AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0934470

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0934470 MtrunA17_Chr6g0449401 86.169 629 16 4 1 558 13 641 0.0 1066
Msa0934470 MtrunA17_Chr7g0227331 66.722 601 136 14 1 558 1 580 0.0 731
Msa0934470 MtrunA17_Chr2g0290691 76.203 395 84 3 173 558 159 552 0.0 638
Msa0934470 MtrunA17_Chr8g0335351 72.632 380 98 4 183 558 335 712 0.0 577
Msa0934470 MtrunA17_Chr7g0250631 71.240 379 104 4 183 558 329 705 0.0 575
Msa0934470 MtrunA17_Chr1g0179101 64.948 388 127 5 180 562 433 816 7.35e-175 516
Msa0934470 MtrunA17_Chr7g0266031 65.296 389 124 6 180 562 455 838 9.87e-175 517
Msa0934470 MtrunA17_Chr2g0309421 61.954 389 142 4 173 558 132 517 6.95e-171 496
Msa0934470 MtrunA17_Chr8g0356291 64.737 380 123 7 186 558 94 469 4.61e-169 490
Msa0934470 MtrunA17_Chr3g0080101 61.979 384 134 5 183 558 380 759 1.04e-167 496
Msa0934470 MtrunA17_Chr4g0063311 54.103 390 156 6 189 558 62 448 7.06e-139 412
Msa0934470 MtrunA17_Chr2g0321101 53.125 384 141 9 197 558 66 432 1.33e-125 377
Msa0934470 MtrunA17_Chr8g0381091 47.895 380 167 6 193 558 52 414 4.72e-116 352
Msa0934470 MtrunA17_Chr2g0285711 45.161 434 201 8 139 558 6 416 3.75e-115 350
Msa0934470 MtrunA17_Chr2g0312641 42.857 406 196 10 160 558 35 411 1.44e-107 331
Msa0934470 MtrunA17_Chr4g0030361 45.902 366 152 4 193 558 282 601 5.33e-103 324
Msa0934470 MtrunA17_Chr8g0369091 46.721 366 152 5 193 558 572 894 2.06e-102 330
Msa0934470 MtrunA17_Chr2g0327561 46.995 366 159 2 193 558 601 931 2.76e-100 325
Msa0934470 MtrunA17_Chr8g0338741 39.295 369 167 11 215 558 15 351 3.50e-75 245
Msa0934470 MtrunA17_Chr2g0329011 38.682 349 172 6 215 558 12 323 7.18e-72 235
Msa0934470 MtrunA17_Chr4g0032761 37.135 377 202 8 215 568 10 374 2.96e-71 234
Msa0934470 MtrunA17_Chr7g0234641 35.278 360 208 6 215 566 8 350 7.41e-65 218
Msa0934470 MtrunA17_Chr4g0018201 35.905 337 172 6 220 555 759 1052 1.99e-57 208
Msa0934470 MtrunA17_Chr5g0428981 35.608 337 173 6 220 555 763 1056 3.32e-57 207
Msa0934470 MtrunA17_Chr6g0478601 34.118 340 181 7 217 555 108 405 2.92e-55 195
Msa0934470 MtrunA17_Chr3g0135951 31.868 364 211 10 199 555 73 406 1.32e-48 176
Msa0934470 MtrunA17_Chr1g0153321 30.423 355 209 8 208 558 96 416 1.32e-47 174
Msa0934470 MtrunA17_Chr2g0299781 29.640 361 223 8 199 555 92 425 1.37e-45 168
Msa0934470 MtrunA17_Chr1g0187581 31.594 345 187 9 220 555 117 421 2.52e-45 167
Msa0934470 MtrunA17_Chr1g0167351 31.624 351 200 10 211 555 99 415 4.96e-45 167
Msa0934470 MtrunA17_Chr1g0183651 30.114 352 206 8 208 555 108 423 2.80e-44 165
Msa0934470 MtrunA17_Chr1g0167311 30.270 370 216 10 193 555 85 419 8.97e-44 163
Msa0934470 MtrunA17_Chr7g0261491 28.784 403 233 10 161 555 71 427 2.50e-42 160
Msa0934470 MtrunA17_Chr7g0245031 39.865 148 87 1 220 367 148 293 7.99e-27 114
Msa0934470 MtrunA17_Chr7g0245031 36.552 145 89 2 418 561 273 415 2.16e-20 94.4
Msa0934470 MtrunA17_Chr4g0059751 36.257 171 93 4 206 367 78 241 1.21e-26 112
Msa0934470 MtrunA17_Chr4g0059751 36.975 119 72 2 444 561 247 363 1.89e-20 94.0
Msa0934470 MtrunA17_Chr1g0197721 36.076 158 99 1 207 364 38 193 9.99e-24 104
Msa0934470 MtrunA17_Chr3g0140631 35.526 152 96 1 217 368 34 183 5.08e-21 94.0
Msa0934470 MtrunA17_Chr3g0140631 34.259 108 67 1 443 550 185 288 1.31e-14 74.7
Msa0934470 MtrunA17_Chr8g0351491 26.023 342 174 8 209 550 5 267 1.14e-20 92.4
Msa0934470 MtrunA17_Chr3g0132591 26.149 348 166 9 226 567 118 380 1.27e-20 95.1
Msa0934470 MtrunA17_Chr3g0125381 39.640 111 63 1 440 550 100 206 5.33e-20 89.0
Msa0934470 MtrunA17_Chr3g0125381 30.337 178 107 7 270 435 2 174 3.84e-11 63.2
Msa0934470 MtrunA17_Chr4g0013131 23.263 331 178 9 211 539 3 259 3.09e-18 87.8
Msa0934470 MtrunA17_Chr3g0114511 32.484 157 99 2 212 367 24 174 4.84e-18 87.0
Msa0934470 MtrunA17_Chr2g0286501 35.948 153 90 3 217 369 46 190 5.62e-18 88.2
Msa0934470 MtrunA17_Chr3g0107051 35.099 151 95 2 217 367 18 165 1.40e-17 85.5
Msa0934470 MtrunA17_Chr1g0188031 32.716 162 93 4 214 367 14 167 1.42e-17 85.5
Msa0934470 MtrunA17_Chr8g0353621 31.319 182 117 3 217 392 7 186 1.46e-17 83.2
Msa0934470 MtrunA17_Chr8g0353621 39.216 102 58 1 449 550 164 261 3.28e-15 76.3
Msa0934470 MtrunA17_Chr1g0205421 32.704 159 100 3 211 367 3 156 1.99e-17 85.1
Msa0934470 MtrunA17_Chr8g0379091 32.680 153 100 1 215 367 21 170 3.00e-17 84.7
Msa0934470 MtrunA17_Chr7g0244521 24.854 342 175 11 212 550 4 266 3.80e-17 84.3
Msa0934470 MtrunA17_Chr2g0284031 32.026 153 101 1 215 367 26 175 4.98e-17 84.3
Msa0934470 MtrunA17_Chr6g0453681 24.925 333 172 9 219 551 18 272 8.52e-17 83.6
Msa0934470 MtrunA17_Chr4g0063881 23.164 354 188 11 216 567 7 278 9.45e-17 82.8
Msa0934470 MtrunA17_Chr5g0432491 34.437 151 97 2 217 367 20 168 1.24e-16 82.4
Msa0934470 MtrunA17_Chr6g0468751 25.000 332 171 9 219 550 18 271 1.29e-16 82.8
Msa0934470 MtrunA17_Chr4g0074111 23.466 277 136 6 218 491 16 219 1.94e-16 81.6
Msa0934470 MtrunA17_Chr2g0302431 30.864 162 110 2 206 367 6 165 2.19e-16 82.0
Msa0934470 MtrunA17_Chr3g0132671 24.586 362 165 11 219 550 18 301 2.42e-16 82.0
Msa0934470 MtrunA17_Chr2g0321841 29.221 154 103 3 217 367 1 151 3.30e-16 82.4
Msa0934470 MtrunA17_Chr4g0025671 28.387 155 105 3 216 367 4 155 7.61e-16 81.3
Msa0934470 MtrunA17_Chr3g0107011 29.801 151 103 1 217 367 11 158 8.80e-16 80.1
Msa0934470 MtrunA17_Chr8g0346071 23.563 348 178 13 206 550 8 270 1.03e-15 79.7
Msa0934470 MtrunA17_Chr1g0190831 28.387 155 103 3 217 367 1 151 1.07e-15 80.5
Msa0934470 MtrunA17_Chr5g0428031 29.605 152 105 2 216 367 5 154 1.31e-15 79.3
Msa0934470 MtrunA17_Chr2g0284011 24.752 303 152 8 212 511 4 233 1.70e-15 79.0
Msa0934470 MtrunA17_Chr1g0173921 28.571 154 104 3 217 367 1 151 7.99e-15 78.2
Msa0934470 MtrunA17_Chr7g0272841 30.851 188 114 6 220 399 68 247 1.00e-14 77.4
Msa0934470 MtrunA17_Chr8g0345801 23.913 322 163 12 217 531 12 258 1.71e-14 73.9
Msa0934470 MtrunA17_Chr7g0258051 25.581 172 118 4 216 380 12 180 1.76e-14 76.6
Msa0934470 MtrunA17_Chr5g0432471 21.884 329 173 10 217 539 9 259 1.93e-14 75.9
Msa0934470 MtrunA17_Chr2g0304111 28.931 159 106 2 209 367 17 168 2.15e-14 75.9
Msa0934470 MtrunA17_Chr8g0385341 33.333 153 96 4 220 368 30 180 2.45e-14 75.9
Msa0934470 MtrunA17_Chr3g0091311 30.128 156 106 2 212 367 4 156 2.93e-14 73.2
Msa0934470 MtrunA17_Chr7g0274941 30.323 155 103 3 212 364 8 159 5.27e-14 72.8
Msa0934470 MtrunA17_Chr1g0185221 27.273 154 106 3 217 367 1 151 6.86e-14 74.7
Msa0934470 MtrunA17_Chr1g0200601 31.325 166 108 4 207 368 17 180 8.84e-14 73.9
Msa0934470 MtrunA17_Chr5g0419441 29.193 161 109 3 211 371 232 387 8.98e-14 74.7
Msa0934470 MtrunA17_Chr7g0260191 26.623 154 107 3 217 367 1 151 9.11e-14 74.3
Msa0934470 MtrunA17_Chr1g0166101 30.380 158 95 3 217 367 21 170 1.26e-13 73.2
Msa0934470 MtrunA17_Chr1g0205931 29.148 223 126 9 208 416 53 257 1.63e-13 73.6
Msa0934470 MtrunA17_Chr4g0001331 30.921 152 97 3 216 367 21 164 1.72e-13 72.8
Msa0934470 MtrunA17_Chr2g0317001 27.632 152 106 2 220 371 15 162 1.72e-13 73.6
Msa0934470 MtrunA17_Chr5g0441011 30.719 153 100 4 217 367 10 158 1.85e-13 72.8
Msa0934470 MtrunA17_Chr1g0150321 31.126 151 101 2 217 367 10 157 2.01e-13 72.4
Msa0934470 MtrunA17_Chr2g0333821 22.590 332 181 9 220 551 14 269 2.86e-13 72.0
Msa0934470 MtrunA17_Chr5g0409421 26.136 352 201 13 217 565 1 296 2.91e-13 72.0
Msa0934470 MtrunA17_Chr8g0346081 28.302 159 107 3 209 367 11 162 3.43e-13 72.0
Msa0934470 MtrunA17_Chr1g0176421 29.167 192 128 5 205 394 146 331 4.24e-13 72.0
Msa0934470 MtrunA17_Chr1g0202831 26.293 232 142 6 212 419 402 628 6.81e-13 71.6
Msa0934470 MtrunA17_Chr6g0486661 33.043 115 72 3 443 555 909 1020 9.46e-13 71.2
Msa0934470 MtrunA17_Chr3g0130151 32.026 153 98 5 218 367 242 391 1.06e-12 70.9
Msa0934470 MtrunA17_Chr1g0170281 31.677 161 100 5 216 368 110 268 1.09e-12 70.9
Msa0934470 MtrunA17_Chr1g0173541 30.769 182 114 5 217 394 49 222 1.64e-12 70.1
Msa0934470 MtrunA17_Chr1g0170551 32.075 106 66 2 449 554 162 261 1.80e-12 70.5
Msa0934470 MtrunA17_Chr1g0170551 31.081 148 98 3 220 367 7 150 8.56e-12 68.6
Msa0934470 MtrunA17_Chr2g0317501 31.148 183 115 7 202 379 114 290 2.30e-12 70.1
Msa0934470 MtrunA17_Chr1g0203881 32.432 148 94 3 224 367 45 190 2.54e-12 69.3
Msa0934470 MtrunA17_Chr2g0330211 29.032 155 107 2 214 367 12 164 2.91e-12 69.3
Msa0934470 MtrunA17_Chr5g0448721 29.213 178 118 5 224 399 100 271 3.31e-12 69.3
Msa0934470 MtrunA17_Chr3g0091281 31.013 158 102 4 212 367 4 156 4.11e-12 66.2
Msa0934470 MtrunA17_Chr3g0133541 28.241 216 141 4 218 422 305 517 4.29e-12 68.9
Msa0934470 MtrunA17_Chr8g0374701 29.630 162 105 5 235 394 148 302 5.49e-12 68.6
Msa0934470 MtrunA17_Chr8g0384301 28.492 179 116 5 224 399 303 472 5.57e-12 68.6
Msa0934470 MtrunA17_Chr8g0339221 26.100 341 190 12 217 551 1 285 6.35e-12 67.8
Msa0934470 MtrunA17_Chr4g0047191 29.508 122 84 1 248 367 73 194 1.29e-11 66.2
Msa0934470 MtrunA17_Chr5g0441691 31.373 153 99 4 220 368 68 218 1.47e-11 67.0
Msa0934470 MtrunA17_Chr4g0074811 32.680 153 97 5 220 368 91 241 1.60e-11 67.0
Msa0934470 MtrunA17_Chr4g0047211 29.508 122 84 1 248 367 68 189 1.64e-11 66.2
Msa0934470 MtrunA17_Chr5g0444171 30.065 153 101 4 220 368 92 242 1.66e-11 67.0
Msa0934470 MtrunA17_Chr4g0045261 30.000 150 98 4 247 394 167 311 1.67e-11 67.0
Msa0934470 MtrunA17_Chr1g0201571 32.026 153 93 6 220 367 126 272 1.88e-11 67.0
Msa0934470 MtrunA17_Chr7g0218071 30.357 168 110 5 214 379 114 276 2.08e-11 67.0
Msa0934470 MtrunA17_Chr3g0129721 31.515 165 100 6 210 367 14 172 2.22e-11 65.1
Msa0934470 MtrunA17_Chr3g0091421 30.573 157 102 4 213 367 5 156 2.32e-11 64.3
Msa0934470 MtrunA17_Chr0c02g0489761 31.373 153 99 4 220 368 78 228 2.86e-11 66.2
Msa0934470 MtrunA17_Chr7g0257751 31.373 153 99 4 220 368 58 208 3.09e-11 65.9
Msa0934470 MtrunA17_Chr6g0453711 28.022 182 122 6 202 379 90 266 3.66e-11 65.9
Msa0934470 MtrunA17_Chr7g0252301 29.814 161 106 3 218 375 853 1009 7.98e-11 65.1
Msa0934470 MtrunA17_Chr5g0405421 28.758 153 103 4 220 367 99 250 9.35e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0934470 AT5G47750.1 76.650 394 82 4 173 558 144 535 0.0 620
Msa0934470 AT4G26610.1 77.436 390 82 4 173 558 77 464 0.0 618
Msa0934470 AT5G55910.2 73.723 411 101 4 155 558 44 454 0.0 609
Msa0934470 AT5G55910.1 73.723 411 101 4 155 558 44 454 0.0 609
Msa0934470 AT3G27580.2 70.419 453 92 7 140 558 80 524 0.0 607
Msa0934470 AT3G27580.1 70.419 453 92 7 140 558 80 524 0.0 607
Msa0934470 AT2G44830.2 62.273 440 153 7 129 558 269 705 0.0 549
Msa0934470 AT2G44830.3 62.273 440 153 7 129 558 269 705 0.0 549
Msa0934470 AT2G44830.1 62.273 440 153 7 129 558 269 705 0.0 549
Msa0934470 AT5G40030.1 66.398 372 113 4 193 558 86 451 0.0 521
Msa0934470 AT1G79250.1 64.420 371 126 2 193 558 119 488 3.53e-173 502
Msa0934470 AT1G79250.3 64.420 371 126 2 193 558 119 488 3.53e-173 502
Msa0934470 AT1G79250.2 64.420 371 126 2 193 558 119 488 3.53e-173 502
Msa0934470 AT1G79250.4 64.420 371 126 2 193 558 119 488 3.53e-173 502
Msa0934470 AT3G12690.1 61.340 388 134 3 176 558 141 517 5.83e-170 494
Msa0934470 AT3G12690.3 61.340 388 134 3 176 558 141 517 5.83e-170 494
Msa0934470 AT3G12690.2 61.340 388 134 3 176 558 141 517 5.83e-170 494
Msa0934470 AT3G52890.2 60.945 402 143 4 173 562 492 891 8.34e-169 504
Msa0934470 AT3G52890.4 60.945 402 143 4 173 562 492 891 8.34e-169 504
Msa0934470 AT3G52890.1 60.945 402 143 4 173 562 492 891 8.34e-169 504
Msa0934470 AT3G52890.3 60.945 402 143 4 173 562 492 891 8.34e-169 504
Msa0934470 AT1G16440.1 65.041 369 116 5 193 558 86 444 7.15e-168 486
Msa0934470 AT5G03640.2 57.452 416 156 6 159 562 484 890 1.60e-164 492
Msa0934470 AT5G03640.1 57.452 416 156 6 159 562 484 890 1.60e-164 492
Msa0934470 AT2G36350.1 61.417 381 134 4 193 562 532 910 5.30e-162 486
Msa0934470 AT2G26700.1 46.368 468 186 10 150 558 12 473 1.42e-129 389
Msa0934470 AT3G44610.1 53.994 363 131 9 220 558 71 421 1.36e-124 374
Msa0934470 AT2G34650.1 46.604 427 192 11 140 558 4 402 3.57e-118 357
Msa0934470 AT5G58140.3 47.397 365 149 4 194 558 551 872 1.42e-105 338
Msa0934470 AT5G58140.6 47.397 365 149 4 194 558 551 872 2.03e-105 338
Msa0934470 AT5G58140.7 47.397 365 149 4 194 558 551 872 2.03e-105 338
Msa0934470 AT5G58140.5 47.397 365 149 4 194 558 551 872 2.03e-105 338
Msa0934470 AT5G58140.2 47.397 365 149 4 194 558 551 872 2.03e-105 338
Msa0934470 AT5G58140.1 47.397 365 149 4 194 558 551 872 2.03e-105 338
Msa0934470 AT3G14370.1 44.504 373 169 6 195 558 61 404 6.10e-103 319
Msa0934470 AT3G45780.2 46.175 366 156 4 193 558 636 960 8.38e-95 311
Msa0934470 AT3G45780.1 46.175 366 156 4 193 558 636 960 8.38e-95 311
Msa0934470 AT1G53700.1 41.600 375 176 6 195 558 66 408 1.68e-93 295
Msa0934470 AT3G20830.1 38.440 359 181 8 215 558 16 349 1.32e-69 230
Msa0934470 AT1G51170.1 37.808 365 183 9 215 563 17 353 1.86e-69 229
Msa0934470 AT4G13000.1 35.127 353 183 8 215 558 15 330 1.50e-63 213
Msa0934470 AT3G25250.1 33.799 358 185 7 215 555 12 334 2.55e-63 214
Msa0934470 AT1G45160.2 35.088 342 175 6 215 555 665 960 4.47e-52 192
Msa0934470 AT1G45160.1 35.088 342 175 6 215 555 665 960 6.26e-52 192
Msa0934470 AT5G62310.1 34.421 337 178 8 220 555 754 1048 1.14e-51 191
Msa0934470 AT1G48490.3 33.333 342 179 6 215 555 823 1116 1.71e-51 191
Msa0934470 AT1G48490.2 33.333 342 179 6 215 555 823 1116 1.71e-51 191
Msa0934470 AT1G48490.1 33.333 342 179 6 215 555 823 1116 1.71e-51 191
Msa0934470 AT1G48490.4 33.333 342 179 6 215 555 824 1117 1.76e-51 191
Msa0934470 AT3G17850.1 33.529 340 183 7 217 555 879 1176 4.91e-50 187
Msa0934470 AT5G09890.1 30.966 352 207 8 208 555 90 409 1.12e-48 177
Msa0934470 AT5G09890.2 30.966 352 207 8 208 555 90 409 1.22e-48 177
Msa0934470 AT4G33080.1 29.752 363 221 7 199 555 73 407 2.21e-47 173
Msa0934470 AT4G33080.2 29.752 363 221 7 199 555 73 407 2.22e-47 173
Msa0934470 AT1G30640.3 30.618 356 210 11 205 555 12 335 5.39e-47 171
Msa0934470 AT1G30640.2 30.618 356 210 11 205 555 105 428 9.69e-47 172
Msa0934470 AT1G30640.1 30.618 356 210 11 205 555 105 428 9.69e-47 172
Msa0934470 AT4G14350.3 29.500 400 233 10 161 556 70 424 7.88e-45 167
Msa0934470 AT4G14350.2 29.500 400 233 10 161 556 70 424 8.92e-45 167
Msa0934470 AT4G14350.1 29.500 400 233 10 161 556 70 424 8.92e-45 167
Msa0934470 AT4G14350.4 29.500 400 233 10 161 556 70 424 8.92e-45 167
Msa0934470 AT2G20470.3 28.993 407 234 10 158 558 72 429 2.29e-44 165
Msa0934470 AT3G23310.1 30.748 361 213 10 199 555 99 426 2.37e-44 166
Msa0934470 AT2G20470.2 28.993 407 234 10 158 558 72 429 4.05e-44 165
Msa0934470 AT2G20470.1 28.993 407 234 10 158 558 72 429 4.05e-44 165
Msa0934470 AT1G03920.1 29.877 405 230 10 160 558 87 443 2.31e-43 163
Msa0934470 AT1G03920.3 29.877 405 230 10 160 558 87 443 2.31e-43 163
Msa0934470 AT1G03920.2 31.594 345 192 8 220 558 24 330 4.42e-43 160
Msa0934470 AT2G19400.1 28.846 364 224 9 199 555 84 419 2.04e-41 157
Msa0934470 AT5G58140.4 48.855 131 67 0 194 324 551 681 2.15e-33 135
Msa0934470 AT3G08720.1 38.710 155 93 1 213 367 133 285 3.51e-27 115
Msa0934470 AT3G08720.1 42.857 119 64 3 444 561 291 406 3.12e-23 103
Msa0934470 AT3G08720.3 38.710 155 93 1 213 367 133 285 3.51e-27 115
Msa0934470 AT3G08720.3 42.857 119 64 3 444 561 291 406 3.12e-23 103
Msa0934470 AT3G08720.4 38.710 155 93 1 213 367 133 285 3.51e-27 115
Msa0934470 AT3G08720.4 42.857 119 64 3 444 561 291 406 3.12e-23 103
Msa0934470 AT3G08720.2 38.710 155 93 1 213 367 133 285 3.51e-27 115
Msa0934470 AT3G08720.2 42.857 119 64 3 444 561 291 406 3.12e-23 103
Msa0934470 AT3G08730.1 35.052 194 105 3 174 367 107 279 1.16e-26 113
Msa0934470 AT3G08730.1 37.931 145 86 3 418 561 259 400 1.39e-23 104
Msa0934470 AT3G08730.2 35.052 194 105 3 174 367 107 279 1.16e-26 113
Msa0934470 AT3G08730.2 37.931 145 86 3 418 561 259 400 1.39e-23 104
Msa0934470 AT5G04510.3 39.310 145 86 2 220 364 44 186 1.80e-24 104
Msa0934470 AT5G04510.2 34.054 185 119 3 220 404 44 225 1.94e-24 106
Msa0934470 AT5G04510.2 34.127 126 77 3 431 555 196 316 2.17e-14 75.9
Msa0934470 AT5G04510.1 39.310 145 86 2 220 364 44 186 3.56e-24 106
Msa0934470 AT5G04510.1 34.127 126 77 3 431 555 196 316 1.81e-14 76.6
Msa0934470 AT3G10540.1 37.931 145 88 2 220 364 45 187 1.28e-22 101
Msa0934470 AT3G10540.1 33.333 126 78 3 431 555 197 317 7.24e-14 74.7
Msa0934470 AT2G25090.1 25.970 335 175 10 220 551 15 279 1.69e-22 101
Msa0934470 AT5G18700.1 37.748 151 86 3 217 367 1 143 1.30e-20 97.1
Msa0934470 AT5G57630.2 26.335 281 128 6 213 490 5 209 5.11e-20 93.2
Msa0934470 AT5G57630.1 26.335 281 128 6 213 490 5 209 6.45e-20 92.8
Msa0934470 AT5G25110.1 24.859 354 182 10 203 554 31 302 1.78e-19 92.0
Msa0934470 AT2G45490.2 29.004 231 152 7 212 434 14 240 2.51e-19 88.2
Msa0934470 AT2G45490.2 37.647 85 53 0 443 527 170 254 2.70e-12 67.8
Msa0934470 AT2G45490.1 29.004 231 152 7 212 434 14 240 5.11e-19 88.2
Msa0934470 AT2G45490.1 38.889 108 62 1 443 550 170 273 9.64e-18 84.3
Msa0934470 AT4G32830.1 34.868 152 97 1 217 368 28 177 6.05e-19 88.2
Msa0934470 AT4G32830.1 35.185 108 66 1 443 550 179 282 1.49e-14 75.1
Msa0934470 AT2G25880.4 33.735 166 108 1 203 368 21 184 7.12e-19 87.8
Msa0934470 AT2G25880.4 37.037 108 64 1 443 550 186 289 3.39e-15 77.0
Msa0934470 AT2G25880.1 33.735 166 108 1 203 368 8 171 7.37e-19 87.8
Msa0934470 AT2G25880.1 37.037 108 64 1 443 550 173 276 3.39e-15 77.0
Msa0934470 AT3G01090.3 24.925 333 172 9 219 551 18 272 1.34e-18 89.7
Msa0934470 AT3G01090.1 24.925 333 172 9 219 551 18 272 1.34e-18 89.7
Msa0934470 AT2G25880.3 33.735 166 108 1 203 368 69 232 1.43e-18 87.8
Msa0934470 AT2G25880.3 37.037 108 64 1 443 550 234 337 1.14e-14 76.3
Msa0934470 AT3G01090.2 24.925 333 172 9 219 551 41 295 1.84e-18 89.4
Msa0934470 AT1G12680.1 34.194 155 90 5 224 376 111 255 4.38e-18 87.8
Msa0934470 AT2G30360.1 25.882 340 166 12 217 550 18 277 6.72e-18 87.0
Msa0934470 AT5G10930.1 25.857 321 163 9 218 536 10 257 8.79e-18 86.7
Msa0934470 AT3G61960.1 24.695 328 167 11 217 538 7 260 1.33e-17 87.0
Msa0934470 AT3G61960.2 24.695 328 167 11 217 538 7 260 1.34e-17 86.7
Msa0934470 AT4G18700.1 32.026 153 101 1 215 367 21 170 5.66e-17 84.3
Msa0934470 AT2G20050.2 36.975 119 69 3 446 561 931 1046 1.18e-16 84.3
Msa0934470 AT2G20050.1 36.975 119 69 3 446 561 934 1049 1.23e-16 84.3
Msa0934470 AT5G45810.1 30.719 153 103 1 215 367 23 172 1.34e-16 83.2
Msa0934470 AT3G29160.3 24.024 333 175 9 219 551 19 273 1.42e-16 82.0
Msa0934470 AT3G17510.1 32.692 156 103 2 212 367 12 165 1.61e-16 82.8
Msa0934470 AT4G24400.1 30.263 152 104 2 216 367 5 154 2.05e-16 82.4
Msa0934470 AT4G24400.2 30.263 152 104 2 216 367 5 154 2.71e-16 81.6
Msa0934470 AT2G38490.1 37.255 153 87 4 218 367 26 172 3.25e-16 81.6
Msa0934470 AT3G29160.1 24.024 333 175 9 219 551 19 273 3.75e-16 82.0
Msa0934470 AT3G29160.2 24.024 333 175 9 219 551 19 273 3.75e-16 82.0
Msa0934470 AT4G14580.1 25.076 327 169 11 213 536 14 267 5.51e-16 80.9
Msa0934470 AT5G45820.1 30.573 157 106 2 211 367 3 156 9.25e-16 80.1
Msa0934470 AT5G28290.3 29.870 154 102 3 217 367 1 151 1.03e-15 80.9
Msa0934470 AT2G34180.1 25.088 283 140 7 209 490 46 257 1.13e-15 80.5
Msa0934470 AT5G28290.1 29.870 154 102 3 217 367 1 151 1.14e-15 80.5
Msa0934470 AT5G28290.2 29.870 154 102 3 217 367 1 151 1.14e-15 80.5
Msa0934470 AT1G29230.1 30.719 153 99 2 217 367 71 218 1.42e-15 80.1
Msa0934470 AT3G04810.2 25.980 204 128 5 217 400 1 201 1.80e-15 80.1
Msa0934470 AT3G04810.1 25.980 204 128 5 217 400 1 201 1.80e-15 80.1
Msa0934470 AT3G04810.3 25.980 204 128 5 217 400 1 201 1.80e-15 80.1
Msa0934470 AT3G44200.2 27.922 154 105 3 217 367 5 155 2.40e-15 80.1
Msa0934470 AT3G44200.1 27.922 154 105 3 217 367 5 155 2.40e-15 80.1
Msa0934470 AT2G25880.2 37.037 108 64 1 443 550 141 244 2.43e-15 76.6
Msa0934470 AT5G21326.1 32.680 153 97 4 217 367 10 158 4.07e-15 78.2
Msa0934470 AT3G20860.1 25.166 151 112 1 217 367 1 150 4.09e-15 78.2
Msa0934470 AT5G01810.3 33.333 159 99 4 211 367 3 156 5.76e-15 77.4
Msa0934470 AT3G06030.1 29.268 205 123 6 201 399 59 247 6.98e-15 78.2
Msa0934470 AT3G63280.2 28.571 154 104 3 217 367 1 151 6.99e-15 78.2
Msa0934470 AT3G63280.3 28.571 154 104 3 217 367 1 151 6.99e-15 78.2
Msa0934470 AT3G63280.1 28.571 154 104 3 217 367 1 151 6.99e-15 78.2
Msa0934470 AT1G54510.4 27.922 154 105 3 217 367 1 151 7.00e-15 78.2
Msa0934470 AT1G54510.2 27.922 154 105 3 217 367 1 151 7.00e-15 78.2
Msa0934470 AT1G54510.1 27.922 154 105 3 217 367 1 151 7.00e-15 78.2
Msa0934470 AT1G54510.3 27.922 154 105 3 217 367 1 151 7.00e-15 78.2
Msa0934470 AT3G63280.4 28.387 155 105 3 216 367 54 205 7.35e-15 78.2
Msa0934470 AT2G26980.2 31.098 164 102 5 206 367 5 159 7.45e-15 75.5
Msa0934470 AT5G01810.1 33.333 159 99 4 211 367 3 156 7.80e-15 77.4
Msa0934470 AT5G01810.2 33.333 159 99 4 211 367 3 156 7.80e-15 77.4
Msa0934470 AT2G26980.1 31.098 164 102 5 206 367 5 159 1.37e-14 76.3
Msa0934470 AT1G35670.1 31.818 154 99 4 219 368 25 176 1.43e-14 77.0
Msa0934470 AT2G26980.3 31.098 164 102 5 206 367 5 159 1.56e-14 76.6
Msa0934470 AT5G58380.1 21.687 332 182 8 220 550 12 266 1.59e-14 76.6
Msa0934470 AT2G26980.4 31.098 164 102 5 206 367 15 169 1.63e-14 76.6
Msa0934470 AT5G01820.1 35.849 159 94 5 211 367 14 166 1.83e-14 76.3
Msa0934470 AT5G35410.2 29.139 151 105 2 217 367 8 156 2.20e-14 75.5
Msa0934470 AT1G54960.1 30.108 186 118 6 220 399 68 247 2.47e-14 76.6
Msa0934470 AT1G54960.2 30.108 186 118 6 220 399 68 247 2.47e-14 76.6
Msa0934470 AT2G26980.5 31.098 164 102 5 206 367 5 159 2.59e-14 75.9
Msa0934470 AT5G39440.1 33.557 149 97 2 219 367 18 164 3.76e-14 75.5
Msa0934470 AT5G35410.1 29.139 151 105 2 217 367 8 156 4.57e-14 75.1
Msa0934470 AT1G69220.1 30.488 164 103 4 211 371 242 397 4.82e-14 75.9
Msa0934470 AT1G01140.2 29.341 167 111 3 201 367 5 164 4.83e-14 75.1
Msa0934470 AT1G01140.1 29.341 167 111 3 201 367 5 164 4.84e-14 75.1
Msa0934470 AT1G53570.6 30.108 186 118 5 224 406 218 394 4.95e-14 75.5
Msa0934470 AT1G01140.3 29.341 167 111 3 201 367 5 164 5.00e-14 75.1
Msa0934470 AT1G53570.7 30.108 186 118 5 224 406 218 394 5.05e-14 75.1
Msa0934470 AT1G30270.2 22.024 336 183 10 217 550 28 286 6.81e-14 74.7
Msa0934470 AT1G53570.1 30.108 186 118 5 224 406 218 394 7.12e-14 75.1
Msa0934470 AT1G53570.2 30.108 186 118 5 224 406 218 394 7.30e-14 75.1
Msa0934470 AT1G53570.3 30.108 186 118 5 224 406 218 394 7.30e-14 75.1
Msa0934470 AT1G30270.1 22.024 336 183 10 217 550 28 286 7.88e-14 74.3
Msa0934470 AT1G53570.4 30.108 186 118 5 224 406 218 394 8.04e-14 74.7
Msa0934470 AT4G09570.1 31.138 167 109 4 206 368 11 175 1.26e-13 73.9
Msa0934470 AT1G09000.2 28.910 211 130 8 220 417 69 272 1.29e-13 74.3
Msa0934470 AT3G23000.1 31.013 158 94 4 217 367 22 171 1.31e-13 73.6
Msa0934470 AT1G09000.1 28.910 211 130 8 220 417 69 272 1.57e-13 73.9
Msa0934470 AT1G48260.1 32.026 153 102 2 215 367 6 156 1.69e-13 73.2
Msa0934470 AT3G10660.2 32.680 153 97 4 220 368 186 336 3.16e-13 73.2
Msa0934470 AT3G10660.1 32.680 153 97 4 220 368 186 336 3.16e-13 73.2
Msa0934470 AT1G50700.3 33.333 153 96 4 220 368 73 223 3.93e-13 72.4
Msa0934470 AT2G17890.1 32.680 153 97 4 220 367 108 259 4.01e-13 72.4
Msa0934470 AT5G45430.2 30.108 186 113 7 217 399 1 172 4.20e-13 72.4
Msa0934470 AT5G45430.1 30.108 186 113 7 217 399 1 172 4.77e-13 72.0
Msa0934470 AT4G19110.2 28.804 184 118 5 217 399 1 172 5.57e-13 71.6
Msa0934470 AT1G50700.1 33.333 153 96 4 220 368 73 223 5.79e-13 72.0
Msa0934470 AT4G19110.1 28.804 184 118 5 217 399 1 172 6.18e-13 71.6
Msa0934470 AT1G50700.2 33.333 153 96 4 220 368 73 223 7.53e-13 71.6
Msa0934470 AT4G26070.4 30.476 210 122 8 182 376 20 220 9.33e-13 70.5
Msa0934470 AT3G20410.2 32.026 153 98 4 220 368 91 241 1.17e-12 70.9
Msa0934470 AT3G20410.1 32.026 153 98 4 220 368 91 241 1.17e-12 70.9
Msa0934470 AT4G04720.2 30.719 153 100 4 220 368 80 230 1.27e-12 70.9
Msa0934470 AT4G04720.1 30.719 153 100 4 220 368 80 230 1.27e-12 70.9
Msa0934470 AT4G26070.1 32.258 155 98 5 215 367 63 212 1.30e-12 69.3
Msa0934470 AT2G46700.1 34.127 126 78 3 246 367 172 296 1.39e-12 70.9
Msa0934470 AT1G32320.1 31.034 145 92 2 223 367 51 187 1.43e-12 69.3
Msa0934470 AT4G26070.5 30.409 171 112 5 208 376 43 208 1.46e-12 69.7
Msa0934470 AT1G53165.2 28.105 153 106 2 219 371 14 162 1.67e-12 70.9
Msa0934470 AT1G53165.3 28.105 153 106 2 219 371 14 162 1.68e-12 70.9
Msa0934470 AT1G53165.1 28.105 153 106 2 219 371 14 162 1.71e-12 70.9
Msa0934470 AT4G26070.2 31.707 164 105 5 215 376 63 221 2.04e-12 69.3
Msa0934470 AT4G26070.3 31.707 164 105 5 215 376 63 221 2.04e-12 69.3
Msa0934470 AT2G41860.2 32.026 153 98 4 220 368 54 204 2.66e-12 69.7
Msa0934470 AT2G41860.1 32.026 153 98 4 220 368 54 204 2.85e-12 69.7
Msa0934470 AT1G12580.1 28.185 259 168 9 175 422 2 253 3.12e-12 69.7
Msa0934470 AT4G30960.1 29.333 150 103 2 218 367 22 168 4.15e-12 68.9
Msa0934470 AT1G69220.2 30.137 146 93 3 229 371 231 370 5.17e-12 69.3
Msa0934470 AT4G35310.2 28.022 182 123 5 220 399 97 272 5.56e-12 68.9
Msa0934470 AT4G35310.1 28.022 182 123 5 220 399 97 272 5.56e-12 68.9
Msa0934470 AT2G38910.1 29.775 178 115 6 220 394 134 304 5.70e-12 68.9
Msa0934470 AT2G41140.1 28.962 183 116 6 219 394 122 297 6.60e-12 68.6
Msa0934470 AT2G35890.2 27.706 231 146 8 175 394 82 302 8.28e-12 68.2
Msa0934470 AT2G35890.1 27.706 231 146 8 175 394 82 302 8.28e-12 68.2
Msa0934470 AT3G21220.2 29.452 146 93 3 223 367 73 209 9.95e-12 67.0
Msa0934470 AT3G21220.1 29.452 146 93 3 223 367 73 209 9.95e-12 67.0
Msa0934470 AT5G04870.1 30.168 179 113 5 220 394 150 320 1.12e-11 68.2
Msa0934470 AT3G05050.3 29.870 154 107 1 214 367 132 284 1.22e-11 67.8
Msa0934470 AT3G05050.2 29.870 154 107 1 214 367 132 284 1.22e-11 67.8
Msa0934470 AT3G05050.1 29.870 154 107 1 214 367 132 284 1.22e-11 67.8
Msa0934470 AT1G73500.1 29.730 148 93 4 223 367 50 189 1.34e-11 66.2
Msa0934470 AT3G57530.2 33.557 149 93 4 224 368 67 213 1.41e-11 67.0
Msa0934470 AT2G31500.1 34.228 149 92 4 224 368 70 216 1.43e-11 67.8
Msa0934470 AT4G14480.1 28.662 157 109 2 212 367 7 161 1.46e-11 67.4
Msa0934470 AT1G50240.3 31.724 145 95 3 220 364 6 146 1.50e-11 68.2
Msa0934470 AT1G50240.3 32.353 102 63 2 449 550 161 256 1.94e-11 67.8
Msa0934470 AT1G50240.2 31.724 145 95 3 220 364 6 146 1.50e-11 68.2
Msa0934470 AT1G50240.2 32.353 102 63 2 449 550 161 256 1.94e-11 67.8
Msa0934470 AT1G76040.3 32.215 149 95 4 224 368 116 262 1.80e-11 67.0
Msa0934470 AT4G10010.2 32.749 171 106 6 202 367 136 302 1.80e-11 67.4
Msa0934470 AT3G57530.1 33.557 149 93 4 224 368 67 213 1.83e-11 67.4
Msa0934470 AT4G36070.1 28.177 181 118 6 219 394 70 243 1.92e-11 67.0
Msa0934470 AT1G78290.3 32.258 155 93 5 217 367 1 147 2.21e-11 65.9
Msa0934470 AT1G78290.2 32.258 155 93 5 217 367 1 147 2.21e-11 65.9
Msa0934470 AT1G76040.2 32.215 149 95 4 224 368 116 262 2.39e-11 67.0
Msa0934470 AT4G36070.2 28.333 180 117 6 220 394 71 243 2.51e-11 67.0
Msa0934470 AT1G53050.2 30.994 171 109 6 202 367 114 280 2.57e-11 67.0
Msa0934470 AT1G53050.1 30.994 171 109 6 202 367 114 280 2.57e-11 67.0
Msa0934470 AT2G17290.1 29.936 157 106 4 220 374 85 239 3.10e-11 66.6
Msa0934470 AT2G17290.2 29.936 157 106 4 220 374 85 239 3.10e-11 66.6
Msa0934470 AT5G66210.3 29.412 153 104 2 219 367 61 213 3.16e-11 66.2
Msa0934470 AT5G39420.1 30.387 181 117 6 202 378 85 260 3.26e-11 66.6
Msa0934470 AT5G12480.1 29.870 154 102 4 219 368 58 209 3.69e-11 66.2
Msa0934470 AT5G19360.1 31.373 153 99 4 220 368 68 218 3.78e-11 66.2
Msa0934470 AT5G66210.6 29.412 153 104 2 219 367 61 213 3.86e-11 65.9
Msa0934470 AT5G66210.4 29.412 153 104 2 219 367 61 213 3.86e-11 65.9
Msa0934470 AT4G04710.2 29.108 213 130 9 193 394 8 210 4.23e-11 65.9
Msa0934470 AT5G66210.1 29.412 153 104 2 219 367 61 213 4.34e-11 65.9
Msa0934470 AT5G66210.2 29.412 153 104 2 219 367 61 213 4.34e-11 65.9
Msa0934470 AT5G66210.5 29.412 153 104 2 219 367 61 213 4.45e-11 65.9
Msa0934470 AT5G12180.1 31.373 153 99 4 220 368 73 223 4.58e-11 65.9
Msa0934470 AT4G04710.1 29.108 213 130 9 193 394 8 210 4.76e-11 65.9
Msa0934470 AT1G63700.1 27.517 149 104 2 226 372 406 552 5.12e-11 66.2
Msa0934470 AT1G63700.2 27.517 149 104 2 226 372 406 552 5.12e-11 66.2
Msa0934470 AT5G57565.2 33.065 124 69 4 279 396 14 129 5.18e-11 60.8
Msa0934470 AT5G57565.6 33.065 124 69 4 279 396 14 129 5.18e-11 60.8
Msa0934470 AT3G15220.1 26.623 154 109 2 218 371 13 162 5.35e-11 65.9
Msa0934470 AT4G04710.4 29.108 213 130 9 193 394 8 210 5.40e-11 65.5
Msa0934470 AT5G19450.2 30.719 153 100 4 220 368 57 207 5.50e-11 65.9
Msa0934470 AT5G19450.1 30.719 153 100 4 220 368 57 207 5.50e-11 65.9
Msa0934470 AT3G49370.1 28.025 157 105 4 218 367 140 295 6.23e-11 65.5
Msa0934470 AT1G33770.1 32.484 157 99 5 214 367 135 287 6.43e-11 65.5
Msa0934470 AT1G73690.1 33.540 161 97 5 221 377 10 164 7.90e-11 64.7
Msa0934470 AT1G66750.1 34.211 152 89 6 221 367 12 157 8.87e-11 64.3

Find 134 sgRNAs with CRISPR-Local

Find 202 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGTTGTTGGGCAGCCTTTA+AGG 0.173778 6_3:+4315336 Msa0934470:CDS
TCCTTGATTATTTCTATATA+AGG 0.186285 6_3:-4313043 None:intergenic
CCTTCACCTTTAATAATTTC+AGG 0.218049 6_3:-4315209 None:intergenic
AAGCTGACAGTGGGAGATTC+TGG 0.263435 6_3:-4315362 None:intergenic
GGAGATTCTGGAAACCTTAA+AGG 0.272828 6_3:-4315350 None:intergenic
TCGTGAGGGGCCGTTGGAAA+TGG 0.281307 6_3:+4313642 Msa0934470:CDS
AGACATTATCATCATAATTA+TGG 0.289252 6_3:+4313099 Msa0934470:CDS
CGAACACCGTTCAAAGGTTC+TGG 0.292174 6_3:+4315293 Msa0934470:CDS
TTGGCGCCTGAAATTATTAA+AGG 0.297557 6_3:+4315203 Msa0934470:CDS
GAATGGATGTTGTTTGATTT+CGG 0.318757 6_3:-4315459 None:intergenic
TGCAGAAGTTCTCCTTGCTT+TGG 0.324779 6_3:+4314812 Msa0934470:CDS
CTTATATCATTTGCCTTATG+AGG 0.331403 6_3:-4313592 None:intergenic
TCTATAGGCAAGACGGTGTT+GGG 0.334697 6_3:-4315426 None:intergenic
CGTGAGGGGCCGTTGGAAAT+GGG 0.347707 6_3:+4313643 Msa0934470:CDS
GTTCCTCAAATCAAGGAATT+CGG 0.348020 6_3:-4315749 None:intergenic
CCTTGATTATTTCTATATAA+GGG 0.352324 6_3:-4313042 None:intergenic
TCTGGCTGCATTGCACATGC+TGG 0.356299 6_3:-4315014 None:intergenic
AGTACTGGTGAAACTTTGTT+TGG 0.356688 6_3:-4313409 None:intergenic
TTCTTATACGAACTCTTGTT+TGG 0.364317 6_3:+4315269 Msa0934470:CDS
CATTCTTTCACAATGTGAAC+TGG 0.366931 6_3:+4315477 Msa0934470:CDS
CTGTGGGTTGGTGGACGTTC+GGG 0.367660 6_3:+4315243 Msa0934470:CDS
AGATTGGGAAGTGGAGATAT+AGG 0.370938 6_3:+4313685 Msa0934470:CDS
TAAGGGAGGCCGCGAAGAAC+GGG 0.378316 6_3:-4313025 None:intergenic
TAACTACATAGCTGTTTAGA+TGG 0.380890 6_3:-4313137 None:intergenic
CAGAACCTTTGAACGGTGTT+CGG 0.380901 6_3:-4315292 None:intergenic
GCTGTGGGTTGGTGGACGTT+CGG 0.382116 6_3:+4315242 Msa0934470:CDS
ACCACGATGTTTAATGTTGT+TGG 0.384486 6_3:+4315323 Msa0934470:CDS
AGAACTTGAGTCAAAATTCT+CGG 0.389980 6_3:-4313241 None:intergenic
CACTGTCAGCTTTGCTGCAA+GGG 0.393901 6_3:+4315373 Msa0934470:CDS
GAAGTTGGAATGAACCCTTC+TGG 0.395335 6_3:+4315574 Msa0934470:three_prime_UTR
GTTGGCTCTGCGACTAGCTC+AGG 0.397789 6_3:-4315140 None:intergenic
TTAGTTTCAGTGATCGGGTT+TGG 0.409046 6_3:-4314969 None:intergenic
TTCGGTAGCTCCGCGTCTAT+AGG 0.426540 6_3:-4315441 None:intergenic
AACACTCTCTTGCTTGGTAA+TGG 0.434398 6_3:+4313882 Msa0934470:CDS
GTCTATAGGCAAGACGGTGT+TGG 0.435613 6_3:-4315427 None:intergenic
TTGGAGTACTTGCACATGCT+TGG 0.440491 6_3:+4314831 Msa0934470:CDS
GACATTGACCGCGCACTTGT+TGG 0.440756 6_3:-4315158 None:intergenic
TTTAGAATATTGAAGAGATT+GGG 0.441585 6_3:+4313670 Msa0934470:CDS
AAACTTTGTTCCTCAAATCA+AGG 0.443109 6_3:-4315756 None:intergenic
CCACGATGTTTAATGTTGTT+GGG 0.443702 6_3:+4315324 Msa0934470:CDS
GTGGCGACCTTCATGCAATC+AGG 0.443810 6_3:+4313917 Msa0934470:CDS
TTCATCACCATGGTCTGTCT+TGG 0.445182 6_3:-4315532 None:intergenic
GACTGAGAATAGTAATTCTT+CGG 0.446631 6_3:-4313324 None:intergenic
TACAATAAAGGAAGGAATCA+TGG 0.447296 6_3:-4315656 None:intergenic
TTCATCGCTAACATCACTTC+CGG 0.448222 6_3:-4313533 None:intergenic
TGTAGGCACACACGAGTACT+TGG 0.448323 6_3:+4315184 Msa0934470:CDS
GCTCAGGGAGAGGTGTCATT+TGG 0.450141 6_3:-4315124 None:intergenic
AACTCAACTGAAAATGAAGT+TGG 0.456517 6_3:+4315559 Msa0934470:three_prime_UTR
ATAGTTTCAACTGCAGTCAT+AGG 0.457366 6_3:-4312934 None:intergenic
TGCTGGCTGAATGCAGTATC+CGG 0.457718 6_3:-4314997 None:intergenic
TGCTTTGTATAAACCTCATA+AGG 0.460243 6_3:+4313579 Msa0934470:CDS
GCAATCAGGCAAAGACAACC+TGG 0.462233 6_3:+4313931 Msa0934470:CDS
GCGCGGTCAATGTCCTTTGT+AGG 0.466444 6_3:+4315167 Msa0934470:CDS
GACTGAAACACTCTCTTGCT+TGG 0.475400 6_3:+4313876 Msa0934470:CDS
CGGGGAATTCCTGATGTCAT+AGG 0.476526 6_3:-4313006 None:intergenic
ATAAGGCAAATGATATAAGA+TGG 0.476777 6_3:+4313596 Msa0934470:CDS
TACCTCTGGCGGATTCGCAC+AGG 0.478139 6_3:-4315509 None:intergenic
ATTCCGAATTCCTTGATTTG+AGG 0.480040 6_3:+4315746 Msa0934470:three_prime_UTR
ATGGTCTGTCTTGGTACCTC+TGG 0.483315 6_3:-4315523 None:intergenic
CAGGAATTCCCCGTTCTTCG+CGG 0.483458 6_3:+4313016 Msa0934470:CDS
ATGGAAGTGCTGTGGGTTGG+TGG 0.484754 6_3:+4315234 Msa0934470:CDS
GTATATCTAGCTGAACTTAG+TGG 0.485543 6_3:+4313712 Msa0934470:CDS
TTAACAACTGCTCGTTTCGA+TGG 0.500336 6_3:-4313297 None:intergenic
GATTGCATGAAGGTCGCCAC+CGG 0.501221 6_3:-4313914 None:intergenic
CCACTGTCAGCTTTGCTGCA+AGG 0.501961 6_3:+4315372 Msa0934470:CDS
ATCACTGAAACTAAAAGCTC+CGG 0.510058 6_3:+4314978 Msa0934470:CDS
CACAGCCTTCCTATGACATC+AGG 0.510819 6_3:+4312997 Msa0934470:CDS
CTTCTTACGAGTTGCAAGCT+CGG 0.513729 6_3:-4313773 None:intergenic
TCAAAGTGTGTATATAATGT+AGG 0.514064 6_3:-4313853 None:intergenic
CATGCATGTTGGATGCAGTC+TGG 0.515667 6_3:-4315032 None:intergenic
GTCTTTGCCTGATTGCATGA+AGG 0.516240 6_3:-4313924 None:intergenic
TCAAGCTGTCCGAGCTCGTG+AGG 0.518334 6_3:+4313627 Msa0934470:CDS
CAGTTCACATTGTGAAAGAA+TGG 0.524170 6_3:-4315476 None:intergenic
ACACTAACTGACTTCAGTAC+TGG 0.525255 6_3:-4313424 None:intergenic
AATGTGATGTGTAGAGTTTG+TGG 0.534944 6_3:+4315632 Msa0934470:three_prime_UTR
CCGAGCTCGTGAGGGGCCGT+TGG 0.535446 6_3:+4313636 Msa0934470:CDS
AGCATCTGTTGAGCGAGTAC+CGG 0.538884 6_3:+4313514 Msa0934470:intron
ATAAGGGAGGCCGCGAAGAA+CGG 0.539279 6_3:-4313026 None:intergenic
CCAACGGCCCCTCACGAGCT+CGG 0.541881 6_3:-4313636 None:intergenic
GTGAGGGGCCGTTGGAAATG+GGG 0.543856 6_3:+4313644 Msa0934470:CDS
CAAGCTGTCCGAGCTCGTGA+GGG 0.546501 6_3:+4313628 Msa0934470:CDS
GGTTCAGAATTCAGTTTCTG+AGG 0.551440 6_3:+4312963 Msa0934470:CDS
ATATTGAAGAGATTGGGAAG+TGG 0.554065 6_3:+4313676 Msa0934470:CDS
ATTCTAAATAATTACCAGAA+GGG 0.554776 6_3:-4315588 None:intergenic
TTTGGCCGAACACCGTTCAA+AGG 0.556119 6_3:+4315287 Msa0934470:CDS
CCCTTATATAGAAATAATCA+AGG 0.559154 6_3:+4313042 Msa0934470:CDS
TAAGGCAAATGATATAAGAT+GGG 0.559236 6_3:+4313597 Msa0934470:CDS
TGCAGTTGAAACTATTTCAG+AGG 0.562152 6_3:+4312942 Msa0934470:CDS
TGAGTTTGGTTTCATCACCA+TGG 0.565883 6_3:-4315542 None:intergenic
GAACACCGTTCAAAGGTTCT+GGG 0.569944 6_3:+4315294 Msa0934470:CDS
ATAGGAAGGCTGTGGCGTAT+CGG 0.571857 6_3:-4312988 None:intergenic
ATTGCATGAAGGTCGCCACC+GGG 0.573434 6_3:-4313913 None:intergenic
AATTCTAAATAATTACCAGA+AGG 0.574306 6_3:-4315589 None:intergenic
CGATTCCCAGAACCTTTGAA+CGG 0.574792 6_3:-4315299 None:intergenic
ACCTCTGGCGGATTCGCACA+GGG 0.585950 6_3:-4315508 None:intergenic
GACATGGAAGTGCTGTGGGT+TGG 0.586853 6_3:+4315231 Msa0934470:CDS
CCTGAAATTATTAAAGGTGA+AGG 0.587445 6_3:+4315209 Msa0934470:CDS
GAAGCTACTGAGGGCTCAGA+CGG 0.588647 6_3:+4313792 Msa0934470:CDS
ATTCTTTCACAATGTGAACT+GGG 0.590369 6_3:+4315478 Msa0934470:CDS
GTCTGTCTTGGTACCTCTGG+CGG 0.591624 6_3:-4315520 None:intergenic
ATTATTAAAGGTGAAGGACA+TGG 0.591770 6_3:+4315215 Msa0934470:CDS
TTGGCTCTGCGACTAGCTCA+GGG 0.594167 6_3:-4315139 None:intergenic
AAGCTGTCCGAGCTCGTGAG+GGG 0.594891 6_3:+4313629 Msa0934470:CDS
GCTGCAAGGGACTTGATCAG+AGG 0.597259 6_3:+4315386 Msa0934470:CDS
CTAAAATGCCCCATTTCCAA+CGG 0.602096 6_3:-4313652 None:intergenic
ATCACGAAAGAAACAATGAA+AGG 0.611280 6_3:+4313175 Msa0934470:CDS
CACCGTCTTGCCTATAGACG+CGG 0.620769 6_3:+4315431 Msa0934470:CDS
CAACTCGTAAGAAGCTACTG+AGG 0.620806 6_3:+4313782 Msa0934470:CDS
TGATTATTTCTATATAAGGG+AGG 0.623039 6_3:-4313039 None:intergenic
CTGATGTCATAGGAAGGCTG+TGG 0.626188 6_3:-4312996 None:intergenic
CTTGCAGCAAAGCTGACAGT+GGG 0.627317 6_3:-4315371 None:intergenic
GAAGGACATGGAAGTGCTGT+GGG 0.628749 6_3:+4315227 Msa0934470:CDS
AATGTGTTGGTGAGAGAAGA+CGG 0.638684 6_3:+4314882 Msa0934470:CDS
TCTGCGACTAGCTCAGGGAG+AGG 0.639914 6_3:-4315134 None:intergenic
TTTGGCTTCTGAATAGACAG+TGG 0.641108 6_3:-4313391 None:intergenic
AACTCGTAAGAAGCTACTGA+GGG 0.642428 6_3:+4313783 Msa0934470:CDS
GAATTCCTGATGTCATAGGA+AGG 0.643848 6_3:-4313002 None:intergenic
TGTGCAAGTACTCCAAAGCA+AGG 0.645177 6_3:-4314824 None:intergenic
CCTTGCAGCAAAGCTGACAG+TGG 0.646586 6_3:-4315372 None:intergenic
TGAAGGACATGGAAGTGCTG+TGG 0.652431 6_3:+4315226 Msa0934470:CDS
GCTGAATAGTAACTGTTCTG+AGG 0.653333 6_3:-4313369 None:intergenic
CCTTAAGCCTGAAAATGTGT+TGG 0.653684 6_3:+4314869 Msa0934470:CDS
CTATAGGCAAGACGGTGTTG+GGG 0.657836 6_3:-4315425 None:intergenic
GTACTCGTGTGTGCCTACAA+AGG 0.659826 6_3:-4315180 None:intergenic
AGCAACACAAGTAGTTTGAG+CGG 0.661120 6_3:+4313556 Msa0934470:CDS
AAGGGAGGCCGCGAAGAACG+GGG 0.663699 6_3:-4313024 None:intergenic
CAATCAGGCAAAGACAACCT+GGG 0.663791 6_3:+4313932 Msa0934470:CDS
AGAGGTACCAAGACAGACCA+TGG 0.663943 6_3:+4315525 Msa0934470:CDS
TAGCTGAACTTAGTGGCACA+AGG 0.668425 6_3:+4313719 Msa0934470:CDS
GTGGCGAAAAGCATGCATGT+TGG 0.669257 6_3:-4315043 None:intergenic
CTCCGCGTCTATAGGCAAGA+CGG 0.671798 6_3:-4315433 None:intergenic
TCGCAGAGCCAACAAGTGCG+CGG 0.675937 6_3:+4315150 Msa0934470:CDS
TCCCTGTGCGAATCCGCCAG+AGG 0.690698 6_3:+4315507 Msa0934470:CDS
CCCAACAACATTAAACATCG+TGG 0.694205 6_3:-4315324 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TCATTAAAATCACAAAAATT+CGG - chr6_3:4313481-4313500 None:intergenic 15.0%
!!! TTTTTTTCCTTCTAATATAA+TGG + chr6_3:4314415-4314434 Msa0934470:intron 15.0%
!!! ATAATATGTTTTCATTAATG+TGG - chr6_3:4314619-4314638 None:intergenic 15.0%
!!! CCTTGATTATTTCTATATAA+GGG - chr6_3:4313045-4313064 None:intergenic 20.0%
!!! TCCTTGATTATTTCTATATA+AGG - chr6_3:4313046-4313065 None:intergenic 20.0%
!! AGACATTATCATCATAATTA+TGG + chr6_3:4313099-4313118 Msa0934470:CDS 20.0%
!!! TTTTAGAATATTGAAGAGAT+TGG + chr6_3:4313669-4313688 Msa0934470:CDS 20.0%
!!! TTTAGAATATTGAAGAGATT+GGG + chr6_3:4313670-4313689 Msa0934470:CDS 20.0%
!! GTATATAATGTAGGTAAAAA+AGG - chr6_3:4313847-4313866 None:intergenic 20.0%
!! ATATACAACTCAAATTGAAT+AGG - chr6_3:4314072-4314091 None:intergenic 20.0%
!!! TAAGCTCTAAGAAATTATAT+CGG - chr6_3:4314317-4314336 None:intergenic 20.0%
!! GTAAAATCCATTATATTAGA+AGG - chr6_3:4314425-4314444 None:intergenic 20.0%
!! GAAACAGATATCATTTAATT+TGG + chr6_3:4314565-4314584 Msa0934470:intron 20.0%
!! ACTTGTATAATAAACACTTA+TGG + chr6_3:4314697-4314716 Msa0934470:intron 20.0%
!!! ATTTCTCTAATTTTCGTTTT+CGG + chr6_3:4314770-4314789 Msa0934470:intron 20.0%
!! ATTCTAAATAATTACCAGAA+GGG - chr6_3:4315591-4315610 None:intergenic 20.0%
!! AATTCTAAATAATTACCAGA+AGG - chr6_3:4315592-4315611 None:intergenic 20.0%
!!! TTCTTTTATACAATAAAGGA+AGG - chr6_3:4315667-4315686 None:intergenic 20.0%
!!! TGCATTCTTTTATACAATAA+AGG - chr6_3:4315671-4315690 None:intergenic 20.0%
!!! TGATTATTTCTATATAAGGG+AGG - chr6_3:4313042-4313061 None:intergenic 25.0%
! CCCTTATATAGAAATAATCA+AGG + chr6_3:4313042-4313061 Msa0934470:CDS 25.0%
!!! TTTTGTGATTTTAATGAGAG+TGG + chr6_3:4313484-4313503 Msa0934470:intron 25.0%
!!! TTTGTGATTTTAATGAGAGT+GGG + chr6_3:4313485-4313504 Msa0934470:intron 25.0%
! ATAAGGCAAATGATATAAGA+TGG + chr6_3:4313596-4313615 Msa0934470:CDS 25.0%
! TAAGGCAAATGATATAAGAT+GGG + chr6_3:4313597-4313616 Msa0934470:CDS 25.0%
! TCAAAGTGTGTATATAATGT+AGG - chr6_3:4313856-4313875 None:intergenic 25.0%
! CAGATAGATATATAATTGCA+GGG - chr6_3:4314014-4314033 None:intergenic 25.0%
! ACAGATAGATATATAATTGC+AGG - chr6_3:4314015-4314034 None:intergenic 25.0%
!! CTAAAGAAATTACATTGACT+AGG - chr6_3:4314104-4314123 None:intergenic 25.0%
! AACCAGTTTAATTAAGTACT+TGG + chr6_3:4314136-4314155 Msa0934470:intron 25.0%
! TTCCAAGTACTTAATTAAAC+TGG - chr6_3:4314141-4314160 None:intergenic 25.0%
! ATTAAGTACTTGGAATATAG+CGG + chr6_3:4314146-4314165 Msa0934470:intron 25.0%
!! TATAGCGGAAATAAATTACA+TGG + chr6_3:4314161-4314180 Msa0934470:intron 25.0%
! GATATAATTTCTTAGAGCTT+AGG + chr6_3:4314316-4314335 Msa0934470:intron 25.0%
!! TTTCTCTAATTTTCGTTTTC+GGG + chr6_3:4314771-4314790 Msa0934470:intron 25.0%
!!! TTTTTTCTCTTTGGATTTTC+CGG - chr6_3:4315078-4315097 None:intergenic 25.0%
!!! TAGTCTGAATTTTTTCTCTT+TGG - chr6_3:4315087-4315106 None:intergenic 25.0%
TCTTTGTTCCAAAAAAGATC+TGG - chr6_3:4313082-4313101 None:intergenic 30.0%
TAACTACATAGCTGTTTAGA+TGG - chr6_3:4313140-4313159 None:intergenic 30.0%
ATCACGAAAGAAACAATGAA+AGG + chr6_3:4313175-4313194 Msa0934470:CDS 30.0%
! TTCTTGCTGCATAATTTTGT+TGG - chr6_3:4313204-4313223 None:intergenic 30.0%
AGAACTTGAGTCAAAATTCT+CGG - chr6_3:4313244-4313263 None:intergenic 30.0%
GACTGAGAATAGTAATTCTT+CGG - chr6_3:4313327-4313346 None:intergenic 30.0%
TGCTTTGTATAAACCTCATA+AGG + chr6_3:4313579-4313598 Msa0934470:CDS 30.0%
CTTATATCATTTGCCTTATG+AGG - chr6_3:4313595-4313614 None:intergenic 30.0%
!!! TTAAACTGGTTTTCCAAACA+GGG - chr6_3:4314127-4314146 None:intergenic 30.0%
!!! ATTAAACTGGTTTTCCAAAC+AGG - chr6_3:4314128-4314147 None:intergenic 30.0%
GTAATTTATTTAGCCCTGTT+TGG + chr6_3:4314195-4314214 Msa0934470:intron 30.0%
! AAGAAATTATATCGGCTACT+AGG - chr6_3:4314309-4314328 None:intergenic 30.0%
GCATCATGAATACTATAAAC+AGG + chr6_3:4314371-4314390 Msa0934470:intron 30.0%
TATCAAGAAAGCTATAAGAG+AGG - chr6_3:4314591-4314610 None:intergenic 30.0%
AAGTAAGATGCTTATCCTAT+AGG + chr6_3:4314731-4314750 Msa0934470:intron 30.0%
AGTAAGATGCTTATCCTATA+GGG + chr6_3:4314732-4314751 Msa0934470:intron 30.0%
TCAATATACTTAGACCCTAT+AGG - chr6_3:4314749-4314768 None:intergenic 30.0%
CCTTCACCTTTAATAATTTC+AGG - chr6_3:4315212-4315231 None:intergenic 30.0%
CCTGAAATTATTAAAGGTGA+AGG + chr6_3:4315209-4315228 Msa0934470:CDS 30.0%
ATTATTAAAGGTGAAGGACA+TGG + chr6_3:4315215-4315234 Msa0934470:CDS 30.0%
TTCTTATACGAACTCTTGTT+TGG + chr6_3:4315269-4315288 Msa0934470:CDS 30.0%
! GAATGGATGTTGTTTGATTT+CGG - chr6_3:4315462-4315481 None:intergenic 30.0%
ATTCTTTCACAATGTGAACT+GGG + chr6_3:4315478-4315497 Msa0934470:CDS 30.0%
! ACTTCATTTTCAGTTGAGTT+TGG - chr6_3:4315559-4315578 None:intergenic 30.0%
AACTCAACTGAAAATGAAGT+TGG + chr6_3:4315559-4315578 Msa0934470:three_prime_UTR 30.0%
TACAATAAAGGAAGGAATCA+TGG - chr6_3:4315659-4315678 None:intergenic 30.0%
AAACTTTGTTCCTCAAATCA+AGG - chr6_3:4315759-4315778 None:intergenic 30.0%
ATAGTTTCAACTGCAGTCAT+AGG - chr6_3:4312937-4312956 None:intergenic 35.0%
TGCAGTTGAAACTATTTCAG+AGG + chr6_3:4312942-4312961 Msa0934470:CDS 35.0%
!!! TTCTTCCTCCAGATCTTTTT+TGG + chr6_3:4313071-4313090 Msa0934470:CDS 35.0%
TTGTTCCAAAAAAGATCTGG+AGG - chr6_3:4313079-4313098 None:intergenic 35.0%
!! AGTACTGGTGAAACTTTGTT+TGG - chr6_3:4313412-4313431 None:intergenic 35.0%
ATATTGAAGAGATTGGGAAG+TGG + chr6_3:4313676-4313695 Msa0934470:CDS 35.0%
GTATATCTAGCTGAACTTAG+TGG + chr6_3:4313712-4313731 Msa0934470:CDS 35.0%
!!! ACAACCTGGGAAGTATTTTT+CGG + chr6_3:4313945-4313964 Msa0934470:CDS 35.0%
GTAATTTCTTTAGCCCTGTT+TGG + chr6_3:4314111-4314130 Msa0934470:intron 35.0%
CTAATCTGGTTATCCAAACA+GGG - chr6_3:4314211-4314230 None:intergenic 35.0%
ACTAATCTGGTTATCCAAAC+AGG - chr6_3:4314212-4314231 None:intergenic 35.0%
!! CTATAAGTGCTGAACTAATC+TGG - chr6_3:4314225-4314244 None:intergenic 35.0%
! GATTAGTTCAGCACTTATAG+TGG + chr6_3:4314225-4314244 Msa0934470:intron 35.0%
TATCTTACGAAAAGCTCAGT+TGG - chr6_3:4314262-4314281 None:intergenic 35.0%
AGTGAAAAGAAGCAAGAAAC+TGG - chr6_3:4314347-4314366 None:intergenic 35.0%
CTGTACTTAATCAACAGCTA+TGG + chr6_3:4314541-4314560 Msa0934470:intron 35.0%
!! CAGATTTTGATCTCTCTCTA+AGG + chr6_3:4314919-4314938 Msa0934470:CDS 35.0%
!!! TGATTTTAGAGTTGGACTGA+CGG - chr6_3:4314949-4314968 None:intergenic 35.0%
!!! AGCTTTTAGTTTCAGTGATC+GGG - chr6_3:4314977-4314996 None:intergenic 35.0%
!!! GAGCTTTTAGTTTCAGTGAT+CGG - chr6_3:4314978-4314997 None:intergenic 35.0%
ATCACTGAAACTAAAAGCTC+CGG + chr6_3:4314978-4314997 Msa0934470:CDS 35.0%
TTGGCGCCTGAAATTATTAA+AGG + chr6_3:4315203-4315222 Msa0934470:CDS 35.0%
ACCACGATGTTTAATGTTGT+TGG + chr6_3:4315323-4315342 Msa0934470:CDS 35.0%
CCACGATGTTTAATGTTGTT+GGG + chr6_3:4315324-4315343 Msa0934470:CDS 35.0%
CAGTTCACATTGTGAAAGAA+TGG - chr6_3:4315479-4315498 None:intergenic 35.0%
CATTCTTTCACAATGTGAAC+TGG + chr6_3:4315477-4315496 Msa0934470:CDS 35.0%
AATGTGATGTGTAGAGTTTG+TGG + chr6_3:4315632-4315651 Msa0934470:three_prime_UTR 35.0%
! ATTCCGAATTCCTTGATTTG+AGG + chr6_3:4315746-4315765 Msa0934470:three_prime_UTR 35.0%
GTTCCTCAAATCAAGGAATT+CGG - chr6_3:4315752-4315771 None:intergenic 35.0%
GGTTCAGAATTCAGTTTCTG+AGG + chr6_3:4312963-4312982 Msa0934470:CDS 40.0%
GAATTCCTGATGTCATAGGA+AGG - chr6_3:4313005-4313024 None:intergenic 40.0%
TTAACAACTGCTCGTTTCGA+TGG - chr6_3:4313300-4313319 None:intergenic 40.0%
GCTGAATAGTAACTGTTCTG+AGG - chr6_3:4313372-4313391 None:intergenic 40.0%
! TTTGGCTTCTGAATAGACAG+TGG - chr6_3:4313394-4313413 None:intergenic 40.0%
! ACACTAACTGACTTCAGTAC+TGG - chr6_3:4313427-4313446 None:intergenic 40.0%
TTCATCGCTAACATCACTTC+CGG - chr6_3:4313536-4313555 None:intergenic 40.0%
AGCAACACAAGTAGTTTGAG+CGG + chr6_3:4313556-4313575 Msa0934470:CDS 40.0%
CTAAAATGCCCCATTTCCAA+CGG - chr6_3:4313655-4313674 None:intergenic 40.0%
AGATTGGGAAGTGGAGATAT+AGG + chr6_3:4313685-4313704 Msa0934470:CDS 40.0%
AACTCGTAAGAAGCTACTGA+GGG + chr6_3:4313783-4313802 Msa0934470:CDS 40.0%
AACACTCTCTTGCTTGGTAA+TGG + chr6_3:4313882-4313901 Msa0934470:CDS 40.0%
!!! TTGGTAATGGAGTTTTGTCC+CGG + chr6_3:4313895-4313914 Msa0934470:CDS 40.0%
GGGAGAAAGCTGAAAAAGAA+AGG - chr6_3:4313994-4314013 None:intergenic 40.0%
GGCTACTAGGTATAAATCTC+AGG - chr6_3:4314296-4314315 None:intergenic 40.0%
!!! TTTCGTTTTCGGGTTTTTGC+AGG + chr6_3:4314781-4314800 Msa0934470:intron 40.0%
!! CCAACACATTTTCAGGCTTA+AGG - chr6_3:4314872-4314891 None:intergenic 40.0%
CCTTAAGCCTGAAAATGTGT+TGG + chr6_3:4314869-4314888 Msa0934470:CDS 40.0%
! TCTCTCACCAACACATTTTC+AGG - chr6_3:4314879-4314898 None:intergenic 40.0%
! AATGTGTTGGTGAGAGAAGA+CGG + chr6_3:4314882-4314901 Msa0934470:CDS 40.0%
!!! GGGTTTGGTGATTTTAGAGT+TGG - chr6_3:4314957-4314976 None:intergenic 40.0%
TTAGTTTCAGTGATCGGGTT+TGG - chr6_3:4314972-4314991 None:intergenic 40.0%
CCCAACAACATTAAACATCG+TGG - chr6_3:4315327-4315346 None:intergenic 40.0%
! GGAGATTCTGGAAACCTTAA+AGG - chr6_3:4315353-4315372 None:intergenic 40.0%
! TGAGTTTGGTTTCATCACCA+TGG - chr6_3:4315545-4315564 None:intergenic 40.0%
TAGCTGAACTTAGTGGCACA+AGG + chr6_3:4313719-4313738 Msa0934470:CDS 45.0%
CTTCTTACGAGTTGCAAGCT+CGG - chr6_3:4313776-4313795 None:intergenic 45.0%
CAACTCGTAAGAAGCTACTG+AGG + chr6_3:4313782-4313801 Msa0934470:CDS 45.0%
GACTGAAACACTCTCTTGCT+TGG + chr6_3:4313876-4313895 Msa0934470:CDS 45.0%
GTCTTTGCCTGATTGCATGA+AGG - chr6_3:4313927-4313946 None:intergenic 45.0%
CAATCAGGCAAAGACAACCT+GGG + chr6_3:4313932-4313951 Msa0934470:CDS 45.0%
TGCTCCGAAAAATACTTCCC+AGG - chr6_3:4313952-4313971 None:intergenic 45.0%
TGCAGAAGTTCTCCTTGCTT+TGG + chr6_3:4314812-4314831 Msa0934470:CDS 45.0%
TGTGCAAGTACTCCAAAGCA+AGG - chr6_3:4314827-4314846 None:intergenic 45.0%
! TTGGAGTACTTGCACATGCT+TGG + chr6_3:4314831-4314850 Msa0934470:CDS 45.0%
! AACATGCATGCTTTTCGCCA+CGG + chr6_3:4315045-4315064 Msa0934470:CDS 45.0%
! TTTTCGCCACGGTTTCTATC+CGG + chr6_3:4315056-4315075 Msa0934470:CDS 45.0%
! GATTTTCCGGATAGAAACCG+TGG - chr6_3:4315065-4315084 None:intergenic 45.0%
CAGAACCTTTGAACGGTGTT+CGG - chr6_3:4315295-4315314 None:intergenic 45.0%
GAACACCGTTCAAAGGTTCT+GGG + chr6_3:4315294-4315313 Msa0934470:CDS 45.0%
CGATTCCCAGAACCTTTGAA+CGG - chr6_3:4315302-4315321 None:intergenic 45.0%
ATGTTGTTGGGCAGCCTTTA+AGG + chr6_3:4315336-4315355 Msa0934470:CDS 45.0%
TCTATAGGCAAGACGGTGTT+GGG - chr6_3:4315429-4315448 None:intergenic 45.0%
TTCATCACCATGGTCTGTCT+TGG - chr6_3:4315535-4315554 None:intergenic 45.0%
GAAGTTGGAATGAACCCTTC+TGG + chr6_3:4315574-4315593 Msa0934470:three_prime_UTR 45.0%
ATAGGAAGGCTGTGGCGTAT+CGG - chr6_3:4312991-4313010 None:intergenic 50.0%
CTGATGTCATAGGAAGGCTG+TGG - chr6_3:4312999-4313018 None:intergenic 50.0%
CACAGCCTTCCTATGACATC+AGG + chr6_3:4312997-4313016 Msa0934470:CDS 50.0%
CGGGGAATTCCTGATGTCAT+AGG - chr6_3:4313009-4313028 None:intergenic 50.0%
GATGCTAAGTCGTGTGAGAG+CGG + chr6_3:4313448-4313467 Msa0934470:intron 50.0%
AGCATCTGTTGAGCGAGTAC+CGG + chr6_3:4313514-4313533 Msa0934470:intron 50.0%
!! GTAATGGAGTTTTGTCCCGG+TGG + chr6_3:4313898-4313917 Msa0934470:CDS 50.0%
GCAATCAGGCAAAGACAACC+TGG + chr6_3:4313931-4313950 Msa0934470:CDS 50.0%
!! ATTTTTCGGAGCACGCTGTC+AGG + chr6_3:4313959-4313978 Msa0934470:CDS 50.0%
! TGCTGGCTGAATGCAGTATC+CGG - chr6_3:4315000-4315019 None:intergenic 50.0%
CATGCATGTTGGATGCAGTC+TGG - chr6_3:4315035-4315054 None:intergenic 50.0%
! GTGGCGAAAAGCATGCATGT+TGG - chr6_3:4315046-4315065 None:intergenic 50.0%
GTACTCGTGTGTGCCTACAA+AGG - chr6_3:4315183-4315202 None:intergenic 50.0%
TGTAGGCACACACGAGTACT+TGG + chr6_3:4315184-4315203 Msa0934470:CDS 50.0%
!! TGAAGGACATGGAAGTGCTG+TGG + chr6_3:4315226-4315245 Msa0934470:CDS 50.0%
!! GAAGGACATGGAAGTGCTGT+GGG + chr6_3:4315227-4315246 Msa0934470:CDS 50.0%
TTTGGCCGAACACCGTTCAA+AGG + chr6_3:4315287-4315306 Msa0934470:CDS 50.0%
CGAACACCGTTCAAAGGTTC+TGG + chr6_3:4315293-4315312 Msa0934470:CDS 50.0%
AAGCTGACAGTGGGAGATTC+TGG - chr6_3:4315365-4315384 None:intergenic 50.0%
CTTGCAGCAAAGCTGACAGT+GGG - chr6_3:4315374-4315393 None:intergenic 50.0%
CACTGTCAGCTTTGCTGCAA+GGG + chr6_3:4315373-4315392 Msa0934470:CDS 50.0%
! CTATAGGCAAGACGGTGTTG+GGG - chr6_3:4315428-4315447 None:intergenic 50.0%
GTCTATAGGCAAGACGGTGT+TGG - chr6_3:4315430-4315449 None:intergenic 50.0%
ATGGTCTGTCTTGGTACCTC+TGG - chr6_3:4315526-4315545 None:intergenic 50.0%
!! AGAGGTACCAAGACAGACCA+TGG + chr6_3:4315525-4315544 Msa0934470:CDS 50.0%
CAGGAATTCCCCGTTCTTCG+CGG + chr6_3:4313016-4313035 Msa0934470:CDS 55.0%
ATAAGGGAGGCCGCGAAGAA+CGG - chr6_3:4313029-4313048 None:intergenic 55.0%
GGTACTCGCTCAACAGATGC+TGG - chr6_3:4313515-4313534 None:intergenic 55.0%
GAAGCTACTGAGGGCTCAGA+CGG + chr6_3:4313792-4313811 Msa0934470:CDS 55.0%
ATTGCATGAAGGTCGCCACC+GGG - chr6_3:4313916-4313935 None:intergenic 55.0%
GATTGCATGAAGGTCGCCAC+CGG - chr6_3:4313917-4313936 None:intergenic 55.0%
GTGGCGACCTTCATGCAATC+AGG + chr6_3:4313917-4313936 Msa0934470:CDS 55.0%
TCTGGCTGCATTGCACATGC+TGG - chr6_3:4315017-4315036 None:intergenic 55.0%
!! GCTCAGGGAGAGGTGTCATT+TGG - chr6_3:4315127-4315146 None:intergenic 55.0%
!! TTGGCTCTGCGACTAGCTCA+GGG - chr6_3:4315142-4315161 None:intergenic 55.0%
GACATTGACCGCGCACTTGT+TGG - chr6_3:4315161-4315180 None:intergenic 55.0%
GCGCGGTCAATGTCCTTTGT+AGG + chr6_3:4315167-4315186 Msa0934470:CDS 55.0%
!! GACATGGAAGTGCTGTGGGT+TGG + chr6_3:4315231-4315250 Msa0934470:CDS 55.0%
!! ATGGAAGTGCTGTGGGTTGG+TGG + chr6_3:4315234-4315253 Msa0934470:CDS 55.0%
CCTTGCAGCAAAGCTGACAG+TGG - chr6_3:4315375-4315394 None:intergenic 55.0%
CCACTGTCAGCTTTGCTGCA+AGG + chr6_3:4315372-4315391 Msa0934470:CDS 55.0%
GCTGCAAGGGACTTGATCAG+AGG + chr6_3:4315386-4315405 Msa0934470:CDS 55.0%
CACCGTCTTGCCTATAGACG+CGG + chr6_3:4315431-4315450 Msa0934470:CDS 55.0%
CTCCGCGTCTATAGGCAAGA+CGG - chr6_3:4315436-4315455 None:intergenic 55.0%
TTCGGTAGCTCCGCGTCTAT+AGG - chr6_3:4315444-4315463 None:intergenic 55.0%
GTCTGTCTTGGTACCTCTGG+CGG - chr6_3:4315523-4315542 None:intergenic 55.0%
TAAGGGAGGCCGCGAAGAAC+GGG - chr6_3:4313028-4313047 None:intergenic 60.0%
TCAAGCTGTCCGAGCTCGTG+AGG + chr6_3:4313627-4313646 Msa0934470:CDS 60.0%
CAAGCTGTCCGAGCTCGTGA+GGG + chr6_3:4313628-4313647 Msa0934470:CDS 60.0%
AAGCTGTCCGAGCTCGTGAG+GGG + chr6_3:4313629-4313648 Msa0934470:CDS 60.0%
TCGTGAGGGGCCGTTGGAAA+TGG + chr6_3:4313642-4313661 Msa0934470:CDS 60.0%
CGTGAGGGGCCGTTGGAAAT+GGG + chr6_3:4313643-4313662 Msa0934470:CDS 60.0%
GTGAGGGGCCGTTGGAAATG+GGG + chr6_3:4313644-4313663 Msa0934470:CDS 60.0%
! TCTGCGACTAGCTCAGGGAG+AGG - chr6_3:4315137-4315156 None:intergenic 60.0%
!! GTTGGCTCTGCGACTAGCTC+AGG - chr6_3:4315143-4315162 None:intergenic 60.0%
TCGCAGAGCCAACAAGTGCG+CGG + chr6_3:4315150-4315169 Msa0934470:CDS 60.0%
!! GCTGTGGGTTGGTGGACGTT+CGG + chr6_3:4315242-4315261 Msa0934470:CDS 60.0%
!! CTGTGGGTTGGTGGACGTTC+GGG + chr6_3:4315243-4315262 Msa0934470:CDS 60.0%
!! ACCTCTGGCGGATTCGCACA+GGG - chr6_3:4315511-4315530 None:intergenic 60.0%
!! TACCTCTGGCGGATTCGCAC+AGG - chr6_3:4315512-4315531 None:intergenic 60.0%
AAGGGAGGCCGCGAAGAACG+GGG - chr6_3:4313027-4313046 None:intergenic 65.0%
TCCCTGTGCGAATCCGCCAG+AGG + chr6_3:4315507-4315526 Msa0934470:CDS 65.0%
CCAACGGCCCCTCACGAGCT+CGG - chr6_3:4313639-4313658 None:intergenic 70.0%
CCGAGCTCGTGAGGGGCCGT+TGG + chr6_3:4313636-4313655 Msa0934470:CDS 75.0%
Chromosome Type Strat End Strand Name
chr6_3 gene 4312925 4315786 4312925 ID=Msa0934470;Name=Msa0934470
chr6_3 mRNA 4312925 4315786 4312925 ID=Msa0934470-mRNA-1;Parent=Msa0934470;Name=Msa0934470-mRNA-1;_AED=0.15;_eAED=0.15;_QI=0|0.5|0.33|1|1|1|3|236|571
chr6_3 exon 4312925 4313438 4312925 ID=Msa0934470-mRNA-1:exon:1324;Parent=Msa0934470-mRNA-1
chr6_3 exon 4313527 4313980 4313527 ID=Msa0934470-mRNA-1:exon:1325;Parent=Msa0934470-mRNA-1
chr6_3 exon 4314803 4315786 4314803 ID=Msa0934470-mRNA-1:exon:1326;Parent=Msa0934470-mRNA-1
chr6_3 CDS 4312925 4313438 4312925 ID=Msa0934470-mRNA-1:cds;Parent=Msa0934470-mRNA-1
chr6_3 CDS 4313527 4313980 4313527 ID=Msa0934470-mRNA-1:cds;Parent=Msa0934470-mRNA-1
chr6_3 CDS 4314803 4315550 4314803 ID=Msa0934470-mRNA-1:cds;Parent=Msa0934470-mRNA-1
chr6_3 three_prime_UTR 4315551 4315786 4315551 ID=Msa0934470-mRNA-1:three_prime_utr;Parent=Msa0934470-mRNA-1
Gene Sequence

>Msa0934470

ATGGAGTCTCCTATGACTGCAGTTGAAACTATTTCAGAGGTTCAGAATTCAGTTTCTGAGGTACCGATACGCCACAGCCTTCCTATGACATCAGGAATTCCCCGTTCTTCGCGGCCTCCCTTATATAGAAATAATCAAGGAGCTTCTTCTTCCTCCAGATCTTTTTTGGAACAAAGACATTATCATCATAATTATGGAACAAAGAAGATTCACCATCTAAACAGCTATGTAGTTAATCAAAAGCATTCATATCACGAAAGAAACAATGAAAGGTTGCCAACAAAATTATGCAGCAAGAAACTGTTTGATGATGATTCCGAGAATTTTGACTCAAGTTCTGAAGTATTAGAATCTGACAATTGTATCTTAGTTCCATCGAAACGAGCAGTTGTTAATCAACCGAAGAATTACTATTCTCAGTCAGAGACTAGTTTTTGTCTTAGTCCTCAGAACAGTTACTATTCAGCCACTGTCTATTCAGAAGCCAAACAAAGTTTCACCAGTACTGAAGTCACGAGTACCGGAAGTGATGTTAGCGATGAAAGCAACACAAGTAGTTTGAGCGGTGCTTTGTATAAACCTCATAAGGCAAATGATATAAGATGGGAAGCGATTCAAGCTGTCCGAGCTCGTGAGGGGCCGTTGGAAATGGGGCATTTTAGAATATTGAAGAGATTGGGAAGTGGAGATATAGGAAATGTATATCTAGCTGAACTTAGTGGCACAAGGACTTCTTTTGCTATGAAACTCATGAACAAAACCGAGCTTGCAACTCGTAAGAAGCTACTGAGGGCTCAGACGGAAAGAGAGATATTGCAGTCTTTAGATCATCCTTTTTTACCTACATTATATACACACTTTGAGACTGAAACACTCTCTTGCTTGGTAATGGAGTTTTGTCCCGGTGGCGACCTTCATGCAATCAGGCAAAGACAACCTGGGAAGTATTTTTCGGAGCACGCTGTCAGGTTTTATGTTGCAGAAGTTCTCCTTGCTTTGGAGTACTTGCACATGCTTGGAATAATCTATAGAGACCTTAAGCCTGAAAATGTGTTGGTGAGAGAAGACGGTCATATAATGCTTTCAGATTTTGATCTCTCTCTAAGGTGCACCGTCAGTCCAACTCTAAAATCACCAAACCCGATCACTGAAACTAAAAGCTCCGGATACTGCATTCAGCCAGCATGTGCAATGCAGCCAGACTGCATCCAACATGCATGCTTTTCGCCACGGTTTCTATCCGGAAAATCCAAAGAGAAAAAATTCAGACTAAAGAATGACATGCATCACCAAATGACACCTCTCCCTGAGCTAGTCGCAGAGCCAACAAGTGCGCGGTCAATGTCCTTTGTAGGCACACACGAGTACTTGGCGCCTGAAATTATTAAAGGTGAAGGACATGGAAGTGCTGTGGGTTGGTGGACGTTCGGGATATTCTTATACGAACTCTTGTTTGGCCGAACACCGTTCAAAGGTTCTGGGAATCGAACCACGATGTTTAATGTTGTTGGGCAGCCTTTAAGGTTTCCAGAATCTCCCACTGTCAGCTTTGCTGCAAGGGACTTGATCAGAGGTTTACTTGTGAAAGAGCCCCAACACCGTCTTGCCTATAGACGCGGAGCTACCGAAATCAAACAACATCCATTCTTTCACAATGTGAACTGGGCACTGATCCCTGTGCGAATCCGCCAGAGGTACCAAGACAGACCATGGTGA
Protein sequence

>Msa0934470

MESPMTAVETISEVQNSVSEVPIRHSLPMTSGIPRSSRPPLYRNNQGASSSSRSFLEQRHYHHNYGTKKIHHLNSYVVNQKHSYHERNNERLPTKLCSKKLFDDDSENFDSSSEVLESDNCILVPSKRAVVNQPKNYYSQSETSFCLSPQNSYYSATVYSEAKQSFTSTEVTSTGSDVSDESNTSSLSGALYKPHKANDIRWEAIQAVRAREGPLEMGHFRILKRLGSGDIGNVYLAELSGTRTSFAMKLMNKTELATRKKLLRAQTEREILQSLDHPFLPTLYTHFETETLSCLVMEFCPGGDLHAIRQRQPGKYFSEHAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCTVSPTLKSPNPITETKSSGYCIQPACAMQPDCIQHACFSPRFLSGKSKEKKFRLKNDMHHQMTPLPELVAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVGWWTFGIFLYELLFGRTPFKGSGNRTTMFNVVGQPLRFPESPTVSFAARDLIRGLLVKEPQHRLAYRRGATEIKQHPFFHNVNWALIPVRIRQRYQDRPW*