AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0934360

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0934360 MtrunA17_Chr4g0058081 36.154 260 147 7 45 302 118 360 3.48e-45 160
Msa0934360 MtrunA17_Chr4g0041521 36.100 241 144 5 39 278 108 339 6.62e-44 156
Msa0934360 MtrunA17_Chr4g0041481 36.100 241 144 5 39 278 108 339 1.01e-43 156
Msa0934360 MtrunA17_Chr4g0053311 38.696 230 128 8 55 281 125 344 2.04e-41 150
Msa0934360 MtrunA17_Chr1g0208261 38.462 234 131 8 51 281 175 398 2.47e-41 153
Msa0934360 MtrunA17_Chr3g0116551 36.709 237 137 7 45 278 118 344 2.40e-40 147
Msa0934360 MtrunA17_Chr4g0041471 36.364 231 134 7 51 278 121 341 3.85e-40 146
Msa0934360 MtrunA17_Chr4g0060251 35.931 231 136 7 51 278 123 344 1.11e-39 145
Msa0934360 MtrunA17_Chr4g0024411 35.498 231 137 7 51 278 121 342 1.11e-39 145
Msa0934360 MtrunA17_Chr5g0405751 35.498 231 137 7 51 278 122 343 2.34e-39 144
Msa0934360 MtrunA17_Chr2g0319991 36.638 232 135 7 51 279 122 344 3.29e-39 144
Msa0934360 MtrunA17_Chr4g0040881 35.371 229 136 7 53 278 125 344 1.06e-38 142
Msa0934360 MtrunA17_Chr3g0134231 37.391 230 131 8 55 281 145 364 1.26e-38 145
Msa0934360 MtrunA17_Chr2g0325121 37.004 227 132 5 54 278 119 336 1.56e-38 142
Msa0934360 MtrunA17_Chr3g0142071 36.626 243 137 8 38 278 128 355 1.77e-38 144
Msa0934360 MtrunA17_Chr4g0041061 35.371 229 136 7 53 278 125 344 1.89e-38 142
Msa0934360 MtrunA17_Chr2g0311381 40.179 224 113 7 49 263 130 341 2.56e-38 142
Msa0934360 MtrunA17_Chr4g0040851 35.371 229 135 6 54 279 142 360 2.65e-38 142
Msa0934360 MtrunA17_Chr4g0041081 34.498 229 138 7 53 278 125 344 9.57e-38 140
Msa0934360 MtrunA17_Chr3g0144281 34.752 282 163 12 2 278 82 347 1.49e-37 139
Msa0934360 MtrunA17_Chr2g0315491 34.348 230 141 6 51 278 119 340 1.73e-37 139
Msa0934360 MtrunA17_Chr7g0248391 36.170 235 137 7 51 283 119 342 2.35e-37 139
Msa0934360 MtrunA17_Chr2g0283671 38.596 228 126 7 54 279 13 228 5.79e-36 132
Msa0934360 MtrunA17_Chr2g0283741 35.268 224 137 6 56 278 142 358 1.33e-35 135
Msa0934360 MtrunA17_Chr2g0311471 39.648 227 128 5 55 280 130 348 5.66e-35 132
Msa0934360 MtrunA17_Chr1g0153011 37.391 230 131 8 55 281 126 345 5.93e-35 135
Msa0934360 MtrunA17_Chr7g0248811 36.245 229 133 7 51 277 117 334 1.35e-34 131
Msa0934360 MtrunA17_Chr2g0283901 36.245 229 135 6 54 280 138 357 3.19e-32 127
Msa0934360 MtrunA17_Chr2g0311391 35.498 231 128 9 55 278 155 371 2.74e-31 123
Msa0934360 MtrunA17_Chr8g0379151 35.043 234 132 8 51 278 153 372 1.16e-29 119
Msa0934360 MtrunA17_Chr1g0156161 33.992 253 145 11 35 279 27 265 2.53e-28 112
Msa0934360 MtrunA17_Chr0c27g0493921 33.480 227 139 7 55 279 133 349 3.64e-28 114
Msa0934360 MtrunA17_Chr4g0070441 34.951 206 126 6 55 258 133 332 3.02e-27 111
Msa0934360 MtrunA17_Chr1g0155781 30.045 223 132 7 52 259 132 345 1.03e-22 99.0
Msa0934360 MtrunA17_Chr1g0199131 28.185 259 145 9 35 263 108 355 1.04e-21 96.3
Msa0934360 MtrunA17_Chr4g0035551 31.081 222 127 9 54 259 130 341 1.57e-19 89.7
Msa0934360 MtrunA17_Chr2g0283751 31.013 158 101 4 47 203 135 285 2.03e-18 85.5
Msa0934360 MtrunA17_Chr7g0248421 33.548 155 89 6 80 232 57 199 8.69e-16 75.9
Msa0934360 MtrunA17_Chr1g0156771 34.127 126 70 4 36 153 34 154 7.56e-14 69.3
Msa0934360 MtrunA17_Chr7g0248371 39.048 105 55 4 176 278 34 131 9.31e-13 65.9
Msa0934360 MtrunA17_Chr2g0283661 34.454 119 68 4 162 279 163 272 1.03e-12 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0934360 AT3G48340.1 40.870 230 124 6 51 278 124 343 2.98e-47 166
Msa0934360 AT3G43960.1 41.200 250 125 11 35 278 113 346 5.14e-43 155
Msa0934360 AT5G50260.1 36.140 285 148 11 18 278 68 342 5.23e-42 152
Msa0934360 AT3G19400.1 37.860 243 132 8 39 277 120 347 8.00e-42 152
Msa0934360 AT3G49340.1 37.826 230 129 7 51 278 123 340 2.76e-41 150
Msa0934360 AT3G48350.1 38.655 238 132 8 45 278 116 343 5.47e-41 149
Msa0934360 AT1G06260.1 35.798 257 153 5 24 278 96 342 2.58e-40 147
Msa0934360 AT4G11310.1 37.445 227 128 6 55 278 137 352 3.91e-40 147
Msa0934360 AT5G45890.1 38.158 228 127 8 55 279 130 346 5.86e-40 146
Msa0934360 AT4G11320.2 36.555 238 135 7 44 278 135 359 9.20e-40 146
Msa0934360 AT4G11320.1 36.555 238 135 7 44 278 135 359 9.20e-40 146
Msa0934360 AT5G43060.1 36.466 266 145 10 30 281 101 356 9.98e-40 148
Msa0934360 AT4G35350.1 38.696 230 129 8 51 278 133 352 4.36e-39 144
Msa0934360 AT1G20850.1 36.885 244 140 8 37 278 122 353 2.30e-38 142
Msa0934360 AT1G29090.1 38.362 232 129 8 51 278 133 354 2.63e-38 142
Msa0934360 AT1G09850.1 37.553 237 135 8 44 278 108 333 4.53e-38 143
Msa0934360 AT4G36880.1 35.965 228 133 7 54 278 144 361 4.56e-38 142
Msa0934360 AT2G27420.1 37.021 235 132 7 50 278 123 347 9.15e-38 140
Msa0934360 AT2G34080.1 36.797 231 132 8 51 278 125 344 3.36e-37 139
Msa0934360 AT1G29080.1 39.565 230 126 8 52 278 126 345 4.08e-37 139
Msa0934360 AT1G47128.1 36.179 246 143 8 38 281 122 355 1.47e-36 140
Msa0934360 AT3G19390.1 36.123 227 132 7 55 278 129 345 5.16e-35 135
Msa0934360 AT4G23520.1 35.526 228 132 8 55 278 133 349 3.01e-33 128
Msa0934360 AT1G29110.1 36.681 229 120 8 54 279 128 334 2.68e-32 125
Msa0934360 AT5G60360.1 33.186 226 141 5 55 279 141 357 3.32e-30 120
Msa0934360 AT5G60360.2 32.743 226 141 5 55 279 141 356 1.22e-29 119
Msa0934360 AT3G45310.1 31.579 228 146 5 53 279 139 357 2.04e-28 115
Msa0934360 AT3G45310.2 32.018 228 144 5 53 279 139 356 2.55e-28 115
Msa0934360 AT5G60360.3 34.146 205 129 4 55 258 141 340 2.97e-28 115
Msa0934360 AT3G19400.2 41.176 170 86 7 39 204 120 279 8.10e-28 112
Msa0934360 AT4G35350.2 40.741 162 88 7 51 210 133 288 1.95e-27 111
Msa0934360 AT3G48350.2 38.922 167 94 6 45 208 116 277 3.46e-25 105
Msa0934360 AT2G21430.1 31.364 220 125 8 54 257 131 340 1.53e-20 93.2
Msa0934360 AT4G39090.1 31.364 220 125 8 54 257 134 343 4.00e-20 92.0
Msa0934360 AT3G54940.2 28.139 231 139 8 51 263 133 354 1.84e-19 89.7
Msa0934360 AT4G16190.1 30.472 233 133 10 52 268 137 356 9.15e-19 87.8
Msa0934360 AT3G54940.3 30.263 152 94 4 51 194 133 280 6.44e-15 75.1
Msa0934360 AT1G02305.1 25.373 268 160 12 29 266 79 336 3.27e-13 71.2
Msa0934360 AT1G02300.1 26.718 262 142 11 47 263 94 350 1.92e-12 68.9

Find 158 sgRNAs with CRISPR-Local

Find 372 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTACTTCATGAATTTAATT+TGG 0.087326 6_3:+4145871 Msa0934360:exon
ACCAATTATCGATTTGATTT+TGG 0.121131 6_3:+4141294 Msa0934360:five_prime_UTR
TTTGGGCATTGACAAATATT+TGG 0.161136 6_3:+4145889 Msa0934360:three_prime_UTR
ACCAAAATCAAATCGATAAT+TGG 0.189814 6_3:-4141295 None:intergenic
CTTATATTTATAAAATTCTT+TGG 0.206129 6_3:-4143762 None:intergenic
ATAATAATTATGTCTTCTTT+TGG 0.244960 6_3:+4141348 Msa0934360:five_prime_UTR
TTATCGTGGTCGCATTGTTC+AGG 0.276214 6_3:+4142825 Msa0934360:CDS
TGGAAAATTAAGAATACATA+TGG 0.280793 6_3:+4143887 Msa0934360:CDS
AACCGGATTTGCTCGGGTCT+TGG 0.285892 6_3:+4142714 Msa0934360:CDS
GTTAACGTCATCCATTAGTT+TGG 0.288918 6_3:-4140172 None:intergenic
ATCTTTGCCCTCTTCCCTCT+TGG 0.299873 6_3:-4144845 None:intergenic
ATAATAATAATGCCTTCTTT+TGG 0.302143 6_3:+4140481 Msa0934360:five_prime_UTR
CTACTTCATGAATTTAATTT+GGG 0.309550 6_3:+4145872 Msa0934360:three_prime_UTR
TTGCATAATGTTTGCATTGT+TGG 0.310030 6_3:+4143836 Msa0934360:CDS
ACAACCCCTCCTATGGAAAT+AGG 0.318008 6_3:-4140392 None:intergenic
ATCCCACCCAATCATCGATT+TGG 0.324684 6_3:+4140428 Msa0934360:five_prime_UTR
CCTCTTCCCTCTTGGAGAAT+AGG 0.329496 6_3:-4144837 None:intergenic
CTTGTCTCTTTACCCTTGTA+AGG 0.329562 6_3:-4143602 None:intergenic
ACTTAATTGTGTCAATAGTA+TGG 0.330623 6_3:-4143862 None:intergenic
CTATTGACACAATTAAGTTT+TGG 0.330726 6_3:+4143867 Msa0934360:CDS
AAGGCTTTCGACAGCATATA+TGG 0.331974 6_3:-4143426 None:intergenic
GCGGCTTGAATCATAATTCT+TGG 0.333912 6_3:-4142764 None:intergenic
CTTATTGAAGGACAACTAAT+AGG 0.339921 6_3:-4145936 None:intergenic
CGTGCAGGTGCATCTACTTA+TGG 0.346884 6_3:+4140351 Msa0934360:intron
ATAAATATAAGGATGGGATT+TGG 0.349610 6_3:+4143774 Msa0934360:CDS
CTGGCAAATTTGAAGTCAAC+AGG 0.364435 6_3:+4145837 Msa0934360:CDS
TTTAATGATTTGAAAGAAAT+CGG 0.368928 6_3:+4144510 Msa0934360:CDS
AGAATACATATGGGAACAAA+TGG 0.368945 6_3:+4143897 Msa0934360:CDS
ACGTATATCATTGCGGTAAC+GGG 0.373174 6_3:-4143734 None:intergenic
TTATATTTATAAAATTCTTT+GGG 0.376669 6_3:-4143761 None:intergenic
ACCGGATTTGCTCGGGTCTT+GGG 0.377683 6_3:+4142715 Msa0934360:CDS
TTAACGTCATCCATTAGTTT+GGG 0.380065 6_3:-4140171 None:intergenic
GATTAAACCAAATCGATGAT+TGG 0.384436 6_3:-4140435 None:intergenic
ACTGGTCATGTAAAAGTTCC+TGG 0.395404 6_3:+4143662 Msa0934360:CDS
TCTATGCAACGAATTTCAAA+TGG 0.400811 6_3:+4146092 Msa0934360:three_prime_UTR
TCAGTAGCAACTTCACCTTT+TGG 0.405393 6_3:-4145166 None:intergenic
ATTTCCAACATTATTCTTTG+TGG 0.405740 6_3:+4146020 Msa0934360:three_prime_UTR
TGGTGCCAGTCGACCTCGTC+TGG 0.407923 6_3:-4142865 None:intergenic
TGACGAGAGTCATTTGCTTC+GGG 0.417023 6_3:+4143697 Msa0934360:CDS
CAATTCTGTACCATCTCATC+TGG 0.420799 6_3:+4144894 Msa0934360:CDS
GCTGATTATTTCGAGGTTTG+TGG 0.422496 6_3:+4144355 Msa0934360:intron
GACCGAGACATAATAGAAAC+AGG 0.423710 6_3:+4142048 Msa0934360:five_prime_UTR
GTGACGAGAGTCATTTGCTT+CGG 0.424226 6_3:+4143696 Msa0934360:CDS
GATTAATAACCGGATTTGCT+CGG 0.426263 6_3:+4142707 Msa0934360:CDS
CAATTGTCTGATGATGATAT+TGG 0.427395 6_3:+4145232 Msa0934360:CDS
TTGAATACATAAAGAGGAAC+GGG 0.427836 6_3:+4143558 Msa0934360:CDS
CTCCGGTCTTGATGTGGATA+AGG 0.429547 6_3:-4143445 None:intergenic
ACCCAAGACCCGAGCAAATC+CGG 0.430831 6_3:-4142716 None:intergenic
TTTCCAACATTATTCTTTGT+GGG 0.436183 6_3:+4146021 Msa0934360:three_prime_UTR
CTGAAATGTTGGCAAGAAAA+CGG 0.436250 6_3:+4140125 None:intergenic
ATTAAACCAAATCGATGATT+GGG 0.438106 6_3:-4140434 None:intergenic
CGAACTCGAACAATTGTTGA+TGG 0.444371 6_3:+4143809 Msa0934360:CDS
ATTAATAACCGGATTTGCTC+GGG 0.445363 6_3:+4142708 Msa0934360:CDS
AGTTCAGAAACGCTTATTGA+AGG 0.448338 6_3:-4145948 None:intergenic
GACGTTAACAAAGACAAAAC+TGG 0.452215 6_3:+4140186 Msa0934360:five_prime_UTR
TATCGTGGTCGCATTGTTCA+GGG 0.454378 6_3:+4142826 Msa0934360:CDS
TTACTCACCACATTCGCCTT+GGG 0.454880 6_3:-4142917 None:intergenic
GAAATGAATCGATTAATAAC+CGG 0.457995 6_3:+4142697 Msa0934360:intron
AATCAAATCGATAATTGGTT+GGG 0.459670 6_3:-4141290 None:intergenic
CAGATTGACAACCCCTCCTA+TGG 0.463837 6_3:-4140399 None:intergenic
TGAAATGTTGGCAAGAAAAC+GGG 0.464444 6_3:+4140126 None:intergenic
CATCTACTTATGGCTTATCA+TGG 0.464584 6_3:+4140361 Msa0934360:five_prime_UTR
GAATACATATGGGAACAAAT+GGG 0.467377 6_3:+4143898 Msa0934360:CDS
AGGATTTCGCAACGGCCATA+TGG 0.468478 6_3:-4143962 None:intergenic
AATAAAATAAATACCTGGGT+CGG 0.469818 6_3:-4140528 None:intergenic
AACGTATATCATTGCGGTAA+CGG 0.470232 6_3:-4143735 None:intergenic
CTGTGCCTATTTCCATAGGA+GGG 0.474234 6_3:+4140387 Msa0934360:five_prime_UTR
TATTTACAGGTGGGACCAAA+AGG 0.476441 6_3:+4145151 Msa0934360:intron
TAAGGATGGGATTTGGAGGA+AGG 0.477856 6_3:+4143781 Msa0934360:CDS
GATGCCATGGGACTCTTGCC+AGG 0.478933 6_3:-4145193 None:intergenic
AAATCAAATCGATAATTGGT+TGG 0.479330 6_3:-4141291 None:intergenic
AGACAACCTGGTAATAGTAT+TGG 0.480323 6_3:-4145985 None:intergenic
TACCTGTTTCTATTATGTCT+CGG 0.484505 6_3:-4142050 None:intergenic
GTTACTCACCACATTCGCCT+TGG 0.487038 6_3:-4142918 None:intergenic
GAGGAAATTAATGAACTAGT+AGG 0.488357 6_3:+4144134 Msa0934360:CDS
CCTATTCTCCAAGAGGGAAG+AGG 0.488545 6_3:+4144837 Msa0934360:CDS
CGACAGCATATATGGAAGCC+AGG 0.489445 6_3:-4143418 None:intergenic
ATAAAATAAATACCTGGGTC+GGG 0.491291 6_3:-4140527 None:intergenic
CTATGCAACGAATTTCAAAT+GGG 0.494425 6_3:+4146093 Msa0934360:three_prime_UTR
ACTTGCCAGACGAGGTCGAC+TGG 0.496853 6_3:+4142860 Msa0934360:CDS
AAAGTTCCTGGTCATGGAAA+CGG 0.503181 6_3:+4143674 Msa0934360:CDS
GGAAAATTAAGAATACATAT+GGG 0.503475 6_3:+4143888 Msa0934360:CDS
CATGTAAAAGTTCCTGGTCA+TGG 0.508992 6_3:+4143668 Msa0934360:CDS
TCTTGAAGAATTAAGCGCTC+AGG 0.509616 6_3:+4143469 Msa0934360:CDS
AATCCCACAAAGAATAATGT+TGG 0.509955 6_3:-4146024 None:intergenic
CTAGTACTACATACCTGGGT+CGG 0.512737 6_3:-4141389 None:intergenic
CTCGCTCCGTTACATATCCT+AGG 0.513599 6_3:+4142890 Msa0934360:CDS
GTGAATAAAATCAATTTCAC+AGG 0.514000 6_3:-4146131 None:intergenic
ACTGTGCCTATTTCCATAGG+AGG 0.515188 6_3:+4140386 Msa0934360:five_prime_UTR
AATATAAGGATGGGATTTGG+AGG 0.521520 6_3:+4143777 Msa0934360:CDS
GGGAAGAGAGTTAAAATCAC+TGG 0.524252 6_3:+4143644 Msa0934360:CDS
TGTGCCTATTTCCATAGGAG+GGG 0.527905 6_3:+4140388 Msa0934360:five_prime_UTR
CAAAGGATGTTGCTATGCCC+TGG 0.527946 6_3:+4143400 Msa0934360:intron
AAGAAAGCTACCTCTAGCAC+AGG 0.528209 6_3:-4144001 None:intergenic
ATGTGGATTGAAAGAGATTG+CGG 0.533688 6_3:+4143935 Msa0934360:CDS
CGCTTTCCTATTCTCCAAGA+GGG 0.533886 6_3:+4144831 Msa0934360:CDS
CTATTCTCCAAGAGGGAAGA+GGG 0.534610 6_3:+4144838 Msa0934360:CDS
GGATTTGCTCGGGTCTTGGG+TGG 0.537985 6_3:+4142718 Msa0934360:CDS
TGAGATGGTACAGAATTGAT+TGG 0.538514 6_3:-4144889 None:intergenic
AGAGATTGCGGATTACCATA+TGG 0.538911 6_3:+4143947 Msa0934360:CDS
TAGTACTACATACCTGGGTC+GGG 0.539168 6_3:-4141388 None:intergenic
AGCCTTATCCACATCAAGAC+CGG 0.539452 6_3:+4143443 Msa0934360:CDS
AATCAATAAGAATAGAAAGA+TGG 0.540357 6_3:+4145282 Msa0934360:CDS
TTGTCTCTTTACCCTTGTAA+GGG 0.542447 6_3:-4143601 None:intergenic
GTTACTGTGCCTATTTCCAT+AGG 0.543664 6_3:+4140383 Msa0934360:five_prime_UTR
AGATGTCGTCTCTCTAAAAG+AGG 0.544043 6_3:+4143623 Msa0934360:CDS
AAATTTGCCAGCACGATGAT+CGG 0.545669 6_3:-4145825 None:intergenic
AGGTATTTGAATACATAAAG+AGG 0.546368 6_3:+4143552 Msa0934360:CDS
TAATTTCCAATACTATTACC+AGG 0.547032 6_3:+4145979 Msa0934360:three_prime_UTR
AAACCAAATCGATGATTGGG+TGG 0.560538 6_3:-4140431 None:intergenic
CATTCGCCTTGGGCAACCCT+AGG 0.563425 6_3:-4142907 None:intergenic
CTGTACCTAAAAGTCATAGC+AGG 0.566003 6_3:+4140214 Msa0934360:five_prime_UTR
TGACAGAGGTAACGGTAACA+AGG 0.570296 6_3:+4143505 Msa0934360:CDS
CTAAACAATACCAGATGAGA+TGG 0.572125 6_3:-4144904 None:intergenic
AGTGGCAACAGCAGATGCCA+TGG 0.575266 6_3:-4145206 None:intergenic
GATATGTAACGGAGCGAGCA+TGG 0.575738 6_3:-4142885 None:intergenic
GTGGCAACAGCAGATGCCAT+GGG 0.576151 6_3:-4145205 None:intergenic
ACAATTACCGATCATCGTGC+TGG 0.579960 6_3:+4145818 Msa0934360:CDS
TCGTGGTCGCATTGTTCAGG+GGG 0.582354 6_3:+4142828 Msa0934360:CDS
GCTTAATTCTTCAAGAACTC+CGG 0.584191 6_3:-4143462 None:intergenic
TTTGAATACATAAAGAGGAA+CGG 0.584506 6_3:+4143557 Msa0934360:CDS
TCGTCACCGTTTCCATGACC+AGG 0.586625 6_3:-4143680 None:intergenic
TCATTTGCAGGGCACTGAAG+AGG 0.587334 6_3:+4144115 Msa0934360:intron
ATCGTGGTCGCATTGTTCAG+GGG 0.591913 6_3:+4142827 Msa0934360:CDS
CAAGAACTCCGGTCTTGATG+TGG 0.594900 6_3:-4143451 None:intergenic
AGGGTTGCCCAAGGCGAATG+TGG 0.595130 6_3:+4142910 Msa0934360:CDS
AATACATATGGGAACAAATG+GGG 0.598223 6_3:+4143899 Msa0934360:CDS
AACGGTAACAAGGGATGTAA+CGG 0.598475 6_3:+4143515 Msa0934360:CDS
TCGCTCCGTTACATATCCTA+GGG 0.601139 6_3:+4142891 Msa0934360:CDS
GTGTCTTGTGACAGAGGTAA+CGG 0.607196 6_3:+4143497 Msa0934360:CDS
TGGACACTGAACAGTTTCAG+TGG 0.608580 6_3:+4144375 Msa0934360:CDS
CAGGATAATGAGCATCGAGA+AGG 0.609449 6_3:-4143982 None:intergenic
ATACATATGGGAACAAATGG+GGG 0.611571 6_3:+4143900 Msa0934360:CDS
GACAGCATATATGGAAGCCA+GGG 0.611978 6_3:-4143417 None:intergenic
ATATCATCATCAGACAATTG+TGG 0.612089 6_3:-4145229 None:intergenic
TGCTCATTATCCTGTGCTAG+AGG 0.625163 6_3:+4143991 Msa0934360:CDS
TACTACATACCTGGGTCGGG+TGG 0.626200 6_3:-4141385 None:intergenic
AAATAAATACCTGGGTCGGG+TGG 0.626403 6_3:-4140524 None:intergenic
AACCAAATCGATGATTGGGT+GGG 0.626947 6_3:-4140430 None:intergenic
GCAACCTGGCAAGAGTCCCA+TGG 0.627514 6_3:+4145189 Msa0934360:CDS
GACAACTAATAGGCTCAACT+AGG 0.630668 6_3:-4145926 None:intergenic
GATGTCGTCTCTCTAAAAGA+GGG 0.630983 6_3:+4143624 Msa0934360:CDS
TATAGAAAATAAAGACAACC+TGG 0.632473 6_3:-4145997 None:intergenic
GAAATCGTGTCTTGTGACAG+AGG 0.634008 6_3:+4143491 Msa0934360:CDS
ATTGCTGTCTCTGCATATGA+CGG 0.635815 6_3:-4145262 None:intergenic
GGGATTAACGTATATCATTG+CGG 0.637029 6_3:-4143741 None:intergenic
ATCATCAGACAATTGTGGAG+TGG 0.637497 6_3:-4145224 None:intergenic
GGCAACCCTAGGATATGTAA+CGG 0.640932 6_3:-4142896 None:intergenic
CGTCTCTGACTTGCCAGACG+AGG 0.642134 6_3:+4142852 Msa0934360:CDS
TACTTACTCAGATCTAAGAG+AGG 0.648220 6_3:-4140263 None:intergenic
GAAGTTGCTACTGAGCAACC+TGG 0.650794 6_3:+4145175 Msa0934360:CDS
GCGCTTTCCTATTCTCCAAG+AGG 0.651050 6_3:+4144830 Msa0934360:CDS
ACATATCCTAGGGTTGCCCA+AGG 0.661221 6_3:+4142901 Msa0934360:CDS
ACTCAGATCTAAGAGAGGAG+CGG 0.677993 6_3:-4140258 None:intergenic
GACAGAGGTAACGGTAACAA+GGG 0.680528 6_3:+4143506 Msa0934360:CDS
TGGCAAATTTGAAGTCAACA+GGG 0.696531 6_3:+4145838 Msa0934360:CDS
CATCGAGAAGGATTTCGCAA+CGG 0.698659 6_3:-4143970 None:intergenic
GGTAACAAGGGATGTAACGG+AGG 0.721444 6_3:+4143518 Msa0934360:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATAATAAAATAAATACCT+GGG - chr6_3:4140535-4140554 None:intergenic 10.0%
!! AATATAATAAAATAAATACC+TGG - chr6_3:4140536-4140555 None:intergenic 10.0%
!! ATAAATCTAATTATTACTAT+TGG + chr6_3:4140563-4140582 Msa0934360:intron 10.0%
!! TAAATCTAATTATTACTATT+GGG + chr6_3:4140564-4140583 Msa0934360:intron 10.0%
!! ATTGAAACAAAAAAAAATAA+AGG + chr6_3:4140972-4140991 Msa0934360:intron 10.0%
!! TGTTACATAAAATTAAATTA+AGG + chr6_3:4141002-4141021 Msa0934360:intron 10.0%
!! GTTACATAAAATTAAATTAA+GGG + chr6_3:4141003-4141022 Msa0934360:intron 10.0%
!! TTTAAACATATAAATAGAAA+AGG - chr6_3:4141153-4141172 None:intergenic 10.0%
!! CATTAAATAATTTATGTATT+TGG - chr6_3:4141546-4141565 None:intergenic 10.0%
!! TTGAAAATCAATAATATTAT+GGG - chr6_3:4141755-4141774 None:intergenic 10.0%
!! TTTGAAAATCAATAATATTA+TGG - chr6_3:4141756-4141775 None:intergenic 10.0%
!!! ATTTATTTTGACAAATAAAA+AGG + chr6_3:4142479-4142498 Msa0934360:intron 10.0%
!! CTTATATTTATAAAATTCTT+TGG - chr6_3:4143765-4143784 None:intergenic 10.0%
!!! CAAAGAATTTTATAAATATA+AGG + chr6_3:4143763-4143782 Msa0934360:CDS 10.0%
!!! AATTTTATAAATATAAGGAT+GGG + chr6_3:4143768-4143787 Msa0934360:CDS 10.0%
!!! CACTTTTTTTTTTATTAAAT+GGG + chr6_3:4144407-4144426 Msa0934360:intron 10.0%
!! TAGATATATTAATGATATAT+TGG + chr6_3:4144924-4144943 Msa0934360:intron 10.0%
!! ACAAAAAAAAAAAAAAAACA+GGG - chr6_3:4145763-4145782 None:intergenic 10.0%
!! TACAAAAAAAAAAAAAAAAC+AGG - chr6_3:4145764-4145783 None:intergenic 10.0%
!!! TGTTTTTTTTTTTTTTTTGT+AGG + chr6_3:4145763-4145782 Msa0934360:intron 10.0%
!!! GTTTTTTTTTTTTTTTTGTA+GGG + chr6_3:4145764-4145783 Msa0934360:intron 10.0%
!!! TTTTTTTTTTTTTTTTGTAG+GGG + chr6_3:4145765-4145784 Msa0934360:intron 10.0%
!! ATATAATTAAACACGTAAAT+AGG - chr6_3:4140305-4140324 None:intergenic 15.0%
!!! ATAATAATTATGTCTTCTTT+TGG + chr6_3:4141348-4141367 Msa0934360:five_prime_UTR 15.0%
!!! TAATAATTATGTCTTCTTTT+GGG + chr6_3:4141349-4141368 Msa0934360:five_prime_UTR 15.0%
!!! ATTAATTGTCTTTTGTAAAT+AGG + chr6_3:4141576-4141595 Msa0934360:intron 15.0%
!!! AATTTTACAAAATCAATTCA+TGG - chr6_3:4142227-4142246 None:intergenic 15.0%
!! CAAAATATATATAATCACTA+AGG - chr6_3:4142432-4142451 None:intergenic 15.0%
!! TACATCATTGAAATAAAAAA+GGG - chr6_3:4143010-4143029 None:intergenic 15.0%
!! ATACATCATTGAAATAAAAA+AGG - chr6_3:4143011-4143030 None:intergenic 15.0%
!!! ATTTGTTGTTATATATGTTT+GGG + chr6_3:4143372-4143391 Msa0934360:intron 15.0%
!!! GAATTTTATAAATATAAGGA+TGG + chr6_3:4143767-4143786 Msa0934360:CDS 15.0%
!! AATAAATGATAAATAGTTGT+GGG - chr6_3:4144060-4144079 None:intergenic 15.0%
!! AAATAAATGATAAATAGTTG+TGG - chr6_3:4144061-4144080 None:intergenic 15.0%
!!! GCACTTTTTTTTTTATTAAA+TGG + chr6_3:4144406-4144425 Msa0934360:intron 15.0%
!! TTTAATGATTTGAAAGAAAT+CGG + chr6_3:4144510-4144529 Msa0934360:CDS 15.0%
!!! AAAAAAACATTTGATTTCAA+CGG - chr6_3:4144552-4144571 None:intergenic 15.0%
!!! TTTTTAATTTAGTTATGTAG+AGG - chr6_3:4145034-4145053 None:intergenic 15.0%
!!! TTTTTTTTTTTTTTTGTAGG+GGG + chr6_3:4145766-4145785 Msa0934360:intron 15.0%
!!! TTTTTTAAAACCCAAACTAA+TGG + chr6_3:4140161-4140180 Msa0934360:five_prime_UTR 20.0%
!!! ATAATAATAATGCCTTCTTT+TGG + chr6_3:4140481-4140500 Msa0934360:five_prime_UTR 20.0%
!! ATTAAAAACAATCCAAAAGA+AGG - chr6_3:4140496-4140515 None:intergenic 20.0%
!!! TTTTATTGCAAATAAAGTCT+TGG + chr6_3:4140812-4140831 Msa0934360:intron 20.0%
!!! CAATGTAAAACTACTATTTT+TGG - chr6_3:4141671-4141690 None:intergenic 20.0%
!!! CAAAAATAGTAGTTTTACAT+TGG + chr6_3:4141669-4141688 Msa0934360:intron 20.0%
!!! TAGTTTTAAGATCATTTGAT+TGG - chr6_3:4142021-4142040 None:intergenic 20.0%
!! GACTCTAATTAAAAAAACAT+TGG + chr6_3:4142355-4142374 Msa0934360:intron 20.0%
!! ATATATAATCACTAAGGTTA+TGG - chr6_3:4142426-4142445 None:intergenic 20.0%
!!! GTAAATTTTTAACTAAAGTG+AGG - chr6_3:4142511-4142530 None:intergenic 20.0%
!! CTGATTTAAACAAAAATTTG+CGG - chr6_3:4142786-4142805 None:intergenic 20.0%
!! TTTCATAAGCTATAATAAGT+TGG + chr6_3:4143269-4143288 Msa0934360:intron 20.0%
!!! CATTTGTTGTTATATATGTT+TGG + chr6_3:4143371-4143390 Msa0934360:intron 20.0%
!! TGGAAAATTAAGAATACATA+TGG + chr6_3:4143887-4143906 Msa0934360:CDS 20.0%
!! GGAAAATTAAGAATACATAT+GGG + chr6_3:4143888-4143907 Msa0934360:CDS 20.0%
!!! CTTTTTGAATAGATTTATAC+CGG + chr6_3:4144184-4144203 Msa0934360:CDS 20.0%
!!! ATTTTGTTCTGTTTCTTTAT+TGG + chr6_3:4144444-4144463 Msa0934360:intron 20.0%
!!! CAGAAAACAAATTGATTTAT+TGG - chr6_3:4144773-4144792 None:intergenic 20.0%
!! AATCAATAAGAATAGAAAGA+TGG + chr6_3:4145282-4145301 Msa0934360:CDS 20.0%
!! TAAAATGCATGTCTATATAT+TGG + chr6_3:4145466-4145485 Msa0934360:intron 20.0%
!! AAAAAAAAAAAAACAGGGTA+AGG - chr6_3:4145758-4145777 None:intergenic 20.0%
!!! CTACTTCATGAATTTAATTT+GGG + chr6_3:4145872-4145891 Msa0934360:three_prime_UTR 20.0%
!!! TAGTTTGGGTTTTAAAAAAC+TGG - chr6_3:4140160-4140179 None:intergenic 25.0%
! ATTAAACCAAATCGATGATT+GGG - chr6_3:4140437-4140456 None:intergenic 25.0%
! AATAAAATAAATACCTGGGT+CGG - chr6_3:4140531-4140550 None:intergenic 25.0%
! TCTAATTATTACTATTGGGA+TGG + chr6_3:4140568-4140587 Msa0934360:intron 25.0%
! AAGAATTGAAACCAAATTCA+AGG + chr6_3:4140856-4140875 Msa0934360:intron 25.0%
! ATTGACATGACAAATTTACA+AGG - chr6_3:4141047-4141066 None:intergenic 25.0%
! TATCTACTTATGGCTTATAA+TGG + chr6_3:4141219-4141238 Msa0934360:intron 25.0%
!!! TTACTGTGCTTATTTTTCAT+AGG + chr6_3:4141242-4141261 Msa0934360:intron 25.0%
! AATCAAATCGATAATTGGTT+GGG - chr6_3:4141293-4141312 None:intergenic 25.0%
! AAATCAAATCGATAATTGGT+TGG - chr6_3:4141294-4141313 None:intergenic 25.0%
!!! ACCAATTATCGATTTGATTT+TGG + chr6_3:4141294-4141313 Msa0934360:five_prime_UTR 25.0%
! ACCAAAATCAAATCGATAAT+TGG - chr6_3:4141298-4141317 None:intergenic 25.0%
! GTCAACTTTCTCTTATAAAT+AGG - chr6_3:4141477-4141496 None:intergenic 25.0%
!!! TACTATTTTTGGTTTCCTTA+GGG - chr6_3:4141660-4141679 None:intergenic 25.0%
! CTAAACTTTGAATCAAACAT+AGG - chr6_3:4141788-4141807 None:intergenic 25.0%
! AAACACATAATGAAATCTAG+AGG - chr6_3:4141813-4141832 None:intergenic 25.0%
! TCTAGATTTCATTATGTGTT+TGG + chr6_3:4141812-4141831 Msa0934360:intron 25.0%
! ATAATAGAAACAGGTAACAA+TGG + chr6_3:4142057-4142076 Msa0934360:intron 25.0%
!! TTTAATTAGAGTCGTGATTT+TGG - chr6_3:4142348-4142367 None:intergenic 25.0%
! ACAAAAAGCTAACATAACAT+TGG + chr6_3:4142537-4142556 Msa0934360:intron 25.0%
! CAAAAAGCTAACATAACATT+GGG + chr6_3:4142538-4142557 Msa0934360:intron 25.0%
! GAAAATGTAATGAATGAATG+AGG - chr6_3:4142621-4142640 None:intergenic 25.0%
! GATTCATTTCTGTGAAAATT+GGG - chr6_3:4142687-4142706 None:intergenic 25.0%
! GAAATGAATCGATTAATAAC+CGG + chr6_3:4142697-4142716 Msa0934360:intron 25.0%
! CAATTATTAGCTACTTATTG+TGG - chr6_3:4143095-4143114 None:intergenic 25.0%
! CTTATCATGATAAGTGATTA+TGG + chr6_3:4143205-4143224 Msa0934360:intron 25.0%
! AGGAAAGCTTAATGAAATAA+GGG - chr6_3:4143315-4143334 None:intergenic 25.0%
! AAGGAAAGCTTAATGAAATA+AGG - chr6_3:4143316-4143335 None:intergenic 25.0%
!! ATGTATTCAAATACCTTTTG+AGG - chr6_3:4143548-4143567 None:intergenic 25.0%
! AGGTATTTGAATACATAAAG+AGG + chr6_3:4143552-4143571 Msa0934360:CDS 25.0%
! TTTGAATACATAAAGAGGAA+CGG + chr6_3:4143557-4143576 Msa0934360:CDS 25.0%
! ATAAATATAAGGATGGGATT+TGG + chr6_3:4143774-4143793 Msa0934360:CDS 25.0%
! ACTTAATTGTGTCAATAGTA+TGG - chr6_3:4143865-4143884 None:intergenic 25.0%
!! CTATTGACACAATTAAGTTT+TGG + chr6_3:4143867-4143886 Msa0934360:CDS 25.0%
! TCTTAAAAAACTCATTTGCA+GGG + chr6_3:4144104-4144123 Msa0934360:intron 25.0%
! AATCTATTCAAAAAGCTCTT+AGG - chr6_3:4144179-4144198 None:intergenic 25.0%
! AAGAAACAGAACAAAATTGT+GGG - chr6_3:4144441-4144460 None:intergenic 25.0%
! AAAGAAACAGAACAAAATTG+TGG - chr6_3:4144442-4144461 None:intergenic 25.0%
!!! TGTGTTTTTTTCTTGTTTTG+TGG + chr6_3:4144474-4144493 Msa0934360:intron 25.0%
!!! TCAATTTGTTTTCTGTTTTC+TGG + chr6_3:4144778-4144797 Msa0934360:intron 25.0%
! TTAGTTATGTAGAGGATAAA+TGG - chr6_3:4145026-4145045 None:intergenic 25.0%
! AAACTCTAATTATTTACAGG+TGG + chr6_3:4145141-4145160 Msa0934360:intron 25.0%
! AACTCTAATTATTTACAGGT+GGG + chr6_3:4145142-4145161 Msa0934360:intron 25.0%
! ATGTAAAACTCTTGTTCAAT+AGG - chr6_3:4145352-4145371 None:intergenic 25.0%
!! AAATTTTTGAATTGTGTGAC+TGG + chr6_3:4145499-4145518 Msa0934360:intron 25.0%
!!! TGCAACAAATGTCTATTTTT+AGG + chr6_3:4145552-4145571 Msa0934360:intron 25.0%
! TGTATAAAACTTACAAGTGT+AGG + chr6_3:4145577-4145596 Msa0934360:intron 25.0%
! TACAAAGAAAGAAGAAACAA+TGG + chr6_3:4145600-4145619 Msa0934360:intron 25.0%
! ACAAAGAAAGAAGAAACAAT+GGG + chr6_3:4145601-4145620 Msa0934360:intron 25.0%
! CAGATAAATAAACAATCCAA+GGG - chr6_3:4145631-4145650 None:intergenic 25.0%
! TGTTTATATGTTCTTAAACG+AGG - chr6_3:4145655-4145674 None:intergenic 25.0%
! AAATAAAAATAAACTGGTGG+TGG - chr6_3:4145718-4145737 None:intergenic 25.0%
! AGCAAATAAAAATAAACTGG+TGG - chr6_3:4145721-4145740 None:intergenic 25.0%
! GGAAGCAAATAAAAATAAAC+TGG - chr6_3:4145724-4145743 None:intergenic 25.0%
! GCTACTTCATGAATTTAATT+TGG + chr6_3:4145871-4145890 Msa0934360:exon 25.0%
! TAATTTCCAATACTATTACC+AGG + chr6_3:4145979-4145998 Msa0934360:three_prime_UTR 25.0%
! TATAGAAAATAAAGACAACC+TGG - chr6_3:4146000-4146019 None:intergenic 25.0%
! ATTTCCAACATTATTCTTTG+TGG + chr6_3:4146020-4146039 Msa0934360:three_prime_UTR 25.0%
! TTTCCAACATTATTCTTTGT+GGG + chr6_3:4146021-4146040 Msa0934360:three_prime_UTR 25.0%
!! ATAGAGAATTGCATATTTTG+TGG - chr6_3:4146077-4146096 None:intergenic 25.0%
! GTGAATAAAATCAATTTCAC+AGG - chr6_3:4146134-4146153 None:intergenic 25.0%
!!! TTGGGTTTTAAAAAACTGGT+TGG - chr6_3:4140156-4140175 None:intergenic 30.0%
! TTAACGTCATCCATTAGTTT+GGG - chr6_3:4140174-4140193 None:intergenic 30.0%
GATTAAACCAAATCGATGAT+TGG - chr6_3:4140438-4140457 None:intergenic 30.0%
ATAAAATAAATACCTGGGTC+GGG - chr6_3:4140530-4140549 None:intergenic 30.0%
!! TGTGCTTATTTTTCATAGGA+GGG + chr6_3:4141246-4141265 Msa0934360:intron 30.0%
AATACTAGTACTACATACCT+GGG - chr6_3:4141396-4141415 None:intergenic 30.0%
AAATACTAGTACTACATACC+TGG - chr6_3:4141397-4141416 None:intergenic 30.0%
CTTTCTCTTATAAATAGGAC+CGG - chr6_3:4141472-4141491 None:intergenic 30.0%
! TTGTCTTTTGTAAATAGGAC+CGG + chr6_3:4141581-4141600 Msa0934360:intron 30.0%
! TGGTTTGGACGAATAATATT+AGG + chr6_3:4141618-4141637 Msa0934360:intron 30.0%
GGTTTGGACGAATAATATTA+GGG + chr6_3:4141619-4141638 Msa0934360:intron 30.0%
!!! CTACTATTTTTGGTTTCCTT+AGG - chr6_3:4141661-4141680 None:intergenic 30.0%
AATGCTAAATATTGCCCTTA+GGG - chr6_3:4141731-4141750 None:intergenic 30.0%
AAATGCTAAATATTGCCCTT+AGG - chr6_3:4141732-4141751 None:intergenic 30.0%
!! TTAGATTTTTGAGCGAGTTT+TGG + chr6_3:4141989-4142008 Msa0934360:intron 30.0%
!! TACCTGTTTCTATTATGTCT+CGG - chr6_3:4142053-4142072 None:intergenic 30.0%
ATGACTATTGAACCCTTTAT+GGG - chr6_3:4142593-4142612 None:intergenic 30.0%
AATGACTATTGAACCCTTTA+TGG - chr6_3:4142594-4142613 None:intergenic 30.0%
TTCTGTGAAAATTGGGTTTA+CGG - chr6_3:4142680-4142699 None:intergenic 30.0%
CGATTCATTTCTGTGAAAAT+TGG - chr6_3:4142688-4142707 None:intergenic 30.0%
TGTAAACTTGTATACAAGAG+AGG + chr6_3:4143030-4143049 Msa0934360:intron 30.0%
TATAAGCAGTTTATCCAAAC+AGG - chr6_3:4143176-4143195 None:intergenic 30.0%
! TAATGAAATAAGGGCTTGTT+TGG - chr6_3:4143306-4143325 None:intergenic 30.0%
TTGAATACATAAAGAGGAAC+GGG + chr6_3:4143558-4143577 Msa0934360:CDS 30.0%
TGAAAAAGATTTCCCTTACA+AGG + chr6_3:4143589-4143608 Msa0934360:CDS 30.0%
GAAAAAGATTTCCCTTACAA+GGG + chr6_3:4143590-4143609 Msa0934360:CDS 30.0%
TTGCATAATGTTTGCATTGT+TGG + chr6_3:4143836-4143855 Msa0934360:CDS 30.0%
AGAATACATATGGGAACAAA+TGG + chr6_3:4143897-4143916 Msa0934360:CDS 30.0%
GAATACATATGGGAACAAAT+GGG + chr6_3:4143898-4143917 Msa0934360:CDS 30.0%
AATACATATGGGAACAAATG+GGG + chr6_3:4143899-4143918 Msa0934360:CDS 30.0%
!!! CTGCAAATGAGTTTTTTAAG+AGG - chr6_3:4144105-4144124 None:intergenic 30.0%
CTCTTAAAAAACTCATTTGC+AGG + chr6_3:4144103-4144122 Msa0934360:intron 30.0%
GAGGAAATTAATGAACTAGT+AGG + chr6_3:4144134-4144153 Msa0934360:CDS 30.0%
TGAATAGATTTATACCGGTA+AGG + chr6_3:4144189-4144208 Msa0934360:intron 30.0%
AATGGTTATAAAGTCCTTAC+CGG - chr6_3:4144206-4144225 None:intergenic 30.0%
ACCATTCTAAATAGAAGTTG+TGG + chr6_3:4144220-4144239 Msa0934360:intron 30.0%
ATAATCAGCTGCAAAAAAGA+AGG - chr6_3:4144344-4144363 None:intergenic 30.0%
! TGTTTTGTGGTATATATTGC+AGG + chr6_3:4144487-4144506 Msa0934360:intron 30.0%
ATAAAGCAAGCACAATTAAG+AGG - chr6_3:4144581-4144600 None:intergenic 30.0%
! TGTCACAATTTTACATCAAG+TGG - chr6_3:4144638-4144657 None:intergenic 30.0%
! CTTTAACTTAGTTTAGTGTC+AGG + chr6_3:4144964-4144983 Msa0934360:intron 30.0%
TACGCACTAATTGATACATA+TGG - chr6_3:4144998-4145017 None:intergenic 30.0%
CAAAACAGTAAGATTGCAAT+GGG - chr6_3:4145089-4145108 None:intergenic 30.0%
ACAAAACAGTAAGATTGCAA+TGG - chr6_3:4145090-4145109 None:intergenic 30.0%
ATATCATCATCAGACAATTG+TGG - chr6_3:4145232-4145251 None:intergenic 30.0%
! CAATTGTCTGATGATGATAT+TGG + chr6_3:4145232-4145251 Msa0934360:CDS 30.0%
TTAGAATTGGATATGCACAT+TGG + chr6_3:4145433-4145452 Msa0934360:intron 30.0%
CCAGATAAATAAACAATCCA+AGG - chr6_3:4145632-4145651 None:intergenic 30.0%
CCTTGGATTGTTTATTTATC+TGG + chr6_3:4145629-4145648 Msa0934360:intron 30.0%
AAAAAAAACAGGGTAAGGAA+TGG - chr6_3:4145753-4145772 None:intergenic 30.0%
!! TTTGGGCATTGACAAATATT+TGG + chr6_3:4145889-4145908 Msa0934360:three_prime_UTR 30.0%
CTTATTGAAGGACAACTAAT+AGG - chr6_3:4145939-4145958 None:intergenic 30.0%
AATCCCACAAAGAATAATGT+TGG - chr6_3:4146027-4146046 None:intergenic 30.0%
TCTATGCAACGAATTTCAAA+TGG + chr6_3:4146092-4146111 Msa0934360:three_prime_UTR 30.0%
CTATGCAACGAATTTCAAAT+GGG + chr6_3:4146093-4146112 Msa0934360:three_prime_UTR 30.0%
!!! GTTTTAAAAAACTGGTTGGC+TGG - chr6_3:4140152-4140171 None:intergenic 35.0%
GTTAACGTCATCCATTAGTT+TGG - chr6_3:4140175-4140194 None:intergenic 35.0%
GACGTTAACAAAGACAAAAC+TGG + chr6_3:4140186-4140205 Msa0934360:five_prime_UTR 35.0%
! TGTAACCTGCTATGACTTTT+AGG - chr6_3:4140222-4140241 None:intergenic 35.0%
TACTTACTCAGATCTAAGAG+AGG - chr6_3:4140266-4140285 None:intergenic 35.0%
CATCTACTTATGGCTTATCA+TGG + chr6_3:4140361-4140380 Msa0934360:five_prime_UTR 35.0%
!! CTGTGCTTATTTTTCATAGG+AGG + chr6_3:4141245-4141264 Msa0934360:intron 35.0%
TCTAAATCTAATACTCCCTC+CGG + chr6_3:4141450-4141469 Msa0934360:intron 35.0%
AACCAAATAAATACTCCCTC+CGG - chr6_3:4141603-4141622 None:intergenic 35.0%
!! GAGGGAGTATTTATTTGGTT+TGG + chr6_3:4141603-4141622 Msa0934360:intron 35.0%
TAAAAAGAACCAATGCCCTA+AGG + chr6_3:4141713-4141732 Msa0934360:intron 35.0%
AAAAAGAACCAATGCCCTAA+GGG + chr6_3:4141714-4141733 Msa0934360:intron 35.0%
GTTGCATTACAATTACGTGT+GGG - chr6_3:4142181-4142200 None:intergenic 35.0%
AGTTGCATTACAATTACGTG+TGG - chr6_3:4142182-4142201 None:intergenic 35.0%
CACTAAGGTTATGGATGAAT+TGG - chr6_3:4142417-4142436 None:intergenic 35.0%
AGCTAACATAACATTGGGTT+AGG + chr6_3:4142543-4142562 Msa0934360:intron 35.0%
TGTGTTGTGTTTGTTCGATA+GGG - chr6_3:4142652-4142671 None:intergenic 35.0%
! GATTAATAACCGGATTTGCT+CGG + chr6_3:4142707-4142726 Msa0934360:CDS 35.0%
! ATTAATAACCGGATTTGCTC+GGG + chr6_3:4142708-4142727 Msa0934360:CDS 35.0%
! GAAGAGAGAGAATTTTATCG+TGG + chr6_3:4142811-4142830 Msa0934360:CDS 35.0%
CAATCTTTCCTTGCAGTTTA+AGG + chr6_3:4142940-4142959 Msa0934360:intron 35.0%
! TTCCTTGCAGTTTAAGGTTT+AGG + chr6_3:4142946-4142965 Msa0934360:intron 35.0%
! TCCTTGCAGTTTAAGGTTTA+GGG + chr6_3:4142947-4142966 Msa0934360:intron 35.0%
GCTACTTATTGTGGTTGATT+TGG - chr6_3:4143086-4143105 None:intergenic 35.0%
AGTGCTTGTTTCAATCACAT+AGG + chr6_3:4143149-4143168 Msa0934360:intron 35.0%
GTGCTTGTTTCAATCACATA+GGG + chr6_3:4143150-4143169 Msa0934360:intron 35.0%
ATCAAGTAGCACTAAACACA+AGG - chr6_3:4143335-4143354 None:intergenic 35.0%
TATATGTTTGGGTCTACCAA+AGG + chr6_3:4143383-4143402 Msa0934360:intron 35.0%
GCTTAATTCTTCAAGAACTC+CGG - chr6_3:4143465-4143484 None:intergenic 35.0%
TTGTCTCTTTACCCTTGTAA+GGG - chr6_3:4143604-4143623 None:intergenic 35.0%
AACGTATATCATTGCGGTAA+CGG - chr6_3:4143738-4143757 None:intergenic 35.0%
GGGATTAACGTATATCATTG+CGG - chr6_3:4143744-4143763 None:intergenic 35.0%
AATATAAGGATGGGATTTGG+AGG + chr6_3:4143777-4143796 Msa0934360:CDS 35.0%
ATACATATGGGAACAAATGG+GGG + chr6_3:4143900-4143919 Msa0934360:CDS 35.0%
! ATGTGGATTGAAAGAGATTG+CGG + chr6_3:4143935-4143954 Msa0934360:CDS 35.0%
GCCACAACTTCTATTTAGAA+TGG - chr6_3:4144224-4144243 None:intergenic 35.0%
CTAAATTCAGCGTGTACTTT+AGG - chr6_3:4144267-4144286 None:intergenic 35.0%
! TTTTGCAGCTGATTATTTCG+AGG + chr6_3:4144348-4144367 Msa0934360:intron 35.0%
GTAGTAGTGTTACGTGAATT+TGG + chr6_3:4144612-4144631 Msa0934360:intron 35.0%
TGGTTTAAGTCTCAAACACT+TGG + chr6_3:4144798-4144817 Msa0934360:intron 35.0%
TGAGATGGTACAGAATTGAT+TGG - chr6_3:4144892-4144911 None:intergenic 35.0%
CTAAACAATACCAGATGAGA+TGG - chr6_3:4144907-4144926 None:intergenic 35.0%
TGCATATCCAATTCTAACAG+GGG - chr6_3:4145430-4145449 None:intergenic 35.0%
GTGCATATCCAATTCTAACA+GGG - chr6_3:4145431-4145450 None:intergenic 35.0%
TGTGCATATCCAATTCTAAC+AGG - chr6_3:4145432-4145451 None:intergenic 35.0%
!!! TTTTTTTTGTAGGGGGTACT+TGG + chr6_3:4145773-4145792 Msa0934360:intron 35.0%
! TGGCAAATTTGAAGTCAACA+GGG + chr6_3:4145838-4145857 Msa0934360:CDS 35.0%
AGTTCAGAAACGCTTATTGA+AGG - chr6_3:4145951-4145970 None:intergenic 35.0%
AGACAACCTGGTAATAGTAT+TGG - chr6_3:4145988-4146007 None:intergenic 35.0%
CTGTACCTAAAAGTCATAGC+AGG + chr6_3:4140214-4140233 Msa0934360:five_prime_UTR 40.0%
GTTACTGTGCCTATTTCCAT+AGG + chr6_3:4140383-4140402 Msa0934360:five_prime_UTR 40.0%
AACCAAATCGATGATTGGGT+GGG - chr6_3:4140433-4140452 None:intergenic 40.0%
AAACCAAATCGATGATTGGG+TGG - chr6_3:4140434-4140453 None:intergenic 40.0%
GTGTGATGAAGCCTTGAATT+TGG - chr6_3:4140870-4140889 None:intergenic 40.0%
AAGTAGATACACTGCAACGT+TGG - chr6_3:4141208-4141227 None:intergenic 40.0%
CGTTGCAGTGTATCTACTTA+TGG + chr6_3:4141209-4141228 Msa0934360:intron 40.0%
CTCTTATAAATAGGACCGGA+GGG - chr6_3:4141468-4141487 None:intergenic 40.0%
TCTCTTATAAATAGGACCGG+AGG - chr6_3:4141469-4141488 None:intergenic 40.0%
! TCTTTTGTAAATAGGACCGG+AGG + chr6_3:4141584-4141603 Msa0934360:intron 40.0%
! CTTTTGTAAATAGGACCGGA+GGG + chr6_3:4141585-4141604 Msa0934360:intron 40.0%
!!! TTTTGGTTTCCTTAGGGCAA+TGG - chr6_3:4141654-4141673 None:intergenic 40.0%
AAATATTGCCCTTAGGGCAT+TGG - chr6_3:4141725-4141744 None:intergenic 40.0%
GACCGAGACATAATAGAAAC+AGG + chr6_3:4142048-4142067 Msa0934360:five_prime_UTR 40.0%
AATGGCATGAAGCACAATGA+TGG + chr6_3:4142075-4142094 Msa0934360:intron 40.0%
TACGTGTGGGAGATGTAAAA+TGG - chr6_3:4142168-4142187 None:intergenic 40.0%
TTGAACCCTTTATGGGCTTA+TGG - chr6_3:4142586-4142605 None:intergenic 40.0%
CTGTGTTGTGTTTGTTCGAT+AGG - chr6_3:4142653-4142672 None:intergenic 40.0%
GTGAAAATTGGGTTTACGGT+CGG - chr6_3:4142676-4142695 None:intergenic 40.0%
GCGGCTTGAATCATAATTCT+TGG - chr6_3:4142767-4142786 None:intergenic 40.0%
AAGGCTTTCGACAGCATATA+TGG - chr6_3:4143429-4143448 None:intergenic 40.0%
TCTTGAAGAATTAAGCGCTC+AGG + chr6_3:4143469-4143488 Msa0934360:CDS 40.0%
AACGGTAACAAGGGATGTAA+CGG + chr6_3:4143515-4143534 Msa0934360:CDS 40.0%
! TAACGGAGGTTTTCCTCAAA+AGG + chr6_3:4143532-4143551 Msa0934360:CDS 40.0%
CTTGTCTCTTTACCCTTGTA+AGG - chr6_3:4143605-4143624 None:intergenic 40.0%
! AGATGTCGTCTCTCTAAAAG+AGG + chr6_3:4143623-4143642 Msa0934360:CDS 40.0%
! GATGTCGTCTCTCTAAAAGA+GGG + chr6_3:4143624-4143643 Msa0934360:CDS 40.0%
GGGAAGAGAGTTAAAATCAC+TGG + chr6_3:4143644-4143663 Msa0934360:CDS 40.0%
ACTGGTCATGTAAAAGTTCC+TGG + chr6_3:4143662-4143681 Msa0934360:CDS 40.0%
CATGTAAAAGTTCCTGGTCA+TGG + chr6_3:4143668-4143687 Msa0934360:CDS 40.0%
AAAGTTCCTGGTCATGGAAA+CGG + chr6_3:4143674-4143693 Msa0934360:CDS 40.0%
ACGTATATCATTGCGGTAAC+GGG - chr6_3:4143737-4143756 None:intergenic 40.0%
CGAACTCGAACAATTGTTGA+TGG + chr6_3:4143809-4143828 Msa0934360:CDS 40.0%
! AGAGATTGCGGATTACCATA+TGG + chr6_3:4143947-4143966 Msa0934360:CDS 40.0%
! ATTCAGCGTGTACTTTAGGA+GGG - chr6_3:4144263-4144282 None:intergenic 40.0%
AATTCAGCGTGTACTTTAGG+AGG - chr6_3:4144264-4144283 None:intergenic 40.0%
GCTGATTATTTCGAGGTTTG+TGG + chr6_3:4144355-4144374 Msa0934360:intron 40.0%
ACAGTGTGTGTACGTATGTT+TGG + chr6_3:4144655-4144674 Msa0934360:intron 40.0%
TCAAGCAATGCATTCACTAG+AGG - chr6_3:4144718-4144737 None:intergenic 40.0%
!! CTCAAACACTTGGTTTTTCC+AGG + chr6_3:4144808-4144827 Msa0934360:intron 40.0%
CAATTCTGTACCATCTCATC+TGG + chr6_3:4144894-4144913 Msa0934360:CDS 40.0%
TATTTACAGGTGGGACCAAA+AGG + chr6_3:4145151-4145170 Msa0934360:intron 40.0%
! TCAGTAGCAACTTCACCTTT+TGG - chr6_3:4145169-4145188 None:intergenic 40.0%
ATCATCAGACAATTGTGGAG+TGG - chr6_3:4145227-4145246 None:intergenic 40.0%
ATTGCTGTCTCTGCATATGA+CGG - chr6_3:4145265-4145284 None:intergenic 40.0%
AAAGCTTCCCCTGTTAGAAT+TGG + chr6_3:4145420-4145439 Msa0934360:intron 40.0%
AAATTTGCCAGCACGATGAT+CGG - chr6_3:4145828-4145847 None:intergenic 40.0%
! CTGGCAAATTTGAAGTCAAC+AGG + chr6_3:4145837-4145856 Msa0934360:CDS 40.0%
GACAACTAATAGGCTCAACT+AGG - chr6_3:4145929-4145948 None:intergenic 40.0%
ACTCAGATCTAAGAGAGGAG+CGG - chr6_3:4140261-4140280 None:intergenic 45.0%
CATCTTCTCAATCAACGTGC+AGG + chr6_3:4140336-4140355 Msa0934360:intron 45.0%
ACTGTGCCTATTTCCATAGG+AGG + chr6_3:4140386-4140405 Msa0934360:five_prime_UTR 45.0%
CTGTGCCTATTTCCATAGGA+GGG + chr6_3:4140387-4140406 Msa0934360:five_prime_UTR 45.0%
TGTGCCTATTTCCATAGGAG+GGG + chr6_3:4140388-4140407 Msa0934360:five_prime_UTR 45.0%
ACAACCCCTCCTATGGAAAT+AGG - chr6_3:4140395-4140414 None:intergenic 45.0%
! ATCCCACCCAATCATCGATT+TGG + chr6_3:4140428-4140447 Msa0934360:five_prime_UTR 45.0%
AAATAAATACCTGGGTCGGG+TGG - chr6_3:4140527-4140546 None:intergenic 45.0%
TAGTACTACATACCTGGGTC+GGG - chr6_3:4141391-4141410 None:intergenic 45.0%
CTAGTACTACATACCTGGGT+CGG - chr6_3:4141392-4141411 None:intergenic 45.0%
!! GACCGGAGGGAGTATTTATT+TGG + chr6_3:4141598-4141617 Msa0934360:intron 45.0%
TCTTGCTAACCATTGCCCTA+AGG + chr6_3:4141642-4141661 Msa0934360:intron 45.0%
CGCTGTTGTGTGATTTGACA+TGG + chr6_3:4142390-4142409 Msa0934360:intron 45.0%
TGTGTGCCATAAGCCCATAA+AGG + chr6_3:4142577-4142596 Msa0934360:intron 45.0%
GTGTGCCATAAGCCCATAAA+GGG + chr6_3:4142578-4142597 Msa0934360:intron 45.0%
TTATCGTGGTCGCATTGTTC+AGG + chr6_3:4142825-4142844 Msa0934360:CDS 45.0%
TATCGTGGTCGCATTGTTCA+GGG + chr6_3:4142826-4142845 Msa0934360:CDS 45.0%
TCGCTCCGTTACATATCCTA+GGG + chr6_3:4142891-4142910 Msa0934360:CDS 45.0%
GGCAACCCTAGGATATGTAA+CGG - chr6_3:4142899-4142918 None:intergenic 45.0%
TTACTCACCACATTCGCCTT+GGG - chr6_3:4142920-4142939 None:intergenic 45.0%
GCCCTAAACCTTAAACTGCA+AGG - chr6_3:4142951-4142970 None:intergenic 45.0%
TCAATCACATAGGGCCTGTT+TGG + chr6_3:4143159-4143178 Msa0934360:intron 45.0%
GACAGCATATATGGAAGCCA+GGG - chr6_3:4143420-4143439 None:intergenic 45.0%
! AGCCTTATCCACATCAAGAC+CGG + chr6_3:4143443-4143462 Msa0934360:CDS 45.0%
GAAATCGTGTCTTGTGACAG+AGG + chr6_3:4143491-4143510 Msa0934360:CDS 45.0%
GTGTCTTGTGACAGAGGTAA+CGG + chr6_3:4143497-4143516 Msa0934360:CDS 45.0%
! TGACAGAGGTAACGGTAACA+AGG + chr6_3:4143505-4143524 Msa0934360:CDS 45.0%
! GACAGAGGTAACGGTAACAA+GGG + chr6_3:4143506-4143525 Msa0934360:CDS 45.0%
GTGACGAGAGTCATTTGCTT+CGG + chr6_3:4143696-4143715 Msa0934360:CDS 45.0%
TGACGAGAGTCATTTGCTTC+GGG + chr6_3:4143697-4143716 Msa0934360:CDS 45.0%
TAAGGATGGGATTTGGAGGA+AGG + chr6_3:4143781-4143800 Msa0934360:CDS 45.0%
ATATGGGAACAAATGGGGGA+TGG + chr6_3:4143904-4143923 Msa0934360:CDS 45.0%
TATGGGAACAAATGGGGGAT+GGG + chr6_3:4143905-4143924 Msa0934360:CDS 45.0%
CATCGAGAAGGATTTCGCAA+CGG - chr6_3:4143973-4143992 None:intergenic 45.0%
!! CAGGATAATGAGCATCGAGA+AGG - chr6_3:4143985-4144004 None:intergenic 45.0%
TGCTCATTATCCTGTGCTAG+AGG + chr6_3:4143991-4144010 Msa0934360:CDS 45.0%
AAGAAAGCTACCTCTAGCAC+AGG - chr6_3:4144004-4144023 None:intergenic 45.0%
TGGACACTGAACAGTTTCAG+TGG + chr6_3:4144375-4144394 Msa0934360:CDS 45.0%
CACGTGCTAATATCTATCGC+TGG + chr6_3:4144688-4144707 Msa0934360:intron 45.0%
CGCTTTCCTATTCTCCAAGA+GGG + chr6_3:4144831-4144850 Msa0934360:CDS 45.0%
CTATTCTCCAAGAGGGAAGA+GGG + chr6_3:4144838-4144857 Msa0934360:CDS 45.0%
GTAAGATTGCAATGGGAGAG+TGG - chr6_3:4145082-4145101 None:intergenic 45.0%
AGAAACAATGGGTCTTCCCT+TGG + chr6_3:4145612-4145631 Msa0934360:intron 45.0%
! TGCGTATAGCTTGCCAGAAA+TGG + chr6_3:4145677-4145696 Msa0934360:intron 45.0%
CAGGGTAAGGAATGGAGAAA+GGG - chr6_3:4145745-4145764 None:intergenic 45.0%
ACAGGGTAAGGAATGGAGAA+AGG - chr6_3:4145746-4145765 None:intergenic 45.0%
!!! TTTTTGTAGGGGGTACTTGG+AGG + chr6_3:4145776-4145795 Msa0934360:intron 45.0%
ACAATTACCGATCATCGTGC+TGG + chr6_3:4145818-4145837 Msa0934360:CDS 45.0%
!! AAAAATAAAATAAAAAATCA+AGG - chr6_3:4141968-4141987 None:intergenic 5.0%
!! TTATATTTATAAAATTCTTT+GGG - chr6_3:4143764-4143783 None:intergenic 5.0%
CGTGCAGGTGCATCTACTTA+TGG + chr6_3:4140351-4140370 Msa0934360:intron 50.0%
CAGATTGACAACCCCTCCTA+TGG - chr6_3:4140402-4140421 None:intergenic 50.0%
ATCGTGGTCGCATTGTTCAG+GGG + chr6_3:4142827-4142846 Msa0934360:CDS 50.0%
! GATATGTAACGGAGCGAGCA+TGG - chr6_3:4142888-4142907 None:intergenic 50.0%
CTCGCTCCGTTACATATCCT+AGG + chr6_3:4142890-4142909 Msa0934360:CDS 50.0%
ACATATCCTAGGGTTGCCCA+AGG + chr6_3:4142901-4142920 Msa0934360:CDS 50.0%
GTTACTCACCACATTCGCCT+TGG - chr6_3:4142921-4142940 None:intergenic 50.0%
CAGGGCATAGCAACATCCTT+TGG - chr6_3:4143402-4143421 None:intergenic 50.0%
CAAAGGATGTTGCTATGCCC+TGG + chr6_3:4143400-4143419 Msa0934360:intron 50.0%
CGACAGCATATATGGAAGCC+AGG - chr6_3:4143421-4143440 None:intergenic 50.0%
CTCCGGTCTTGATGTGGATA+AGG - chr6_3:4143448-4143467 None:intergenic 50.0%
CAAGAACTCCGGTCTTGATG+TGG - chr6_3:4143454-4143473 None:intergenic 50.0%
GGTAACAAGGGATGTAACGG+AGG + chr6_3:4143518-4143537 Msa0934360:CDS 50.0%
AGGATTTCGCAACGGCCATA+TGG - chr6_3:4143965-4143984 None:intergenic 50.0%
!! TCATTTGCAGGGCACTGAAG+AGG + chr6_3:4144115-4144134 Msa0934360:intron 50.0%
!! TTGGAGAATAGGAAAGCGCC+TGG - chr6_3:4144829-4144848 None:intergenic 50.0%
GCGCTTTCCTATTCTCCAAG+AGG + chr6_3:4144830-4144849 Msa0934360:CDS 50.0%
CCTCTTCCCTCTTGGAGAAT+AGG - chr6_3:4144840-4144859 None:intergenic 50.0%
CCTATTCTCCAAGAGGGAAG+AGG + chr6_3:4144837-4144856 Msa0934360:CDS 50.0%
ATCTTTGCCCTCTTCCCTCT+TGG - chr6_3:4144848-4144867 None:intergenic 50.0%
GAAGTTGCTACTGAGCAACC+TGG + chr6_3:4145175-4145194 Msa0934360:CDS 50.0%
! TTTTATACGCCACCCGACCC+AGG + chr6_3:4140515-4140534 Msa0934360:five_prime_UTR 55.0%
! TTTTATACGCCACCCGACCC+AGG + chr6_3:4140515-4140534 Msa0934360:five_prime_UTR 55.0%
TACTACATACCTGGGTCGGG+TGG - chr6_3:4141388-4141407 None:intergenic 55.0%
! AACCGGATTTGCTCGGGTCT+TGG + chr6_3:4142714-4142733 Msa0934360:CDS 55.0%
! ACCGGATTTGCTCGGGTCTT+GGG + chr6_3:4142715-4142734 Msa0934360:CDS 55.0%
ACCCAAGACCCGAGCAAATC+CGG - chr6_3:4142719-4142738 None:intergenic 55.0%
TCGTGGTCGCATTGTTCAGG+GGG + chr6_3:4142828-4142847 Msa0934360:CDS 55.0%
TCGTCACCGTTTCCATGACC+AGG - chr6_3:4143683-4143702 None:intergenic 55.0%
!! GGGGGATGGGAGGTTTTATG+TGG + chr6_3:4143918-4143937 Msa0934360:CDS 55.0%
GTGGCAACAGCAGATGCCAT+GGG - chr6_3:4145208-4145227 None:intergenic 55.0%
AGTGGCAACAGCAGATGCCA+TGG - chr6_3:4145209-4145228 None:intergenic 55.0%
AGAAATGGCCACCGTTGCTG+CGG + chr6_3:4145692-4145711 Msa0934360:intron 55.0%
!! TTGTAGGGGGTACTTGGAGG+TGG + chr6_3:4145779-4145798 Msa0934360:intron 55.0%
! GGATTTGCTCGGGTCTTGGG+TGG + chr6_3:4142718-4142737 Msa0934360:CDS 60.0%
! CGTCTCTGACTTGCCAGACG+AGG + chr6_3:4142852-4142871 Msa0934360:CDS 60.0%
ACTTGCCAGACGAGGTCGAC+TGG + chr6_3:4142860-4142879 Msa0934360:CDS 60.0%
CATTCGCCTTGGGCAACCCT+AGG - chr6_3:4142910-4142929 None:intergenic 60.0%
AGGGTTGCCCAAGGCGAATG+TGG + chr6_3:4142910-4142929 Msa0934360:CDS 60.0%
GGGAACAAATGGGGGATGGG+AGG + chr6_3:4143908-4143927 Msa0934360:CDS 60.0%
GCAACCTGGCAAGAGTCCCA+TGG + chr6_3:4145189-4145208 Msa0934360:CDS 60.0%
GATGCCATGGGACTCTTGCC+AGG - chr6_3:4145196-4145215 None:intergenic 60.0%
GCAGCAACGGTGGCCATTTC+TGG - chr6_3:4145693-4145712 None:intergenic 60.0%
! TGGTGCCAGTCGACCTCGTC+TGG - chr6_3:4142868-4142887 None:intergenic 65.0%
!! ACTGGTGGTGGCCGCAGCAA+CGG - chr6_3:4145706-4145725 None:intergenic 65.0%
!! GGGGGTACTTGGAGGTGGTC+AGG + chr6_3:4145784-4145803 Msa0934360:intron 65.0%
! GGTGGTGGCCGCAGCAACGG+TGG - chr6_3:4145703-4145722 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr6_3 gene 4140139 4146162 4140139 ID=Msa0934360;Name=Msa0934360
chr6_3 mRNA 4140139 4146162 4140139 ID=Msa0934360-mRNA-1;Parent=Msa0934360;Name=Msa0934360-mRNA-1;_AED=0.24;_eAED=0.24;_QI=532|1|1|1|0.63|0.58|12|291|435
chr6_3 exon 4140139 4140278 4140139 ID=Msa0934360-mRNA-1:exon:1253;Parent=Msa0934360-mRNA-1
chr6_3 exon 4140358 4140536 4140358 ID=Msa0934360-mRNA-1:exon:1254;Parent=Msa0934360-mRNA-1
chr6_3 exon 4141264 4141397 4141264 ID=Msa0934360-mRNA-1:exon:1255;Parent=Msa0934360-mRNA-1
chr6_3 exon 4141993 4142069 4141993 ID=Msa0934360-mRNA-1:exon:1256;Parent=Msa0934360-mRNA-1
chr6_3 exon 4142698 4142931 4142698 ID=Msa0934360-mRNA-1:exon:1257;Parent=Msa0934360-mRNA-1
chr6_3 exon 4143405 4144012 4143405 ID=Msa0934360-mRNA-1:exon:1258;Parent=Msa0934360-mRNA-1
chr6_3 exon 4144125 4144205 4144125 ID=Msa0934360-mRNA-1:exon:1259;Parent=Msa0934360-mRNA-1
chr6_3 exon 4144356 4144396 4144356 ID=Msa0934360-mRNA-1:exon:1260;Parent=Msa0934360-mRNA-1
chr6_3 exon 4144509 4144531 4144509 ID=Msa0934360-mRNA-1:exon:1261;Parent=Msa0934360-mRNA-1
chr6_3 exon 4144830 4144915 4144830 ID=Msa0934360-mRNA-1:exon:1262;Parent=Msa0934360-mRNA-1
chr6_3 exon 4145160 4145309 4145160 ID=Msa0934360-mRNA-1:exon:1263;Parent=Msa0934360-mRNA-1
chr6_3 exon 4145785 4146162 4145785 ID=Msa0934360-mRNA-1:exon:1264;Parent=Msa0934360-mRNA-1
chr6_3 five_prime_UTR 4140139 4140278 4140139 ID=Msa0934360-mRNA-1:five_prime_utr;Parent=Msa0934360-mRNA-1
chr6_3 five_prime_UTR 4140358 4140536 4140358 ID=Msa0934360-mRNA-1:five_prime_utr;Parent=Msa0934360-mRNA-1
chr6_3 five_prime_UTR 4141264 4141397 4141264 ID=Msa0934360-mRNA-1:five_prime_utr;Parent=Msa0934360-mRNA-1
chr6_3 five_prime_UTR 4141993 4142069 4141993 ID=Msa0934360-mRNA-1:five_prime_utr;Parent=Msa0934360-mRNA-1
chr6_3 five_prime_UTR 4142698 4142699 4142698 ID=Msa0934360-mRNA-1:five_prime_utr;Parent=Msa0934360-mRNA-1
chr6_3 CDS 4142700 4142931 4142700 ID=Msa0934360-mRNA-1:cds;Parent=Msa0934360-mRNA-1
chr6_3 CDS 4143405 4144012 4143405 ID=Msa0934360-mRNA-1:cds;Parent=Msa0934360-mRNA-1
chr6_3 CDS 4144125 4144205 4144125 ID=Msa0934360-mRNA-1:cds;Parent=Msa0934360-mRNA-1
chr6_3 CDS 4144356 4144396 4144356 ID=Msa0934360-mRNA-1:cds;Parent=Msa0934360-mRNA-1
chr6_3 CDS 4144509 4144531 4144509 ID=Msa0934360-mRNA-1:cds;Parent=Msa0934360-mRNA-1
chr6_3 CDS 4144830 4144915 4144830 ID=Msa0934360-mRNA-1:cds;Parent=Msa0934360-mRNA-1
chr6_3 CDS 4145160 4145309 4145160 ID=Msa0934360-mRNA-1:cds;Parent=Msa0934360-mRNA-1
chr6_3 CDS 4145785 4145871 4145785 ID=Msa0934360-mRNA-1:cds;Parent=Msa0934360-mRNA-1
chr6_3 three_prime_UTR 4145872 4146162 4145872 ID=Msa0934360-mRNA-1:three_prime_utr;Parent=Msa0934360-mRNA-1
Gene Sequence

>Msa0934360

ATGAATCGATTAATAACCGGATTTGCTCGGGTCTTGGGTGGATTTTCTCTTATTCATTCTTCTTCCAAGAATTATGATTCAAGCCGCAAATTTTTGTTTAAATCAGACGAAGAAGAGAGAGAATTTTATCGTGGTCGCATTGTTCAGGGGGACGTCTCTGACTTGCCAGACGAGGTCGACTGGCACCATGCTCGCTCCGTTACATATCCTAGGGTTGCCCAAGGCGAATGTGGATGTTGCTATGCCCTGGCTTCCATATATGCTGTCGAAAGCCTTATCCACATCAAGACCGGAGTTCTTGAAGAATTAAGCGCTCAGGAAATCGTGTCTTGTGACAGAGGTAACGGTAACAAGGGATGTAACGGAGGTTTTCCTCAAAAGGTATTTGAATACATAAAGAGGAACGGGATTTCTCTTGAAAAAGATTTCCCTTACAAGGGTAAAGAGACAAGATGTCGTCTCTCTAAAAGAGGGAAGAGAGTTAAAATCACTGGTCATGTAAAAGTTCCTGGTCATGGAAACGGTGACGAGAGTCATTTGCTTCGGGCTGTTGCAAAACAGCCCGTTACCGCAATGATATACGTTAATCCCAAAGAATTTTATAAATATAAGGATGGGATTTGGAGGAAGGAATATCGAACTCGAACAATTGTTGATGGTGCATTGCATAATGTTTGCATTGTTGGATACCATACTATTGACACAATTAAGTTTTGGAAAATTAAGAATACATATGGGAACAAATGGGGGATGGGAGGTTTTATGTGGATTGAAAGAGATTGCGGATTACCATATGGCCGTTGCGAAATCCTTCTCGATGCTCATTATCCTGTGCTAGAGGGCACTGAAGAGGAAATTAATGAACTAGTAGGTAACACAAAAGCAGAGCAGCCTAAGAGCTTTTTGAATAGATTTATACCGCTGATTATTTCGAGGTTTGTGGACACTGAACAGTTTCAGTGGTTTAATGATTTGAAAGAAATCGGCGCTTTCCTATTCTCCAAGAGGGAAGAGGGCAAAGATGACACTACTAGTTGCAGTCAACCAATCAATTCTGTACCATCTCATCTGGTGGGACCAAAAGGTGAAGTTGCTACTGAGCAACCTGGCAAGAGTCCCATGGCATCTGCTGTTGCCACTCCACAATTGTCTGATGATGATATTGGCATATCACCGTCATATGCAGAGACAGCAATCAATAAGAATAGAAAGATGGCAGACGGGGTACTTGGAGGTGGTCAGGATACATCAGTTACAATTACCGATCATCGTGCTGGCAAATTTGAAGTCAACAGGGAAGATTGCTAG
Protein sequence

>Msa0934360

MNRLITGFARVLGGFSLIHSSSKNYDSSRKFLFKSDEEEREFYRGRIVQGDVSDLPDEVDWHHARSVTYPRVAQGECGCCYALASIYAVESLIHIKTGVLEELSAQEIVSCDRGNGNKGCNGGFPQKVFEYIKRNGISLEKDFPYKGKETRCRLSKRGKRVKITGHVKVPGHGNGDESHLLRAVAKQPVTAMIYVNPKEFYKYKDGIWRKEYRTRTIVDGALHNVCIVGYHTIDTIKFWKIKNTYGNKWGMGGFMWIERDCGLPYGRCEILLDAHYPVLEGTEEEINELVGNTKAEQPKSFLNRFIPLIISRFVDTEQFQWFNDLKEIGAFLFSKREEGKDDTTSCSQPINSVPSHLVGPKGEVATEQPGKSPMASAVATPQLSDDDIGISPSYAETAINKNRKMADGVLGGGQDTSVTITDHRAGKFEVNREDC*