATAAATATACAATAAT+AGG 0.165485 8_4:-11164739 None:intergenic
ATTTGGCCTATTCACTATTA+TGG 0.187662 8_4:+11166529 Msa1313280:three_prime_UTR
GATTATTCAGTTACAGATTT+TGG 0.191219 8_4:+11167367 Msa1313280:three_prime_UTR
TCAGAGAGTTGTAGCTTTAA+AGG 0.193111 8_4:+11160451 Msa1313280:CDS
TAACAAAAGATTCAGATTAA+AGG 0.199333 8_4:+11164000 Msa1313280:three_prime_UTR
TGGTGATGGAAGGGTGATTT+TGG 0.207922 8_4:+11160570 Msa1313280:CDS
ACTTTGGATATGAAATTATT+TGG 0.222214 8_4:-11166827 None:intergenic
TTGACAACTTTGAAGGGTTT+TGG 0.234488 8_4:-11164408 None:intergenic
CTCCTCAAGAATAACATATT+TGG 0.237086 8_4:-11166764 None:intergenic
AGAAACAGAATTTGAAATTT+GGG 0.241265 8_4:+11163818 Msa1313280:three_prime_UTR
TCGTGTAAGATCTGCATTAT+TGG 0.248291 8_4:+11164202 Msa1313280:three_prime_UTR
ATGCTTGCTGCTGTTATGTC+TGG 0.276795 8_4:+11163855 Msa1313280:three_prime_UTR
ATTATTGTTGGGAGCGTATC+TGG 0.277369 8_4:+11163941 Msa1313280:three_prime_UTR
AGTACTATATATCTATATTT+AGG 0.287574 8_4:-11164260 None:intergenic
AGTTTCTTGCTGATGTTCTT+TGG 0.296937 8_4:+11166053 Msa1313280:three_prime_UTR
TTTACTTGGTTGAAAGGATT+TGG 0.305186 8_4:+11166512 Msa1313280:three_prime_UTR
GGTGGTGACTCGTATGATTC+GGG 0.312778 8_4:+11160847 Msa1313280:CDS
TTTCTCTTGCATTAGATCCT+TGG 0.319284 8_4:+11165979 Msa1313280:three_prime_UTR
ATGAGTACTTTGATAGTTCA+TGG 0.322932 8_4:+11166018 Msa1313280:three_prime_UTR
TTCTCTTGCATTAGATCCTT+GGG 0.329763 8_4:+11165980 Msa1313280:three_prime_UTR
ATATATCTATATTTAGGAAT+TGG 0.331421 8_4:-11164254 None:intergenic
TTTCAGAAGGGGAGGAAGAT+AGG 0.332254 8_4:-11164120 None:intergenic
TGGACGATGATTCTGTTTAT+AGG 0.334225 8_4:+11160758 Msa1313280:CDS
TATATGTTGTAGATCATAAT+AGG 0.345789 8_4:+11167411 Msa1313280:three_prime_UTR
GCGGTTGCCACAGCCATTAC+TGG 0.348920 8_4:-11165951 None:intergenic
GAGCATTGGCGTTGATGATA+TGG 0.349849 8_4:-11167321 None:intergenic
TTTCTTACCAATACAGTGAT+TGG 0.360244 8_4:+11167520 Msa1313280:three_prime_UTR
GAGGAAGAATTGAGCGGAGG+AGG 0.363180 8_4:-11164047 None:intergenic
GGTAAAAGTGGAGAACAATT+TGG 0.367119 8_4:+11164594 Msa1313280:three_prime_UTR
CAATCATGTTTCTCATTTGT+CGG 0.367185 8_4:-11164363 None:intergenic
CAGAGAGTTGTAGCTTTAAA+GGG 0.368349 8_4:+11160452 Msa1313280:CDS
TGAAATTATTTGGTCCATAT+AGG 0.374264 8_4:-11166817 None:intergenic
TGTCACCTGCATGAAGCTTC+TGG 0.376676 8_4:-11166708 None:intergenic
ACAGTTGTCCCGACTGCTCT+TGG 0.379237 8_4:+11161995 Msa1313280:three_prime_UTR
GGGGAGGAAGATAGGGTTGA+TGG 0.381322 8_4:-11164112 None:intergenic
TTCAGAAGGGGAGGAAGATA+GGG 0.386770 8_4:-11164119 None:intergenic
TGGTGGTGACTCGTATGATT+CGG 0.389772 8_4:+11160846 Msa1313280:CDS
ACTAGGCTACCTGTGAAGTA+TGG 0.393809 8_4:-11164230 None:intergenic
AAAGTTAATTGATACCAATA+TGG 0.397508 8_4:-11166317 None:intergenic
GAAGTTCAGGATCCGGTATT+CGG 0.399782 8_4:+11160500 Msa1313280:CDS
AGGAGGTAAAAGAGGGTAAG+AGG 0.400064 8_4:-11164066 None:intergenic
GGATACAATACAAGTTTGTT+TGG 0.401116 8_4:-11167627 None:intergenic
TATATAAATATACAATAATA+GGG 0.403995 8_4:-11164738 None:intergenic
TTTGAGAATGTAAGGGGAGG+GGG 0.405520 8_4:-11167656 None:intergenic
GTGGCATCTGAAAACCTATA+TGG 0.411109 8_4:+11166803 Msa1313280:three_prime_UTR
CACAATAGCAGGGGTTGTTA+AGG 0.412687 8_4:+11166285 Msa1313280:three_prime_UTR
ACAAGTTTGTTTGGTGTTGA+AGG 0.413238 8_4:-11167618 None:intergenic
GCAAACAAGAGGAGAAAGAT+TGG 0.417679 8_4:-11162251 None:intergenic
GGCCTATTCACTATTATGGT+TGG 0.420950 8_4:+11166533 Msa1313280:three_prime_UTR
TCACATTCACTTCTATGCTT+CGG 0.422056 8_4:-11164568 None:intergenic
TGCTTGCTGCTGTTATGTCT+GGG 0.429245 8_4:+11163856 Msa1313280:three_prime_UTR
CTCTGTCACATTTGCTACAA+TGG 0.434598 8_4:+11162063 Msa1313280:three_prime_UTR
AAAATTACATTGTAAATGTA+AGG 0.440290 8_4:-11164470 None:intergenic
TCTGTTTATAGGAGAGGTAA+TGG 0.441718 8_4:+11160769 Msa1313280:CDS
TTCTTGCTGATGTTCTTTGG+TGG 0.442105 8_4:+11166056 Msa1313280:three_prime_UTR
CTGTTATGTCTGGGTTTCGC+TGG 0.446264 8_4:+11163865 Msa1313280:three_prime_UTR
TAAGGAGGCCGTCACCATAT+TGG 0.448702 8_4:+11166303 Msa1313280:three_prime_UTR
ACCAATACAGTGATTGGTAA+TGG 0.453845 8_4:+11167526 Msa1313280:three_prime_UTR
ACTTTCATGATGCGTTTACT+TGG 0.454790 8_4:+11166498 Msa1313280:three_prime_UTR
CGAAAGCTCTCTCCGAATAC+CGG 0.456403 8_4:-11160512 None:intergenic
GCCGTCACAGTCACAATAGC+AGG 0.457610 8_4:+11166274 Msa1313280:three_prime_UTR
TTTGTGTGTGTATGTGTAGA+TGG 0.461936 8_4:-11164768 None:intergenic
GCACAACACAGTGTGCAGTT+TGG 0.466555 8_4:-11164177 None:intergenic
GATGCGTTTACTTGGTTGAA+AGG 0.473291 8_4:+11166506 Msa1313280:three_prime_UTR
ATTCCTGATAGTTTAAAACT+TGG 0.475966 8_4:-11162904 None:intergenic
GTCTTCAATATATTTGCTAC+AGG 0.478820 8_4:-11160913 None:intergenic
GATAGTGGAAGTTCAGGATC+CGG 0.479106 8_4:+11160493 Msa1313280:CDS
CACCAACCATAATAGTGAAT+AGG 0.480731 8_4:-11166535 None:intergenic
TGAATGTGAAAAGGTAAAAG+TGG 0.482408 8_4:+11164582 Msa1313280:three_prime_UTR
TATATTTAGGAATTGGAACT+AGG 0.484248 8_4:-11164247 None:intergenic
ATGTAGGAAGGAGGTAAAAG+AGG 0.486189 8_4:-11164074 None:intergenic
GGTCAATTTCGTTGTTACAT+TGG 0.486992 8_4:+11167588 Msa1313280:three_prime_UTR
TATTGAAGACAGTCCTGAAA+GGG 0.489450 8_4:+11160816 Msa1313280:CDS
AAAATGCATCTAAAATATAG+TGG 0.490040 8_4:-11167494 None:intergenic
ACCATTACCAATCACTGTAT+TGG 0.491682 8_4:-11167527 None:intergenic
AGTCAAGAGATGATGTAGGA+AGG 0.500937 8_4:-11164086 None:intergenic
ACCGTGTTTGACAACTTTGA+AGG 0.502314 8_4:-11164415 None:intergenic
GAAACAGAATTTGAAATTTG+GGG 0.502876 8_4:+11163819 Msa1313280:three_prime_UTR
AATGTTCAGTTAGCGATAGC+AGG 0.503802 8_4:-11164813 None:intergenic
GATGAGTCAAGAGATGATGT+AGG 0.503818 8_4:-11164090 None:intergenic
AGATCATCATACAAAAGATT+CGG 0.504216 8_4:+11166738 Msa1313280:three_prime_UTR
GAAAGGATCGTGCCGATGAA+TGG 0.505519 8_4:+11160724 Msa1313280:CDS
TTGAGAATGTAAGGGGAGGG+GGG 0.505958 8_4:-11167655 None:intergenic
ACTTCTATGCTTCGGCCTCA+AGG 0.506147 8_4:-11164560 None:intergenic
CCTGAAAGGGGAACAGTTGG+TGG 0.506734 8_4:+11160829 Msa1313280:CDS
ATATGTTATTCTTGAGGAGA+TGG 0.508928 8_4:+11166768 Msa1313280:three_prime_UTR
TTGATAAGTTTCGGAAGGAA+AGG 0.517003 8_4:+11160707 Msa1313280:CDS
ACATAGCTCATCAAGGTAAG+TGG 0.518542 8_4:-11165924 None:intergenic
GGACTGTCTTCAATATCAAA+AGG 0.520338 8_4:-11160808 None:intergenic
TTCGGCCTCAAGGTTGTAGC+CGG 0.523367 8_4:-11164550 None:intergenic
CCGTGTTTGACAACTTTGAA+GGG 0.525410 8_4:-11164414 None:intergenic
GCATAGAAGTGAATGTGAAA+AGG 0.526950 8_4:+11164573 Msa1313280:three_prime_UTR
TAAATATAGATATATAGTAC+TGG 0.527570 8_4:+11164262 Msa1313280:three_prime_UTR
ACAATAATAGGGATCGTATC+CGG 0.528668 8_4:-11164727 None:intergenic
GACTGCTCTTGGAACAGCTA+TGG 0.528783 8_4:+11162006 Msa1313280:three_prime_UTR
GCATATATAATACCTGCAAA+AGG 0.531461 8_4:-11163902 None:intergenic
CAAGAGATGATGTAGGAAGG+AGG 0.533092 8_4:-11164083 None:intergenic
GGATCAGAAATTAGGTGATG+AGG 0.534429 8_4:+11160591 Msa1313280:CDS
CAACACAGTGTGCAGTTTGG+CGG 0.540395 8_4:-11164174 None:intergenic
AATAATATAAGAAAATGAAA+AGG 0.542918 8_4:-11163924 None:intergenic
ATATGGCTAAGGCAAGTCCC+TGG 0.544792 8_4:-11167304 None:intergenic
TCCATCGGCATATTACTGAC+AGG 0.547715 8_4:+11162940 Msa1313280:three_prime_UTR
GAACAAAGCGATTAAACTGT+AGG 0.548352 8_4:-11164305 None:intergenic
TGTAGGAAGGAGGTAAAAGA+GGG 0.550336 8_4:-11164073 None:intergenic
AGCCAAATATGTTATTCTTG+AGG 0.551577 8_4:+11166762 Msa1313280:three_prime_UTR
ATTGAAAAGAAAGAATCCTA+TGG 0.555348 8_4:+11164900 Msa1313280:three_prime_UTR
AGTGGAGAACAATTTGGTGG+AGG 0.555552 8_4:+11164600 Msa1313280:three_prime_UTR
AGGAAGAATTGAGCGGAGGA+GGG 0.555907 8_4:-11164046 None:intergenic
GATGATAATGATGGTGGTGA+TGG 0.556719 8_4:+11160556 Msa1313280:CDS
GTGGAGAACAATTTGGTGGA+GGG 0.560757 8_4:+11164601 Msa1313280:three_prime_UTR
CCCTTCAAAGTTGTCAAACA+CGG 0.562020 8_4:+11164414 Msa1313280:three_prime_UTR
GCAGTCGGGACAACTGTGAA+AGG 0.567917 8_4:-11161989 None:intergenic
AAGCAATGATTTCGAAGAAG+AGG 0.568201 8_4:+11167265 Msa1313280:three_prime_UTR
AATAGCAGGGGTTGTTAAGG+AGG 0.572240 8_4:+11166288 Msa1313280:three_prime_UTR
ATCGTACTAGCACCATTCAT+CGG 0.574131 8_4:-11160736 None:intergenic
ATAATGATGGTGGTGATGGA+AGG 0.581801 8_4:+11160560 Msa1313280:CDS
ATATTGAAGACAGTCCTGAA+AGG 0.583185 8_4:+11160815 Msa1313280:CDS
TGGCGTTGATGATATGGCTA+AGG 0.583630 8_4:-11167315 None:intergenic
AGATACCAGAAGCTTCATGC+AGG 0.583657 8_4:+11166703 Msa1313280:intron
TAAGAGGAAGAATTGAGCGG+AGG 0.583756 8_4:-11164050 None:intergenic
GGTTTGAATTGGAAGGTTGG+AGG 0.584315 8_4:+11162879 Msa1313280:intron
TTGGACCGTCCATACTTCAC+AGG 0.586362 8_4:+11164221 Msa1313280:three_prime_UTR
TTGTTGATCCATAAGAAACA+AGG 0.586605 8_4:+11164437 Msa1313280:three_prime_UTR
TAGCTGTTCCAAGAGCAGTC+GGG 0.589209 8_4:-11162003 None:intergenic
ACCTGTCAGTAATATGCCGA+TGG 0.590074 8_4:-11162941 None:intergenic
ATAGCTGTTCCAAGAGCAGT+CGG 0.592561 8_4:-11162004 None:intergenic
AGTCCTGAAAGGGGAACAGT+TGG 0.594658 8_4:+11160826 Msa1313280:CDS
TGGAGCTACATAGCTCATCA+AGG 0.595512 8_4:-11165931 None:intergenic
GATGATTCTGTTTATAGGAG+AGG 0.598444 8_4:+11160763 Msa1313280:CDS
GTGGTGACTCGTATGATTCG+GGG 0.601391 8_4:+11160848 Msa1313280:CDS
AGCAATGATTTCGAAGAAGA+GGG 0.603074 8_4:+11167266 Msa1313280:three_prime_UTR
AAAAGTGGAGAACAATTTGG+TGG 0.607879 8_4:+11164597 Msa1313280:three_prime_UTR
CCGTCACAGTCACAATAGCA+GGG 0.608410 8_4:+11166275 Msa1313280:three_prime_UTR
GGAAAGCAAAAGCAAACAAG+AGG 0.608751 8_4:-11162262 None:intergenic
GGGTAAGAGGAAGAATTGAG+CGG 0.613826 8_4:-11164053 None:intergenic
TGGTGACTCGTATGATTCGG+GGG 0.616100 8_4:+11160849 Msa1313280:CDS
GGCTACCTGTGAAGTATGGA+CGG 0.616357 8_4:-11164226 None:intergenic
AATTGATACCAATATGGTGA+CGG 0.618158 8_4:-11166311 None:intergenic
GTTGAAAAGAATGTGGTGCA+AGG 0.620880 8_4:+11160655 Msa1313280:CDS
TAATGATGGTGGTGATGGAA+GGG 0.620916 8_4:+11160561 Msa1313280:CDS
GATGAATGGTGCTAGTACGA+TGG 0.623958 8_4:+11160738 Msa1313280:CDS
TGGAGAACAATTTGGTGGAG+GGG 0.626348 8_4:+11164602 Msa1313280:three_prime_UTR
TGTAGCTCCAGTAATGGCTG+TGG 0.626348 8_4:+11165944 Msa1313280:three_prime_UTR
GACAGAATAGAAGAGAGCAT+TGG 0.631652 8_4:-11167335 None:intergenic
TGTTGATCCATAAGAAACAA+GGG 0.638024 8_4:+11164438 Msa1313280:three_prime_UTR
GAGCTATGTAGCTCCAGTAA+TGG 0.650395 8_4:+11165938 Msa1313280:three_prime_UTR
ATTGAAGACAGTCCTGAAAG+GGG 0.665406 8_4:+11160817 Msa1313280:CDS
CCCTGCTATTGTGACTGTGA+CGG 0.667298 8_4:-11166275 None:intergenic
CAATAAATAAGAGTTCTCAC+CGG 0.670931 8_4:+11164708 Msa1313280:three_prime_UTR
GTTGATCCATAAGAAACAAG+GGG 0.676845 8_4:+11164439 Msa1313280:three_prime_UTR
CGTCACAGTCACAATAGCAG+GGG 0.682759 8_4:+11166276 Msa1313280:three_prime_UTR
GCTTCATGCAGGTGACAATG+TGG 0.684466 8_4:+11166714 Msa1313280:three_prime_UTR
GCTATGTTTAACGGTGACGC+CGG 0.687645 8_4:+11164531 Msa1313280:three_prime_UTR
GAGGAGATGGATGAACAAGA+TGG 0.689009 8_4:+11166781 Msa1313280:three_prime_UTR
TGACGCCGGCTACAACCTTG+AGG 0.693977 8_4:+11164545 Msa1313280:three_prime_UTR
TGTGACGACGATGATAATGA+TGG 0.708588 8_4:+11160547 Msa1313280:CDS
AATAATGCAGATCTTACACG+AGG 0.710389 8_4:-11164200 None:intergenic
GGTGACTCGTATGATTCGGG+GGG 0.712537 8_4:+11160850 Msa1313280:CDS
GAGATGGATGAACAAGATGG+TGG 0.719797 8_4:+11166784 Msa1313280:three_prime_UTR
TTGATCCATAAGAAACAAGG+GGG 0.726217 8_4:+11164440 Msa1313280:three_prime_UTR
GACGACGATGATAATGATGG+TGG 0.757338 8_4:+11160550 Msa1313280:CDS
TAATGCAAGAGAAAGAAGTG+CGG 0.763184 8_4:-11165970 None:intergenic
ATAATGCAGATCTTACACGA+GGG 0.785253 8_4:-11164199 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATATATATATATATATA+GGG - chr8_4:11165146-11165165 None:intergenic 0.0%
!! ATATATATATATATATATAT+AGG - chr8_4:11165147-11165166 None:intergenic 0.0%
!!! ATTAAACATTCTAAAATTTA+AGG + chr8_4:11162347-11162366 Msa1313280:intron 10.0%
!! AATAATATAAGAAAATGAAA+AGG - chr8_4:11163927-11163946 None:intergenic 10.0%
!!! ATATTTTATATATTCATTTG+TGG + chr8_4:11166894-11166913 Msa1313280:intron 10.0%
!! AGAAAAATAAATAAAATTTG+GGG - chr8_4:11167686-11167705 None:intergenic 10.0%
!! CAGAAAAATAAATAAAATTT+GGG - chr8_4:11167687-11167706 None:intergenic 10.0%
!!! ATATGAAATGTTTTAACAAT+AGG + chr8_4:11161807-11161826 Msa1313280:intron 15.0%
!!! TGTCATTTAATTATAAATGT+TGG + chr8_4:11162858-11162877 Msa1313280:intron 15.0%
!! TGAAATGATAAATAATACTA+TGG - chr8_4:11162988-11163007 None:intergenic 15.0%
!!! TATTTTTCTTTCCTAAATTA+AGG + chr8_4:11163140-11163159 Msa1313280:intron 15.0%
!! TTAAAATATCAACTTTACAT+CGG + chr8_4:11163245-11163264 Msa1313280:intron 15.0%
!! TTTATACTAACAAATTAGTA+TGG + chr8_4:11163512-11163531 Msa1313280:intron 15.0%
!!! TCATTTTCTTATATTATTGT+TGG + chr8_4:11163929-11163948 Msa1313280:three_prime_UTR 15.0%
!!! CATTTTCTTATATTATTGTT+GGG + chr8_4:11163930-11163949 Msa1313280:three_prime_UTR 15.0%
!! ATATATCTATATTTAGGAAT+TGG - chr8_4:11164257-11164276 None:intergenic 15.0%
!! AGTACTATATATCTATATTT+AGG - chr8_4:11164263-11164282 None:intergenic 15.0%
!! TAAATATAGATATATAGTAC+TGG + chr8_4:11164262-11164281 Msa1313280:three_prime_UTR 15.0%
!! AAAATTACATTGTAAATGTA+AGG - chr8_4:11164473-11164492 None:intergenic 15.0%
!! CAACTGTTTATTATATTTAA+TGG + chr8_4:11164659-11164678 Msa1313280:three_prime_UTR 15.0%
!! AGTTTATTTATTGAAAACAT+TGG + chr8_4:11164944-11164963 Msa1313280:intron 15.0%
!! TATAATTAATGTTCGATTTA+AGG - chr8_4:11165263-11165282 None:intergenic 15.0%
!!! TCTACATTTTTTTATATGAT+TGG + chr8_4:11166347-11166366 Msa1313280:intron 15.0%
!! TAAAATCATATTAATGATGA+AGG + chr8_4:11166940-11166959 Msa1313280:intron 15.0%
!!! GATTTTCTTTTGATAAGTTT+CGG + chr8_4:11160698-11160717 Msa1313280:CDS 20.0%
!!! GTTTTAGTTGGAATTTATAT+TGG + chr8_4:11161008-11161027 Msa1313280:intron 20.0%
!! TGGATAGTATTCATTAAAAA+GGG - chr8_4:11161347-11161366 None:intergenic 20.0%
!! AAATTTATGAGACCAAAAAT+AGG - chr8_4:11161405-11161424 None:intergenic 20.0%
!!! TGTAACTTCATAATACATTT+TGG + chr8_4:11161541-11161560 Msa1313280:intron 20.0%
!! ACAGAATTACAAATTATATG+CGG - chr8_4:11161623-11161642 None:intergenic 20.0%
!! GATTACAAAAACAAAATGAA+AGG - chr8_4:11162297-11162316 None:intergenic 20.0%
!!! AATTTCTGATATAGTCTTTT+AGG - chr8_4:11162582-11162601 None:intergenic 20.0%
!! TTCTTGAATAATCATATGTT+TGG + chr8_4:11162787-11162806 Msa1313280:intron 20.0%
!!! TTATAAATGTTGGTTTGAAT+TGG + chr8_4:11162868-11162887 Msa1313280:intron 20.0%
!!! TTTTGTAGTTTCCTTAATTT+AGG - chr8_4:11163154-11163173 None:intergenic 20.0%
!! TATTCGTCTATCAATTATAA+TGG + chr8_4:11163600-11163619 Msa1313280:intron 20.0%
!!! TTGGTTTTTCTATAAATGAT+TGG + chr8_4:11163623-11163642 Msa1313280:intron 20.0%
!!! TTAGTTTTGAATTATTGTTG+AGG - chr8_4:11163761-11163780 None:intergenic 20.0%
!!! TAATGTCTTCAAGTTTATTT+TGG + chr8_4:11163778-11163797 Msa1313280:intron 20.0%
!!! AAGAAACAGAATTTGAAATT+TGG + chr8_4:11163817-11163836 Msa1313280:three_prime_UTR 20.0%
!!! AGAAACAGAATTTGAAATTT+GGG + chr8_4:11163818-11163837 Msa1313280:three_prime_UTR 20.0%
!! TAACAAAAGATTCAGATTAA+AGG + chr8_4:11164000-11164019 Msa1313280:three_prime_UTR 20.0%
!!! TATTTAATTTTTACCAGTCA+TGG + chr8_4:11165289-11165308 Msa1313280:intron 20.0%
!!! TATTGACAATGATTTCTTTT+CGG - chr8_4:11165379-11165398 None:intergenic 20.0%
!!! TCTACAATATTTTTCACATT+AGG - chr8_4:11165502-11165521 None:intergenic 20.0%
!!! ATTGAACTTATAATTTTCCT+TGG - chr8_4:11165634-11165653 None:intergenic 20.0%
!! TATAAGTTCAATCATTATGA+AGG + chr8_4:11165642-11165661 Msa1313280:intron 20.0%
!! AGTCAAATATATATATCAGA+GGG - chr8_4:11166116-11166135 None:intergenic 20.0%
!! AAGTCAAATATATATATCAG+AGG - chr8_4:11166117-11166136 None:intergenic 20.0%
!! AAAGTTAATTGATACCAATA+TGG - chr8_4:11166320-11166339 None:intergenic 20.0%
!! ACTTTGGATATGAAATTATT+TGG - chr8_4:11166830-11166849 None:intergenic 20.0%
!!! ATTATTTGAGACATGAATAT+TGG + chr8_4:11167108-11167127 Msa1313280:intron 20.0%
!! TATATGTTGTAGATCATAAT+AGG + chr8_4:11167411-11167430 Msa1313280:three_prime_UTR 20.0%
!!! AAAATGCATCTAAAATATAG+TGG - chr8_4:11167497-11167516 None:intergenic 20.0%
!!! TTACTCAACAACTATATTTT+TGG + chr8_4:11167549-11167568 Msa1313280:three_prime_UTR 20.0%
!!! TACTCAACAACTATATTTTT+GGG + chr8_4:11167550-11167569 Msa1313280:three_prime_UTR 20.0%
!! CTATGTTTTTCATATTTGTG+TGG + chr8_4:11160935-11160954 Msa1313280:CDS 25.0%
!!! GAGTTTAATTTTGATACACT+CGG + chr8_4:11161030-11161049 Msa1313280:intron 25.0%
! TGATGTTTACGATTTATTGA+TGG + chr8_4:11161149-11161168 Msa1313280:intron 25.0%
! ATCACAAACAACACTAAAAA+GGG - chr8_4:11161230-11161249 None:intergenic 25.0%
!!! ATCGTTATATGTTTTGAAAC+AGG + chr8_4:11161276-11161295 Msa1313280:intron 25.0%
! AGGTATAATAAAAGTCTGTT+GGG + chr8_4:11161296-11161315 Msa1313280:intron 25.0%
! GTGGATAGTATTCATTAAAA+AGG - chr8_4:11161348-11161367 None:intergenic 25.0%
!! CGAAATTTATCACCTATTTT+TGG + chr8_4:11161390-11161409 Msa1313280:intron 25.0%
!!! TGGTATTCTATGTTTTAACT+TGG + chr8_4:11161482-11161501 Msa1313280:intron 25.0%
!! GCATATAATTTGTAATTCTG+TGG + chr8_4:11161622-11161641 Msa1313280:intron 25.0%
! ATTAAGATTCTAATGTTACG+TGG + chr8_4:11161695-11161714 Msa1313280:intron 25.0%
!!! TGTTTTAACAATAGGTTGAT+TGG + chr8_4:11161815-11161834 Msa1313280:intron 25.0%
!! GTTAGTTGTTTCCTTAAAAA+TGG - chr8_4:11162175-11162194 None:intergenic 25.0%
! AAAGGAAAGGTAAATAAAGA+GGG - chr8_4:11162206-11162225 None:intergenic 25.0%
! AAAAGGAAAGGTAAATAAAG+AGG - chr8_4:11162207-11162226 None:intergenic 25.0%
! GATTTACACTGCAAAATAAA+AGG - chr8_4:11162224-11162243 None:intergenic 25.0%
!! ATTCCTGATAGTTTAAAACT+TGG - chr8_4:11162907-11162926 None:intergenic 25.0%
! TAACTTTCTTACTACTGTAA+GGG - chr8_4:11163327-11163346 None:intergenic 25.0%
! ATAACTTTCTTACTACTGTA+AGG - chr8_4:11163328-11163347 None:intergenic 25.0%
! TTTCTATAAATGATTGGAAC+AGG + chr8_4:11163629-11163648 Msa1313280:intron 25.0%
! TTCTATAAATGATTGGAACA+GGG + chr8_4:11163630-11163649 Msa1313280:intron 25.0%
!! GAAACAGAATTTGAAATTTG+GGG + chr8_4:11163819-11163838 Msa1313280:three_prime_UTR 25.0%
!!! ATTCAGATTAAAGGTTTTGT+TGG + chr8_4:11164009-11164028 Msa1313280:three_prime_UTR 25.0%
!!! ACAATTTGCATTTTTCAGAA+GGG - chr8_4:11164135-11164154 None:intergenic 25.0%
! TATATTTAGGAATTGGAACT+AGG - chr8_4:11164250-11164269 None:intergenic 25.0%
!!! GTTTTGGGATTTTAATTTGT+TGG - chr8_4:11164395-11164414 None:intergenic 25.0%
!! AGGATTCTTTCTTTTCAATT+TGG - chr8_4:11164899-11164918 None:intergenic 25.0%
! ATTGAAAAGAAAGAATCCTA+TGG + chr8_4:11164900-11164919 Msa1313280:three_prime_UTR 25.0%
! AATAAACTATTACATGTGCA+AGG - chr8_4:11164932-11164951 None:intergenic 25.0%
! GGTATTGTTAGATTTAGATT+AGG + chr8_4:11164965-11164984 Msa1313280:intron 25.0%
! AGCAAGTTATAACTAAAAAG+TGG + chr8_4:11165058-11165077 Msa1313280:intron 25.0%
! AATACTCAATATCTGTTAAG+AGG + chr8_4:11165598-11165617 Msa1313280:intron 25.0%
! TCAATCATTATGAAGGATTT+AGG + chr8_4:11165649-11165668 Msa1313280:intron 25.0%
!!! TATCAAAGTACTCATTTTCT+CGG - chr8_4:11166013-11166032 None:intergenic 25.0%
! ATAAACTCCTACCATAAAAA+AGG - chr8_4:11166090-11166109 None:intergenic 25.0%
!!! ACCTTATTTTGTTGTGTTTA+CGG + chr8_4:11166155-11166174 Msa1313280:intron 25.0%
! TTATATCTTTATCTTCTTGC+AGG + chr8_4:11166216-11166235 Msa1313280:intron 25.0%
! AGATCATCATACAAAAGATT+CGG + chr8_4:11166738-11166757 Msa1313280:three_prime_UTR 25.0%
! TGAAATTATTTGGTCCATAT+AGG - chr8_4:11166820-11166839 None:intergenic 25.0%
! ATTTAACTGTATCAAAGCAA+AGG - chr8_4:11166856-11166875 None:intergenic 25.0%
! TTTGCTTTGATACAGTTAAA+TGG + chr8_4:11166855-11166874 Msa1313280:intron 25.0%
! AATCATATTAATGATGAAGG+CGG + chr8_4:11166943-11166962 Msa1313280:intron 25.0%
!!! TACCTTTTTTACAATTAGCA+AGG + chr8_4:11166993-11167012 Msa1313280:intron 25.0%
!!! ACCTTTTTTACAATTAGCAA+GGG + chr8_4:11166994-11167013 Msa1313280:intron 25.0%
! AATAATGAACTGATGTTACA+TGG - chr8_4:11167038-11167057 None:intergenic 25.0%
! TGAATTGATGTTACATTACA+TGG - chr8_4:11167089-11167108 None:intergenic 25.0%
!! AGTTTATTGACTGAGAATTA+TGG - chr8_4:11167189-11167208 None:intergenic 25.0%
!! GATTATTCAGTTACAGATTT+TGG + chr8_4:11167367-11167386 Msa1313280:three_prime_UTR 25.0%
!!! ACTCAACAACTATATTTTTG+GGG + chr8_4:11167551-11167570 Msa1313280:three_prime_UTR 25.0%
!!! TATTTTTGGGGAAAAAATGT+TGG + chr8_4:11167563-11167582 Msa1313280:three_prime_UTR 25.0%
!! GCTATTGATGATTTTGATAG+TGG + chr8_4:11160478-11160497 Msa1313280:CDS 30.0%
! GTGATTTTGGATCAGAAATT+AGG + chr8_4:11160583-11160602 Msa1313280:CDS 30.0%
! ACCACATTCTTTTCAACAAA+AGG - chr8_4:11160652-11160671 None:intergenic 30.0%
! TTCTTTTGATAAGTTTCGGA+AGG + chr8_4:11160702-11160721 Msa1313280:CDS 30.0%
! GTCTTCAATATATTTGCTAC+AGG - chr8_4:11160916-11160935 None:intergenic 30.0%
CAAGGTCAAAAATAAACTGA+AGG - chr8_4:11160965-11160984 None:intergenic 30.0%
!!! TTTACACTGTTGGTTTTAGT+TGG + chr8_4:11160996-11161015 Msa1313280:intron 30.0%
CATCACAAACAACACTAAAA+AGG - chr8_4:11161231-11161250 None:intergenic 30.0%
CAGGTATAATAAAAGTCTGT+TGG + chr8_4:11161295-11161314 Msa1313280:intron 30.0%
TATTCATTAAAAAGGGAGCT+GGG - chr8_4:11161340-11161359 None:intergenic 30.0%
! TTGTTACTTGTTGAGTGTTA+TGG + chr8_4:11161585-11161604 Msa1313280:intron 30.0%
!! CGCTAAATTTTGAGTGAAAA+TGG - chr8_4:11161787-11161806 None:intergenic 30.0%
GAGATAAAAACCACAGAAAA+CGG - chr8_4:11161846-11161865 None:intergenic 30.0%
!! CTACATTTGCTCCATTTTTA+AGG + chr8_4:11162161-11162180 Msa1313280:intron 30.0%
AAGGAAAGGTAAATAAAGAG+GGG - chr8_4:11162205-11162224 None:intergenic 30.0%
ACACTGCAAAATAAAAGGAA+AGG - chr8_4:11162219-11162238 None:intergenic 30.0%
TGCATTGCTAGGATAATTTA+TGG + chr8_4:11162373-11162392 Msa1313280:intron 30.0%
GCATTGCTAGGATAATTTAT+GGG + chr8_4:11162374-11162393 Msa1313280:intron 30.0%
! AAGACAATAGGTGTTCTTTT+TGG + chr8_4:11162454-11162473 Msa1313280:intron 30.0%
CTTTACAATGCAAGAAATTG+TGG + chr8_4:11162607-11162626 Msa1313280:intron 30.0%
AACACAAACTAATATTCGAG+AGG - chr8_4:11162821-11162840 None:intergenic 30.0%
!! AAATGTTGGTTTGAATTGGA+AGG + chr8_4:11162872-11162891 Msa1313280:intron 30.0%
!!! GTACCAAGTTTTAAACTATC+AGG + chr8_4:11162901-11162920 Msa1313280:three_prime_UTR 30.0%
!! ATCATTTTAGTCATCTCCAT+CGG + chr8_4:11162925-11162944 Msa1313280:three_prime_UTR 30.0%
AAATTGAAAGAACAGCATGA+TGG - chr8_4:11163223-11163242 None:intergenic 30.0%
! ATCTTAAAAAGGAGGGTTTT+TGG - chr8_4:11163288-11163307 None:intergenic 30.0%
ATAGAGGATCTTAAAAAGGA+GGG - chr8_4:11163295-11163314 None:intergenic 30.0%
TTGGATAGAGGATCTTAAAA+AGG - chr8_4:11163299-11163318 None:intergenic 30.0%
TGATTCCTGATAGGATATAA+TGG - chr8_4:11163423-11163442 None:intergenic 30.0%
TATCAAACATGATTCCTGAT+AGG - chr8_4:11163432-11163451 None:intergenic 30.0%
GAATCATGTTTGATATCCAA+AGG + chr8_4:11163437-11163456 Msa1313280:intron 30.0%
TAAGCTCTTCATATTCTTGT+TGG + chr8_4:11163577-11163596 Msa1313280:intron 30.0%
CGTCTATCAATTATAATGGT+TGG + chr8_4:11163604-11163623 Msa1313280:intron 30.0%
! TTAATATTCTAGAGAGCCAT+GGG - chr8_4:11163707-11163726 None:intergenic 30.0%
! TTTAATATTCTAGAGAGCCA+TGG - chr8_4:11163708-11163727 None:intergenic 30.0%
GCATATATAATACCTGCAAA+AGG - chr8_4:11163905-11163924 None:intergenic 30.0%
!! CAATTTGCATTTTTCAGAAG+GGG - chr8_4:11164134-11164153 None:intergenic 30.0%
!! CACAATTTGCATTTTTCAGA+AGG - chr8_4:11164136-11164155 None:intergenic 30.0%
CAATCATGTTTCTCATTTGT+CGG - chr8_4:11164366-11164385 None:intergenic 30.0%
TTGTTGATCCATAAGAAACA+AGG + chr8_4:11164437-11164456 Msa1313280:three_prime_UTR 30.0%
TGTTGATCCATAAGAAACAA+GGG + chr8_4:11164438-11164457 Msa1313280:three_prime_UTR 30.0%
! GTTTTCGTTGCTATGTTTAA+CGG + chr8_4:11164522-11164541 Msa1313280:three_prime_UTR 30.0%
TGAATGTGAAAAGGTAAAAG+TGG + chr8_4:11164582-11164601 Msa1313280:three_prime_UTR 30.0%
CAATAAATAAGAGTTCTCAC+CGG + chr8_4:11164708-11164727 Msa1313280:three_prime_UTR 30.0%
! ACATTCTTGCTTCATTTTCT+TGG + chr8_4:11164831-11164850 Msa1313280:three_prime_UTR 30.0%
! CATTCTTGCTTCATTTTCTT+GGG + chr8_4:11164832-11164851 Msa1313280:three_prime_UTR 30.0%
! ACACCAACTAATTTTTGTGA+AGG + chr8_4:11165027-11165046 Msa1313280:intron 30.0%
ACACCTTCACAAAAATTAGT+TGG - chr8_4:11165033-11165052 None:intergenic 30.0%
!!! TATATTTTTTCTGCTGCCTT+TGG + chr8_4:11165228-11165247 Msa1313280:intron 30.0%
TTTAAGGATTGATTGACCAA+AGG - chr8_4:11165247-11165266 None:intergenic 30.0%
TGTTCTATGGAACTAAATGT+TGG + chr8_4:11165342-11165361 Msa1313280:intron 30.0%
GTTCTATGGAACTAAATGTT+GGG + chr8_4:11165343-11165362 Msa1313280:intron 30.0%
! AGTTTTGCCTTAGATGATTT+AGG + chr8_4:11165521-11165540 Msa1313280:intron 30.0%
! GGATTTAGGTTTAAAATGTC+TGG + chr8_4:11165663-11165682 Msa1313280:intron 30.0%
TGTTAAACATGATTTACGAC+AGG + chr8_4:11165686-11165705 Msa1313280:intron 30.0%
AAAGATAGTGCTATCTACAA+AGG - chr8_4:11165804-11165823 None:intergenic 30.0%
TACAAGTAGAAGATAAACAC+AGG - chr8_4:11165844-11165863 None:intergenic 30.0%
!!! ATACTTTTTCCAATGACTTC+AGG + chr8_4:11165891-11165910 Msa1313280:intron 30.0%
! ATGAGTACTTTGATAGTTCA+TGG + chr8_4:11166018-11166037 Msa1313280:three_prime_UTR 30.0%
ACCGTAAACACAACAAAATA+AGG - chr8_4:11166159-11166178 None:intergenic 30.0%
AATTGATACCAATATGGTGA+CGG - chr8_4:11166314-11166333 None:intergenic 30.0%
!! TTTTTATATGATTGGTCCAG+TGG + chr8_4:11166355-11166374 Msa1313280:intron 30.0%
! TAAAGCACTATACGAGTAAT+AGG - chr8_4:11166385-11166404 None:intergenic 30.0%
AAAAATCTAGATTCATGCTC+AGG + chr8_4:11166410-11166429 Msa1313280:intron 30.0%
CCAGAACATTAAGTTCAATA+TGG - chr8_4:11166444-11166463 None:intergenic 30.0%
CCATATTGAACTTAATGTTC+TGG + chr8_4:11166441-11166460 Msa1313280:intron 30.0%
TTTACTTGGTTGAAAGGATT+TGG + chr8_4:11166512-11166531 Msa1313280:three_prime_UTR 30.0%
ATTTGGCCTATTCACTATTA+TGG + chr8_4:11166529-11166548 Msa1313280:three_prime_UTR 30.0%
AACCTGTTCACTTAAATGTT+TGG + chr8_4:11166673-11166692 Msa1313280:intron 30.0%
AACCAAACATTTAAGTGAAC+AGG - chr8_4:11166678-11166697 None:intergenic 30.0%
AGCCAAATATGTTATTCTTG+AGG + chr8_4:11166762-11166781 Msa1313280:three_prime_UTR 30.0%
CTCCTCAAGAATAACATATT+TGG - chr8_4:11166767-11166786 None:intergenic 30.0%
ATATGTTATTCTTGAGGAGA+TGG + chr8_4:11166768-11166787 Msa1313280:three_prime_UTR 30.0%
ATCATATTAATGATGAAGGC+GGG + chr8_4:11166944-11166963 Msa1313280:intron 30.0%
TCCCTTGCTAATTGTAAAAA+AGG - chr8_4:11166998-11167017 None:intergenic 30.0%
ATCAGTTCATTATTTGAGCA+AGG + chr8_4:11167044-11167063 Msa1313280:intron 30.0%
TCAGTTCATTATTTGAGCAA+GGG + chr8_4:11167045-11167064 Msa1313280:intron 30.0%
TTTCTTACCAATACAGTGAT+TGG + chr8_4:11167520-11167539 Msa1313280:three_prime_UTR 30.0%
! GGATACAATACAAGTTTGTT+TGG - chr8_4:11167630-11167649 None:intergenic 30.0%
!! TCAGAGAGTTGTAGCTTTAA+AGG + chr8_4:11160451-11160470 Msa1313280:CDS 35.0%
!! CAGAGAGTTGTAGCTTTAAA+GGG + chr8_4:11160452-11160471 Msa1313280:CDS 35.0%
!!! GATTTTGATAGTGGAAGTTC+AGG + chr8_4:11160487-11160506 Msa1313280:CDS 35.0%
! GCCTTTTGTTGAAAAGAATG+TGG + chr8_4:11160648-11160667 Msa1313280:CDS 35.0%
!!! TGCAAGGAAGAGTTTTAGAT+AGG + chr8_4:11160671-11160690 Msa1313280:CDS 35.0%
!!! GCAAGGAAGAGTTTTAGATA+GGG + chr8_4:11160672-11160691 Msa1313280:CDS 35.0%
TTGATAAGTTTCGGAAGGAA+AGG + chr8_4:11160707-11160726 Msa1313280:CDS 35.0%
TGGACGATGATTCTGTTTAT+AGG + chr8_4:11160758-11160777 Msa1313280:CDS 35.0%
GATGATTCTGTTTATAGGAG+AGG + chr8_4:11160763-11160782 Msa1313280:CDS 35.0%
TCTGTTTATAGGAGAGGTAA+TGG + chr8_4:11160769-11160788 Msa1313280:CDS 35.0%
GGACTGTCTTCAATATCAAA+AGG - chr8_4:11160811-11160830 None:intergenic 35.0%
ATATTGAAGACAGTCCTGAA+AGG + chr8_4:11160815-11160834 Msa1313280:CDS 35.0%
TATTGAAGACAGTCCTGAAA+GGG + chr8_4:11160816-11160835 Msa1313280:CDS 35.0%
TAAAACCAACAGTGTAAACG+AGG - chr8_4:11160994-11161013 None:intergenic 35.0%
GATAAGAGACGAAGCATAAA+AGG - chr8_4:11161259-11161278 None:intergenic 35.0%
GTATTCATTAAAAAGGGAGC+TGG - chr8_4:11161341-11161360 None:intergenic 35.0%
TATCCACTTTGTAATGCAAG+CGG + chr8_4:11161361-11161380 Msa1313280:intron 35.0%
AGACTAATGTTGTCATGTCT+TGG + chr8_4:11161426-11161445 Msa1313280:intron 35.0%
TAATGTTGTCATGTCTTGGA+GGG + chr8_4:11161430-11161449 Msa1313280:intron 35.0%
TGCGAGGTAAATTTCATTCT+TGG + chr8_4:11161462-11161481 Msa1313280:intron 35.0%
! TTTGCCTCATTTTCCATGTT+TGG - chr8_4:11161722-11161741 None:intergenic 35.0%
GAAAATGAGGCAAATAGACT+AGG + chr8_4:11161728-11161747 Msa1313280:intron 35.0%
CTCTCACTCTTATGATTATG+TGG + chr8_4:11161751-11161770 Msa1313280:intron 35.0%
! TTGCATAAAAGTGTGCTTCA+GGG - chr8_4:11161901-11161920 None:intergenic 35.0%
! TTTGCATAAAAGTGTGCTTC+AGG - chr8_4:11161902-11161921 None:intergenic 35.0%
ATATCAACTAATGCCACAGA+TGG + chr8_4:11161960-11161979 Msa1313280:intron 35.0%
! ACATTTGCTACAATGGTTTG+TGG + chr8_4:11162070-11162089 Msa1313280:intron 35.0%
! TGGTAATGTTACATCAGAAC+CGG + chr8_4:11162135-11162154 Msa1313280:intron 35.0%
AAAGGTAAATAAAGAGGGGA+AGG - chr8_4:11162201-11162220 None:intergenic 35.0%
!! TCTTGTTTGCTTTTGCTTTC+CGG + chr8_4:11162264-11162283 Msa1313280:three_prime_UTR 35.0%
CAAAATGAAAGGAAACTCAC+CGG - chr8_4:11162286-11162305 None:intergenic 35.0%
TGCATATCTCAGAAGACAAT+AGG + chr8_4:11162442-11162461 Msa1313280:intron 35.0%
AGGCATCATAGATGAGAATT+GGG - chr8_4:11162562-11162581 None:intergenic 35.0%
TAGGCATCATAGATGAGAAT+TGG - chr8_4:11162563-11162582 None:intergenic 35.0%
!! ACCTAAAAGTGCTGTTAGAA+TGG + chr8_4:11162667-11162686 Msa1313280:intron 35.0%
!!! TTCATGCTGCTTTGTGATTT+TGG + chr8_4:11162764-11162783 Msa1313280:intron 35.0%
!! ATGTACATTGATTCGCACTT+AGG + chr8_4:11163008-11163027 Msa1313280:intron 35.0%
! TACTTCTGTAGGGTATCTTT+GGG + chr8_4:11163088-11163107 Msa1313280:intron 35.0%
!! TAAAAAGGAGGGTTTTTGGA+GGG - chr8_4:11163284-11163303 None:intergenic 35.0%
!! TTAAAAAGGAGGGTTTTTGG+AGG - chr8_4:11163285-11163304 None:intergenic 35.0%
GATAGAGGATCTTAAAAAGG+AGG - chr8_4:11163296-11163315 None:intergenic 35.0%
CAACTCCATTATATCCTATC+AGG + chr8_4:11163415-11163434 Msa1313280:intron 35.0%
!!! CTGTCTGTATGCTACTTTTT+TGG - chr8_4:11163476-11163495 None:intergenic 35.0%
TTATTGCCTGTTCGAAATTC+TGG - chr8_4:11163560-11163579 None:intergenic 35.0%
! CGTTAGTTATTCTTTTCCCA+TGG + chr8_4:11163688-11163707 Msa1313280:intron 35.0%
AAGTGCATTGTTCAAGCTTT+AGG + chr8_4:11163727-11163746 Msa1313280:intron 35.0%
ATAATGCAGATCTTACACGA+GGG - chr8_4:11164202-11164221 None:intergenic 35.0%
AATAATGCAGATCTTACACG+AGG - chr8_4:11164203-11164222 None:intergenic 35.0%
TCGTGTAAGATCTGCATTAT+TGG + chr8_4:11164202-11164221 Msa1313280:three_prime_UTR 35.0%
GAACAAAGCGATTAAACTGT+AGG - chr8_4:11164308-11164327 None:intergenic 35.0%
!! TGACAACTTTGAAGGGTTTT+GGG - chr8_4:11164410-11164429 None:intergenic 35.0%
!! TTGACAACTTTGAAGGGTTT+TGG - chr8_4:11164411-11164430 None:intergenic 35.0%
GTTGATCCATAAGAAACAAG+GGG + chr8_4:11164439-11164458 Msa1313280:three_prime_UTR 35.0%
TTGATCCATAAGAAACAAGG+GGG + chr8_4:11164440-11164459 Msa1313280:three_prime_UTR 35.0%
! AATTTCCCCCTTGTTTCTTA+TGG - chr8_4:11164448-11164467 None:intergenic 35.0%
TCACATTCACTTCTATGCTT+CGG - chr8_4:11164571-11164590 None:intergenic 35.0%
GCATAGAAGTGAATGTGAAA+AGG + chr8_4:11164573-11164592 Msa1313280:three_prime_UTR 35.0%
GGTAAAAGTGGAGAACAATT+TGG + chr8_4:11164594-11164613 Msa1313280:three_prime_UTR 35.0%
AAAAGTGGAGAACAATTTGG+TGG + chr8_4:11164597-11164616 Msa1313280:three_prime_UTR 35.0%
ACAATAATAGGGATCGTATC+CGG - chr8_4:11164730-11164749 None:intergenic 35.0%
TTTGTGTGTGTATGTGTAGA+TGG - chr8_4:11164771-11164790 None:intergenic 35.0%
CAAATGGCAATAGGATAACT+TGG - chr8_4:11165000-11165019 None:intergenic 35.0%
! GTCTTTTAGCAAATGGCAAT+AGG - chr8_4:11165009-11165028 None:intergenic 35.0%
!! AGTTGGTGTCTTTTAGCAAA+TGG - chr8_4:11165016-11165035 None:intergenic 35.0%
TTGCTAAAAGACACCTCTAA+AGG + chr8_4:11165104-11165123 Msa1313280:intron 35.0%
TGCTAAAAGACACCTCTAAA+GGG + chr8_4:11165105-11165124 Msa1313280:intron 35.0%
ATAAGACTGGCAATGTTCTA+TGG + chr8_4:11165329-11165348 Msa1313280:intron 35.0%
! TAAGAGGTATAGAAAGACCA+AGG + chr8_4:11165614-11165633 Msa1313280:intron 35.0%
GATAAACACAGGCAAAGAAA+AGG - chr8_4:11165833-11165852 None:intergenic 35.0%
!! TTTTTCAGACCTGAAGTCAT+TGG - chr8_4:11165903-11165922 None:intergenic 35.0%
TAATGCAAGAGAAAGAAGTG+CGG - chr8_4:11165973-11165992 None:intergenic 35.0%
TTTCTCTTGCATTAGATCCT+TGG + chr8_4:11165979-11165998 Msa1313280:three_prime_UTR 35.0%
TTCTCTTGCATTAGATCCTT+GGG + chr8_4:11165980-11165999 Msa1313280:three_prime_UTR 35.0%
AGTTTCTTGCTGATGTTCTT+TGG + chr8_4:11166053-11166072 Msa1313280:three_prime_UTR 35.0%
!!! TGGAACACTTGCCTTTTTTA+TGG + chr8_4:11166076-11166095 Msa1313280:three_prime_UTR 35.0%
!!! ACACTTGCCTTTTTTATGGT+AGG + chr8_4:11166080-11166099 Msa1313280:intron 35.0%
ACTTTCATGATGCGTTTACT+TGG + chr8_4:11166498-11166517 Msa1313280:three_prime_UTR 35.0%
CACCAACCATAATAGTGAAT+AGG - chr8_4:11166538-11166557 None:intergenic 35.0%
ATCAAAGCAAAGGCTTACTT+TGG - chr8_4:11166846-11166865 None:intergenic 35.0%
CTTCAATATTCACGTGATTC+AGG - chr8_4:11167241-11167260 None:intergenic 35.0%
CTGAATCACGTGAATATTGA+AGG + chr8_4:11167239-11167258 Msa1313280:intron 35.0%
AAGCAATGATTTCGAAGAAG+AGG + chr8_4:11167265-11167284 Msa1313280:three_prime_UTR 35.0%
AGCAATGATTTCGAAGAAGA+GGG + chr8_4:11167266-11167285 Msa1313280:three_prime_UTR 35.0%
GGACACAAAAATATCTTCCA+GGG + chr8_4:11167287-11167306 Msa1313280:three_prime_UTR 35.0%
ACCAATACAGTGATTGGTAA+TGG + chr8_4:11167526-11167545 Msa1313280:three_prime_UTR 35.0%
ACCATTACCAATCACTGTAT+TGG - chr8_4:11167530-11167549 None:intergenic 35.0%
!! TTTTGGGGAAAAAATGTTGG+AGG + chr8_4:11167566-11167585 Msa1313280:three_prime_UTR 35.0%
TTTGGGGAAAAAATGTTGGA+GGG + chr8_4:11167567-11167586 Msa1313280:three_prime_UTR 35.0%
GGTCAATTTCGTTGTTACAT+TGG + chr8_4:11167588-11167607 Msa1313280:three_prime_UTR 35.0%
!! ACAAGTTTGTTTGGTGTTGA+AGG - chr8_4:11167621-11167640 None:intergenic 35.0%
! TGTGACGACGATGATAATGA+TGG + chr8_4:11160547-11160566 Msa1313280:CDS 40.0%
!! GATGATAATGATGGTGGTGA+TGG + chr8_4:11160556-11160575 Msa1313280:CDS 40.0%
!! ATAATGATGGTGGTGATGGA+AGG + chr8_4:11160560-11160579 Msa1313280:CDS 40.0%
!! TAATGATGGTGGTGATGGAA+GGG + chr8_4:11160561-11160580 Msa1313280:CDS 40.0%
GGATCAGAAATTAGGTGATG+AGG + chr8_4:11160591-11160610 Msa1313280:CDS 40.0%
GTTGAAAAGAATGTGGTGCA+AGG + chr8_4:11160655-11160674 Msa1313280:CDS 40.0%
ATCGTACTAGCACCATTCAT+CGG - chr8_4:11160739-11160758 None:intergenic 40.0%
ATTGAAGACAGTCCTGAAAG+GGG + chr8_4:11160817-11160836 Msa1313280:CDS 40.0%
GTGTAAACGAGGAACTTACA+AGG - chr8_4:11160983-11161002 None:intergenic 40.0%
AAGTTCCTCGTTTACACTGT+TGG + chr8_4:11160986-11161005 Msa1313280:intron 40.0%
AAGTCTGTTGGGAGATCATA+TGG + chr8_4:11161307-11161326 Msa1313280:intron 40.0%
AGTCTGTTGGGAGATCATAT+GGG + chr8_4:11161308-11161327 Msa1313280:intron 40.0%
CTAATGTTGTCATGTCTTGG+AGG + chr8_4:11161429-11161448 Msa1313280:intron 40.0%
!!! TGGAGGGATTATTTTTTGCG+AGG + chr8_4:11161446-11161465 Msa1313280:intron 40.0%
AATGTTACGTGGTCCAAACA+TGG + chr8_4:11161706-11161725 Msa1313280:intron 40.0%
TGGTCCAAACATGGAAAATG+AGG + chr8_4:11161715-11161734 Msa1313280:intron 40.0%
! CTCTGTCACATTTGCTACAA+TGG + chr8_4:11162063-11162082 Msa1313280:three_prime_UTR 40.0%
AATGGAGCAAATGTAGAGTC+CGG - chr8_4:11162157-11162176 None:intergenic 40.0%
GCAAACAAGAGGAGAAAGAT+TGG - chr8_4:11162254-11162273 None:intergenic 40.0%
GGAAAGCAAAAGCAAACAAG+AGG - chr8_4:11162265-11162284 None:intergenic 40.0%
ATTTAAGGAGCTGCATTGCT+AGG + chr8_4:11162362-11162381 Msa1313280:intron 40.0%
TGGGAGCGATTAATGCATAA+AGG + chr8_4:11162393-11162412 Msa1313280:intron 40.0%
! GCCATTCTAACAGCACTTTT+AGG - chr8_4:11162671-11162690 None:intergenic 40.0%
!! GTTGGTTTGAATTGGAAGGT+TGG + chr8_4:11162876-11162895 Msa1313280:intron 40.0%
TTCAAAAGATCAAGCCAGCA+TGG + chr8_4:11163033-11163052 Msa1313280:intron 40.0%
AGGTACATCTGTACTTCTGT+AGG + chr8_4:11163077-11163096 Msa1313280:intron 40.0%
GGTACATCTGTACTTCTGTA+GGG + chr8_4:11163078-11163097 Msa1313280:intron 40.0%
! GTACTTCTGTAGGGTATCTT+TGG + chr8_4:11163087-11163106 Msa1313280:intron 40.0%
! TATCTTTGGGTGGAGGATTT+TGG + chr8_4:11163101-11163120 Msa1313280:intron 40.0%
TGGATGTCAACAACAACCTT+TGG - chr8_4:11163456-11163475 None:intergenic 40.0%
GTAGCATACAGACAGAAGTT+CGG + chr8_4:11163481-11163500 Msa1313280:intron 40.0%
CAGTTACCAGAATTTCGAAC+AGG + chr8_4:11163551-11163570 Msa1313280:intron 40.0%
! TATGACTCAGATCCTTTTGC+AGG + chr8_4:11163890-11163909 Msa1313280:three_prime_UTR 40.0%
! ATTATTGTTGGGAGCGTATC+TGG + chr8_4:11163941-11163960 Msa1313280:three_prime_UTR 40.0%
TGTAGGAAGGAGGTAAAAGA+GGG - chr8_4:11164076-11164095 None:intergenic 40.0%
ATGTAGGAAGGAGGTAAAAG+AGG - chr8_4:11164077-11164096 None:intergenic 40.0%
AGTCAAGAGATGATGTAGGA+AGG - chr8_4:11164089-11164108 None:intergenic 40.0%
GATGAGTCAAGAGATGATGT+AGG - chr8_4:11164093-11164112 None:intergenic 40.0%
!! TTTGCATTTTTCAGAAGGGG+AGG - chr8_4:11164131-11164150 None:intergenic 40.0%
CCGTGTTTGACAACTTTGAA+GGG - chr8_4:11164417-11164436 None:intergenic 40.0%
CCCTTCAAAGTTGTCAAACA+CGG + chr8_4:11164414-11164433 Msa1313280:three_prime_UTR 40.0%
ACCGTGTTTGACAACTTTGA+AGG - chr8_4:11164418-11164437 None:intergenic 40.0%
AATGTTCAGTTAGCGATAGC+AGG - chr8_4:11164816-11164835 None:intergenic 40.0%
! CTTGCTTCATTTTCTTGGGT+TGG + chr8_4:11164836-11164855 Msa1313280:three_prime_UTR 40.0%
ATGTGCAAGGAACTTACCAT+AGG - chr8_4:11164919-11164938 None:intergenic 40.0%
AAGTGGATAATCACACCTTG+AGG + chr8_4:11165075-11165094 Msa1313280:intron 40.0%
GATAGAAAGTTGAGAGTGAG+AGG + chr8_4:11165471-11165490 Msa1313280:intron 40.0%
GCAAGTGCCTAAATCATCTA+AGG - chr8_4:11165531-11165550 None:intergenic 40.0%
TTGCAAAGAAGACCAGAAGA+AGG + chr8_4:11165547-11165566 Msa1313280:intron 40.0%
!!! AAAGCCTTTTTCAACCACGT+GGG - chr8_4:11165742-11165761 None:intergenic 40.0%
ACATAGCTCATCAAGGTAAG+TGG - chr8_4:11165927-11165946 None:intergenic 40.0%
! TTTTCTCGGAATTCTTCCCA+AGG - chr8_4:11165999-11166018 None:intergenic 40.0%
TTCTTGCTGATGTTCTTTGG+TGG + chr8_4:11166056-11166075 Msa1313280:three_prime_UTR 40.0%
! TATATGATTGGTCCAGTGGA+TGG + chr8_4:11166359-11166378 Msa1313280:intron 40.0%
! GTTTCATGCTGTTTGTGTGT+AGG + chr8_4:11166463-11166482 Msa1313280:intron 40.0%
GATGCGTTTACTTGGTTGAA+AGG + chr8_4:11166506-11166525 Msa1313280:three_prime_UTR 40.0%
GGCCTATTCACTATTATGGT+TGG + chr8_4:11166533-11166552 Msa1313280:three_prime_UTR 40.0%
GTGGCATCTGAAAACCTATA+TGG + chr8_4:11166803-11166822 Msa1313280:three_prime_UTR 40.0%
GGGACACAAAAATATCTTCC+AGG + chr8_4:11167286-11167305 Msa1313280:three_prime_UTR 40.0%
! GACAGAATAGAAGAGAGCAT+TGG - chr8_4:11167338-11167357 None:intergenic 40.0%
!! TTTTGAGAATGTAAGGGGAG+GGG - chr8_4:11167660-11167679 None:intergenic 40.0%
!! CTTTTGAGAATGTAAGGGGA+GGG - chr8_4:11167661-11167680 None:intergenic 40.0%
!! GGAGCTTTTGAGAATGTAAG+GGG - chr8_4:11167665-11167684 None:intergenic 40.0%
!! GGGAGCTTTTGAGAATGTAA+GGG - chr8_4:11167666-11167685 None:intergenic 40.0%
!! GATAGTGGAAGTTCAGGATC+CGG + chr8_4:11160493-11160512 Msa1313280:CDS 45.0%
GAAGTTCAGGATCCGGTATT+CGG + chr8_4:11160500-11160519 Msa1313280:CDS 45.0%
! GACGACGATGATAATGATGG+TGG + chr8_4:11160550-11160569 Msa1313280:CDS 45.0%
!!! TGGTGATGGAAGGGTGATTT+TGG + chr8_4:11160570-11160589 Msa1313280:CDS 45.0%
! GATGAATGGTGCTAGTACGA+TGG + chr8_4:11160738-11160757 Msa1313280:CDS 45.0%
! TGGTGGTGACTCGTATGATT+CGG + chr8_4:11160846-11160865 Msa1313280:CDS 45.0%
GAACCGCTTGCATTACAAAG+TGG - chr8_4:11161367-11161386 None:intergenic 45.0%
!!! ATTGGTTGTGCCGTTTTCTG+TGG + chr8_4:11161833-11161852 Msa1313280:intron 45.0%
TGAAAGGCAAAGTCCATCTG+TGG - chr8_4:11161976-11161995 None:intergenic 45.0%
ATAGCTGTTCCAAGAGCAGT+CGG - chr8_4:11162007-11162026 None:intergenic 45.0%
GGTTTGAATTGGAAGGTTGG+AGG + chr8_4:11162879-11162898 Msa1313280:intron 45.0%
TCCATCGGCATATTACTGAC+AGG + chr8_4:11162940-11162959 Msa1313280:three_prime_UTR 45.0%
ACCTGTCAGTAATATGCCGA+TGG - chr8_4:11162944-11162963 None:intergenic 45.0%
TTCCTACAAGCTCAGTGGTT+AGG + chr8_4:11163057-11163076 Msa1313280:intron 45.0%
TACCTAACCACTGAGCTTGT+AGG - chr8_4:11163062-11163081 None:intergenic 45.0%
! TTCTGTAGGGTATCTTTGGG+TGG + chr8_4:11163091-11163110 Msa1313280:intron 45.0%
! TACTACTGTAAGGGTGTGCT+TGG - chr8_4:11163318-11163337 None:intergenic 45.0%
AGCGATATGGCATGCTAAGA+TGG - chr8_4:11163367-11163386 None:intergenic 45.0%
TTAGCATGCCATATCGCTCT+AGG + chr8_4:11163369-11163388 Msa1313280:intron 45.0%
CAATCCTACCTAGAGCGATA+TGG - chr8_4:11163380-11163399 None:intergenic 45.0%
! CATATCGCTCTAGGTAGGAT+TGG + chr8_4:11163378-11163397 Msa1313280:intron 45.0%
! ATGCTTGCTGCTGTTATGTC+TGG + chr8_4:11163855-11163874 Msa1313280:three_prime_UTR 45.0%
! TGCTTGCTGCTGTTATGTCT+GGG + chr8_4:11163856-11163875 Msa1313280:three_prime_UTR 45.0%
TAAGAGGAAGAATTGAGCGG+AGG - chr8_4:11164053-11164072 None:intergenic 45.0%
GGGTAAGAGGAAGAATTGAG+CGG - chr8_4:11164056-11164075 None:intergenic 45.0%
AGGAGGTAAAAGAGGGTAAG+AGG - chr8_4:11164069-11164088 None:intergenic 45.0%
CAAGAGATGATGTAGGAAGG+AGG - chr8_4:11164086-11164105 None:intergenic 45.0%
TTCAGAAGGGGAGGAAGATA+GGG - chr8_4:11164122-11164141 None:intergenic 45.0%
TTTCAGAAGGGGAGGAAGAT+AGG - chr8_4:11164123-11164142 None:intergenic 45.0%
ACTAGGCTACCTGTGAAGTA+TGG - chr8_4:11164233-11164252 None:intergenic 45.0%
! AGTGGAGAACAATTTGGTGG+AGG + chr8_4:11164600-11164619 Msa1313280:three_prime_UTR 45.0%
! GTGGAGAACAATTTGGTGGA+GGG + chr8_4:11164601-11164620 Msa1313280:three_prime_UTR 45.0%
! TGGAGAACAATTTGGTGGAG+GGG + chr8_4:11164602-11164621 Msa1313280:three_prime_UTR 45.0%
GATAATCACACCTTGAGGTG+TGG + chr8_4:11165080-11165099 Msa1313280:intron 45.0%
! TTTTAGCAAGCCACACCTCA+AGG - chr8_4:11165093-11165112 None:intergenic 45.0%
TGCTAGAAGACACCCTTTAG+AGG - chr8_4:11165120-11165139 None:intergenic 45.0%
GTGTGGACAAAATCCATGAC+TGG - chr8_4:11165305-11165324 None:intergenic 45.0%
TGTCCACACAGCTATAAGAC+TGG + chr8_4:11165316-11165335 Msa1313280:intron 45.0%
! TTGCCAGTCTTATAGCTGTG+TGG - chr8_4:11165322-11165341 None:intergenic 45.0%
GACCAGAAGAAGGCCTAATA+CGG + chr8_4:11165557-11165576 Msa1313280:intron 45.0%
AGAAGAAGGCCTAATACGGA+CGG + chr8_4:11165561-11165580 Msa1313280:intron 45.0%
TGCGATTTACCGTCCGTATT+AGG - chr8_4:11165573-11165592 None:intergenic 45.0%
TCCATATAACTAACCCCACG+TGG + chr8_4:11165725-11165744 Msa1313280:intron 45.0%
!! ACCACGTGGGGTTAGTTATA+TGG - chr8_4:11165729-11165748 None:intergenic 45.0%
TAACCCCACGTGGTTGAAAA+AGG + chr8_4:11165735-11165754 Msa1313280:intron 45.0%
!!! AAGCCTTTTTCAACCACGTG+GGG - chr8_4:11165741-11165760 None:intergenic 45.0%
!!! CAAAGCCTTTTTCAACCACG+TGG - chr8_4:11165743-11165762 None:intergenic 45.0%
CACAGGCAAAGAAAAGGATC+AGG - chr8_4:11165827-11165846 None:intergenic 45.0%
TGGAGCTACATAGCTCATCA+AGG - chr8_4:11165934-11165953 None:intergenic 45.0%
GAGCTATGTAGCTCCAGTAA+TGG + chr8_4:11165938-11165957 Msa1313280:three_prime_UTR 45.0%
CACAATAGCAGGGGTTGTTA+AGG + chr8_4:11166285-11166304 Msa1313280:three_prime_UTR 45.0%
AATAGCAGGGGTTGTTAAGG+AGG + chr8_4:11166288-11166307 Msa1313280:three_prime_UTR 45.0%
! TGCTGTTTGTGTGTAGGTTG+CGG + chr8_4:11166469-11166488 Msa1313280:intron 45.0%
AGATACCAGAAGCTTCATGC+AGG + chr8_4:11166703-11166722 Msa1313280:intron 45.0%
GAGGAGATGGATGAACAAGA+TGG + chr8_4:11166781-11166800 Msa1313280:three_prime_UTR 45.0%
GAGATGGATGAACAAGATGG+TGG + chr8_4:11166784-11166803 Msa1313280:three_prime_UTR 45.0%
!! TGGCGTTGATGATATGGCTA+AGG - chr8_4:11167318-11167337 None:intergenic 45.0%
!! GAGCATTGGCGTTGATGATA+TGG - chr8_4:11167324-11167343 None:intergenic 45.0%
TTTGAGAATGTAAGGGGAGG+GGG - chr8_4:11167659-11167678 None:intergenic 45.0%
!! GCTTTTGAGAATGTAAGGGG+AGG - chr8_4:11167662-11167681 None:intergenic 45.0%
!! GGGGAGCTTTTGAGAATGTA+AGG - chr8_4:11167667-11167686 None:intergenic 45.0%
!!! AATGAAATAATTTATTTTTT+TGG + chr8_4:11162115-11162134 Msa1313280:intron 5.0%
!! TATATAAATATACAATAATA+GGG - chr8_4:11164741-11164760 None:intergenic 5.0%
!! ATATATAAATATACAATAAT+AGG - chr8_4:11164742-11164761 None:intergenic 5.0%
!!! AAAAATATTTTAATAATACT+AGG - chr8_4:11167470-11167489 None:intergenic 5.0%
!!! GTATTATTAAAATATTTTTT+TGG + chr8_4:11167471-11167490 Msa1313280:three_prime_UTR 5.0%
CGAAAGCTCTCTCCGAATAC+CGG - chr8_4:11160515-11160534 None:intergenic 50.0%
! GAGAGCTTTCGTTTTCGCGT+TGG + chr8_4:11160524-11160543 Msa1313280:CDS 50.0%
! GAAAGGATCGTGCCGATGAA+TGG + chr8_4:11160724-11160743 Msa1313280:CDS 50.0%
AGTCCTGAAAGGGGAACAGT+TGG + chr8_4:11160826-11160845 Msa1313280:CDS 50.0%
GGTGGTGACTCGTATGATTC+GGG + chr8_4:11160847-11160866 Msa1313280:CDS 50.0%
GTGGTGACTCGTATGATTCG+GGG + chr8_4:11160848-11160867 Msa1313280:CDS 50.0%
! TGGTGACTCGTATGATTCGG+GGG + chr8_4:11160849-11160868 Msa1313280:CDS 50.0%
TAGCTGTTCCAAGAGCAGTC+GGG - chr8_4:11162006-11162025 None:intergenic 50.0%
GACTGCTCTTGGAACAGCTA+TGG + chr8_4:11162006-11162025 Msa1313280:three_prime_UTR 50.0%
ATGGCTTCCTACAAGCTCAG+TGG + chr8_4:11163052-11163071 Msa1313280:intron 50.0%
! TGTAGGGTATCTTTGGGTGG+AGG + chr8_4:11163094-11163113 Msa1313280:intron 50.0%
! CTTTGGGTGGAGGATTTTGG+AGG + chr8_4:11163104-11163123 Msa1313280:intron 50.0%
!! TGGAGGATTTTGGAGGAGAG+TGG + chr8_4:11163111-11163130 Msa1313280:intron 50.0%
!! GGAGGATTTTGGAGGAGAGT+GGG + chr8_4:11163112-11163131 Msa1313280:intron 50.0%
!! GAGGATTTTGGAGGAGAGTG+GGG + chr8_4:11163113-11163132 Msa1313280:intron 50.0%
!! AGGATTTTGGAGGAGAGTGG+GGG + chr8_4:11163114-11163133 Msa1313280:intron 50.0%
! GTAAGGGTGTGCTTGGATAG+AGG - chr8_4:11163311-11163330 None:intergenic 50.0%
! CATGCCATATCGCTCTAGGT+AGG + chr8_4:11163373-11163392 Msa1313280:intron 50.0%
CTGTTATGTCTGGGTTTCGC+TGG + chr8_4:11163865-11163884 Msa1313280:three_prime_UTR 50.0%
AGGAAGAATTGAGCGGAGGA+GGG - chr8_4:11164049-11164068 None:intergenic 50.0%
CAACACAGTGTGCAGTTTGG+CGG - chr8_4:11164177-11164196 None:intergenic 50.0%
GCACAACACAGTGTGCAGTT+TGG - chr8_4:11164180-11164199 None:intergenic 50.0%
TTGGACCGTCCATACTTCAC+AGG + chr8_4:11164221-11164240 Msa1313280:three_prime_UTR 50.0%
GGCTACCTGTGAAGTATGGA+CGG - chr8_4:11164229-11164248 None:intergenic 50.0%
GCTATGTTTAACGGTGACGC+CGG + chr8_4:11164531-11164550 Msa1313280:three_prime_UTR 50.0%
ACTTCTATGCTTCGGCCTCA+AGG - chr8_4:11164563-11164582 None:intergenic 50.0%
GTCCGTATTAGGCCTTCTTC+TGG - chr8_4:11165562-11165581 None:intergenic 50.0%
TACGGACGGTAAATCGCATG+TGG + chr8_4:11165575-11165594 Msa1313280:intron 50.0%
TGTAGCTCCAGTAATGGCTG+TGG + chr8_4:11165944-11165963 Msa1313280:three_prime_UTR 50.0%
CCCTGCTATTGTGACTGTGA+CGG - chr8_4:11166278-11166297 None:intergenic 50.0%
CCGTCACAGTCACAATAGCA+GGG + chr8_4:11166275-11166294 Msa1313280:three_prime_UTR 50.0%
CGTCACAGTCACAATAGCAG+GGG + chr8_4:11166276-11166295 Msa1313280:three_prime_UTR 50.0%
TAAGGAGGCCGTCACCATAT+TGG + chr8_4:11166303-11166322 Msa1313280:three_prime_UTR 50.0%
ACGAGTAATAGGCCATCCAC+TGG - chr8_4:11166374-11166393 None:intergenic 50.0%
TGTCACCTGCATGAAGCTTC+TGG - chr8_4:11166711-11166730 None:intergenic 50.0%
GCTTCATGCAGGTGACAATG+TGG + chr8_4:11166714-11166733 Msa1313280:three_prime_UTR 50.0%
ATATGGCTAAGGCAAGTCCC+TGG - chr8_4:11167307-11167326 None:intergenic 50.0%
TTGAGAATGTAAGGGGAGGG+GGG - chr8_4:11167658-11167677 None:intergenic 50.0%
CCACCAACTGTTCCCCTTTC+AGG - chr8_4:11160832-11160851 None:intergenic 55.0%
CCTGAAAGGGGAACAGTTGG+TGG + chr8_4:11160829-11160848 Msa1313280:CDS 55.0%
! GGTGACTCGTATGATTCGGG+GGG + chr8_4:11160850-11160869 Msa1313280:CDS 55.0%
! TATGATTCGGGGGGTGGTGT+TGG + chr8_4:11160859-11160878 Msa1313280:CDS 55.0%
GCAGTCGGGACAACTGTGAA+AGG - chr8_4:11161992-11162011 None:intergenic 55.0%
ACAGTTGTCCCGACTGCTCT+TGG + chr8_4:11161995-11162014 Msa1313280:three_prime_UTR 55.0%
GAGCTTGTAGGAAGCCATGC+TGG - chr8_4:11163050-11163069 None:intergenic 55.0%
!! GGATTTTGGAGGAGAGTGGG+GGG + chr8_4:11163115-11163134 Msa1313280:intron 55.0%
GAGGAAGAATTGAGCGGAGG+AGG - chr8_4:11164050-11164069 None:intergenic 55.0%
GGGGAGGAAGATAGGGTTGA+TGG - chr8_4:11164115-11164134 None:intergenic 55.0%
TTCGGCCTCAAGGTTGTAGC+CGG - chr8_4:11164553-11164572 None:intergenic 55.0%
GCCGTCACAGTCACAATAGC+AGG + chr8_4:11166274-11166293 Msa1313280:three_prime_UTR 55.0%
! GACTCGTATGATTCGGGGGG+TGG + chr8_4:11160853-11160872 Msa1313280:CDS 60.0%
! TGACGCCGGCTACAACCTTG+AGG + chr8_4:11164545-11164564 Msa1313280:three_prime_UTR 60.0%
GCGGTTGCCACAGCCATTAC+TGG - chr8_4:11165954-11165973 None:intergenic 60.0%
GAATGTAAGGGGAGGGGGGT+AGG - chr8_4:11167654-11167673 None:intergenic 60.0%
TGTAAGGGGAGGGGGGTAGG+AGG - chr8_4:11167651-11167670 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr8_4 gene 11160430 11167706 11160430 ID=Msa1313280;Name=Msa1313280
chr8_4 mRNA 11160430 11167706 11160430 ID=Msa1313280-mRNA-1;Parent=Msa1313280;Name=Msa1313280-mRNA-1;_AED=0.16;_eAED=0.16;_QI=0|0.88|0.9|1|0.77|0.7|10|2290|175
chr8_4 exon 11160430 11160956 11160430 ID=Msa1313280-mRNA-1:exon:4141;Parent=Msa1313280-mRNA-1
chr8_4 exon 11161979 11162084 11161979 ID=Msa1313280-mRNA-1:exon:4142;Parent=Msa1313280-mRNA-1
chr8_4 exon 11162236 11162285 11162236 ID=Msa1313280-mRNA-1:exon:4143;Parent=Msa1313280-mRNA-1
chr8_4 exon 11162894 11162961 11162894 ID=Msa1313280-mRNA-1:exon:4144;Parent=Msa1313280-mRNA-1
chr8_4 exon 11163811 11164921 11163811 ID=Msa1313280-mRNA-1:exon:4145;Parent=Msa1313280-mRNA-1
chr8_4 exon 11165913 11166097 11165913 ID=Msa1313280-mRNA-1:exon:4146;Parent=Msa1313280-mRNA-1
chr8_4 exon 11166238 11166324 11166238 ID=Msa1313280-mRNA-1:exon:4147;Parent=Msa1313280-mRNA-1
chr8_4 exon 11166485 11166579 11166485 ID=Msa1313280-mRNA-1:exon:4148;Parent=Msa1313280-mRNA-1
chr8_4 exon 11166705 11166847 11166705 ID=Msa1313280-mRNA-1:exon:4149;Parent=Msa1313280-mRNA-1
chr8_4 exon 11167261 11167706 11167261 ID=Msa1313280-mRNA-1:exon:4150;Parent=Msa1313280-mRNA-1
chr8_4 CDS 11160430 11160956 11160430 ID=Msa1313280-mRNA-1:cds;Parent=Msa1313280-mRNA-1
chr8_4 CDS 11161979 11161979 11161979 ID=Msa1313280-mRNA-1:cds;Parent=Msa1313280-mRNA-1
chr8_4 three_prime_UTR 11161980 11162084 11161980 ID=Msa1313280-mRNA-1:three_prime_utr;Parent=Msa1313280-mRNA-1
chr8_4 three_prime_UTR 11162236 11162285 11162236 ID=Msa1313280-mRNA-1:three_prime_utr;Parent=Msa1313280-mRNA-1
chr8_4 three_prime_UTR 11162894 11162961 11162894 ID=Msa1313280-mRNA-1:three_prime_utr;Parent=Msa1313280-mRNA-1
chr8_4 three_prime_UTR 11163811 11164921 11163811 ID=Msa1313280-mRNA-1:three_prime_utr;Parent=Msa1313280-mRNA-1
chr8_4 three_prime_UTR 11165913 11166097 11165913 ID=Msa1313280-mRNA-1:three_prime_utr;Parent=Msa1313280-mRNA-1
chr8_4 three_prime_UTR 11166238 11166324 11166238 ID=Msa1313280-mRNA-1:three_prime_utr;Parent=Msa1313280-mRNA-1
chr8_4 three_prime_UTR 11166485 11166579 11166485 ID=Msa1313280-mRNA-1:three_prime_utr;Parent=Msa1313280-mRNA-1
chr8_4 three_prime_UTR 11166705 11166847 11166705 ID=Msa1313280-mRNA-1:three_prime_utr;Parent=Msa1313280-mRNA-1
chr8_4 three_prime_UTR 11167261 11167706 11167261 ID=Msa1313280-mRNA-1:three_prime_utr;Parent=Msa1313280-mRNA-1
Gene Sequence

>Msa1313280

ATGGTACACATTGAATTAGATTCAGAGAGTTGTAGCTTTAAAGGGATTGCTATTGATGATTTTGATAGTGGAAGTTCAGGATCCGGTATTCGGAGAGAGCTTTCGTTTTCGCGTTGGTGTGACGACGATGATAATGATGGTGGTGATGGAAGGGTGATTTTGGATCAGAAATTAGGTGATGAGGATGTTATTGTAGAAGAAGACGCTGTTTTTGAGTTGCCTTTTGTTGAAAAGAATGTGGTGCAAGGAAGAGTTTTAGATAGGGAGAGATTTTCTTTTGATAAGTTTCGGAAGGAAAGGATCGTGCCGATGAATGGTGCTAGTACGATGGACGATGATTCTGTTTATAGGAGAGGTAATGGATCTGAGAAGTATGTGCCTTTTGATATTGAAGACAGTCCTGAAAGGGGAACAGTTGGTGGTGACTCGTATGATTCGGGGGGTGGTGTTGGATCACTGCATAAAAGCTCTGAAAATACTGTTCCTGTAGCAAATATATTGAAGACTATGTTTTTCATATTTGTGTGA
Protein sequence

>Msa1313280

MVHIELDSESCSFKGIAIDDFDSGSSGSGIRRELSFSRWCDDDDNDGGDGRVILDQKLGDEDVIVEEDAVFELPFVEKNVVQGRVLDRERFSFDKFRKERIVPMNGASTMDDDSVYRRGNGSEKYVPFDIEDSPERGTVGGDSYDSGGGVGSLHKSSENTVPVANILKTMFFIFV*