Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0927590 | RHN52866.1 | 97.966 | 639 | 13 | 0 | 1 | 639 | 54 | 692 | 0.0 | 1284 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0927590 | sp|Q94LW6|SUT35_ARATH | 61.342 | 626 | 233 | 3 | 10 | 633 | 15 | 633 | 0.0 | 787 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0128360 | Msa0927590 | 0.801255 | 9.817371e-49 | -8.615850e-47 |
| Msa0519150 | Msa0927590 | 0.803998 | 2.667653e-49 | -8.615850e-47 |
| Msa0899280 | Msa0927590 | 0.914875 | 1.146281e-84 | -8.615850e-47 |
| Msa0927590 | Msa0999010 | 0.966439 | 6.376278e-126 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0927590 | MtrunA17_Chr6g0485191 | 97.966 | 639 | 13 | 0 | 1 | 639 | 54 | 692 | 0.0 | 1284 |
| Msa0927590 | MtrunA17_Chr7g0260181 | 52.113 | 639 | 299 | 3 | 3 | 637 | 13 | 648 | 0.0 | 686 |
| Msa0927590 | MtrunA17_Chr1g0185231 | 51.724 | 638 | 301 | 4 | 3 | 636 | 15 | 649 | 0.0 | 678 |
| Msa0927590 | MtrunA17_Chr2g0331951 | 47.833 | 623 | 319 | 3 | 3 | 620 | 15 | 636 | 0.0 | 612 |
| Msa0927590 | MtrunA17_Chr4g0043931 | 46.215 | 634 | 335 | 4 | 6 | 636 | 16 | 646 | 0.0 | 600 |
| Msa0927590 | MtrunA17_Chr4g0004261 | 47.334 | 619 | 319 | 3 | 6 | 620 | 28 | 643 | 0.0 | 593 |
| Msa0927590 | MtrunA17_Chr5g0425251 | 44.586 | 628 | 342 | 3 | 5 | 627 | 25 | 651 | 0.0 | 582 |
| Msa0927590 | MtrunA17_Chr3g0115481 | 44.320 | 625 | 341 | 4 | 5 | 623 | 28 | 651 | 0.0 | 561 |
| Msa0927590 | MtrunA17_Chr4g0043951 | 51.163 | 516 | 251 | 1 | 21 | 536 | 33 | 547 | 0.0 | 556 |
| Msa0927590 | MtrunA17_Chr2g0278931 | 45.307 | 618 | 331 | 4 | 8 | 620 | 33 | 648 | 0.0 | 550 |
| Msa0927590 | MtrunA17_Chr5g0425241 | 43.067 | 613 | 337 | 5 | 23 | 623 | 34 | 646 | 6.97e-173 | 507 |
| Msa0927590 | MtrunA17_Chr3g0124381 | 42.978 | 591 | 327 | 5 | 42 | 624 | 62 | 650 | 1.61e-168 | 496 |
| Msa0927590 | MtrunA17_Chr3g0115461 | 42.288 | 577 | 319 | 6 | 60 | 623 | 77 | 652 | 1.89e-158 | 470 |
| Msa0927590 | MtrunA17_Chr3g0124371 | 35.167 | 600 | 372 | 8 | 42 | 624 | 57 | 656 | 4.89e-130 | 397 |
| Msa0927590 | MtrunA17_Chr7g0222631 | 35.702 | 591 | 366 | 9 | 52 | 636 | 67 | 649 | 5.00e-121 | 375 |
| Msa0927590 | MtrunA17_Chr1g0173031 | 49.345 | 229 | 110 | 2 | 6 | 234 | 28 | 250 | 9.78e-67 | 222 |
| Msa0927590 | MtrunA17_Chr1g0173031 | 55.789 | 95 | 42 | 0 | 294 | 388 | 250 | 344 | 5.64e-27 | 112 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0927590 | AT5G19600.1 | 61.342 | 626 | 233 | 3 | 10 | 633 | 15 | 633 | 0.0 | 787 |
| Msa0927590 | AT3G51895.1 | 54.416 | 634 | 281 | 4 | 5 | 631 | 13 | 645 | 0.0 | 733 |
| Msa0927590 | AT3G51895.2 | 54.416 | 634 | 281 | 4 | 5 | 631 | 58 | 690 | 0.0 | 733 |
| Msa0927590 | AT4G02700.1 | 50.627 | 638 | 311 | 2 | 1 | 634 | 1 | 638 | 0.0 | 653 |
| Msa0927590 | AT3G15990.1 | 48.470 | 621 | 313 | 3 | 4 | 620 | 23 | 640 | 0.0 | 613 |
| Msa0927590 | AT1G23090.1 | 47.742 | 620 | 316 | 4 | 6 | 620 | 2 | 618 | 0.0 | 592 |
| Msa0927590 | AT4G08620.1 | 46.569 | 612 | 321 | 3 | 17 | 623 | 30 | 640 | 0.0 | 572 |
| Msa0927590 | AT1G22150.1 | 44.640 | 625 | 332 | 4 | 12 | 627 | 33 | 652 | 0.0 | 541 |
| Msa0927590 | AT1G22150.3 | 44.640 | 625 | 332 | 4 | 12 | 627 | 33 | 652 | 0.0 | 541 |
| Msa0927590 | AT1G22150.4 | 44.640 | 625 | 332 | 4 | 12 | 627 | 33 | 652 | 0.0 | 541 |
| Msa0927590 | AT1G78000.2 | 45.923 | 601 | 319 | 3 | 28 | 623 | 46 | 645 | 0.0 | 533 |
| Msa0927590 | AT1G78000.1 | 45.923 | 601 | 319 | 3 | 28 | 623 | 46 | 645 | 0.0 | 533 |
| Msa0927590 | AT1G78000.3 | 45.923 | 601 | 319 | 3 | 28 | 623 | 46 | 645 | 0.0 | 533 |
| Msa0927590 | AT1G78000.5 | 46.181 | 563 | 297 | 3 | 28 | 585 | 46 | 607 | 3.11e-172 | 504 |
| Msa0927590 | AT1G22150.2 | 46.765 | 541 | 282 | 3 | 12 | 551 | 33 | 568 | 5.63e-172 | 503 |
| Msa0927590 | AT5G10180.1 | 42.978 | 591 | 326 | 5 | 42 | 623 | 84 | 672 | 1.26e-168 | 497 |
| Msa0927590 | AT1G78000.4 | 47.969 | 517 | 267 | 2 | 28 | 543 | 46 | 561 | 1.39e-166 | 489 |
| Msa0927590 | AT1G77990.1 | 40.981 | 571 | 326 | 4 | 60 | 620 | 94 | 663 | 3.28e-158 | 471 |
| Msa0927590 | AT1G23090.2 | 45.833 | 480 | 255 | 2 | 146 | 620 | 7 | 486 | 1.64e-148 | 439 |
| Msa0927590 | AT1G23090.3 | 45.833 | 480 | 255 | 2 | 146 | 620 | 7 | 486 | 1.64e-148 | 439 |
| Msa0927590 | AT1G23090.4 | 45.833 | 480 | 255 | 2 | 146 | 620 | 7 | 486 | 1.64e-148 | 439 |
| Msa0927590 | AT1G78000.6 | 48.132 | 455 | 234 | 2 | 28 | 481 | 46 | 499 | 3.20e-141 | 421 |
| Msa0927590 | AT1G78000.7 | 45.647 | 425 | 230 | 1 | 120 | 543 | 2 | 426 | 4.39e-127 | 383 |
| Msa0927590 | AT5G13550.1 | 33.981 | 618 | 388 | 11 | 29 | 637 | 47 | 653 | 2.10e-115 | 360 |
| Msa0927590 | AT3G12520.2 | 35.385 | 585 | 362 | 10 | 60 | 638 | 52 | 626 | 2.53e-115 | 359 |
| Msa0927590 | AT3G12520.1 | 35.385 | 585 | 362 | 10 | 60 | 638 | 68 | 642 | 5.78e-115 | 359 |
| Msa0927590 | AT3G12520.3 | 35.060 | 502 | 317 | 7 | 34 | 534 | 42 | 535 | 9.21e-97 | 307 |
Find 124 sgRNAs with CRISPR-Local
Find 467 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTACCATCACTGGCTTTA+TGG | 0.091737 | 6_2:+72022902 | Msa0927590:CDS |
| TCTTCCATAATTTGCCTAAA+AGG | 0.165537 | 6_2:-72021066 | None:intergenic |
| AACTGCTATTGAAGGATTAT+TGG | 0.199180 | 6_2:+72029034 | Msa0927590:CDS |
| CTTGGAAAGTTACCTGATTC+TGG | 0.227842 | 6_2:+72028303 | Msa0927590:CDS |
| GCCAATATCCATGCTTAAAA+AGG | 0.236226 | 6_2:-72027847 | None:intergenic |
| CCAACTACTACACATGTTAT+TGG | 0.237105 | 6_2:-72026003 | None:intergenic |
| GGAATCGTTCTATCTAAATT+TGG | 0.237542 | 6_2:+72029418 | Msa0927590:CDS |
| CATTTGTAGGCTTGGGATAT+TGG | 0.255298 | 6_2:+72022863 | Msa0927590:intron |
| TACAATGTTGGTTCTGTTAC+AGG | 0.256809 | 6_2:-72022111 | None:intergenic |
| AATAATCTCAAAGTATAATT+TGG | 0.268753 | 6_2:-72021153 | None:intergenic |
| GAGGAGAAGAGAAGTAATTT+TGG | 0.271705 | 6_2:-72029642 | None:intergenic |
| TTTGGCCTCATGAACTTGTT+TGG | 0.279571 | 6_2:+72026474 | Msa0927590:CDS |
| ATCATTGTATCTGCCATGTT+AGG | 0.283405 | 6_2:+72027738 | Msa0927590:CDS |
| TTTGTGACAAAACTGAAATC+TGG | 0.284226 | 6_2:+72021015 | Msa0927590:CDS |
| TCTACCATCACTGGCTTTAT+GGG | 0.290527 | 6_2:+72022903 | Msa0927590:CDS |
| ATTGGAAACAAAGAAAATAT+TGG | 0.294585 | 6_2:+72029052 | Msa0927590:CDS |
| CACTGCTATAACGTTGGTTT+TGG | 0.297397 | 6_2:-72022991 | None:intergenic |
| AGGAGGAAGATTGGCAAGTT+TGG | 0.298917 | 6_2:-72021241 | None:intergenic |
| AAACCCTAGGTTGGAGGTTA+TGG | 0.301154 | 6_2:+72029355 | Msa0927590:CDS |
| AAATCTCGTAGGTTGATTAA+AGG | 0.311993 | 6_2:+72021096 | Msa0927590:CDS |
| ATTGGAAATGAAAGCAATTC+AGG | 0.312773 | 6_2:+72029070 | Msa0927590:CDS |
| GTGCAAGAGATTCATCATAA+TGG | 0.322663 | 6_2:+72020967 | Msa0927590:CDS |
| TGCAAGAGATTCATCATAAT+GGG | 0.323918 | 6_2:+72020968 | Msa0927590:CDS |
| AATCTCGTAGGTTGATTAAA+GGG | 0.331148 | 6_2:+72021097 | Msa0927590:CDS |
| GCCAATCTTCCTCCTCTCAT+TGG | 0.336096 | 6_2:+72021249 | Msa0927590:CDS |
| AAGGTTGGAATGTGCAAATA+AGG | 0.346900 | 6_2:-72020850 | None:intergenic |
| AGATGGGAAACTACAGTTCT+TGG | 0.350067 | 6_2:+72025287 | Msa0927590:CDS |
| TATCTGCATGAGTGCATTCT+TGG | 0.353100 | 6_2:+72027818 | Msa0927590:CDS |
| GTCTTCATTATTGTTTGGCT+TGG | 0.354659 | 6_2:-72029480 | None:intergenic |
| GTAGAATTTGAAAAGTAAAT+AGG | 0.362141 | 6_2:-72028399 | None:intergenic |
| TTTGGTAACCACTCAAAGAT+TGG | 0.364192 | 6_2:-72021135 | None:intergenic |
| AAAAGTGAACAAATCAGTTC+TGG | 0.368002 | 6_2:+72028560 | Msa0927590:CDS |
| AACAAAGAGATGATAGCTTT+TGG | 0.372125 | 6_2:+72026456 | Msa0927590:CDS |
| TCTAATGCTTCAACAATTCC+AGG | 0.372816 | 6_2:+72028351 | Msa0927590:CDS |
| ATTTGCCTAAAAGGATCATC+AGG | 0.384081 | 6_2:-72021057 | None:intergenic |
| GTTGGACTAGGTTTACTTAG+AGG | 0.389651 | 6_2:+72028246 | Msa0927590:CDS |
| TAATTAATTACCTTTCTTTG+AGG | 0.391511 | 6_2:-72028425 | None:intergenic |
| ACAGTGTCTTCATTATTGTT+TGG | 0.392452 | 6_2:-72029485 | None:intergenic |
| TTCACAGCCGTCTTGGAAAA+TGG | 0.392750 | 6_2:-72027597 | None:intergenic |
| TGTGGTTCAAGCAGTAATAA+TGG | 0.397620 | 6_2:+72027653 | Msa0927590:CDS |
| GTCAGATATTGAATTGATAT+AGG | 0.399696 | 6_2:-72026218 | None:intergenic |
| AAGTGTGTACAACCTAGTTT+TGG | 0.414861 | 6_2:-72029552 | None:intergenic |
| ATTGACACAACTGCTATTGA+AGG | 0.423273 | 6_2:+72029026 | Msa0927590:CDS |
| GATACTAACCTCATGTCTAT+TGG | 0.426004 | 6_2:-72023030 | None:intergenic |
| AGGTGTTGTATTATTAAGGT+TGG | 0.440488 | 6_2:-72020865 | None:intergenic |
| TCATTGTATCTGCCATGTTA+GGG | 0.442300 | 6_2:+72027739 | Msa0927590:CDS |
| CTCCTCATACTTGAAGCATA+TGG | 0.442928 | 6_2:+72029659 | Msa0927590:three_prime_UTR |
| TGCCATATGCTTCAAGTATG+AGG | 0.451478 | 6_2:-72029661 | None:intergenic |
| GCCAATGAGAGGAGGAAGAT+TGG | 0.452640 | 6_2:-72021250 | None:intergenic |
| TCTCATCCTCCAACAATTCA+AGG | 0.453577 | 6_2:+72022941 | Msa0927590:CDS |
| TCTCTGTATAAACCAGAATC+AGG | 0.455645 | 6_2:-72028315 | None:intergenic |
| TAAAGCCAGTGATGGTAGAA+TGG | 0.458267 | 6_2:-72022899 | None:intergenic |
| TTGTGACAAAACTGAAATCT+GGG | 0.460516 | 6_2:+72021016 | Msa0927590:CDS |
| ATCTGCATGAGTGCATTCTT+GGG | 0.460576 | 6_2:+72027819 | Msa0927590:CDS |
| ACAAATCAGTTCTGGAGATA+TGG | 0.462184 | 6_2:+72028568 | Msa0927590:CDS |
| CTTGCAATTTACAAGGCACT+TGG | 0.472344 | 6_2:+72025328 | Msa0927590:CDS |
| ACTTGTATAATTAGAACTCC+TGG | 0.472930 | 6_2:-72028369 | None:intergenic |
| AGTGGTGTGTTGCTAAATAA+TGG | 0.482061 | 6_2:-72027699 | None:intergenic |
| TTCACGACAACCTTTATCAC+TGG | 0.484749 | 6_2:+72022147 | Msa0927590:CDS |
| AAACTAGGTTGTACACACTT+TGG | 0.491155 | 6_2:+72029555 | Msa0927590:three_prime_UTR |
| GGAGTTCTAATTATACAAGT+TGG | 0.491780 | 6_2:+72028372 | Msa0927590:CDS |
| TTTGCAATCTAGGTTGGACT+AGG | 0.497605 | 6_2:+72028234 | Msa0927590:intron |
| AAAGCCAGTGATGGTAGAAT+GGG | 0.500955 | 6_2:-72022898 | None:intergenic |
| CTCTAGCACTGCTATAACGT+TGG | 0.504485 | 6_2:-72022997 | None:intergenic |
| AGACCACCAGCATGCAAGCT+TGG | 0.506725 | 6_2:+72028285 | Msa0927590:CDS |
| GTTCTAGGCACATGGCAGTT+GGG | 0.507091 | 6_2:+72022034 | Msa0927590:CDS |
| ACTTATCAACTTTAAAGAGA+TGG | 0.509202 | 6_2:-72027785 | None:intergenic |
| CTTAGTAAACCCTAGGTTGG+AGG | 0.511054 | 6_2:+72029349 | Msa0927590:CDS |
| ATTCTACATACCTCAAAGAA+AGG | 0.514031 | 6_2:+72028415 | Msa0927590:CDS |
| ATCTCTTTGTTCCCATCATG+AGG | 0.518610 | 6_2:-72026444 | None:intergenic |
| AGTTCTAGGCACATGGCAGT+TGG | 0.522267 | 6_2:+72022033 | Msa0927590:CDS |
| CATGAGTGCATTCTTGGGTG+TGG | 0.523931 | 6_2:+72027824 | Msa0927590:CDS |
| AACTTTCCAAGCTTGCATGC+TGG | 0.527389 | 6_2:-72028291 | None:intergenic |
| AAATTTGGAAGATGCAGTGT+TGG | 0.527724 | 6_2:+72029433 | Msa0927590:CDS |
| TTATCAACAGTAATGAAAGC+TGG | 0.530131 | 6_2:+72026257 | Msa0927590:CDS |
| AAATACCCTTGAATTGTTGG+AGG | 0.536645 | 6_2:-72022947 | None:intergenic |
| TTTCCAAGCTTGCATGCTGG+TGG | 0.538810 | 6_2:-72028288 | None:intergenic |
| CTCCAACCTAGGGTTTACTA+AGG | 0.544948 | 6_2:-72029348 | None:intergenic |
| ACTGCTAATACACCTCATGA+TGG | 0.545862 | 6_2:+72026432 | Msa0927590:CDS |
| CTTGTGAAAGGTACACAACA+TGG | 0.546175 | 6_2:+72026042 | Msa0927590:CDS |
| TTCTCCATAACCTCCAACCT+AGG | 0.548321 | 6_2:-72029359 | None:intergenic |
| GGCCTTAGTAAACCCTAGGT+TGG | 0.549563 | 6_2:+72029346 | Msa0927590:CDS |
| ATAACTAATGCCTTGAGGAA+TGG | 0.551773 | 6_2:-72021217 | None:intergenic |
| ATAACATGTGTAGTAGTTGG+TGG | 0.555611 | 6_2:+72026006 | Msa0927590:CDS |
| CATGTTGTGTACCTTTCACA+AGG | 0.555977 | 6_2:-72026041 | None:intergenic |
| ATCAAGTGAAGATACAATGT+TGG | 0.557565 | 6_2:-72022123 | None:intergenic |
| TCTCCATAACCTCCAACCTA+GGG | 0.557732 | 6_2:-72029358 | None:intergenic |
| CCAATAACATGTGTAGTAGT+TGG | 0.558610 | 6_2:+72026003 | Msa0927590:CDS |
| ACCATCACTGGCTTTATGGG+AGG | 0.561154 | 6_2:+72022906 | Msa0927590:CDS |
| GCTAGTCTTGCCATTCCTCA+AGG | 0.563153 | 6_2:+72021207 | Msa0927590:CDS |
| ATTGTAATTCACAGCCGTCT+TGG | 0.564494 | 6_2:-72027604 | None:intergenic |
| TGATAAATATCTTCTATCAA+AGG | 0.566348 | 6_2:-72026240 | None:intergenic |
| CTGCTAATACACCTCATGAT+GGG | 0.571207 | 6_2:+72026433 | Msa0927590:CDS |
| TTGTAAATTGCAAGAAAACA+AGG | 0.572872 | 6_2:-72025319 | None:intergenic |
| ACAATGTTGGTTCTGTTACA+GGG | 0.576689 | 6_2:-72022110 | None:intergenic |
| ACATCATGTTACTTGACTAG+TGG | 0.580545 | 6_2:+72026504 | Msa0927590:CDS |
| CAGTGGAGTATTGTCATTAG+CGG | 0.582868 | 6_2:+72026286 | Msa0927590:CDS |
| GCAGATACCCAAAAGAGTTG+TGG | 0.585327 | 6_2:-72025973 | None:intergenic |
| AGGAATGGCAAGACTAGCAA+TGG | 0.591507 | 6_2:-72021202 | None:intergenic |
| CAACGTTATAGCAGTGCTAG+AGG | 0.597307 | 6_2:+72022998 | Msa0927590:CDS |
| AGATGGCCTTAGTAAACCCT+AGG | 0.598373 | 6_2:+72029342 | Msa0927590:intron |
| ATGTAGGAAGGAATAGCCAT+AGG | 0.601997 | 6_2:+72026393 | Msa0927590:intron |
| ATCTCGTAGGTTGATTAAAG+GGG | 0.603398 | 6_2:+72021098 | Msa0927590:CDS |
| CCCTCCCATAAAGCCAGTGA+TGG | 0.605304 | 6_2:-72022907 | None:intergenic |
| CCATCACTGGCTTTATGGGA+GGG | 0.606512 | 6_2:+72022907 | Msa0927590:CDS |
| CTCATCCTCCAACAATTCAA+GGG | 0.613502 | 6_2:+72022942 | Msa0927590:CDS |
| ACGGCTGTGAATTACAATGC+AGG | 0.613947 | 6_2:+72027609 | Msa0927590:CDS |
| AAGATCCAAACAAGTTCATG+AGG | 0.614928 | 6_2:-72026479 | None:intergenic |
| TACATTAATAAACCAAAACT+AGG | 0.621123 | 6_2:+72029540 | Msa0927590:three_prime_UTR |
| ATGAAAGCTGGACTAATCAG+TGG | 0.624504 | 6_2:+72026269 | Msa0927590:CDS |
| AACGTTATAGCAGTGCTAGA+GGG | 0.625688 | 6_2:+72022999 | Msa0927590:CDS |
| GACTTACAAAGGCCAATGAG+AGG | 0.626933 | 6_2:-72021261 | None:intergenic |
| ATAATTTATCAACCCTAACA+TGG | 0.629736 | 6_2:-72027751 | None:intergenic |
| CATCTTTACCAATAGACATG+AGG | 0.630254 | 6_2:+72023022 | Msa0927590:CDS |
| GAGTACTCACAGAGAGCATG+AGG | 0.634898 | 6_2:-72027869 | None:intergenic |
| AAAACAGCATACACTAGTGG+TGG | 0.646156 | 6_2:-72022006 | None:intergenic |
| TTGGCATAACTAATGCCTTG+AGG | 0.647323 | 6_2:-72021222 | None:intergenic |
| GTGAACTTATCAACCCAAAG+AGG | 0.656250 | 6_2:+72020991 | Msa0927590:CDS |
| TTTGCCTAAAAGGATCATCA+GGG | 0.658092 | 6_2:-72021056 | None:intergenic |
| TTACAAAGGCCAATGAGAGG+AGG | 0.669733 | 6_2:-72021258 | None:intergenic |
| ATAGCTGATAGAGCAACAAG+TGG | 0.676923 | 6_2:-72027717 | None:intergenic |
| TAGGTGGGACATCTAGACAA+AGG | 0.681215 | 6_2:+72026188 | Msa0927590:intron |
| GCAAGAGATTCATCATAATG+GGG | 0.683072 | 6_2:+72020969 | Msa0927590:CDS |
| TAAATCTGCAATGACAAATG+TGG | 0.698801 | 6_2:+72027635 | Msa0927590:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATATATATATATATAAA+TGG | + | chr6_2:72024040-72024059 | Msa0927590:intron | 0.0% |
| !! | AAAATTAAGAAAAATAACAT+AGG | - | chr6_2:72021894-72021913 | None:intergenic | 10.0% |
| !!! | TTTATCTTAATTTTTGAAAT+TGG | + | chr6_2:72021913-72021932 | Msa0927590:intron | 10.0% |
| !! | ATTAAATAATATCAGATTTA+AGG | + | chr6_2:72022609-72022628 | Msa0927590:intron | 10.0% |
| !!! | TAAATCACTTTTTTTTTATA+AGG | + | chr6_2:72023181-72023200 | Msa0927590:intron | 10.0% |
| !!! | AAATCACTTTTTTTTTATAA+GGG | + | chr6_2:72023182-72023201 | Msa0927590:intron | 10.0% |
| !!! | TACTGATTTTTAAATAATAA+TGG | + | chr6_2:72023205-72023224 | Msa0927590:intron | 10.0% |
| !! | AAATAAATAAGAAAAATGTT+TGG | - | chr6_2:72023482-72023501 | None:intergenic | 10.0% |
| !!! | ACATTTTTCTTATTTATTTA+AGG | + | chr6_2:72023483-72023502 | Msa0927590:intron | 10.0% |
| !!! | TGTGATAATTTTTTTTTTTA+AGG | + | chr6_2:72024101-72024120 | Msa0927590:intron | 10.0% |
| !! | ATATTTGATTCAAAAAAAAA+AGG | + | chr6_2:72024802-72024821 | Msa0927590:intron | 10.0% |
| !! | TTGATAAAAAATGTTAATTA+TGG | - | chr6_2:72026349-72026368 | None:intergenic | 10.0% |
| !!! | TTTTTTTTATATGTATATGT+AGG | + | chr6_2:72026377-72026396 | Msa0927590:intron | 10.0% |
| !!! | TAGTTTTAAAAGTAATATTT+TGG | + | chr6_2:72027199-72027218 | Msa0927590:intron | 10.0% |
| !! | AATTAATATGTATATATCAA+TGG | - | chr6_2:72028490-72028509 | None:intergenic | 10.0% |
| !! | AATAATCTCAAAGTATAATT+TGG | - | chr6_2:72021156-72021175 | None:intergenic | 15.0% |
| !! | ATTATAAAAATGACTTACAA+AGG | - | chr6_2:72021275-72021294 | None:intergenic | 15.0% |
| !! | AAAAAAAATCTGATTTAGTA+TGG | - | chr6_2:72023124-72023143 | None:intergenic | 15.0% |
| !!! | AATCAGATTTTTTTTTTTGA+AGG | + | chr6_2:72023129-72023148 | Msa0927590:intron | 15.0% |
| !! | TATTTCAATAAAAATGTTAG+TGG | + | chr6_2:72023832-72023851 | Msa0927590:intron | 15.0% |
| !!! | TTTTTAAAAATTGTTTTGCA+AGG | - | chr6_2:72023906-72023925 | None:intergenic | 15.0% |
| !!! | TTTTTGTTTCTTTTGTTTTT+AGG | + | chr6_2:72024135-72024154 | Msa0927590:intron | 15.0% |
| !!! | TTTTGTTTCTTTTGTTTTTA+GGG | + | chr6_2:72024136-72024155 | Msa0927590:intron | 15.0% |
| !! | AAATAAATCAAATTATTACG+TGG | - | chr6_2:72024195-72024214 | None:intergenic | 15.0% |
| !! | ACTATATTTATAAGCAATAA+AGG | - | chr6_2:72024447-72024466 | None:intergenic | 15.0% |
| !! | ATATTTGCTTCATAAAAAAA+AGG | + | chr6_2:72024692-72024711 | Msa0927590:intron | 15.0% |
| !!! | TTTTGAATATAATTTTTCAG+AGG | + | chr6_2:72025941-72025960 | Msa0927590:intron | 15.0% |
| !!! | TTTGAATATAATTTTTCAGA+GGG | + | chr6_2:72025942-72025961 | Msa0927590:intron | 15.0% |
| !! | GACTATTAGTATATAAAAAA+GGG | - | chr6_2:72026710-72026729 | None:intergenic | 15.0% |
| !! | TGACTATTAGTATATAAAAA+AGG | - | chr6_2:72026711-72026730 | None:intergenic | 15.0% |
| !!! | AAATGTATGATTTTCTTTTA+GGG | + | chr6_2:72026974-72026993 | Msa0927590:intron | 15.0% |
| !! | AATAGTTAATAAGGATAATT+TGG | - | chr6_2:72027176-72027195 | None:intergenic | 15.0% |
| !! | AAATTATCCTTATTAACTAT+TGG | + | chr6_2:72027175-72027194 | Msa0927590:intron | 15.0% |
| !!! | CATTTTGAAACAAATTTTTT+TGG | + | chr6_2:72027302-72027321 | Msa0927590:intron | 15.0% |
| !!! | TTTTTTATTACTAAATGTAG+TGG | - | chr6_2:72029139-72029158 | None:intergenic | 15.0% |
| !! | ATATTAAAGATGAATTACAA+AGG | - | chr6_2:72029114-72029133 | None:intergenic | 15.0% |
| !!! | AAGTTAAAATTTTCATTTAG+TGG | - | chr6_2:72029290-72029309 | None:intergenic | 15.0% |
| !!! | AAAAAGGTGTTGTATTATTA+AGG | - | chr6_2:72020872-72020891 | None:intergenic | 20.0% |
| !!! | AAAAAGGTGTTGTATTAAAA+AGG | - | chr6_2:72020888-72020907 | None:intergenic | 20.0% |
| !! | ACATTCATTCTTAATTACTT+CGG | + | chr6_2:72021301-72021320 | Msa0927590:intron | 20.0% |
| !!! | TTCGATTATGTAATTTGTTT+TGG | + | chr6_2:72021454-72021473 | Msa0927590:intron | 20.0% |
| !!! | TCTCAATTGTTATTATATCA+CGG | + | chr6_2:72021523-72021542 | Msa0927590:intron | 20.0% |
| !! | ATAAAGTTTAACAATGAGAT+CGG | - | chr6_2:72021664-72021683 | None:intergenic | 20.0% |
| !! | TAGAGTCAAATAGATATTTA+AGG | + | chr6_2:72021741-72021760 | Msa0927590:intron | 20.0% |
| !! | AGAGTCAAATAGATATTTAA+GGG | + | chr6_2:72021742-72021761 | Msa0927590:intron | 20.0% |
| !! | CAAATAAGAACAATAACTAT+AGG | + | chr6_2:72021838-72021857 | Msa0927590:intron | 20.0% |
| !! | AATAACATAGGATTTGAATA+CGG | - | chr6_2:72021882-72021901 | None:intergenic | 20.0% |
| !!! | AGTGATTTTGATTTGATTTT+TGG | + | chr6_2:72021951-72021970 | Msa0927590:intron | 20.0% |
| !! | AAGTAATTATCTATGAAACA+CGG | - | chr6_2:72022439-72022458 | None:intergenic | 20.0% |
| !! | AAAAAAAAAGTGATTTAGCA+TGG | - | chr6_2:72023178-72023197 | None:intergenic | 20.0% |
| !!! | TAGTTTTTGTAAAATCATTG+TGG | - | chr6_2:72023340-72023359 | None:intergenic | 20.0% |
| !! | TTAGTGAATGTTAGATATTA+CGG | - | chr6_2:72023432-72023451 | None:intergenic | 20.0% |
| !! | AAATGGATATGTAATCTTAA+AGG | - | chr6_2:72023801-72023820 | None:intergenic | 20.0% |
| !! | GAAATATAGTTGATCTAAAA+TGG | - | chr6_2:72023818-72023837 | None:intergenic | 20.0% |
| !!! | ATGTGATAGTTTTATTTTCA+TGG | + | chr6_2:72024163-72024182 | Msa0927590:intron | 20.0% |
| !!! | TGTGATAGTTTTATTTTCAT+GGG | + | chr6_2:72024164-72024183 | Msa0927590:intron | 20.0% |
| !! | GTAATAAAAAAACGAAAAGA+CGG | - | chr6_2:72024280-72024299 | None:intergenic | 20.0% |
| !! | GTAACAAACAAAATTGTTTA+AGG | + | chr6_2:72024389-72024408 | Msa0927590:intron | 20.0% |
| !!! | TATAAGCAATAAAGGATTTT+AGG | - | chr6_2:72024439-72024458 | None:intergenic | 20.0% |
| !!! | CAAATATTTTCTACACTTTT+AGG | - | chr6_2:72024789-72024808 | None:intergenic | 20.0% |
| !! | TTTGATTCAAAAAAAAAAGG+AGG | + | chr6_2:72024805-72024824 | Msa0927590:intron | 20.0% |
| !!! | ATTTGTTAGGTTCAAAAATA+TGG | + | chr6_2:72024839-72024858 | Msa0927590:intron | 20.0% |
| !!! | TATCAAGTTTGCTATAATTT+TGG | - | chr6_2:72024875-72024894 | None:intergenic | 20.0% |
| !!! | CTCACAAATATCTATTTTAA+GGG | - | chr6_2:72025176-72025195 | None:intergenic | 20.0% |
| !!! | TCTCACAAATATCTATTTTA+AGG | - | chr6_2:72025177-72025196 | None:intergenic | 20.0% |
| !!! | TAACTATATACTTTTATGTG+TGG | + | chr6_2:72025221-72025240 | Msa0927590:intron | 20.0% |
| !!! | CATATTTTATTCATAGTTTG+TGG | - | chr6_2:72025516-72025535 | None:intergenic | 20.0% |
| !! | CACAAACTATGAATAAAATA+TGG | + | chr6_2:72025514-72025533 | Msa0927590:intron | 20.0% |
| !! | TACATGTAAAATATTGCTAT+TGG | - | chr6_2:72025542-72025561 | None:intergenic | 20.0% |
| !! | TCCTATTAGATTAAGATATT+CGG | + | chr6_2:72025584-72025603 | Msa0927590:intron | 20.0% |
| !! | ATAAGATACTAAGAAATTGA+AGG | - | chr6_2:72026108-72026127 | None:intergenic | 20.0% |
| !! | TTTGATGTTTATACATATGT+AGG | + | chr6_2:72026169-72026188 | Msa0927590:intron | 20.0% |
| !! | TGATAAATATCTTCTATCAA+AGG | - | chr6_2:72026243-72026262 | None:intergenic | 20.0% |
| !!! | TTTTATATGTATATGTAGGA+AGG | + | chr6_2:72026381-72026400 | Msa0927590:intron | 20.0% |
| !! | TATATACTAAGTATAAGACT+TGG | + | chr6_2:72026550-72026569 | Msa0927590:intron | 20.0% |
| !! | TATTAGTATATAAAAAAGGG+TGG | - | chr6_2:72026707-72026726 | None:intergenic | 20.0% |
| !!! | CTAAATATTTTGTATTTGAG+GGG | - | chr6_2:72026810-72026829 | None:intergenic | 20.0% |
| !!! | GCTAAATATTTTGTATTTGA+GGG | - | chr6_2:72026811-72026830 | None:intergenic | 20.0% |
| !!! | TGCTAAATATTTTGTATTTG+AGG | - | chr6_2:72026812-72026831 | None:intergenic | 20.0% |
| !! | TTTAGCAATGATATTAGAAA+AGG | + | chr6_2:72026825-72026844 | Msa0927590:intron | 20.0% |
| !! | TTAGCAATGATATTAGAAAA+GGG | + | chr6_2:72026826-72026845 | Msa0927590:intron | 20.0% |
| !!! | CAAATGTATGATTTTCTTTT+AGG | + | chr6_2:72026973-72026992 | Msa0927590:intron | 20.0% |
| !! | AATGATTAAAAGAAAGAGAA+TGG | + | chr6_2:72027142-72027161 | Msa0927590:intron | 20.0% |
| !! | AAACTAACCAATAGTTAATA+AGG | - | chr6_2:72027185-72027204 | None:intergenic | 20.0% |
| !! | AGAAAAAGTTATTATTGCAT+TGG | + | chr6_2:72027262-72027281 | Msa0927590:intron | 20.0% |
| !! | TATTGTATACTGATATACTT+AGG | + | chr6_2:72027553-72027572 | Msa0927590:intron | 20.0% |
| !!! | CGTTAATTTAACTCTTTTTA+GGG | - | chr6_2:72027932-72027951 | None:intergenic | 20.0% |
| !!! | TCGTTAATTTAACTCTTTTT+AGG | - | chr6_2:72027933-72027952 | None:intergenic | 20.0% |
| !! | TTTATATGTATTTGCAATCT+AGG | + | chr6_2:72028224-72028243 | Msa0927590:intron | 20.0% |
| !! | GTAGAATTTGAAAAGTAAAT+AGG | - | chr6_2:72028402-72028421 | None:intergenic | 20.0% |
| !! | TAATTAATTACCTTTCTTTG+AGG | - | chr6_2:72028428-72028447 | None:intergenic | 20.0% |
| !!! | TTTTCTTAAAATTGTGCAAT+AGG | + | chr6_2:72028522-72028541 | Msa0927590:intron | 20.0% |
| !! | ATAAGCATACAAAAGAAAAA+GGG | - | chr6_2:72028991-72029010 | None:intergenic | 20.0% |
| !! | TATAAGCATACAAAAGAAAA+AGG | - | chr6_2:72028992-72029011 | None:intergenic | 20.0% |
| !! | ATTGGAAACAAAGAAAATAT+TGG | + | chr6_2:72029052-72029071 | Msa0927590:CDS | 20.0% |
| !!! | GTTTTTATTACTAAATGTAG+TGG | - | chr6_2:72029196-72029215 | None:intergenic | 20.0% |
| !!! | TCAAAGTTTGTTGAAAAAAT+TGG | + | chr6_2:72029392-72029411 | Msa0927590:CDS | 20.0% |
| !!! | CAAAGTTTGTTGAAAAAATT+GGG | + | chr6_2:72029393-72029412 | Msa0927590:CDS | 20.0% |
| !! | TACATTAATAAACCAAAACT+AGG | + | chr6_2:72029540-72029559 | Msa0927590:three_prime_UTR | 20.0% |
| ! | ACATACACAAAAACACAAAA+AGG | - | chr6_2:72020904-72020923 | None:intergenic | 25.0% |
| !! | TCTACACAAAATTTTCTTGA+TGG | + | chr6_2:72020939-72020958 | Msa0927590:exon | 25.0% |
| !! | ATTTTATTCCAATCTTTGAG+TGG | + | chr6_2:72021127-72021146 | Msa0927590:CDS | 25.0% |
| ! | ACATGAGAATCAAAATACTA+CGG | - | chr6_2:72021392-72021411 | None:intergenic | 25.0% |
| ! | GAGTCAAATAGATATTTAAG+GGG | + | chr6_2:72021743-72021762 | Msa0927590:intron | 25.0% |
| !! | GTTATTGTTGTTATTCTTCT+TGG | - | chr6_2:72021809-72021828 | None:intergenic | 25.0% |
| ! | CTTATAAAACGTTAACACAT+TGG | + | chr6_2:72022456-72022475 | Msa0927590:intron | 25.0% |
| ! | ACTAATACAAATTACGATGA+AGG | + | chr6_2:72022649-72022668 | Msa0927590:intron | 25.0% |
| ! | TGACTGATCAAAATAATAAG+AGG | + | chr6_2:72023091-72023110 | Msa0927590:intron | 25.0% |
| ! | AAGTGAAAAATATCACAGTA+GGG | + | chr6_2:72023294-72023313 | Msa0927590:intron | 25.0% |
| ! | ACAATAAAAATGAGTGTTAG+TGG | + | chr6_2:72023760-72023779 | Msa0927590:intron | 25.0% |
| ! | GTTAGTGGCTTAAAAAAAAA+AGG | + | chr6_2:72023775-72023794 | Msa0927590:intron | 25.0% |
| ! | ATAAATGGAAAAGATTCGTT+AGG | + | chr6_2:72024055-72024074 | Msa0927590:intron | 25.0% |
| ! | CAACAACTTGTCAAAAAATT+CGG | + | chr6_2:72024519-72024538 | Msa0927590:intron | 25.0% |
| ! | GATCAATTGCTAAAATTGAA+TGG | + | chr6_2:72024559-72024578 | Msa0927590:intron | 25.0% |
| ! | AAAAATGTGGGAAAGATATT+AGG | + | chr6_2:72024624-72024643 | Msa0927590:intron | 25.0% |
| ! | AAAATGTGGGAAAGATATTA+GGG | + | chr6_2:72024625-72024644 | Msa0927590:intron | 25.0% |
| ! | TAAAAAAAAGGCAAGAAGAT+AGG | + | chr6_2:72024704-72024723 | Msa0927590:intron | 25.0% |
| ! | CAAGAAGATAGGAATAAAAT+TGG | + | chr6_2:72024715-72024734 | Msa0927590:intron | 25.0% |
| !! | GGATATGAATGAAATTTGTT+AGG | + | chr6_2:72024826-72024845 | Msa0927590:intron | 25.0% |
| ! | TAGGTTCAAAAATATGGATT+CGG | + | chr6_2:72024845-72024864 | Msa0927590:intron | 25.0% |
| !! | GCAAACTTGATAACAAAATT+CGG | + | chr6_2:72024883-72024902 | Msa0927590:intron | 25.0% |
| !! | TTTTATGTGTGGAAATAACA+CGG | + | chr6_2:72025232-72025251 | Msa0927590:intron | 25.0% |
| !!! | TGCTATTTTAACAGATAAGA+TGG | + | chr6_2:72025270-72025289 | Msa0927590:intron | 25.0% |
| !!! | GCTATTTTAACAGATAAGAT+GGG | + | chr6_2:72025271-72025290 | Msa0927590:intron | 25.0% |
| ! | TTGTAAATTGCAAGAAAACA+AGG | - | chr6_2:72025322-72025341 | None:intergenic | 25.0% |
| !! | TTGTTTTCTTGCAATTTACA+AGG | + | chr6_2:72025321-72025340 | Msa0927590:CDS | 25.0% |
| ! | GATTAGAAGAACATAGAAAA+AGG | + | chr6_2:72025425-72025444 | Msa0927590:intron | 25.0% |
| ! | ACCGAATATCTTAATCTAAT+AGG | - | chr6_2:72025588-72025607 | None:intergenic | 25.0% |
| ! | ATATGCTTTCTTGTAGATAA+GGG | - | chr6_2:72025864-72025883 | None:intergenic | 25.0% |
| !! | TTAAAAAACCACAACTCTTT+TGG | + | chr6_2:72025965-72025984 | Msa0927590:CDS | 25.0% |
| !! | TAAAAAACCACAACTCTTTT+GGG | + | chr6_2:72025966-72025985 | Msa0927590:CDS | 25.0% |
| ! | ATGTTTATACATATGTAGGT+GGG | + | chr6_2:72026173-72026192 | Msa0927590:intron | 25.0% |
| ! | GTCAGATATTGAATTGATAT+AGG | - | chr6_2:72026221-72026240 | None:intergenic | 25.0% |
| ! | CATGAGATGAAATTCATATA+GGG | - | chr6_2:72026666-72026685 | None:intergenic | 25.0% |
| ! | CTATATGAATTTCATCTCAT+GGG | + | chr6_2:72026665-72026684 | Msa0927590:intron | 25.0% |
| !!! | ATCGTTTTTTCACATCATTT+TGG | + | chr6_2:72026919-72026938 | Msa0927590:intron | 25.0% |
| !!! | TATCTTTTTTCAGGTCATTT+TGG | - | chr6_2:72027061-72027080 | None:intergenic | 25.0% |
| !!! | CTGTCGTTTAACTTAATTTT+AGG | - | chr6_2:72027378-72027397 | None:intergenic | 25.0% |
| ! | AAATTAAGTTAAACGACAGA+CGG | + | chr6_2:72027379-72027398 | Msa0927590:intron | 25.0% |
| !! | ATATCTCAACTCTATTTTCT+AGG | - | chr6_2:72027419-72027438 | None:intergenic | 25.0% |
| !! | AATAGAGTTGAGATATTTTC+AGG | + | chr6_2:72027423-72027442 | Msa0927590:intron | 25.0% |
| !! | AATGAAGATTTTTATGTCGA+AGG | - | chr6_2:72027534-72027553 | None:intergenic | 25.0% |
| !!! | AGGCTTAAATTGATTTTTGT+AGG | + | chr6_2:72027573-72027592 | Msa0927590:intron | 25.0% |
| ! | ATAATTTATCAACCCTAACA+TGG | - | chr6_2:72027754-72027773 | None:intergenic | 25.0% |
| !! | ACTTATCAACTTTAAAGAGA+TGG | - | chr6_2:72027788-72027807 | None:intergenic | 25.0% |
| ! | TTTATTCTCTCACTTCTATT+AGG | + | chr6_2:72027894-72027913 | Msa0927590:intron | 25.0% |
| !!! | TTTAACTCTTTTTAGGGTTA+GGG | - | chr6_2:72027926-72027945 | None:intergenic | 25.0% |
| !!! | ATTTAACTCTTTTTAGGGTT+AGG | - | chr6_2:72027927-72027946 | None:intergenic | 25.0% |
| ! | TCTAATTTCTATCATGAAGA+TGG | + | chr6_2:72028044-72028063 | Msa0927590:intron | 25.0% |
| !!! | ATCATGAAATCAACGTTTTT+TGG | + | chr6_2:72028147-72028166 | Msa0927590:intron | 25.0% |
| !!! | ATCAATGGATTATCATTAGA+TGG | - | chr6_2:72028475-72028494 | None:intergenic | 25.0% |
| ! | ACACACATAATAAAACAACA+AGG | - | chr6_2:72028649-72028668 | None:intergenic | 25.0% |
| ! | CTACCATATTATTATACAGA+TGG | + | chr6_2:72029325-72029344 | Msa0927590:intron | 25.0% |
| !! | TTGTATAACGCTACATTTTA+TGG | + | chr6_2:72029602-72029621 | Msa0927590:three_prime_UTR | 25.0% |
| ! | AGGTGTTGTATTATTAAGGT+TGG | - | chr6_2:72020868-72020887 | None:intergenic | 30.0% |
| TGCAAGAGATTCATCATAAT+GGG | + | chr6_2:72020968-72020987 | Msa0927590:CDS | 30.0% | |
| ! | TTTTGTCACAAAACCTCTTT+GGG | - | chr6_2:72021007-72021026 | None:intergenic | 30.0% |
| TTTGTGACAAAACTGAAATC+TGG | + | chr6_2:72021015-72021034 | Msa0927590:CDS | 30.0% | |
| TTGTGACAAAACTGAAATCT+GGG | + | chr6_2:72021016-72021035 | Msa0927590:CDS | 30.0% | |
| ! | TGATCCTTTTAGGCAAATTA+TGG | + | chr6_2:72021062-72021081 | Msa0927590:CDS | 30.0% |
| ! | TCTTCCATAATTTGCCTAAA+AGG | - | chr6_2:72021069-72021088 | None:intergenic | 30.0% |
| ! | TTTTAGGCAAATTATGGAAG+AGG | + | chr6_2:72021068-72021087 | Msa0927590:CDS | 30.0% |
| AAGAGGAAAAAAAATCTCGT+AGG | + | chr6_2:72021085-72021104 | Msa0927590:CDS | 30.0% | |
| !! | AAATCTCGTAGGTTGATTAA+AGG | + | chr6_2:72021096-72021115 | Msa0927590:CDS | 30.0% |
| !! | AATCTCGTAGGTTGATTAAA+GGG | + | chr6_2:72021097-72021116 | Msa0927590:CDS | 30.0% |
| ! | TTTTTCTCTGACTTAATTGC+TGG | + | chr6_2:72021174-72021193 | Msa0927590:CDS | 30.0% |
| CATGAGAATCAAAATACTAC+GGG | - | chr6_2:72021391-72021410 | None:intergenic | 30.0% | |
| CAATTGAGAGTAGTATATCT+CGG | - | chr6_2:72021512-72021531 | None:intergenic | 30.0% | |
| TTATTATATCACGGTAAGAG+AGG | + | chr6_2:72021532-72021551 | Msa0927590:intron | 30.0% | |
| TATTATATCACGGTAAGAGA+GGG | + | chr6_2:72021533-72021552 | Msa0927590:intron | 30.0% | |
| ! | TCTCGTTTTACCCTTTTTAA+TGG | + | chr6_2:72021583-72021602 | Msa0927590:intron | 30.0% |
| TAAAGAGGAAATTGGATTTC+CGG | + | chr6_2:72021614-72021633 | Msa0927590:intron | 30.0% | |
| AATTACAATCTCAATCTTGC+TGG | + | chr6_2:72021684-72021703 | Msa0927590:intron | 30.0% | |
| ATCAAGTGAAGATACAATGT+TGG | - | chr6_2:72022126-72022145 | None:intergenic | 30.0% | |
| !! | TATTAGAGGAAAGTACTTGT+AGG | - | chr6_2:72022233-72022252 | None:intergenic | 30.0% |
| ATCACATGTCATCATATTAG+AGG | - | chr6_2:72022247-72022266 | None:intergenic | 30.0% | |
| !! | GATGACATGTGATTTTGTTT+TGG | + | chr6_2:72022254-72022273 | Msa0927590:intron | 30.0% |
| !!! | GATTTTGTTTTGGCTTTGTT+TGG | + | chr6_2:72022264-72022283 | Msa0927590:intron | 30.0% |
| !! | AAGTTTTGTCATGATCACAA+TGG | + | chr6_2:72022534-72022553 | Msa0927590:intron | 30.0% |
| ! | CTACATTTTTGTGTGTTCTT+TGG | + | chr6_2:72022571-72022590 | Msa0927590:intron | 30.0% |
| !!! | TTCATTCTACTTTTTGTGTG+TGG | + | chr6_2:72022812-72022831 | Msa0927590:intron | 30.0% |
| ! | TTTTGTGAAAGGACATTTGT+AGG | + | chr6_2:72022850-72022869 | Msa0927590:intron | 30.0% |
| CAAAAATACCCTTGAATTGT+TGG | - | chr6_2:72022953-72022972 | None:intergenic | 30.0% | |
| !!! | CAACAATTCAAGGGTATTTT+TGG | + | chr6_2:72022951-72022970 | Msa0927590:CDS | 30.0% |
| GAAGTGAAAAATATCACAGT+AGG | + | chr6_2:72023293-72023312 | Msa0927590:intron | 30.0% | |
| TGTTAGATATTACGGTAGAT+TGG | - | chr6_2:72023424-72023443 | None:intergenic | 30.0% | |
| TGCATCAACAAAAATGAACA+TGG | + | chr6_2:72023685-72023704 | Msa0927590:intron | 30.0% | |
| TAAAAATGTTAGTGGTCTAG+TGG | + | chr6_2:72023840-72023859 | Msa0927590:intron | 30.0% | |
| ! | TAGGGTTAATTAAGGTTGAT+TGG | + | chr6_2:72024000-72024019 | Msa0927590:intron | 30.0% |
| !!! | TGTTTCTTTTGTTTTTAGGG+AGG | + | chr6_2:72024139-72024158 | Msa0927590:intron | 30.0% |
| ATTTACATTATGTCAACGTG+TGG | + | chr6_2:72024234-72024253 | Msa0927590:intron | 30.0% | |
| CGTTCATAATCTATATGTGT+TGG | - | chr6_2:72024304-72024323 | None:intergenic | 30.0% | |
| CCATTGAATCTTGCATATTT+AGG | - | chr6_2:72024587-72024606 | None:intergenic | 30.0% | |
| CCTAAATATGCAAGATTCAA+TGG | + | chr6_2:72024584-72024603 | Msa0927590:intron | 30.0% | |
| ! | GGTTAAGCTTTAGTAAGTTA+GGG | + | chr6_2:72024663-72024682 | Msa0927590:intron | 30.0% |
| GCATTAAGTAAGATGATCAA+TGG | + | chr6_2:72024909-72024928 | Msa0927590:intron | 30.0% | |
| GATCAATGGCTAAAATTGAA+TGG | + | chr6_2:72024923-72024942 | Msa0927590:intron | 30.0% | |
| TAGAAAAGTTGAGGGAAAAA+TGG | + | chr6_2:72024973-72024992 | Msa0927590:intron | 30.0% | |
| AGAAAAGTTGAGGGAAAAAT+GGG | + | chr6_2:72024974-72024993 | Msa0927590:intron | 30.0% | |
| AAAAATGGGGGGAAAATATT+AGG | + | chr6_2:72024988-72025007 | Msa0927590:intron | 30.0% | |
| AAAATGGGGGGAAAATATTA+GGG | + | chr6_2:72024989-72025008 | Msa0927590:intron | 30.0% | |
| ! | TTTTGTCACACATCTAATCA+AGG | + | chr6_2:72025052-72025071 | Msa0927590:intron | 30.0% |
| CAAGAAGAAAGAGTGAAAAA+CGG | + | chr6_2:72025123-72025142 | Msa0927590:intron | 30.0% | |
| TTTATGTGTGGAAATAACAC+GGG | + | chr6_2:72025233-72025252 | Msa0927590:intron | 30.0% | |
| TAGAAGAACATAGAAAAAGG+TGG | + | chr6_2:72025428-72025447 | Msa0927590:intron | 30.0% | |
| CATATGCTTTCTTGTAGATA+AGG | - | chr6_2:72025865-72025884 | None:intergenic | 30.0% | |
| !!! | AAAGCATATGCTTTTTCTCA+CGG | + | chr6_2:72025875-72025894 | Msa0927590:intron | 30.0% |
| GATGTTTATACATATGTAGG+TGG | + | chr6_2:72026172-72026191 | Msa0927590:intron | 30.0% | |
| TTATCAACAGTAATGAAAGC+TGG | + | chr6_2:72026257-72026276 | Msa0927590:CDS | 30.0% | |
| TACAGAAAAACTTCTTCCTA+TGG | - | chr6_2:72026412-72026431 | None:intergenic | 30.0% | |
| ! | AACAAAGAGATGATAGCTTT+TGG | + | chr6_2:72026456-72026475 | Msa0927590:CDS | 30.0% |
| ! | AATTAGAACATGTGCCTTTT+AGG | - | chr6_2:72026609-72026628 | None:intergenic | 30.0% |
| ATAATCAATCTCTCAACTTG+TGG | + | chr6_2:72026631-72026650 | Msa0927590:intron | 30.0% | |
| CCATGAGATGAAATTCATAT+AGG | - | chr6_2:72026667-72026686 | None:intergenic | 30.0% | |
| CCTATATGAATTTCATCTCA+TGG | + | chr6_2:72026664-72026683 | Msa0927590:intron | 30.0% | |
| ! | GTCGTCTTTTACTTAATTCT+AGG | + | chr6_2:72026879-72026898 | Msa0927590:intron | 30.0% |
| CTTAATTCTAGGCAAACATT+TGG | + | chr6_2:72026890-72026909 | Msa0927590:intron | 30.0% | |
| ! | TGGTCTTTTACTCAAATCTA+TGG | - | chr6_2:72027041-72027060 | None:intergenic | 30.0% |
| !!! | AAAATGATGAGTGTCGTTTT+AGG | + | chr6_2:72027094-72027113 | Msa0927590:intron | 30.0% |
| TAAATCTGCAATGACAAATG+TGG | + | chr6_2:72027635-72027654 | Msa0927590:CDS | 30.0% | |
| !!! | TTAACTCTTTTTAGGGTTAG+GGG | - | chr6_2:72027925-72027944 | None:intergenic | 30.0% |
| AGAGACAGAAAAAGTAAATC+CGG | - | chr6_2:72028027-72028046 | None:intergenic | 30.0% | |
| !! | ATGGCTTTAAATAGTAGTAG+CGG | - | chr6_2:72028126-72028145 | None:intergenic | 30.0% |
| !! | AAACGTTGATTTCATGATCA+TGG | - | chr6_2:72028145-72028164 | None:intergenic | 30.0% |
| TATGTATTTGCAATCTAGGT+TGG | + | chr6_2:72028228-72028247 | Msa0927590:intron | 30.0% | |
| ACTTGTATAATTAGAACTCC+TGG | - | chr6_2:72028372-72028391 | None:intergenic | 30.0% | |
| ! | GGAGTTCTAATTATACAAGT+TGG | + | chr6_2:72028372-72028391 | Msa0927590:CDS | 30.0% |
| ATTCTACATACCTCAAAGAA+AGG | + | chr6_2:72028415-72028434 | Msa0927590:CDS | 30.0% | |
| ! | AATTGTGCAATAGGATTTTG+AGG | + | chr6_2:72028531-72028550 | Msa0927590:intron | 30.0% |
| AAAAGTGAACAAATCAGTTC+TGG | + | chr6_2:72028560-72028579 | Msa0927590:CDS | 30.0% | |
| TATTAACAATGTCAGCATGT+CGG | - | chr6_2:72028713-72028732 | None:intergenic | 30.0% | |
| !! | GTCATTATATGAGTTGATGT+CGG | + | chr6_2:72028758-72028777 | Msa0927590:intron | 30.0% |
| GAATATTACACACACTATGA+AGG | - | chr6_2:72028838-72028857 | None:intergenic | 30.0% | |
| AACTGCTATTGAAGGATTAT+TGG | + | chr6_2:72029034-72029053 | Msa0927590:CDS | 30.0% | |
| ATTGGAAATGAAAGCAATTC+AGG | + | chr6_2:72029070-72029089 | Msa0927590:CDS | 30.0% | |
| AGGCCATCTGTATAATAATA+TGG | - | chr6_2:72029331-72029350 | None:intergenic | 30.0% | |
| ! | GTTTGTTGAAAAAATTGGGA+AGG | + | chr6_2:72029397-72029416 | Msa0927590:CDS | 30.0% |
| GGAATCGTTCTATCTAAATT+TGG | + | chr6_2:72029418-72029437 | Msa0927590:CDS | 30.0% | |
| ACAGTGTCTTCATTATTGTT+TGG | - | chr6_2:72029488-72029507 | None:intergenic | 30.0% | |
| AAGGTTGGAATGTGCAAATA+AGG | - | chr6_2:72020853-72020872 | None:intergenic | 35.0% | |
| GTGCAAGAGATTCATCATAA+TGG | + | chr6_2:72020967-72020986 | Msa0927590:CDS | 35.0% | |
| GCAAGAGATTCATCATAATG+GGG | + | chr6_2:72020969-72020988 | Msa0927590:CDS | 35.0% | |
| ! | GTTTTGTCACAAAACCTCTT+TGG | - | chr6_2:72021008-72021027 | None:intergenic | 35.0% |
| ! | TTTTCCCTGATGATCCTTTT+AGG | + | chr6_2:72021052-72021071 | Msa0927590:CDS | 35.0% |
| TTTGCCTAAAAGGATCATCA+GGG | - | chr6_2:72021059-72021078 | None:intergenic | 35.0% | |
| ATTTGCCTAAAAGGATCATC+AGG | - | chr6_2:72021060-72021079 | None:intergenic | 35.0% | |
| !! | ATCTCGTAGGTTGATTAAAG+GGG | + | chr6_2:72021098-72021117 | Msa0927590:CDS | 35.0% |
| ! | TTTGGTAACCACTCAAAGAT+TGG | - | chr6_2:72021138-72021157 | None:intergenic | 35.0% |
| ATAACTAATGCCTTGAGGAA+TGG | - | chr6_2:72021220-72021239 | None:intergenic | 35.0% | |
| ! | CGTTTTACCCTTTTTAATGG+TGG | + | chr6_2:72021586-72021605 | Msa0927590:intron | 35.0% |
| ! | TTTACCCTTTTTAATGGTGG+TGG | + | chr6_2:72021589-72021608 | Msa0927590:intron | 35.0% |
| TACACCACCACCATTAAAAA+GGG | - | chr6_2:72021596-72021615 | None:intergenic | 35.0% | |
| TTACACCACCACCATTAAAA+AGG | - | chr6_2:72021597-72021616 | None:intergenic | 35.0% | |
| AGTTTAACAATGAGATCGGA+CGG | - | chr6_2:72021660-72021679 | None:intergenic | 35.0% | |
| !!! | CACTAGTGTATGCTGTTTTT+GGG | + | chr6_2:72022010-72022029 | Msa0927590:CDS | 35.0% |
| !! | ACAATGTTGGTTCTGTTACA+GGG | - | chr6_2:72022113-72022132 | None:intergenic | 35.0% |
| !! | TACAATGTTGGTTCTGTTAC+AGG | - | chr6_2:72022114-72022133 | None:intergenic | 35.0% |
| CTGAAAAACACCAGTGATAA+AGG | - | chr6_2:72022160-72022179 | None:intergenic | 35.0% | |
| ! | CTTTATCACTGGTGTTTTTC+AGG | + | chr6_2:72022158-72022177 | Msa0927590:CDS | 35.0% |
| ACTTGAACACACTTAATCTG+AGG | - | chr6_2:72022324-72022343 | None:intergenic | 35.0% | |
| TAAGAAACATGACACCAACA+CGG | - | chr6_2:72022740-72022759 | None:intergenic | 35.0% | |
| !!! | TTCTACTTTTTGTGTGTGGT+TGG | + | chr6_2:72022816-72022835 | Msa0927590:intron | 35.0% |
| !!! | TTTGGTGCTGATTTTGTGAA+AGG | + | chr6_2:72022839-72022858 | Msa0927590:intron | 35.0% |
| AAATACCCTTGAATTGTTGG+AGG | - | chr6_2:72022950-72022969 | None:intergenic | 35.0% | |
| CATCTTTACCAATAGACATG+AGG | + | chr6_2:72023022-72023041 | Msa0927590:CDS | 35.0% | |
| GATACTAACCTCATGTCTAT+TGG | - | chr6_2:72023033-72023052 | None:intergenic | 35.0% | |
| GAAAAATATCACAGTAGGGT+TGG | + | chr6_2:72023298-72023317 | Msa0927590:intron | 35.0% | |
| GCAAAATTATCATGACTCAC+TGG | + | chr6_2:72023390-72023409 | Msa0927590:intron | 35.0% | |
| !! | AAAGCTCTAAGGTGTTGTTA+TGG | + | chr6_2:72023865-72023884 | Msa0927590:intron | 35.0% |
| !! | AAGCTCTAAGGTGTTGTTAT+GGG | + | chr6_2:72023866-72023885 | Msa0927590:intron | 35.0% |
| AACTTGTCAAAAAATTCGGC+TGG | + | chr6_2:72024523-72024542 | Msa0927590:intron | 35.0% | |
| AAAAGAGGAGGGAAAAATGT+GGG | + | chr6_2:72024612-72024631 | Msa0927590:intron | 35.0% | |
| ATTAGGGTAACAATAGCTTG+AGG | + | chr6_2:72024641-72024660 | Msa0927590:intron | 35.0% | |
| TTAGGGTAACAATAGCTTGA+GGG | + | chr6_2:72024642-72024661 | Msa0927590:intron | 35.0% | |
| ! | GGGTTAAGCTTTAGTAAGTT+AGG | + | chr6_2:72024662-72024681 | Msa0927590:intron | 35.0% |
| !!! | GTGCGATGCATTTTTTTAGA+TGG | + | chr6_2:72024737-72024756 | Msa0927590:intron | 35.0% |
| TTCAAAAATATGGATTCGGC+TGG | + | chr6_2:72024849-72024868 | Msa0927590:intron | 35.0% | |
| ! | ACTTGATAACAAAATTCGGC+TGG | + | chr6_2:72024887-72024906 | Msa0927590:intron | 35.0% |
| CAATGGCTTAGAAAAGTTGA+GGG | + | chr6_2:72024965-72024984 | Msa0927590:intron | 35.0% | |
| GAAAAGTTGAGGGAAAAATG+GGG | + | chr6_2:72024975-72024994 | Msa0927590:intron | 35.0% | |
| AAAAGTTGAGGGAAAAATGG+GGG | + | chr6_2:72024976-72024995 | Msa0927590:intron | 35.0% | |
| TTAGGGCAACAATAACTTGA+AGG | + | chr6_2:72025006-72025025 | Msa0927590:intron | 35.0% | |
| TAGGGCAACAATAACTTGAA+GGG | + | chr6_2:72025007-72025026 | Msa0927590:intron | 35.0% | |
| GAAGTCTAGAAATGAAAGAG+AGG | + | chr6_2:72025079-72025098 | Msa0927590:intron | 35.0% | |
| !!! | GACAGTGTTTTTTCTAATCG+TGG | + | chr6_2:72025732-72025751 | Msa0927590:intron | 35.0% |
| CCAACTACTACACATGTTAT+TGG | - | chr6_2:72026006-72026025 | None:intergenic | 35.0% | |
| CCAATAACATGTGTAGTAGT+TGG | + | chr6_2:72026003-72026022 | Msa0927590:CDS | 35.0% | |
| ATAACATGTGTAGTAGTTGG+TGG | + | chr6_2:72026006-72026025 | Msa0927590:CDS | 35.0% | |
| ! | GTTTTCACATACCTTGTGAA+AGG | + | chr6_2:72026030-72026049 | Msa0927590:CDS | 35.0% |
| AAGATCCAAACAAGTTCATG+AGG | - | chr6_2:72026482-72026501 | None:intergenic | 35.0% | |
| ! | ACATCATGTTACTTGACTAG+TGG | + | chr6_2:72026504-72026523 | Msa0927590:CDS | 35.0% |
| ATTAAGAATGAGAGCTCACA+TGG | + | chr6_2:72027007-72027026 | Msa0927590:intron | 35.0% | |
| !!! | ACTCATCATTTTGAAACGGA+GGG | - | chr6_2:72027086-72027105 | None:intergenic | 35.0% |
| !! | CGACACTCATCATTTTGAAA+CGG | - | chr6_2:72027090-72027109 | None:intergenic | 35.0% |
| GTAGTGTGCTGAGTATTAAT+TGG | + | chr6_2:72027224-72027243 | Msa0927590:intron | 35.0% | |
| TGTGCTGAGTATTAATTGGA+GGG | + | chr6_2:72027228-72027247 | Msa0927590:intron | 35.0% | |
| !! | AAGCGACACTCATTTTGAAA+CGG | + | chr6_2:72027328-72027347 | Msa0927590:intron | 35.0% |
| !! | AGAGTTGAGATATTTTCAGG+AGG | + | chr6_2:72027426-72027445 | Msa0927590:intron | 35.0% |
| GAGGTGTAATCAGAAATTCA+TGG | + | chr6_2:72027445-72027464 | Msa0927590:intron | 35.0% | |
| TGTGGTTCAAGCAGTAATAA+TGG | + | chr6_2:72027653-72027672 | Msa0927590:CDS | 35.0% | |
| !! | GGCTCTAACACTACAATTTT+TGG | + | chr6_2:72027674-72027693 | Msa0927590:CDS | 35.0% |
| ! | AGTGGTGTGTTGCTAAATAA+TGG | - | chr6_2:72027702-72027721 | None:intergenic | 35.0% |
| ATCATTGTATCTGCCATGTT+AGG | + | chr6_2:72027738-72027757 | Msa0927590:CDS | 35.0% | |
| TCATTGTATCTGCCATGTTA+GGG | + | chr6_2:72027739-72027758 | Msa0927590:CDS | 35.0% | |
| !! | GCCTTTTTAAGCATGGATAT+TGG | + | chr6_2:72027846-72027865 | Msa0927590:CDS | 35.0% |
| GCCAATATCCATGCTTAAAA+AGG | - | chr6_2:72027850-72027869 | None:intergenic | 35.0% | |
| !!! | TAACTCTTTTTAGGGTTAGG+GGG | - | chr6_2:72027924-72027943 | None:intergenic | 35.0% |
| ACAACACGTACGAACAAAAT+TGG | - | chr6_2:72027987-72028006 | None:intergenic | 35.0% | |
| ACGTGTTGTGACATTCAAAT+CGG | + | chr6_2:72027998-72028017 | Msa0927590:intron | 35.0% | |
| TCTCTGTATAAACCAGAATC+AGG | - | chr6_2:72028318-72028337 | None:intergenic | 35.0% | |
| TCTAATGCTTCAACAATTCC+AGG | + | chr6_2:72028351-72028370 | Msa0927590:CDS | 35.0% | |
| !! | ACAAATCAGTTCTGGAGATA+TGG | + | chr6_2:72028568-72028587 | Msa0927590:CDS | 35.0% |
| !! | CATGTCATACTCGTTTTAAC+AGG | + | chr6_2:72028596-72028615 | Msa0927590:CDS | 35.0% |
| TATGAAGGACATACACTCTT+TGG | - | chr6_2:72028823-72028842 | None:intergenic | 35.0% | |
| ATTGACACAACTGCTATTGA+AGG | + | chr6_2:72029026-72029045 | Msa0927590:CDS | 35.0% | |
| AAATTTGGAAGATGCAGTGT+TGG | + | chr6_2:72029433-72029452 | Msa0927590:CDS | 35.0% | |
| GTCTTCATTATTGTTTGGCT+TGG | - | chr6_2:72029483-72029502 | None:intergenic | 35.0% | |
| ! | AAGTGTGTACAACCTAGTTT+TGG | - | chr6_2:72029555-72029574 | None:intergenic | 35.0% |
| AAACTAGGTTGTACACACTT+TGG | + | chr6_2:72029555-72029574 | Msa0927590:three_prime_UTR | 35.0% | |
| ! | GAGGAGAAGAGAAGTAATTT+TGG | - | chr6_2:72029645-72029664 | None:intergenic | 35.0% |
| GTGAACTTATCAACCCAAAG+AGG | + | chr6_2:72020991-72021010 | Msa0927590:CDS | 40.0% | |
| TTGGCATAACTAATGCCTTG+AGG | - | chr6_2:72021225-72021244 | None:intergenic | 40.0% | |
| !! | TTAATGGTGGTGGTGTAAAG+AGG | + | chr6_2:72021599-72021618 | Msa0927590:intron | 40.0% |
| ! | TGGTGGTGTAAAGAGGAAAT+TGG | + | chr6_2:72021606-72021625 | Msa0927590:intron | 40.0% |
| AAAACAGCATACACTAGTGG+TGG | - | chr6_2:72022009-72022028 | None:intergenic | 40.0% | |
| CCAAAAACAGCATACACTAG+TGG | - | chr6_2:72022012-72022031 | None:intergenic | 40.0% | |
| !!! | CCACTAGTGTATGCTGTTTT+TGG | + | chr6_2:72022009-72022028 | Msa0927590:CDS | 40.0% |
| !!! | ATGCTGTTTTTGGGAGTTCT+AGG | + | chr6_2:72022019-72022038 | Msa0927590:CDS | 40.0% |
| TTCACGACAACCTTTATCAC+TGG | + | chr6_2:72022147-72022166 | Msa0927590:CDS | 40.0% | |
| !!! | TGGTGTTTTTCAGGCTTGTT+TGG | + | chr6_2:72022167-72022186 | Msa0927590:CDS | 40.0% |
| !!! | GGTGTTTTTCAGGCTTGTTT+GGG | + | chr6_2:72022168-72022187 | Msa0927590:CDS | 40.0% |
| !!! | AGGCTTGTTTGGGTTTTTTC+AGG | + | chr6_2:72022178-72022197 | Msa0927590:CDS | 40.0% |
| CGGACAAAAATGCAAGTACT+TGG | - | chr6_2:72022720-72022739 | None:intergenic | 40.0% | |
| ! | ACTTGCATTTTTGTCCGTGT+TGG | + | chr6_2:72022723-72022742 | Msa0927590:intron | 40.0% |
| !! | CTTTTTGTGTGTGGTTGGTT+TGG | + | chr6_2:72022821-72022840 | Msa0927590:intron | 40.0% |
| TGAAAGGACATTTGTAGGCT+TGG | + | chr6_2:72022855-72022874 | Msa0927590:intron | 40.0% | |
| GAAAGGACATTTGTAGGCTT+GGG | + | chr6_2:72022856-72022875 | Msa0927590:intron | 40.0% | |
| CATTTGTAGGCTTGGGATAT+TGG | + | chr6_2:72022863-72022882 | Msa0927590:intron | 40.0% | |
| ! | TTTTCCCATTCTACCATCAC+TGG | + | chr6_2:72022894-72022913 | Msa0927590:CDS | 40.0% |
| AAAGCCAGTGATGGTAGAAT+GGG | - | chr6_2:72022901-72022920 | None:intergenic | 40.0% | |
| TAAAGCCAGTGATGGTAGAA+TGG | - | chr6_2:72022902-72022921 | None:intergenic | 40.0% | |
| !! | TTCTACCATCACTGGCTTTA+TGG | + | chr6_2:72022902-72022921 | Msa0927590:CDS | 40.0% |
| !! | TCTACCATCACTGGCTTTAT+GGG | + | chr6_2:72022903-72022922 | Msa0927590:CDS | 40.0% |
| TCTCATCCTCCAACAATTCA+AGG | + | chr6_2:72022941-72022960 | Msa0927590:CDS | 40.0% | |
| CTCATCCTCCAACAATTCAA+GGG | + | chr6_2:72022942-72022961 | Msa0927590:CDS | 40.0% | |
| !!! | CACTGCTATAACGTTGGTTT+TGG | - | chr6_2:72022994-72023013 | None:intergenic | 40.0% |
| AACGTTATAGCAGTGCTAGA+GGG | + | chr6_2:72022999-72023018 | Msa0927590:CDS | 40.0% | |
| ! | ATTGTGGTTCACCGTAGTTT+TGG | - | chr6_2:72023324-72023343 | None:intergenic | 40.0% |
| TACAAAACCCGTACATCGTA+CGG | - | chr6_2:72023526-72023545 | None:intergenic | 40.0% | |
| GTCTAGTGGTAAAAGCTCTA+AGG | + | chr6_2:72023854-72023873 | Msa0927590:intron | 40.0% | |
| !! | AAGGTGTTGTTATGGGTAGT+TGG | + | chr6_2:72023873-72023892 | Msa0927590:intron | 40.0% |
| TCTATTTAGACCCGCCAAAA+AGG | + | chr6_2:72023929-72023948 | Msa0927590:intron | 40.0% | |
| CTATTTAGACCCGCCAAAAA+GGG | + | chr6_2:72023930-72023949 | Msa0927590:intron | 40.0% | |
| ! | TTTTCTAATCCCGCCCTTTT+TGG | - | chr6_2:72023946-72023965 | None:intergenic | 40.0% |
| TCTATTTAGACCCGCCAAAA+AGG | + | chr6_2:72023929-72023948 | Msa0927590:intron | 40.0% | |
| CTATTTAGACCCGCCAAAAA+GGG | + | chr6_2:72023930-72023949 | Msa0927590:intron | 40.0% | |
| TATGTCAACGTGTGGAAAGA+CGG | + | chr6_2:72024242-72024261 | Msa0927590:intron | 40.0% | |
| GATTCAATGGCTCAGAAAAG+AGG | + | chr6_2:72024597-72024616 | Msa0927590:intron | 40.0% | |
| GAAAAGAGGAGGGAAAAATG+TGG | + | chr6_2:72024611-72024630 | Msa0927590:intron | 40.0% | |
| CCATTGGATCTTGCACATTT+AGG | - | chr6_2:72024951-72024970 | None:intergenic | 40.0% | |
| CCTAAATGTGCAAGATCCAA+TGG | + | chr6_2:72024948-72024967 | Msa0927590:intron | 40.0% | |
| ! | CCTCAACTTTTCTAAGCCAT+TGG | - | chr6_2:72024967-72024986 | None:intergenic | 40.0% |
| CCAATGGCTTAGAAAAGTTG+AGG | + | chr6_2:72024964-72024983 | Msa0927590:intron | 40.0% | |
| AAAGTTGAGGGAAAAATGGG+GGG | + | chr6_2:72024977-72024996 | Msa0927590:intron | 40.0% | |
| AGATGGGAAACTACAGTTCT+TGG | + | chr6_2:72025287-72025306 | Msa0927590:CDS | 40.0% | |
| ! | CTTGCAATTTACAAGGCACT+TGG | + | chr6_2:72025328-72025347 | Msa0927590:CDS | 40.0% |
| GTGGAATTAAAATGCCCTAG+AGG | - | chr6_2:72025497-72025516 | None:intergenic | 40.0% | |
| CATGTTGTGTACCTTTCACA+AGG | - | chr6_2:72026044-72026063 | None:intergenic | 40.0% | |
| ! | CTTGTGAAAGGTACACAACA+TGG | + | chr6_2:72026042-72026061 | Msa0927590:CDS | 40.0% |
| ATGAAAGCTGGACTAATCAG+TGG | + | chr6_2:72026269-72026288 | Msa0927590:CDS | 40.0% | |
| !! | CAGTGGAGTATTGTCATTAG+CGG | + | chr6_2:72026286-72026305 | Msa0927590:CDS | 40.0% |
| ATGTAGGAAGGAATAGCCAT+AGG | + | chr6_2:72026393-72026412 | Msa0927590:intron | 40.0% | |
| ACTGCTAATACACCTCATGA+TGG | + | chr6_2:72026432-72026451 | Msa0927590:CDS | 40.0% | |
| CTGCTAATACACCTCATGAT+GGG | + | chr6_2:72026433-72026452 | Msa0927590:CDS | 40.0% | |
| ATCTCTTTGTTCCCATCATG+AGG | - | chr6_2:72026447-72026466 | None:intergenic | 40.0% | |
| ! | TTTGGCCTCATGAACTTGTT+TGG | + | chr6_2:72026474-72026493 | Msa0927590:CDS | 40.0% |
| !! | CCTTTTAGGTCACAATCACA+AGG | - | chr6_2:72026595-72026614 | None:intergenic | 40.0% |
| CCTTGTGATTGTGACCTAAA+AGG | + | chr6_2:72026592-72026611 | Msa0927590:intron | 40.0% | |
| !!! | CACTCATCATTTTGAAACGG+AGG | - | chr6_2:72027087-72027106 | None:intergenic | 40.0% |
| GTGTGCTGAGTATTAATTGG+AGG | + | chr6_2:72027227-72027246 | Msa0927590:intron | 40.0% | |
| !!! | GACACTCATTTTGAAACGGA+GGG | + | chr6_2:72027332-72027351 | Msa0927590:intron | 40.0% |
| TAAGTTAAACGACAGACGGA+TGG | + | chr6_2:72027383-72027402 | Msa0927590:intron | 40.0% | |
| ! | TGTAGGACCATTTTCCAAGA+CGG | + | chr6_2:72027590-72027609 | Msa0927590:intron | 40.0% |
| ATTGTAATTCACAGCCGTCT+TGG | - | chr6_2:72027607-72027626 | None:intergenic | 40.0% | |
| ATAGCTGATAGAGCAACAAG+TGG | - | chr6_2:72027720-72027739 | None:intergenic | 40.0% | |
| TATCTGCATGAGTGCATTCT+TGG | + | chr6_2:72027818-72027837 | Msa0927590:CDS | 40.0% | |
| ATCTGCATGAGTGCATTCTT+GGG | + | chr6_2:72027819-72027838 | Msa0927590:CDS | 40.0% | |
| ! | TTTGCAATCTAGGTTGGACT+AGG | + | chr6_2:72028234-72028253 | Msa0927590:intron | 40.0% |
| ! | GTTGGACTAGGTTTACTTAG+AGG | + | chr6_2:72028246-72028265 | Msa0927590:CDS | 40.0% |
| CTTGGAAAGTTACCTGATTC+TGG | + | chr6_2:72028303-72028322 | Msa0927590:CDS | 40.0% | |
| CTCCTCATACTTGAAGCATA+TGG | + | chr6_2:72029659-72029678 | Msa0927590:three_prime_UTR | 40.0% | |
| TGCCATATGCTTCAAGTATG+AGG | - | chr6_2:72029664-72029683 | None:intergenic | 40.0% | |
| AGGAATGGCAAGACTAGCAA+TGG | - | chr6_2:72021205-72021224 | None:intergenic | 45.0% | |
| AGGAGGAAGATTGGCAAGTT+TGG | - | chr6_2:72021244-72021263 | None:intergenic | 45.0% | |
| TTACAAAGGCCAATGAGAGG+AGG | - | chr6_2:72021261-72021280 | None:intergenic | 45.0% | |
| GACTTACAAAGGCCAATGAG+AGG | - | chr6_2:72021264-72021283 | None:intergenic | 45.0% | |
| AGAGGTTGTCGAGACATCAA+AGG | - | chr6_2:72021482-72021501 | None:intergenic | 45.0% | |
| ! | ATCACGGTAAGAGAGGGTAT+AGG | + | chr6_2:72021539-72021558 | Msa0927590:intron | 45.0% |
| ! | TCACGGTAAGAGAGGGTATA+GGG | + | chr6_2:72021540-72021559 | Msa0927590:intron | 45.0% |
| AGAGGAAATTGGATTTCCGG+TGG | + | chr6_2:72021617-72021636 | Msa0927590:intron | 45.0% | |
| TGGATTTCCGGTGGTTATAG+CGG | + | chr6_2:72021626-72021645 | Msa0927590:intron | 45.0% | |
| !!! | TTTTGGGAGTTCTAGGCACA+TGG | + | chr6_2:72022026-72022045 | Msa0927590:CDS | 45.0% |
| CTCTAGCACTGCTATAACGT+TGG | - | chr6_2:72023000-72023019 | None:intergenic | 45.0% | |
| CAACGTTATAGCAGTGCTAG+AGG | + | chr6_2:72022998-72023017 | Msa0927590:CDS | 45.0% | |
| !! | AGTAGGGTTGGCCAAAACTA+CGG | + | chr6_2:72023310-72023329 | Msa0927590:intron | 45.0% |
| ACTCTAACCCGTACGATGTA+CGG | + | chr6_2:72023515-72023534 | Msa0927590:intron | 45.0% | |
| ACAAAACCCGTACATCGTAC+GGG | - | chr6_2:72023525-72023544 | None:intergenic | 45.0% | |
| GGCGGGATTAGGGTTAATTA+AGG | + | chr6_2:72023992-72024011 | Msa0927590:intron | 45.0% | |
| TCAATGGCTCAGAAAAGAGG+AGG | + | chr6_2:72024600-72024619 | Msa0927590:intron | 45.0% | |
| CAATGGCTCAGAAAAGAGGA+GGG | + | chr6_2:72024601-72024620 | Msa0927590:intron | 45.0% | |
| ! | CACTTGGTGAGTGCTCTATT+TGG | + | chr6_2:72025344-72025363 | Msa0927590:intron | 45.0% |
| TAGTGCACCACTCAAACTTG+TGG | + | chr6_2:72025470-72025489 | Msa0927590:intron | 45.0% | |
| TAGAGGTCCACAAGTTTGAG+TGG | - | chr6_2:72025480-72025499 | None:intergenic | 45.0% | |
| ACTCAAACTTGTGGACCTCT+AGG | + | chr6_2:72025479-72025498 | Msa0927590:intron | 45.0% | |
| CTCAAACTTGTGGACCTCTA+GGG | + | chr6_2:72025480-72025499 | Msa0927590:intron | 45.0% | |
| GCAGATACCCAAAAGAGTTG+TGG | - | chr6_2:72025976-72025995 | None:intergenic | 45.0% | |
| TAGGTGGGACATCTAGACAA+AGG | + | chr6_2:72026188-72026207 | Msa0927590:intron | 45.0% | |
| !!! | CGGAGGGAGTATCTTTTTTC+AGG | - | chr6_2:72027070-72027089 | None:intergenic | 45.0% |
| !!! | CGACACTCATTTTGAAACGG+AGG | + | chr6_2:72027331-72027350 | Msa0927590:intron | 45.0% |
| TTCACAGCCGTCTTGGAAAA+TGG | - | chr6_2:72027600-72027619 | None:intergenic | 45.0% | |
| ACGGCTGTGAATTACAATGC+AGG | + | chr6_2:72027609-72027628 | Msa0927590:CDS | 45.0% | |
| GTGACATTCAAATCGGAGAC+CGG | + | chr6_2:72028005-72028024 | Msa0927590:intron | 45.0% | |
| AGTAGTAGCGGTCATGATCA+TGG | - | chr6_2:72028114-72028133 | None:intergenic | 45.0% | |
| AACTTTCCAAGCTTGCATGC+TGG | - | chr6_2:72028294-72028313 | None:intergenic | 45.0% | |
| TACAGACACCGAACATGACA+TGG | + | chr6_2:72028684-72028703 | Msa0927590:intron | 45.0% | |
| AGACGTATCACACGAAGTGT+CGG | - | chr6_2:72028797-72028816 | None:intergenic | 45.0% | |
| ! | AGATGGCCTTAGTAAACCCT+AGG | + | chr6_2:72029342-72029361 | Msa0927590:intron | 45.0% |
| CTCCAACCTAGGGTTTACTA+AGG | - | chr6_2:72029351-72029370 | None:intergenic | 45.0% | |
| ! | CTTAGTAAACCCTAGGTTGG+AGG | + | chr6_2:72029349-72029368 | Msa0927590:CDS | 45.0% |
| ! | AAACCCTAGGTTGGAGGTTA+TGG | + | chr6_2:72029355-72029374 | Msa0927590:CDS | 45.0% |
| TCTCCATAACCTCCAACCTA+GGG | - | chr6_2:72029361-72029380 | None:intergenic | 45.0% | |
| TTCTCCATAACCTCCAACCT+AGG | - | chr6_2:72029362-72029381 | None:intergenic | 45.0% | |
| !!! | ATTTATTTTTTAATTAAACA+AGG | - | chr6_2:72023247-72023266 | None:intergenic | 5.0% |
| !! | GCTAGTCTTGCCATTCCTCA+AGG | + | chr6_2:72021207-72021226 | Msa0927590:CDS | 50.0% |
| GCCAATCTTCCTCCTCTCAT+TGG | + | chr6_2:72021249-72021268 | Msa0927590:CDS | 50.0% | |
| GCCAATGAGAGGAGGAAGAT+TGG | - | chr6_2:72021253-72021272 | None:intergenic | 50.0% | |
| GATGTCTCGACAACCTCTCA+AGG | + | chr6_2:72021484-72021503 | Msa0927590:intron | 50.0% | |
| GTATATCTCGGCTCCTTGAG+AGG | - | chr6_2:72021500-72021519 | None:intergenic | 50.0% | |
| GGATTTCCGGTGGTTATAGC+GGG | + | chr6_2:72021627-72021646 | Msa0927590:intron | 50.0% | |
| !! | AGTTCTAGGCACATGGCAGT+TGG | + | chr6_2:72022033-72022052 | Msa0927590:CDS | 50.0% |
| ! | GTTCTAGGCACATGGCAGTT+GGG | + | chr6_2:72022034-72022053 | Msa0927590:CDS | 50.0% |
| TGTTCGTGTCGTGTCTGTGT+CGG | - | chr6_2:72022365-72022384 | None:intergenic | 50.0% | |
| !! | ACCATCACTGGCTTTATGGG+AGG | + | chr6_2:72022906-72022925 | Msa0927590:CDS | 50.0% |
| !! | CCATCACTGGCTTTATGGGA+GGG | + | chr6_2:72022907-72022926 | Msa0927590:CDS | 50.0% |
| CTCTAACCCGTACGATGTAC+GGG | + | chr6_2:72023516-72023535 | Msa0927590:intron | 50.0% | |
| TTTAGACCCGCCAAAAAGGG+CGG | + | chr6_2:72023933-72023952 | Msa0927590:intron | 50.0% | |
| ! | TCTAATCCCGCCCTTTTTGG+CGG | - | chr6_2:72023943-72023962 | None:intergenic | 50.0% |
| TTTAGACCCGCCAAAAAGGG+CGG | + | chr6_2:72023933-72023952 | Msa0927590:intron | 50.0% | |
| ! | AACCCTAATCCCGCCCTTTT+TGG | - | chr6_2:72023987-72024006 | None:intergenic | 50.0% |
| CATGAGTGCATTCTTGGGTG+TGG | + | chr6_2:72027824-72027843 | Msa0927590:CDS | 50.0% | |
| !! | GGGTGTGGCCTTTTTAAGCA+TGG | + | chr6_2:72027839-72027858 | Msa0927590:CDS | 50.0% |
| ! | GAGTACTCACAGAGAGCATG+AGG | - | chr6_2:72027872-72027891 | None:intergenic | 50.0% |
| TTTCCAAGCTTGCATGCTGG+TGG | - | chr6_2:72028291-72028310 | None:intergenic | 50.0% | |
| ! | GTCGGTGTCCATGTCATGTT+CGG | - | chr6_2:72028695-72028714 | None:intergenic | 50.0% |
| GGCCTTAGTAAACCCTAGGT+TGG | + | chr6_2:72029346-72029365 | Msa0927590:CDS | 50.0% | |
| ! | TTCCGGTGGTTATAGCGGGA+CGG | + | chr6_2:72021631-72021650 | Msa0927590:intron | 55.0% |
| CCCTCCCATAAAGCCAGTGA+TGG | - | chr6_2:72022910-72022929 | None:intergenic | 55.0% | |
| TTAGACCCGCCAAAAAGGGC+GGG | + | chr6_2:72023934-72023953 | Msa0927590:intron | 55.0% | |
| !! | CTAATCCCGCCCTTTTTGGC+GGG | - | chr6_2:72023942-72023961 | None:intergenic | 55.0% |
| TTAGACCCGCCAAAAAGGGC+GGG | + | chr6_2:72023934-72023953 | Msa0927590:intron | 55.0% | |
| !! | CTAATCCCGCCCTTTTTGGC+GGG | - | chr6_2:72023942-72023961 | None:intergenic | 55.0% |
| ! | CCTAATCCCGCCCTTTTTGG+CGG | - | chr6_2:72023984-72024003 | None:intergenic | 55.0% |
| CGCCAAAAAGGGCGGGATTA+GGG | + | chr6_2:72023941-72023960 | Msa0927590:intron | 55.0% | |
| AGACCACCAGCATGCAAGCT+TGG | + | chr6_2:72028285-72028304 | Msa0927590:CDS | 55.0% | |
| CACCGTCCCGCTATAACCAC+CGG | - | chr6_2:72021636-72021655 | None:intergenic | 60.0% | |
| CCGCCAAAAAGGGCGGGATT+AGG | + | chr6_2:72023940-72023959 | Msa0927590:intron | 60.0% | |
| ! | CGGTGGTTATAGCGGGACGG+TGG | + | chr6_2:72021634-72021653 | Msa0927590:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_2 | gene | 72020840 | 72029700 | 72020840 | ID=Msa0927590;Name=Msa0927590 |
| chr6_2 | mRNA | 72020840 | 72029700 | 72020840 | ID=Msa0927590-mRNA-1;Parent=Msa0927590;Name=Msa0927590-mRNA-1;_AED=0.07;_eAED=0.07;_QI=118|1|1|1|1|1|12|189|639 |
| chr6_2 | exon | 72020840 | 72021276 | 72020840 | ID=Msa0927590-mRNA-1:exon:12137;Parent=Msa0927590-mRNA-1 |
| chr6_2 | exon | 72021992 | 72022199 | 72021992 | ID=Msa0927590-mRNA-1:exon:12138;Parent=Msa0927590-mRNA-1 |
| chr6_2 | exon | 72022872 | 72023043 | 72022872 | ID=Msa0927590-mRNA-1:exon:12139;Parent=Msa0927590-mRNA-1 |
| chr6_2 | exon | 72025284 | 72025349 | 72025284 | ID=Msa0927590-mRNA-1:exon:12140;Parent=Msa0927590-mRNA-1 |
| chr6_2 | exon | 72025961 | 72026074 | 72025961 | ID=Msa0927590-mRNA-1:exon:12141;Parent=Msa0927590-mRNA-1 |
| chr6_2 | exon | 72026191 | 72026307 | 72026191 | ID=Msa0927590-mRNA-1:exon:12142;Parent=Msa0927590-mRNA-1 |
| chr6_2 | exon | 72026399 | 72026525 | 72026399 | ID=Msa0927590-mRNA-1:exon:12143;Parent=Msa0927590-mRNA-1 |
| chr6_2 | exon | 72027595 | 72027881 | 72027595 | ID=Msa0927590-mRNA-1:exon:12144;Parent=Msa0927590-mRNA-1 |
| chr6_2 | exon | 72028246 | 72028436 | 72028246 | ID=Msa0927590-mRNA-1:exon:12145;Parent=Msa0927590-mRNA-1 |
| chr6_2 | exon | 72028544 | 72028617 | 72028544 | ID=Msa0927590-mRNA-1:exon:12146;Parent=Msa0927590-mRNA-1 |
| chr6_2 | exon | 72029015 | 72029091 | 72029015 | ID=Msa0927590-mRNA-1:exon:12147;Parent=Msa0927590-mRNA-1 |
| chr6_2 | exon | 72029344 | 72029700 | 72029344 | ID=Msa0927590-mRNA-1:exon:12148;Parent=Msa0927590-mRNA-1 |
| chr6_2 | five_prime_UTR | 72020840 | 72020957 | 72020840 | ID=Msa0927590-mRNA-1:five_prime_utr;Parent=Msa0927590-mRNA-1 |
| chr6_2 | CDS | 72020958 | 72021276 | 72020958 | ID=Msa0927590-mRNA-1:cds;Parent=Msa0927590-mRNA-1 |
| chr6_2 | CDS | 72021992 | 72022199 | 72021992 | ID=Msa0927590-mRNA-1:cds;Parent=Msa0927590-mRNA-1 |
| chr6_2 | CDS | 72022872 | 72023043 | 72022872 | ID=Msa0927590-mRNA-1:cds;Parent=Msa0927590-mRNA-1 |
| chr6_2 | CDS | 72025284 | 72025349 | 72025284 | ID=Msa0927590-mRNA-1:cds;Parent=Msa0927590-mRNA-1 |
| chr6_2 | CDS | 72025961 | 72026074 | 72025961 | ID=Msa0927590-mRNA-1:cds;Parent=Msa0927590-mRNA-1 |
| chr6_2 | CDS | 72026191 | 72026307 | 72026191 | ID=Msa0927590-mRNA-1:cds;Parent=Msa0927590-mRNA-1 |
| chr6_2 | CDS | 72026399 | 72026525 | 72026399 | ID=Msa0927590-mRNA-1:cds;Parent=Msa0927590-mRNA-1 |
| chr6_2 | CDS | 72027595 | 72027881 | 72027595 | ID=Msa0927590-mRNA-1:cds;Parent=Msa0927590-mRNA-1 |
| chr6_2 | CDS | 72028246 | 72028436 | 72028246 | ID=Msa0927590-mRNA-1:cds;Parent=Msa0927590-mRNA-1 |
| chr6_2 | CDS | 72028544 | 72028617 | 72028544 | ID=Msa0927590-mRNA-1:cds;Parent=Msa0927590-mRNA-1 |
| chr6_2 | CDS | 72029015 | 72029091 | 72029015 | ID=Msa0927590-mRNA-1:cds;Parent=Msa0927590-mRNA-1 |
| chr6_2 | CDS | 72029344 | 72029511 | 72029344 | ID=Msa0927590-mRNA-1:cds;Parent=Msa0927590-mRNA-1 |
| chr6_2 | three_prime_UTR | 72029512 | 72029700 | 72029512 | ID=Msa0927590-mRNA-1:three_prime_utr;Parent=Msa0927590-mRNA-1 |
| Gene Sequence |
| Protein sequence |
