AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0934460

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0934460 MtrunA17_Chr4g0058081 36.154 260 147 7 45 302 118 360 3.48e-45 160
Msa0934460 MtrunA17_Chr4g0041521 36.100 241 144 5 39 278 108 339 6.62e-44 156
Msa0934460 MtrunA17_Chr4g0041481 36.100 241 144 5 39 278 108 339 1.01e-43 156
Msa0934460 MtrunA17_Chr4g0053311 38.696 230 128 8 55 281 125 344 2.04e-41 150
Msa0934460 MtrunA17_Chr1g0208261 38.462 234 131 8 51 281 175 398 2.47e-41 153
Msa0934460 MtrunA17_Chr3g0116551 36.709 237 137 7 45 278 118 344 2.40e-40 147
Msa0934460 MtrunA17_Chr4g0041471 36.364 231 134 7 51 278 121 341 3.85e-40 146
Msa0934460 MtrunA17_Chr4g0060251 35.931 231 136 7 51 278 123 344 1.11e-39 145
Msa0934460 MtrunA17_Chr4g0024411 35.498 231 137 7 51 278 121 342 1.11e-39 145
Msa0934460 MtrunA17_Chr5g0405751 35.498 231 137 7 51 278 122 343 2.34e-39 144
Msa0934460 MtrunA17_Chr2g0319991 36.638 232 135 7 51 279 122 344 3.29e-39 144
Msa0934460 MtrunA17_Chr4g0040881 35.371 229 136 7 53 278 125 344 1.06e-38 142
Msa0934460 MtrunA17_Chr3g0134231 37.391 230 131 8 55 281 145 364 1.26e-38 145
Msa0934460 MtrunA17_Chr2g0325121 37.004 227 132 5 54 278 119 336 1.56e-38 142
Msa0934460 MtrunA17_Chr3g0142071 36.626 243 137 8 38 278 128 355 1.77e-38 144
Msa0934460 MtrunA17_Chr4g0041061 35.371 229 136 7 53 278 125 344 1.89e-38 142
Msa0934460 MtrunA17_Chr2g0311381 40.179 224 113 7 49 263 130 341 2.56e-38 142
Msa0934460 MtrunA17_Chr4g0040851 35.371 229 135 6 54 279 142 360 2.65e-38 142
Msa0934460 MtrunA17_Chr4g0041081 34.498 229 138 7 53 278 125 344 9.57e-38 140
Msa0934460 MtrunA17_Chr3g0144281 34.752 282 163 12 2 278 82 347 1.49e-37 139
Msa0934460 MtrunA17_Chr2g0315491 34.348 230 141 6 51 278 119 340 1.73e-37 139
Msa0934460 MtrunA17_Chr7g0248391 36.170 235 137 7 51 283 119 342 2.35e-37 139
Msa0934460 MtrunA17_Chr2g0283671 38.596 228 126 7 54 279 13 228 5.79e-36 132
Msa0934460 MtrunA17_Chr2g0283741 35.268 224 137 6 56 278 142 358 1.33e-35 135
Msa0934460 MtrunA17_Chr2g0311471 39.648 227 128 5 55 280 130 348 5.66e-35 132
Msa0934460 MtrunA17_Chr1g0153011 37.391 230 131 8 55 281 126 345 5.93e-35 135
Msa0934460 MtrunA17_Chr7g0248811 36.245 229 133 7 51 277 117 334 1.35e-34 131
Msa0934460 MtrunA17_Chr2g0283901 36.245 229 135 6 54 280 138 357 3.19e-32 127
Msa0934460 MtrunA17_Chr2g0311391 35.498 231 128 9 55 278 155 371 2.74e-31 123
Msa0934460 MtrunA17_Chr8g0379151 35.043 234 132 8 51 278 153 372 1.16e-29 119
Msa0934460 MtrunA17_Chr1g0156161 33.992 253 145 11 35 279 27 265 2.53e-28 112
Msa0934460 MtrunA17_Chr0c27g0493921 33.480 227 139 7 55 279 133 349 3.64e-28 114
Msa0934460 MtrunA17_Chr4g0070441 34.951 206 126 6 55 258 133 332 3.02e-27 111
Msa0934460 MtrunA17_Chr1g0155781 30.045 223 132 7 52 259 132 345 1.03e-22 99.0
Msa0934460 MtrunA17_Chr1g0199131 28.185 259 145 9 35 263 108 355 1.04e-21 96.3
Msa0934460 MtrunA17_Chr4g0035551 31.081 222 127 9 54 259 130 341 1.57e-19 89.7
Msa0934460 MtrunA17_Chr2g0283751 31.013 158 101 4 47 203 135 285 2.03e-18 85.5
Msa0934460 MtrunA17_Chr7g0248421 33.548 155 89 6 80 232 57 199 8.69e-16 75.9
Msa0934460 MtrunA17_Chr1g0156771 34.127 126 70 4 36 153 34 154 7.56e-14 69.3
Msa0934460 MtrunA17_Chr7g0248371 39.048 105 55 4 176 278 34 131 9.31e-13 65.9
Msa0934460 MtrunA17_Chr2g0283661 34.454 119 68 4 162 279 163 272 1.03e-12 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0934460 AT3G48340.1 40.870 230 124 6 51 278 124 343 2.98e-47 166
Msa0934460 AT3G43960.1 41.200 250 125 11 35 278 113 346 5.14e-43 155
Msa0934460 AT5G50260.1 36.140 285 148 11 18 278 68 342 5.23e-42 152
Msa0934460 AT3G19400.1 37.860 243 132 8 39 277 120 347 8.00e-42 152
Msa0934460 AT3G49340.1 37.826 230 129 7 51 278 123 340 2.76e-41 150
Msa0934460 AT3G48350.1 38.655 238 132 8 45 278 116 343 5.47e-41 149
Msa0934460 AT1G06260.1 35.798 257 153 5 24 278 96 342 2.58e-40 147
Msa0934460 AT4G11310.1 37.445 227 128 6 55 278 137 352 3.91e-40 147
Msa0934460 AT5G45890.1 38.158 228 127 8 55 279 130 346 5.86e-40 146
Msa0934460 AT4G11320.2 36.555 238 135 7 44 278 135 359 9.20e-40 146
Msa0934460 AT4G11320.1 36.555 238 135 7 44 278 135 359 9.20e-40 146
Msa0934460 AT5G43060.1 36.466 266 145 10 30 281 101 356 9.98e-40 148
Msa0934460 AT4G35350.1 38.696 230 129 8 51 278 133 352 4.36e-39 144
Msa0934460 AT1G20850.1 36.885 244 140 8 37 278 122 353 2.30e-38 142
Msa0934460 AT1G29090.1 38.362 232 129 8 51 278 133 354 2.63e-38 142
Msa0934460 AT1G09850.1 37.553 237 135 8 44 278 108 333 4.53e-38 143
Msa0934460 AT4G36880.1 35.965 228 133 7 54 278 144 361 4.56e-38 142
Msa0934460 AT2G27420.1 37.021 235 132 7 50 278 123 347 9.15e-38 140
Msa0934460 AT2G34080.1 36.797 231 132 8 51 278 125 344 3.36e-37 139
Msa0934460 AT1G29080.1 39.565 230 126 8 52 278 126 345 4.08e-37 139
Msa0934460 AT1G47128.1 36.179 246 143 8 38 281 122 355 1.47e-36 140
Msa0934460 AT3G19390.1 36.123 227 132 7 55 278 129 345 5.16e-35 135
Msa0934460 AT4G23520.1 35.526 228 132 8 55 278 133 349 3.01e-33 128
Msa0934460 AT1G29110.1 36.681 229 120 8 54 279 128 334 2.68e-32 125
Msa0934460 AT5G60360.1 33.186 226 141 5 55 279 141 357 3.32e-30 120
Msa0934460 AT5G60360.2 32.743 226 141 5 55 279 141 356 1.22e-29 119
Msa0934460 AT3G45310.1 31.579 228 146 5 53 279 139 357 2.04e-28 115
Msa0934460 AT3G45310.2 32.018 228 144 5 53 279 139 356 2.55e-28 115
Msa0934460 AT5G60360.3 34.146 205 129 4 55 258 141 340 2.97e-28 115
Msa0934460 AT3G19400.2 41.176 170 86 7 39 204 120 279 8.10e-28 112
Msa0934460 AT4G35350.2 40.741 162 88 7 51 210 133 288 1.95e-27 111
Msa0934460 AT3G48350.2 38.922 167 94 6 45 208 116 277 3.46e-25 105
Msa0934460 AT2G21430.1 31.364 220 125 8 54 257 131 340 1.53e-20 93.2
Msa0934460 AT4G39090.1 31.364 220 125 8 54 257 134 343 4.00e-20 92.0
Msa0934460 AT3G54940.2 28.139 231 139 8 51 263 133 354 1.84e-19 89.7
Msa0934460 AT4G16190.1 30.472 233 133 10 52 268 137 356 9.15e-19 87.8
Msa0934460 AT3G54940.3 30.263 152 94 4 51 194 133 280 6.44e-15 75.1
Msa0934460 AT1G02305.1 25.373 268 160 12 29 266 79 336 3.27e-13 71.2
Msa0934460 AT1G02300.1 26.718 262 142 11 47 263 94 350 1.92e-12 68.9

Find 158 sgRNAs with CRISPR-Local

Find 372 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTACTTCATGAATTTAATT+TGG 0.087326 6_3:+4299170 Msa0934460:exon
ACCAATTATCGATTTGATTT+TGG 0.121131 6_3:+4294594 Msa0934460:five_prime_UTR
TTTGGGCATTGACAAATATT+TGG 0.161136 6_3:+4299188 Msa0934460:three_prime_UTR
ACCAAAATCAAATCGATAAT+TGG 0.189814 6_3:-4294595 None:intergenic
CTTATATTTATAAAATTCTT+TGG 0.206129 6_3:-4297062 None:intergenic
ATAATAATTATGTCTTCTTT+TGG 0.244960 6_3:+4294648 Msa0934460:five_prime_UTR
TTATCGTGGTCGCATTGTTC+AGG 0.276214 6_3:+4296125 Msa0934460:CDS
TGGAAAATTAAGAATACATA+TGG 0.280793 6_3:+4297187 Msa0934460:CDS
AACCGGATTTGCTCGGGTCT+TGG 0.285892 6_3:+4296014 Msa0934460:CDS
GTTAACGTCATCCATTAGTT+TGG 0.288918 6_3:-4293472 None:intergenic
ATCTTTGCCCTCTTCCCTCT+TGG 0.299873 6_3:-4298144 None:intergenic
ATAATAATAATGCCTTCTTT+TGG 0.302143 6_3:+4293781 Msa0934460:five_prime_UTR
CTACTTCATGAATTTAATTT+GGG 0.309550 6_3:+4299171 Msa0934460:three_prime_UTR
TTGCATAATGTTTGCATTGT+TGG 0.310030 6_3:+4297136 Msa0934460:CDS
ACAACCCCTCCTATGGAAAT+AGG 0.318008 6_3:-4293692 None:intergenic
ATCCCACCCAATCATCGATT+TGG 0.324684 6_3:+4293728 Msa0934460:five_prime_UTR
CCTCTTCCCTCTTGGAGAAT+AGG 0.329496 6_3:-4298136 None:intergenic
CTTGTCTCTTTACCCTTGTA+AGG 0.329562 6_3:-4296902 None:intergenic
ACTTAATTGTGTCAATAGTA+TGG 0.330623 6_3:-4297162 None:intergenic
CTATTGACACAATTAAGTTT+TGG 0.330726 6_3:+4297167 Msa0934460:CDS
AAGGCTTTCGACAGCATATA+TGG 0.331974 6_3:-4296726 None:intergenic
GCGGCTTGAATCATAATTCT+TGG 0.333912 6_3:-4296064 None:intergenic
CTTATTGAAGGACAACTAAT+AGG 0.339921 6_3:-4299235 None:intergenic
CGTGCAGGTGCATCTACTTA+TGG 0.346884 6_3:+4293651 Msa0934460:intron
ATAAATATAAGGATGGGATT+TGG 0.349610 6_3:+4297074 Msa0934460:CDS
CTGGCAAATTTGAAGTCAAC+AGG 0.364435 6_3:+4299136 Msa0934460:CDS
TTTAATGATTTGAAAGAAAT+CGG 0.368928 6_3:+4297811 Msa0934460:CDS
AGAATACATATGGGAACAAA+TGG 0.368945 6_3:+4297197 Msa0934460:CDS
ACGTATATCATTGCGGTAAC+GGG 0.373174 6_3:-4297034 None:intergenic
TTATATTTATAAAATTCTTT+GGG 0.376669 6_3:-4297061 None:intergenic
ACCGGATTTGCTCGGGTCTT+GGG 0.377683 6_3:+4296015 Msa0934460:CDS
TTAACGTCATCCATTAGTTT+GGG 0.380065 6_3:-4293471 None:intergenic
GATTAAACCAAATCGATGAT+TGG 0.384436 6_3:-4293735 None:intergenic
ACTGGTCATGTAAAAGTTCC+TGG 0.395404 6_3:+4296962 Msa0934460:CDS
TCTATGCAACGAATTTCAAA+TGG 0.400811 6_3:+4299391 Msa0934460:three_prime_UTR
TCAGTAGCAACTTCACCTTT+TGG 0.405393 6_3:-4298465 None:intergenic
ATTTCCAACATTATTCTTTG+TGG 0.405740 6_3:+4299319 Msa0934460:three_prime_UTR
TGGTGCCAGTCGACCTCGTC+TGG 0.407923 6_3:-4296165 None:intergenic
TGACGAGAGTCATTTGCTTC+GGG 0.417023 6_3:+4296997 Msa0934460:CDS
CAATTCTGTACCATCTCATC+TGG 0.420799 6_3:+4298193 Msa0934460:CDS
GCTGATTATTTCGAGGTTTG+TGG 0.422496 6_3:+4297655 Msa0934460:intron
GACCGAGACATAATAGAAAC+AGG 0.423710 6_3:+4295348 Msa0934460:five_prime_UTR
GTGACGAGAGTCATTTGCTT+CGG 0.424226 6_3:+4296996 Msa0934460:CDS
GATTAATAACCGGATTTGCT+CGG 0.426263 6_3:+4296007 Msa0934460:CDS
CAATTGTCTGATGATGATAT+TGG 0.427395 6_3:+4298531 Msa0934460:CDS
TTGAATACATAAAGAGGAAC+GGG 0.427836 6_3:+4296858 Msa0934460:CDS
CTCCGGTCTTGATGTGGATA+AGG 0.429547 6_3:-4296745 None:intergenic
ACCCAAGACCCGAGCAAATC+CGG 0.430831 6_3:-4296016 None:intergenic
TTTCCAACATTATTCTTTGT+GGG 0.436183 6_3:+4299320 Msa0934460:three_prime_UTR
CTGAAATGTTGGCAAGAAAA+CGG 0.436250 6_3:+4293425 None:intergenic
ATTAAACCAAATCGATGATT+GGG 0.438106 6_3:-4293734 None:intergenic
CGAACTCGAACAATTGTTGA+TGG 0.444371 6_3:+4297109 Msa0934460:CDS
ATTAATAACCGGATTTGCTC+GGG 0.445363 6_3:+4296008 Msa0934460:CDS
AGTTCAGAAACGCTTATTGA+AGG 0.448338 6_3:-4299247 None:intergenic
GACGTTAACAAAGACAAAAC+TGG 0.452215 6_3:+4293486 Msa0934460:five_prime_UTR
TATCGTGGTCGCATTGTTCA+GGG 0.454378 6_3:+4296126 Msa0934460:CDS
TTACTCACCACATTCGCCTT+GGG 0.454880 6_3:-4296217 None:intergenic
GAAATGAATCGATTAATAAC+CGG 0.457995 6_3:+4295997 Msa0934460:intron
AATCAAATCGATAATTGGTT+GGG 0.459670 6_3:-4294590 None:intergenic
CAGATTGACAACCCCTCCTA+TGG 0.463837 6_3:-4293699 None:intergenic
TGAAATGTTGGCAAGAAAAC+GGG 0.464444 6_3:+4293426 None:intergenic
CATCTACTTATGGCTTATCA+TGG 0.464584 6_3:+4293661 Msa0934460:five_prime_UTR
GAATACATATGGGAACAAAT+GGG 0.467377 6_3:+4297198 Msa0934460:CDS
AGGATTTCGCAACGGCCATA+TGG 0.468478 6_3:-4297262 None:intergenic
AATAAAATAAATACCTGGGT+CGG 0.469818 6_3:-4293828 None:intergenic
AACGTATATCATTGCGGTAA+CGG 0.470232 6_3:-4297035 None:intergenic
CTGTGCCTATTTCCATAGGA+GGG 0.474234 6_3:+4293687 Msa0934460:five_prime_UTR
TATTTACAGGTGGGACCAAA+AGG 0.476441 6_3:+4298450 Msa0934460:intron
TAAGGATGGGATTTGGAGGA+AGG 0.477856 6_3:+4297081 Msa0934460:CDS
GATGCCATGGGACTCTTGCC+AGG 0.478933 6_3:-4298492 None:intergenic
AAATCAAATCGATAATTGGT+TGG 0.479330 6_3:-4294591 None:intergenic
AGACAACCTGGTAATAGTAT+TGG 0.480323 6_3:-4299284 None:intergenic
TACCTGTTTCTATTATGTCT+CGG 0.484505 6_3:-4295350 None:intergenic
GTTACTCACCACATTCGCCT+TGG 0.487038 6_3:-4296218 None:intergenic
GAGGAAATTAATGAACTAGT+AGG 0.488357 6_3:+4297434 Msa0934460:CDS
CCTATTCTCCAAGAGGGAAG+AGG 0.488545 6_3:+4298136 Msa0934460:CDS
CGACAGCATATATGGAAGCC+AGG 0.489445 6_3:-4296718 None:intergenic
ATAAAATAAATACCTGGGTC+GGG 0.491291 6_3:-4293827 None:intergenic
CTATGCAACGAATTTCAAAT+GGG 0.494425 6_3:+4299392 Msa0934460:three_prime_UTR
ACTTGCCAGACGAGGTCGAC+TGG 0.496853 6_3:+4296160 Msa0934460:CDS
AAAGTTCCTGGTCATGGAAA+CGG 0.503181 6_3:+4296974 Msa0934460:CDS
GGAAAATTAAGAATACATAT+GGG 0.503475 6_3:+4297188 Msa0934460:CDS
CATGTAAAAGTTCCTGGTCA+TGG 0.508992 6_3:+4296968 Msa0934460:CDS
TCTTGAAGAATTAAGCGCTC+AGG 0.509616 6_3:+4296769 Msa0934460:CDS
AATCCCACAAAGAATAATGT+TGG 0.509955 6_3:-4299323 None:intergenic
CTAGTACTACATACCTGGGT+CGG 0.512737 6_3:-4294689 None:intergenic
CTCGCTCCGTTACATATCCT+AGG 0.513599 6_3:+4296190 Msa0934460:CDS
GTGAATAAAATCAATTTCAC+AGG 0.514000 6_3:-4299430 None:intergenic
ACTGTGCCTATTTCCATAGG+AGG 0.515188 6_3:+4293686 Msa0934460:five_prime_UTR
AATATAAGGATGGGATTTGG+AGG 0.521520 6_3:+4297077 Msa0934460:CDS
GGGAAGAGAGTTAAAATCAC+TGG 0.524252 6_3:+4296944 Msa0934460:CDS
TGTGCCTATTTCCATAGGAG+GGG 0.527905 6_3:+4293688 Msa0934460:five_prime_UTR
CAAAGGATGTTGCTATGCCC+TGG 0.527946 6_3:+4296700 Msa0934460:intron
AAGAAAGCTACCTCTAGCAC+AGG 0.528209 6_3:-4297301 None:intergenic
ATGTGGATTGAAAGAGATTG+CGG 0.533688 6_3:+4297235 Msa0934460:CDS
CGCTTTCCTATTCTCCAAGA+GGG 0.533886 6_3:+4298130 Msa0934460:CDS
CTATTCTCCAAGAGGGAAGA+GGG 0.534610 6_3:+4298137 Msa0934460:CDS
GGATTTGCTCGGGTCTTGGG+TGG 0.537985 6_3:+4296018 Msa0934460:CDS
TGAGATGGTACAGAATTGAT+TGG 0.538514 6_3:-4298188 None:intergenic
AGAGATTGCGGATTACCATA+TGG 0.538911 6_3:+4297247 Msa0934460:CDS
TAGTACTACATACCTGGGTC+GGG 0.539168 6_3:-4294688 None:intergenic
AGCCTTATCCACATCAAGAC+CGG 0.539452 6_3:+4296743 Msa0934460:CDS
AATCAATAAGAATAGAAAGA+TGG 0.540357 6_3:+4298581 Msa0934460:CDS
TTGTCTCTTTACCCTTGTAA+GGG 0.542447 6_3:-4296901 None:intergenic
GTTACTGTGCCTATTTCCAT+AGG 0.543664 6_3:+4293683 Msa0934460:five_prime_UTR
AGATGTCGTCTCTCTAAAAG+AGG 0.544043 6_3:+4296923 Msa0934460:CDS
AAATTTGCCAGCACGATGAT+CGG 0.545669 6_3:-4299124 None:intergenic
AGGTATTTGAATACATAAAG+AGG 0.546368 6_3:+4296852 Msa0934460:CDS
TAATTTCCAATACTATTACC+AGG 0.547032 6_3:+4299278 Msa0934460:three_prime_UTR
AAACCAAATCGATGATTGGG+TGG 0.560538 6_3:-4293731 None:intergenic
CATTCGCCTTGGGCAACCCT+AGG 0.563425 6_3:-4296207 None:intergenic
CTGTACCTAAAAGTCATAGC+AGG 0.566003 6_3:+4293514 Msa0934460:five_prime_UTR
TGACAGAGGTAACGGTAACA+AGG 0.570296 6_3:+4296805 Msa0934460:CDS
CTAAACAATACCAGATGAGA+TGG 0.572125 6_3:-4298203 None:intergenic
AGTGGCAACAGCAGATGCCA+TGG 0.575266 6_3:-4298505 None:intergenic
GATATGTAACGGAGCGAGCA+TGG 0.575738 6_3:-4296185 None:intergenic
GTGGCAACAGCAGATGCCAT+GGG 0.576151 6_3:-4298504 None:intergenic
ACAATTACCGATCATCGTGC+TGG 0.579960 6_3:+4299117 Msa0934460:CDS
TCGTGGTCGCATTGTTCAGG+GGG 0.582354 6_3:+4296128 Msa0934460:CDS
GCTTAATTCTTCAAGAACTC+CGG 0.584191 6_3:-4296762 None:intergenic
TTTGAATACATAAAGAGGAA+CGG 0.584506 6_3:+4296857 Msa0934460:CDS
TCGTCACCGTTTCCATGACC+AGG 0.586625 6_3:-4296980 None:intergenic
TCATTTGCAGGGCACTGAAG+AGG 0.587334 6_3:+4297415 Msa0934460:intron
ATCGTGGTCGCATTGTTCAG+GGG 0.591913 6_3:+4296127 Msa0934460:CDS
CAAGAACTCCGGTCTTGATG+TGG 0.594900 6_3:-4296751 None:intergenic
AGGGTTGCCCAAGGCGAATG+TGG 0.595130 6_3:+4296210 Msa0934460:CDS
AATACATATGGGAACAAATG+GGG 0.598223 6_3:+4297199 Msa0934460:CDS
AACGGTAACAAGGGATGTAA+CGG 0.598475 6_3:+4296815 Msa0934460:CDS
TCGCTCCGTTACATATCCTA+GGG 0.601139 6_3:+4296191 Msa0934460:CDS
GTGTCTTGTGACAGAGGTAA+CGG 0.607196 6_3:+4296797 Msa0934460:CDS
TGGACACTGAACAGTTTCAG+TGG 0.608580 6_3:+4297675 Msa0934460:CDS
CAGGATAATGAGCATCGAGA+AGG 0.609449 6_3:-4297282 None:intergenic
ATACATATGGGAACAAATGG+GGG 0.611571 6_3:+4297200 Msa0934460:CDS
GACAGCATATATGGAAGCCA+GGG 0.611978 6_3:-4296717 None:intergenic
ATATCATCATCAGACAATTG+TGG 0.612089 6_3:-4298528 None:intergenic
TGCTCATTATCCTGTGCTAG+AGG 0.625163 6_3:+4297291 Msa0934460:CDS
TACTACATACCTGGGTCGGG+TGG 0.626200 6_3:-4294685 None:intergenic
AAATAAATACCTGGGTCGGG+TGG 0.626403 6_3:-4293824 None:intergenic
AACCAAATCGATGATTGGGT+GGG 0.626947 6_3:-4293730 None:intergenic
GCAACCTGGCAAGAGTCCCA+TGG 0.627514 6_3:+4298488 Msa0934460:CDS
GACAACTAATAGGCTCAACT+AGG 0.630668 6_3:-4299225 None:intergenic
GATGTCGTCTCTCTAAAAGA+GGG 0.630983 6_3:+4296924 Msa0934460:CDS
TATAGAAAATAAAGACAACC+TGG 0.632473 6_3:-4299296 None:intergenic
GAAATCGTGTCTTGTGACAG+AGG 0.634008 6_3:+4296791 Msa0934460:CDS
ATTGCTGTCTCTGCATATGA+CGG 0.635815 6_3:-4298561 None:intergenic
GGGATTAACGTATATCATTG+CGG 0.637029 6_3:-4297041 None:intergenic
ATCATCAGACAATTGTGGAG+TGG 0.637497 6_3:-4298523 None:intergenic
GGCAACCCTAGGATATGTAA+CGG 0.640932 6_3:-4296196 None:intergenic
CGTCTCTGACTTGCCAGACG+AGG 0.642134 6_3:+4296152 Msa0934460:CDS
TACTTACTCAGATCTAAGAG+AGG 0.648220 6_3:-4293563 None:intergenic
GAAGTTGCTACTGAGCAACC+TGG 0.650794 6_3:+4298474 Msa0934460:CDS
GCGCTTTCCTATTCTCCAAG+AGG 0.651050 6_3:+4298129 Msa0934460:CDS
ACATATCCTAGGGTTGCCCA+AGG 0.661221 6_3:+4296201 Msa0934460:CDS
ACTCAGATCTAAGAGAGGAG+CGG 0.677993 6_3:-4293558 None:intergenic
GACAGAGGTAACGGTAACAA+GGG 0.680528 6_3:+4296806 Msa0934460:CDS
TGGCAAATTTGAAGTCAACA+GGG 0.696531 6_3:+4299137 Msa0934460:CDS
CATCGAGAAGGATTTCGCAA+CGG 0.698659 6_3:-4297270 None:intergenic
GGTAACAAGGGATGTAACGG+AGG 0.721444 6_3:+4296818 Msa0934460:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATAATAAAATAAATACCT+GGG - chr6_3:4293835-4293854 None:intergenic 10.0%
!! AATATAATAAAATAAATACC+TGG - chr6_3:4293836-4293855 None:intergenic 10.0%
!! ATAAATCTAATTATTACTAT+TGG + chr6_3:4293863-4293882 Msa0934460:intron 10.0%
!! TAAATCTAATTATTACTATT+GGG + chr6_3:4293864-4293883 Msa0934460:intron 10.0%
!! ATTGAAACAAAAAAAAATAA+AGG + chr6_3:4294272-4294291 Msa0934460:intron 10.0%
!! TGTTACATAAAATTAAATTA+AGG + chr6_3:4294302-4294321 Msa0934460:intron 10.0%
!! GTTACATAAAATTAAATTAA+GGG + chr6_3:4294303-4294322 Msa0934460:intron 10.0%
!! TTTAAACATATAAATAGAAA+AGG - chr6_3:4294453-4294472 None:intergenic 10.0%
!! CATTAAATAATTTATGTATT+TGG - chr6_3:4294846-4294865 None:intergenic 10.0%
!! TTGAAAATCAATAATATTAT+GGG - chr6_3:4295055-4295074 None:intergenic 10.0%
!! TTTGAAAATCAATAATATTA+TGG - chr6_3:4295056-4295075 None:intergenic 10.0%
!!! ATTTATTTTGACAAATAAAA+AGG + chr6_3:4295779-4295798 Msa0934460:intron 10.0%
!! CTTATATTTATAAAATTCTT+TGG - chr6_3:4297065-4297084 None:intergenic 10.0%
!!! CAAAGAATTTTATAAATATA+AGG + chr6_3:4297063-4297082 Msa0934460:CDS 10.0%
!!! AATTTTATAAATATAAGGAT+GGG + chr6_3:4297068-4297087 Msa0934460:CDS 10.0%
!!! CACTTTTTTTTTTTATTAAA+TGG + chr6_3:4297707-4297726 Msa0934460:intron 10.0%
!! TAGATATATTAATGATATAT+TGG + chr6_3:4298223-4298242 Msa0934460:intron 10.0%
!! ACAAAAAAAAAAAAAAAACA+GGG - chr6_3:4299062-4299081 None:intergenic 10.0%
!! TACAAAAAAAAAAAAAAAAC+AGG - chr6_3:4299063-4299082 None:intergenic 10.0%
!!! TGTTTTTTTTTTTTTTTTGT+AGG + chr6_3:4299062-4299081 Msa0934460:intron 10.0%
!!! GTTTTTTTTTTTTTTTTGTA+GGG + chr6_3:4299063-4299082 Msa0934460:intron 10.0%
!!! TTTTTTTTTTTTTTTTGTAG+GGG + chr6_3:4299064-4299083 Msa0934460:intron 10.0%
!! ATATAATTAAACACGTAAAT+AGG - chr6_3:4293605-4293624 None:intergenic 15.0%
!!! ATAATAATTATGTCTTCTTT+TGG + chr6_3:4294648-4294667 Msa0934460:five_prime_UTR 15.0%
!!! TAATAATTATGTCTTCTTTT+GGG + chr6_3:4294649-4294668 Msa0934460:five_prime_UTR 15.0%
!!! ATTAATTGTCTTTTGTAAAT+AGG + chr6_3:4294876-4294895 Msa0934460:intron 15.0%
!!! AATTTTACAAAATCAATTCA+TGG - chr6_3:4295527-4295546 None:intergenic 15.0%
!! CAAAATATATATAATCACTA+AGG - chr6_3:4295732-4295751 None:intergenic 15.0%
!! TACATCATTGAAATAAAAAA+GGG - chr6_3:4296310-4296329 None:intergenic 15.0%
!! ATACATCATTGAAATAAAAA+AGG - chr6_3:4296311-4296330 None:intergenic 15.0%
!!! ATTTGTTGTTATATATGTTT+GGG + chr6_3:4296672-4296691 Msa0934460:intron 15.0%
!!! GAATTTTATAAATATAAGGA+TGG + chr6_3:4297067-4297086 Msa0934460:CDS 15.0%
!! AATAAATGATAAATAGTTGT+GGG - chr6_3:4297360-4297379 None:intergenic 15.0%
!! AAATAAATGATAAATAGTTG+TGG - chr6_3:4297361-4297380 None:intergenic 15.0%
!! TTTAATGATTTGAAAGAAAT+CGG + chr6_3:4297811-4297830 Msa0934460:CDS 15.0%
!!! AAAAAAACATTTGATTTCAA+CGG - chr6_3:4297853-4297872 None:intergenic 15.0%
!!! TTTTTAATTTAGTTATGTAG+AGG - chr6_3:4298333-4298352 None:intergenic 15.0%
!!! TTTTTTTTTTTTTTTGTAGG+GGG + chr6_3:4299065-4299084 Msa0934460:intron 15.0%
!!! TTTTTTAAAACCCAAACTAA+TGG + chr6_3:4293461-4293480 Msa0934460:five_prime_UTR 20.0%
!!! ATAATAATAATGCCTTCTTT+TGG + chr6_3:4293781-4293800 Msa0934460:five_prime_UTR 20.0%
!! ATTAAAAACAATCCAAAAGA+AGG - chr6_3:4293796-4293815 None:intergenic 20.0%
!!! TTTTATTGCAAATAAAGTCT+TGG + chr6_3:4294112-4294131 Msa0934460:intron 20.0%
!!! CAATGTAAAACTACTATTTT+TGG - chr6_3:4294971-4294990 None:intergenic 20.0%
!!! CAAAAATAGTAGTTTTACAT+TGG + chr6_3:4294969-4294988 Msa0934460:intron 20.0%
!!! TAGTTTTAAGATCATTTGAT+TGG - chr6_3:4295321-4295340 None:intergenic 20.0%
!! GACTCTAATTAAAAAAACAT+TGG + chr6_3:4295655-4295674 Msa0934460:intron 20.0%
!! ATATATAATCACTAAGGTTA+TGG - chr6_3:4295726-4295745 None:intergenic 20.0%
!!! GTAAATTTTTAACTAAAGTG+AGG - chr6_3:4295811-4295830 None:intergenic 20.0%
!! CTGATTTAAACAAAAATTTG+CGG - chr6_3:4296086-4296105 None:intergenic 20.0%
!! TTTCATAAGCTATAATAAGT+TGG + chr6_3:4296569-4296588 Msa0934460:intron 20.0%
!!! CATTTGTTGTTATATATGTT+TGG + chr6_3:4296671-4296690 Msa0934460:intron 20.0%
!! TGGAAAATTAAGAATACATA+TGG + chr6_3:4297187-4297206 Msa0934460:CDS 20.0%
!! GGAAAATTAAGAATACATAT+GGG + chr6_3:4297188-4297207 Msa0934460:CDS 20.0%
!!! CTTTTTGAATAGATTTATAC+CGG + chr6_3:4297484-4297503 Msa0934460:CDS 20.0%
!!! ATTTTGTTCTGTTTCTTTAT+TGG + chr6_3:4297745-4297764 Msa0934460:intron 20.0%
!!! CAGAAAACAAATTGATTTAT+TGG - chr6_3:4298072-4298091 None:intergenic 20.0%
!! AATCAATAAGAATAGAAAGA+TGG + chr6_3:4298581-4298600 Msa0934460:CDS 20.0%
!! TAAAATGCATGTCTATATAT+TGG + chr6_3:4298765-4298784 Msa0934460:intron 20.0%
!! AAAAAAAAAAAAACAGGGTA+AGG - chr6_3:4299057-4299076 None:intergenic 20.0%
!!! CTACTTCATGAATTTAATTT+GGG + chr6_3:4299171-4299190 Msa0934460:three_prime_UTR 20.0%
!!! TAGTTTGGGTTTTAAAAAAC+TGG - chr6_3:4293460-4293479 None:intergenic 25.0%
! ATTAAACCAAATCGATGATT+GGG - chr6_3:4293737-4293756 None:intergenic 25.0%
! AATAAAATAAATACCTGGGT+CGG - chr6_3:4293831-4293850 None:intergenic 25.0%
! TCTAATTATTACTATTGGGA+TGG + chr6_3:4293868-4293887 Msa0934460:intron 25.0%
! AAGAATTGAAACCAAATTCA+AGG + chr6_3:4294156-4294175 Msa0934460:intron 25.0%
! ATTGACATGACAAATTTACA+AGG - chr6_3:4294347-4294366 None:intergenic 25.0%
! TATCTACTTATGGCTTATAA+TGG + chr6_3:4294519-4294538 Msa0934460:intron 25.0%
!!! TTACTGTGCTTATTTTTCAT+AGG + chr6_3:4294542-4294561 Msa0934460:intron 25.0%
! AATCAAATCGATAATTGGTT+GGG - chr6_3:4294593-4294612 None:intergenic 25.0%
! AAATCAAATCGATAATTGGT+TGG - chr6_3:4294594-4294613 None:intergenic 25.0%
!!! ACCAATTATCGATTTGATTT+TGG + chr6_3:4294594-4294613 Msa0934460:five_prime_UTR 25.0%
! ACCAAAATCAAATCGATAAT+TGG - chr6_3:4294598-4294617 None:intergenic 25.0%
! GTCAACTTTCTCTTATAAAT+AGG - chr6_3:4294777-4294796 None:intergenic 25.0%
!!! TACTATTTTTGGTTTCCTTA+GGG - chr6_3:4294960-4294979 None:intergenic 25.0%
! CTAAACTTTGAATCAAACAT+AGG - chr6_3:4295088-4295107 None:intergenic 25.0%
! AAACACATAATGAAATCTAG+AGG - chr6_3:4295113-4295132 None:intergenic 25.0%
! TCTAGATTTCATTATGTGTT+TGG + chr6_3:4295112-4295131 Msa0934460:intron 25.0%
! ATAATAGAAACAGGTAACAA+TGG + chr6_3:4295357-4295376 Msa0934460:intron 25.0%
!! TTTAATTAGAGTCGTGATTT+TGG - chr6_3:4295648-4295667 None:intergenic 25.0%
! ACAAAAAGCTAACATAACAT+TGG + chr6_3:4295837-4295856 Msa0934460:intron 25.0%
! CAAAAAGCTAACATAACATT+GGG + chr6_3:4295838-4295857 Msa0934460:intron 25.0%
! GAAAATGTAATGAATGAATG+AGG - chr6_3:4295921-4295940 None:intergenic 25.0%
! GATTCATTTCTGTGAAAATT+GGG - chr6_3:4295987-4296006 None:intergenic 25.0%
! GAAATGAATCGATTAATAAC+CGG + chr6_3:4295997-4296016 Msa0934460:intron 25.0%
! CAATTATTAGCTACTTATTG+TGG - chr6_3:4296395-4296414 None:intergenic 25.0%
! CTTATCATGATAAGTGATTA+TGG + chr6_3:4296505-4296524 Msa0934460:intron 25.0%
! AGGAAAGCTTAATGAAATAA+GGG - chr6_3:4296615-4296634 None:intergenic 25.0%
! AAGGAAAGCTTAATGAAATA+AGG - chr6_3:4296616-4296635 None:intergenic 25.0%
!! ATGTATTCAAATACCTTTTG+AGG - chr6_3:4296848-4296867 None:intergenic 25.0%
! AGGTATTTGAATACATAAAG+AGG + chr6_3:4296852-4296871 Msa0934460:CDS 25.0%
! TTTGAATACATAAAGAGGAA+CGG + chr6_3:4296857-4296876 Msa0934460:CDS 25.0%
! ATAAATATAAGGATGGGATT+TGG + chr6_3:4297074-4297093 Msa0934460:CDS 25.0%
! ACTTAATTGTGTCAATAGTA+TGG - chr6_3:4297165-4297184 None:intergenic 25.0%
!! CTATTGACACAATTAAGTTT+TGG + chr6_3:4297167-4297186 Msa0934460:CDS 25.0%
! TCTTAAAAAACTCATTTGCA+GGG + chr6_3:4297404-4297423 Msa0934460:intron 25.0%
! AATCTATTCAAAAAGCTCTT+AGG - chr6_3:4297479-4297498 None:intergenic 25.0%
! AAGAAACAGAACAAAATTGT+GGG - chr6_3:4297742-4297761 None:intergenic 25.0%
! AAAGAAACAGAACAAAATTG+TGG - chr6_3:4297743-4297762 None:intergenic 25.0%
!!! TGTGTTTTTTTCTTGTTTTG+TGG + chr6_3:4297775-4297794 Msa0934460:intron 25.0%
!!! TCAATTTGTTTTCTGTTTTC+TGG + chr6_3:4298077-4298096 Msa0934460:intron 25.0%
! TTAGTTATGTAGAGGATAAA+TGG - chr6_3:4298325-4298344 None:intergenic 25.0%
! AAACTCTAATTATTTACAGG+TGG + chr6_3:4298440-4298459 Msa0934460:intron 25.0%
! AACTCTAATTATTTACAGGT+GGG + chr6_3:4298441-4298460 Msa0934460:intron 25.0%
! ATGTAAAACTCTTGTTCAAT+AGG - chr6_3:4298651-4298670 None:intergenic 25.0%
!! AAATTTTTGAATTGTGTGAC+TGG + chr6_3:4298798-4298817 Msa0934460:intron 25.0%
!!! TGCAACAAATGTCTATTTTT+AGG + chr6_3:4298851-4298870 Msa0934460:intron 25.0%
! TGTATAAAACTTACAAGTGT+AGG + chr6_3:4298876-4298895 Msa0934460:intron 25.0%
! TACAAAGAAAGAAGAAACAA+TGG + chr6_3:4298899-4298918 Msa0934460:intron 25.0%
! ACAAAGAAAGAAGAAACAAT+GGG + chr6_3:4298900-4298919 Msa0934460:intron 25.0%
! CAGATAAATAAACAATCCAA+GGG - chr6_3:4298930-4298949 None:intergenic 25.0%
! TGTTTATATGTTCTTAAACG+AGG - chr6_3:4298954-4298973 None:intergenic 25.0%
! AAATAAAAATAAACTGGTGG+TGG - chr6_3:4299017-4299036 None:intergenic 25.0%
! AGCAAATAAAAATAAACTGG+TGG - chr6_3:4299020-4299039 None:intergenic 25.0%
! GGAAGCAAATAAAAATAAAC+TGG - chr6_3:4299023-4299042 None:intergenic 25.0%
! GCTACTTCATGAATTTAATT+TGG + chr6_3:4299170-4299189 Msa0934460:exon 25.0%
! TAATTTCCAATACTATTACC+AGG + chr6_3:4299278-4299297 Msa0934460:three_prime_UTR 25.0%
! TATAGAAAATAAAGACAACC+TGG - chr6_3:4299299-4299318 None:intergenic 25.0%
! ATTTCCAACATTATTCTTTG+TGG + chr6_3:4299319-4299338 Msa0934460:three_prime_UTR 25.0%
! TTTCCAACATTATTCTTTGT+GGG + chr6_3:4299320-4299339 Msa0934460:three_prime_UTR 25.0%
!! ATAGAGAATTGCATATTTTG+TGG - chr6_3:4299376-4299395 None:intergenic 25.0%
! GTGAATAAAATCAATTTCAC+AGG - chr6_3:4299433-4299452 None:intergenic 25.0%
!!! TTGGGTTTTAAAAAACTGGT+TGG - chr6_3:4293456-4293475 None:intergenic 30.0%
! TTAACGTCATCCATTAGTTT+GGG - chr6_3:4293474-4293493 None:intergenic 30.0%
GATTAAACCAAATCGATGAT+TGG - chr6_3:4293738-4293757 None:intergenic 30.0%
ATAAAATAAATACCTGGGTC+GGG - chr6_3:4293830-4293849 None:intergenic 30.0%
!! TGTGCTTATTTTTCATAGGA+GGG + chr6_3:4294546-4294565 Msa0934460:intron 30.0%
AATACTAGTACTACATACCT+GGG - chr6_3:4294696-4294715 None:intergenic 30.0%
AAATACTAGTACTACATACC+TGG - chr6_3:4294697-4294716 None:intergenic 30.0%
CTTTCTCTTATAAATAGGAC+CGG - chr6_3:4294772-4294791 None:intergenic 30.0%
! TTGTCTTTTGTAAATAGGAC+CGG + chr6_3:4294881-4294900 Msa0934460:intron 30.0%
! TGGTTTGGACGAATAATATT+AGG + chr6_3:4294918-4294937 Msa0934460:intron 30.0%
GGTTTGGACGAATAATATTA+GGG + chr6_3:4294919-4294938 Msa0934460:intron 30.0%
!!! CTACTATTTTTGGTTTCCTT+AGG - chr6_3:4294961-4294980 None:intergenic 30.0%
AATGCTAAATATTGCCCTTA+GGG - chr6_3:4295031-4295050 None:intergenic 30.0%
AAATGCTAAATATTGCCCTT+AGG - chr6_3:4295032-4295051 None:intergenic 30.0%
!! TTAGATTTTTGAGCGAGTTT+TGG + chr6_3:4295289-4295308 Msa0934460:intron 30.0%
!! TACCTGTTTCTATTATGTCT+CGG - chr6_3:4295353-4295372 None:intergenic 30.0%
ATGACTATTGAACCCTTTAT+GGG - chr6_3:4295893-4295912 None:intergenic 30.0%
AATGACTATTGAACCCTTTA+TGG - chr6_3:4295894-4295913 None:intergenic 30.0%
TTCTGTGAAAATTGGGTTTA+CGG - chr6_3:4295980-4295999 None:intergenic 30.0%
CGATTCATTTCTGTGAAAAT+TGG - chr6_3:4295988-4296007 None:intergenic 30.0%
TGTAAACTTGTATACAAGAG+AGG + chr6_3:4296330-4296349 Msa0934460:intron 30.0%
TATAAGCAGTTTATCCAAAC+AGG - chr6_3:4296476-4296495 None:intergenic 30.0%
! TAATGAAATAAGGGCTTGTT+TGG - chr6_3:4296606-4296625 None:intergenic 30.0%
TTGAATACATAAAGAGGAAC+GGG + chr6_3:4296858-4296877 Msa0934460:CDS 30.0%
TGAAAAAGATTTCCCTTACA+AGG + chr6_3:4296889-4296908 Msa0934460:CDS 30.0%
GAAAAAGATTTCCCTTACAA+GGG + chr6_3:4296890-4296909 Msa0934460:CDS 30.0%
TTGCATAATGTTTGCATTGT+TGG + chr6_3:4297136-4297155 Msa0934460:CDS 30.0%
AGAATACATATGGGAACAAA+TGG + chr6_3:4297197-4297216 Msa0934460:CDS 30.0%
GAATACATATGGGAACAAAT+GGG + chr6_3:4297198-4297217 Msa0934460:CDS 30.0%
AATACATATGGGAACAAATG+GGG + chr6_3:4297199-4297218 Msa0934460:CDS 30.0%
!!! CTGCAAATGAGTTTTTTAAG+AGG - chr6_3:4297405-4297424 None:intergenic 30.0%
CTCTTAAAAAACTCATTTGC+AGG + chr6_3:4297403-4297422 Msa0934460:intron 30.0%
GAGGAAATTAATGAACTAGT+AGG + chr6_3:4297434-4297453 Msa0934460:CDS 30.0%
TGAATAGATTTATACCGGTA+AGG + chr6_3:4297489-4297508 Msa0934460:intron 30.0%
AATGGTTATAAAGTCCTTAC+CGG - chr6_3:4297506-4297525 None:intergenic 30.0%
ACCATTCTAAATAGAAGTTG+TGG + chr6_3:4297520-4297539 Msa0934460:intron 30.0%
ATAATCAGCTGCAAAAAAGA+AGG - chr6_3:4297644-4297663 None:intergenic 30.0%
! TGTTTTGTGGTATATATTGC+AGG + chr6_3:4297788-4297807 Msa0934460:intron 30.0%
ATAAAGCAAGCACAATTAAG+AGG - chr6_3:4297882-4297901 None:intergenic 30.0%
! TGTCACAATTTTACATCAAG+TGG - chr6_3:4297937-4297956 None:intergenic 30.0%
! CTTTAACTTAGTTTAGTGTC+AGG + chr6_3:4298263-4298282 Msa0934460:intron 30.0%
TACGCACTAATTGATACATA+TGG - chr6_3:4298297-4298316 None:intergenic 30.0%
CAAAACAGTAAGATTGCAAT+GGG - chr6_3:4298388-4298407 None:intergenic 30.0%
ACAAAACAGTAAGATTGCAA+TGG - chr6_3:4298389-4298408 None:intergenic 30.0%
ATATCATCATCAGACAATTG+TGG - chr6_3:4298531-4298550 None:intergenic 30.0%
! CAATTGTCTGATGATGATAT+TGG + chr6_3:4298531-4298550 Msa0934460:CDS 30.0%
TTAGAATTGGATATGCACAT+TGG + chr6_3:4298732-4298751 Msa0934460:intron 30.0%
CCAGATAAATAAACAATCCA+AGG - chr6_3:4298931-4298950 None:intergenic 30.0%
CCTTGGATTGTTTATTTATC+TGG + chr6_3:4298928-4298947 Msa0934460:intron 30.0%
AAAAAAAACAGGGTAAGGAA+TGG - chr6_3:4299052-4299071 None:intergenic 30.0%
!! TTTGGGCATTGACAAATATT+TGG + chr6_3:4299188-4299207 Msa0934460:three_prime_UTR 30.0%
CTTATTGAAGGACAACTAAT+AGG - chr6_3:4299238-4299257 None:intergenic 30.0%
AATCCCACAAAGAATAATGT+TGG - chr6_3:4299326-4299345 None:intergenic 30.0%
TCTATGCAACGAATTTCAAA+TGG + chr6_3:4299391-4299410 Msa0934460:three_prime_UTR 30.0%
CTATGCAACGAATTTCAAAT+GGG + chr6_3:4299392-4299411 Msa0934460:three_prime_UTR 30.0%
!!! GTTTTAAAAAACTGGTTGGC+TGG - chr6_3:4293452-4293471 None:intergenic 35.0%
GTTAACGTCATCCATTAGTT+TGG - chr6_3:4293475-4293494 None:intergenic 35.0%
GACGTTAACAAAGACAAAAC+TGG + chr6_3:4293486-4293505 Msa0934460:five_prime_UTR 35.0%
! TGTAACCTGCTATGACTTTT+AGG - chr6_3:4293522-4293541 None:intergenic 35.0%
TACTTACTCAGATCTAAGAG+AGG - chr6_3:4293566-4293585 None:intergenic 35.0%
CATCTACTTATGGCTTATCA+TGG + chr6_3:4293661-4293680 Msa0934460:five_prime_UTR 35.0%
!! CTGTGCTTATTTTTCATAGG+AGG + chr6_3:4294545-4294564 Msa0934460:intron 35.0%
TCTAAATCTAATACTCCCTC+CGG + chr6_3:4294750-4294769 Msa0934460:intron 35.0%
AACCAAATAAATACTCCCTC+CGG - chr6_3:4294903-4294922 None:intergenic 35.0%
!! GAGGGAGTATTTATTTGGTT+TGG + chr6_3:4294903-4294922 Msa0934460:intron 35.0%
TAAAAAGAACCAATGCCCTA+AGG + chr6_3:4295013-4295032 Msa0934460:intron 35.0%
AAAAAGAACCAATGCCCTAA+GGG + chr6_3:4295014-4295033 Msa0934460:intron 35.0%
GTTGCATTACAATTACGTGT+GGG - chr6_3:4295481-4295500 None:intergenic 35.0%
AGTTGCATTACAATTACGTG+TGG - chr6_3:4295482-4295501 None:intergenic 35.0%
CACTAAGGTTATGGATGAAT+TGG - chr6_3:4295717-4295736 None:intergenic 35.0%
AGCTAACATAACATTGGGTT+AGG + chr6_3:4295843-4295862 Msa0934460:intron 35.0%
TGTGTTGTGTTTGTTCGATA+GGG - chr6_3:4295952-4295971 None:intergenic 35.0%
! GATTAATAACCGGATTTGCT+CGG + chr6_3:4296007-4296026 Msa0934460:CDS 35.0%
! ATTAATAACCGGATTTGCTC+GGG + chr6_3:4296008-4296027 Msa0934460:CDS 35.0%
! GAAGAGAGAGAATTTTATCG+TGG + chr6_3:4296111-4296130 Msa0934460:CDS 35.0%
CAATCTTTCCTTGCAGTTTA+AGG + chr6_3:4296240-4296259 Msa0934460:intron 35.0%
! TTCCTTGCAGTTTAAGGTTT+AGG + chr6_3:4296246-4296265 Msa0934460:intron 35.0%
! TCCTTGCAGTTTAAGGTTTA+GGG + chr6_3:4296247-4296266 Msa0934460:intron 35.0%
GCTACTTATTGTGGTTGATT+TGG - chr6_3:4296386-4296405 None:intergenic 35.0%
AGTGCTTGTTTCAATCACAT+AGG + chr6_3:4296449-4296468 Msa0934460:intron 35.0%
GTGCTTGTTTCAATCACATA+GGG + chr6_3:4296450-4296469 Msa0934460:intron 35.0%
ATCAAGTAGCACTAAACACA+AGG - chr6_3:4296635-4296654 None:intergenic 35.0%
TATATGTTTGGGTCTACCAA+AGG + chr6_3:4296683-4296702 Msa0934460:intron 35.0%
GCTTAATTCTTCAAGAACTC+CGG - chr6_3:4296765-4296784 None:intergenic 35.0%
TTGTCTCTTTACCCTTGTAA+GGG - chr6_3:4296904-4296923 None:intergenic 35.0%
AACGTATATCATTGCGGTAA+CGG - chr6_3:4297038-4297057 None:intergenic 35.0%
GGGATTAACGTATATCATTG+CGG - chr6_3:4297044-4297063 None:intergenic 35.0%
AATATAAGGATGGGATTTGG+AGG + chr6_3:4297077-4297096 Msa0934460:CDS 35.0%
ATACATATGGGAACAAATGG+GGG + chr6_3:4297200-4297219 Msa0934460:CDS 35.0%
! ATGTGGATTGAAAGAGATTG+CGG + chr6_3:4297235-4297254 Msa0934460:CDS 35.0%
GCCACAACTTCTATTTAGAA+TGG - chr6_3:4297524-4297543 None:intergenic 35.0%
CTAAATTCAGCGTGTACTTT+AGG - chr6_3:4297567-4297586 None:intergenic 35.0%
! TTTTGCAGCTGATTATTTCG+AGG + chr6_3:4297648-4297667 Msa0934460:intron 35.0%
TGGTTTAAGTCTCAAACACT+TGG + chr6_3:4298097-4298116 Msa0934460:intron 35.0%
TGAGATGGTACAGAATTGAT+TGG - chr6_3:4298191-4298210 None:intergenic 35.0%
CTAAACAATACCAGATGAGA+TGG - chr6_3:4298206-4298225 None:intergenic 35.0%
TGCATATCCAATTCTAACAG+GGG - chr6_3:4298729-4298748 None:intergenic 35.0%
GTGCATATCCAATTCTAACA+GGG - chr6_3:4298730-4298749 None:intergenic 35.0%
TGTGCATATCCAATTCTAAC+AGG - chr6_3:4298731-4298750 None:intergenic 35.0%
!!! TTTTTTTTGTAGGGGGTACT+TGG + chr6_3:4299072-4299091 Msa0934460:intron 35.0%
! TGGCAAATTTGAAGTCAACA+GGG + chr6_3:4299137-4299156 Msa0934460:CDS 35.0%
AGTTCAGAAACGCTTATTGA+AGG - chr6_3:4299250-4299269 None:intergenic 35.0%
AGACAACCTGGTAATAGTAT+TGG - chr6_3:4299287-4299306 None:intergenic 35.0%
CTGTACCTAAAAGTCATAGC+AGG + chr6_3:4293514-4293533 Msa0934460:five_prime_UTR 40.0%
GTTACTGTGCCTATTTCCAT+AGG + chr6_3:4293683-4293702 Msa0934460:five_prime_UTR 40.0%
AACCAAATCGATGATTGGGT+GGG - chr6_3:4293733-4293752 None:intergenic 40.0%
AAACCAAATCGATGATTGGG+TGG - chr6_3:4293734-4293753 None:intergenic 40.0%
GTGTGATGAAGCCTTGAATT+TGG - chr6_3:4294170-4294189 None:intergenic 40.0%
AAGTAGATACACTGCAACGT+TGG - chr6_3:4294508-4294527 None:intergenic 40.0%
CGTTGCAGTGTATCTACTTA+TGG + chr6_3:4294509-4294528 Msa0934460:intron 40.0%
CTCTTATAAATAGGACCGGA+GGG - chr6_3:4294768-4294787 None:intergenic 40.0%
TCTCTTATAAATAGGACCGG+AGG - chr6_3:4294769-4294788 None:intergenic 40.0%
! TCTTTTGTAAATAGGACCGG+AGG + chr6_3:4294884-4294903 Msa0934460:intron 40.0%
! CTTTTGTAAATAGGACCGGA+GGG + chr6_3:4294885-4294904 Msa0934460:intron 40.0%
!!! TTTTGGTTTCCTTAGGGCAA+TGG - chr6_3:4294954-4294973 None:intergenic 40.0%
AAATATTGCCCTTAGGGCAT+TGG - chr6_3:4295025-4295044 None:intergenic 40.0%
GACCGAGACATAATAGAAAC+AGG + chr6_3:4295348-4295367 Msa0934460:five_prime_UTR 40.0%
AATGGCATGAAGCACAATGA+TGG + chr6_3:4295375-4295394 Msa0934460:intron 40.0%
TACGTGTGGGAGATGTAAAA+TGG - chr6_3:4295468-4295487 None:intergenic 40.0%
TTGAACCCTTTATGGGCTTA+TGG - chr6_3:4295886-4295905 None:intergenic 40.0%
CTGTGTTGTGTTTGTTCGAT+AGG - chr6_3:4295953-4295972 None:intergenic 40.0%
GTGAAAATTGGGTTTACGGT+CGG - chr6_3:4295976-4295995 None:intergenic 40.0%
GCGGCTTGAATCATAATTCT+TGG - chr6_3:4296067-4296086 None:intergenic 40.0%
AAGGCTTTCGACAGCATATA+TGG - chr6_3:4296729-4296748 None:intergenic 40.0%
TCTTGAAGAATTAAGCGCTC+AGG + chr6_3:4296769-4296788 Msa0934460:CDS 40.0%
AACGGTAACAAGGGATGTAA+CGG + chr6_3:4296815-4296834 Msa0934460:CDS 40.0%
! TAACGGAGGTTTTCCTCAAA+AGG + chr6_3:4296832-4296851 Msa0934460:CDS 40.0%
CTTGTCTCTTTACCCTTGTA+AGG - chr6_3:4296905-4296924 None:intergenic 40.0%
! AGATGTCGTCTCTCTAAAAG+AGG + chr6_3:4296923-4296942 Msa0934460:CDS 40.0%
! GATGTCGTCTCTCTAAAAGA+GGG + chr6_3:4296924-4296943 Msa0934460:CDS 40.0%
GGGAAGAGAGTTAAAATCAC+TGG + chr6_3:4296944-4296963 Msa0934460:CDS 40.0%
ACTGGTCATGTAAAAGTTCC+TGG + chr6_3:4296962-4296981 Msa0934460:CDS 40.0%
CATGTAAAAGTTCCTGGTCA+TGG + chr6_3:4296968-4296987 Msa0934460:CDS 40.0%
AAAGTTCCTGGTCATGGAAA+CGG + chr6_3:4296974-4296993 Msa0934460:CDS 40.0%
ACGTATATCATTGCGGTAAC+GGG - chr6_3:4297037-4297056 None:intergenic 40.0%
CGAACTCGAACAATTGTTGA+TGG + chr6_3:4297109-4297128 Msa0934460:CDS 40.0%
! AGAGATTGCGGATTACCATA+TGG + chr6_3:4297247-4297266 Msa0934460:CDS 40.0%
! ATTCAGCGTGTACTTTAGGA+GGG - chr6_3:4297563-4297582 None:intergenic 40.0%
AATTCAGCGTGTACTTTAGG+AGG - chr6_3:4297564-4297583 None:intergenic 40.0%
GCTGATTATTTCGAGGTTTG+TGG + chr6_3:4297655-4297674 Msa0934460:intron 40.0%
AGCGTAGTGTTACGTGAATT+TGG + chr6_3:4297911-4297930 Msa0934460:intron 40.0%
ACAGTGTGTGTACGTATGTT+TGG + chr6_3:4297954-4297973 Msa0934460:intron 40.0%
TCAAGCAATGCATTCACTAG+AGG - chr6_3:4298017-4298036 None:intergenic 40.0%
!! CTCAAACACTTGGTTTTTCC+AGG + chr6_3:4298107-4298126 Msa0934460:intron 40.0%
CAATTCTGTACCATCTCATC+TGG + chr6_3:4298193-4298212 Msa0934460:CDS 40.0%
TATTTACAGGTGGGACCAAA+AGG + chr6_3:4298450-4298469 Msa0934460:intron 40.0%
! TCAGTAGCAACTTCACCTTT+TGG - chr6_3:4298468-4298487 None:intergenic 40.0%
ATCATCAGACAATTGTGGAG+TGG - chr6_3:4298526-4298545 None:intergenic 40.0%
ATTGCTGTCTCTGCATATGA+CGG - chr6_3:4298564-4298583 None:intergenic 40.0%
AAAGCTTCCCCTGTTAGAAT+TGG + chr6_3:4298719-4298738 Msa0934460:intron 40.0%
AAATTTGCCAGCACGATGAT+CGG - chr6_3:4299127-4299146 None:intergenic 40.0%
! CTGGCAAATTTGAAGTCAAC+AGG + chr6_3:4299136-4299155 Msa0934460:CDS 40.0%
GACAACTAATAGGCTCAACT+AGG - chr6_3:4299228-4299247 None:intergenic 40.0%
ACTCAGATCTAAGAGAGGAG+CGG - chr6_3:4293561-4293580 None:intergenic 45.0%
CATCTTCTCAATCAACGTGC+AGG + chr6_3:4293636-4293655 Msa0934460:intron 45.0%
ACTGTGCCTATTTCCATAGG+AGG + chr6_3:4293686-4293705 Msa0934460:five_prime_UTR 45.0%
CTGTGCCTATTTCCATAGGA+GGG + chr6_3:4293687-4293706 Msa0934460:five_prime_UTR 45.0%
TGTGCCTATTTCCATAGGAG+GGG + chr6_3:4293688-4293707 Msa0934460:five_prime_UTR 45.0%
ACAACCCCTCCTATGGAAAT+AGG - chr6_3:4293695-4293714 None:intergenic 45.0%
! ATCCCACCCAATCATCGATT+TGG + chr6_3:4293728-4293747 Msa0934460:five_prime_UTR 45.0%
AAATAAATACCTGGGTCGGG+TGG - chr6_3:4293827-4293846 None:intergenic 45.0%
TAGTACTACATACCTGGGTC+GGG - chr6_3:4294691-4294710 None:intergenic 45.0%
CTAGTACTACATACCTGGGT+CGG - chr6_3:4294692-4294711 None:intergenic 45.0%
!! GACCGGAGGGAGTATTTATT+TGG + chr6_3:4294898-4294917 Msa0934460:intron 45.0%
TCTTGCTAACCATTGCCCTA+AGG + chr6_3:4294942-4294961 Msa0934460:intron 45.0%
CGCTGTTGTGTGATTTGACA+TGG + chr6_3:4295690-4295709 Msa0934460:intron 45.0%
TGTGTGCCATAAGCCCATAA+AGG + chr6_3:4295877-4295896 Msa0934460:intron 45.0%
GTGTGCCATAAGCCCATAAA+GGG + chr6_3:4295878-4295897 Msa0934460:intron 45.0%
TTATCGTGGTCGCATTGTTC+AGG + chr6_3:4296125-4296144 Msa0934460:CDS 45.0%
TATCGTGGTCGCATTGTTCA+GGG + chr6_3:4296126-4296145 Msa0934460:CDS 45.0%
TCGCTCCGTTACATATCCTA+GGG + chr6_3:4296191-4296210 Msa0934460:CDS 45.0%
GGCAACCCTAGGATATGTAA+CGG - chr6_3:4296199-4296218 None:intergenic 45.0%
TTACTCACCACATTCGCCTT+GGG - chr6_3:4296220-4296239 None:intergenic 45.0%
GCCCTAAACCTTAAACTGCA+AGG - chr6_3:4296251-4296270 None:intergenic 45.0%
TCAATCACATAGGGCCTGTT+TGG + chr6_3:4296459-4296478 Msa0934460:intron 45.0%
GACAGCATATATGGAAGCCA+GGG - chr6_3:4296720-4296739 None:intergenic 45.0%
! AGCCTTATCCACATCAAGAC+CGG + chr6_3:4296743-4296762 Msa0934460:CDS 45.0%
GAAATCGTGTCTTGTGACAG+AGG + chr6_3:4296791-4296810 Msa0934460:CDS 45.0%
GTGTCTTGTGACAGAGGTAA+CGG + chr6_3:4296797-4296816 Msa0934460:CDS 45.0%
! TGACAGAGGTAACGGTAACA+AGG + chr6_3:4296805-4296824 Msa0934460:CDS 45.0%
! GACAGAGGTAACGGTAACAA+GGG + chr6_3:4296806-4296825 Msa0934460:CDS 45.0%
GTGACGAGAGTCATTTGCTT+CGG + chr6_3:4296996-4297015 Msa0934460:CDS 45.0%
TGACGAGAGTCATTTGCTTC+GGG + chr6_3:4296997-4297016 Msa0934460:CDS 45.0%
TAAGGATGGGATTTGGAGGA+AGG + chr6_3:4297081-4297100 Msa0934460:CDS 45.0%
ATATGGGAACAAATGGGGGA+TGG + chr6_3:4297204-4297223 Msa0934460:CDS 45.0%
TATGGGAACAAATGGGGGAT+GGG + chr6_3:4297205-4297224 Msa0934460:CDS 45.0%
CATCGAGAAGGATTTCGCAA+CGG - chr6_3:4297273-4297292 None:intergenic 45.0%
!! CAGGATAATGAGCATCGAGA+AGG - chr6_3:4297285-4297304 None:intergenic 45.0%
TGCTCATTATCCTGTGCTAG+AGG + chr6_3:4297291-4297310 Msa0934460:CDS 45.0%
AAGAAAGCTACCTCTAGCAC+AGG - chr6_3:4297304-4297323 None:intergenic 45.0%
TGGACACTGAACAGTTTCAG+TGG + chr6_3:4297675-4297694 Msa0934460:CDS 45.0%
CACGTGCTAATATCTATCGC+TGG + chr6_3:4297987-4298006 Msa0934460:intron 45.0%
CGCTTTCCTATTCTCCAAGA+GGG + chr6_3:4298130-4298149 Msa0934460:CDS 45.0%
CTATTCTCCAAGAGGGAAGA+GGG + chr6_3:4298137-4298156 Msa0934460:CDS 45.0%
GTAAGATTGCAATGGGAGAG+TGG - chr6_3:4298381-4298400 None:intergenic 45.0%
AGAAACAATGGGTCTTCCCT+TGG + chr6_3:4298911-4298930 Msa0934460:intron 45.0%
! TGCGTATAGCTTGCCAGAAA+TGG + chr6_3:4298976-4298995 Msa0934460:intron 45.0%
CAGGGTAAGGAATGGAGAAA+GGG - chr6_3:4299044-4299063 None:intergenic 45.0%
ACAGGGTAAGGAATGGAGAA+AGG - chr6_3:4299045-4299064 None:intergenic 45.0%
!!! TTTTTGTAGGGGGTACTTGG+AGG + chr6_3:4299075-4299094 Msa0934460:intron 45.0%
ACAATTACCGATCATCGTGC+TGG + chr6_3:4299117-4299136 Msa0934460:CDS 45.0%
!! AAAAATAAAATAAAAAATCA+AGG - chr6_3:4295268-4295287 None:intergenic 5.0%
!! TTATATTTATAAAATTCTTT+GGG - chr6_3:4297064-4297083 None:intergenic 5.0%
!!! ACTTTTTTTTTTTATTAAAT+GGG + chr6_3:4297708-4297727 Msa0934460:intron 5.0%
CGTGCAGGTGCATCTACTTA+TGG + chr6_3:4293651-4293670 Msa0934460:intron 50.0%
CAGATTGACAACCCCTCCTA+TGG - chr6_3:4293702-4293721 None:intergenic 50.0%
ATCGTGGTCGCATTGTTCAG+GGG + chr6_3:4296127-4296146 Msa0934460:CDS 50.0%
! GATATGTAACGGAGCGAGCA+TGG - chr6_3:4296188-4296207 None:intergenic 50.0%
CTCGCTCCGTTACATATCCT+AGG + chr6_3:4296190-4296209 Msa0934460:CDS 50.0%
ACATATCCTAGGGTTGCCCA+AGG + chr6_3:4296201-4296220 Msa0934460:CDS 50.0%
GTTACTCACCACATTCGCCT+TGG - chr6_3:4296221-4296240 None:intergenic 50.0%
CAGGGCATAGCAACATCCTT+TGG - chr6_3:4296702-4296721 None:intergenic 50.0%
CAAAGGATGTTGCTATGCCC+TGG + chr6_3:4296700-4296719 Msa0934460:intron 50.0%
CGACAGCATATATGGAAGCC+AGG - chr6_3:4296721-4296740 None:intergenic 50.0%
CTCCGGTCTTGATGTGGATA+AGG - chr6_3:4296748-4296767 None:intergenic 50.0%
CAAGAACTCCGGTCTTGATG+TGG - chr6_3:4296754-4296773 None:intergenic 50.0%
GGTAACAAGGGATGTAACGG+AGG + chr6_3:4296818-4296837 Msa0934460:CDS 50.0%
AGGATTTCGCAACGGCCATA+TGG - chr6_3:4297265-4297284 None:intergenic 50.0%
!! TCATTTGCAGGGCACTGAAG+AGG + chr6_3:4297415-4297434 Msa0934460:intron 50.0%
!! TTGGAGAATAGGAAAGCGCC+TGG - chr6_3:4298128-4298147 None:intergenic 50.0%
GCGCTTTCCTATTCTCCAAG+AGG + chr6_3:4298129-4298148 Msa0934460:CDS 50.0%
CCTCTTCCCTCTTGGAGAAT+AGG - chr6_3:4298139-4298158 None:intergenic 50.0%
CCTATTCTCCAAGAGGGAAG+AGG + chr6_3:4298136-4298155 Msa0934460:CDS 50.0%
ATCTTTGCCCTCTTCCCTCT+TGG - chr6_3:4298147-4298166 None:intergenic 50.0%
GAAGTTGCTACTGAGCAACC+TGG + chr6_3:4298474-4298493 Msa0934460:CDS 50.0%
! TTTTATACGCCACCCGACCC+AGG + chr6_3:4293815-4293834 Msa0934460:five_prime_UTR 55.0%
! TTTTATACGCCACCCGACCC+AGG + chr6_3:4293815-4293834 Msa0934460:five_prime_UTR 55.0%
TACTACATACCTGGGTCGGG+TGG - chr6_3:4294688-4294707 None:intergenic 55.0%
! AACCGGATTTGCTCGGGTCT+TGG + chr6_3:4296014-4296033 Msa0934460:CDS 55.0%
! ACCGGATTTGCTCGGGTCTT+GGG + chr6_3:4296015-4296034 Msa0934460:CDS 55.0%
ACCCAAGACCCGAGCAAATC+CGG - chr6_3:4296019-4296038 None:intergenic 55.0%
TCGTGGTCGCATTGTTCAGG+GGG + chr6_3:4296128-4296147 Msa0934460:CDS 55.0%
TCGTCACCGTTTCCATGACC+AGG - chr6_3:4296983-4297002 None:intergenic 55.0%
!! GGGGGATGGGAGGTTTTATG+TGG + chr6_3:4297218-4297237 Msa0934460:CDS 55.0%
GTGGCAACAGCAGATGCCAT+GGG - chr6_3:4298507-4298526 None:intergenic 55.0%
AGTGGCAACAGCAGATGCCA+TGG - chr6_3:4298508-4298527 None:intergenic 55.0%
AGAAATGGCCACCGTTGCTG+CGG + chr6_3:4298991-4299010 Msa0934460:intron 55.0%
!! TTGTAGGGGGTACTTGGAGG+TGG + chr6_3:4299078-4299097 Msa0934460:intron 55.0%
! GGATTTGCTCGGGTCTTGGG+TGG + chr6_3:4296018-4296037 Msa0934460:CDS 60.0%
! CGTCTCTGACTTGCCAGACG+AGG + chr6_3:4296152-4296171 Msa0934460:CDS 60.0%
ACTTGCCAGACGAGGTCGAC+TGG + chr6_3:4296160-4296179 Msa0934460:CDS 60.0%
CATTCGCCTTGGGCAACCCT+AGG - chr6_3:4296210-4296229 None:intergenic 60.0%
AGGGTTGCCCAAGGCGAATG+TGG + chr6_3:4296210-4296229 Msa0934460:CDS 60.0%
GGGAACAAATGGGGGATGGG+AGG + chr6_3:4297208-4297227 Msa0934460:CDS 60.0%
GCAACCTGGCAAGAGTCCCA+TGG + chr6_3:4298488-4298507 Msa0934460:CDS 60.0%
GATGCCATGGGACTCTTGCC+AGG - chr6_3:4298495-4298514 None:intergenic 60.0%
GCAGCAACGGTGGCCATTTC+TGG - chr6_3:4298992-4299011 None:intergenic 60.0%
! TGGTGCCAGTCGACCTCGTC+TGG - chr6_3:4296168-4296187 None:intergenic 65.0%
!! ACTGGTGGTGGCCGCAGCAA+CGG - chr6_3:4299005-4299024 None:intergenic 65.0%
!! GGGGGTACTTGGAGGTGGTC+AGG + chr6_3:4299083-4299102 Msa0934460:intron 65.0%
! GGTGGTGGCCGCAGCAACGG+TGG - chr6_3:4299002-4299021 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr6_3 gene 4293439 4299461 4293439 ID=Msa0934460;Name=Msa0934460
chr6_3 mRNA 4293439 4299461 4293439 ID=Msa0934460-mRNA-1;Parent=Msa0934460;Name=Msa0934460-mRNA-1;_AED=0.24;_eAED=0.24;_QI=532|1|1|1|0.63|0.58|12|291|435
chr6_3 exon 4293439 4293578 4293439 ID=Msa0934460-mRNA-1:exon:1347;Parent=Msa0934460-mRNA-1
chr6_3 exon 4293658 4293836 4293658 ID=Msa0934460-mRNA-1:exon:1348;Parent=Msa0934460-mRNA-1
chr6_3 exon 4294564 4294697 4294564 ID=Msa0934460-mRNA-1:exon:1349;Parent=Msa0934460-mRNA-1
chr6_3 exon 4295293 4295369 4295293 ID=Msa0934460-mRNA-1:exon:1350;Parent=Msa0934460-mRNA-1
chr6_3 exon 4295998 4296231 4295998 ID=Msa0934460-mRNA-1:exon:1351;Parent=Msa0934460-mRNA-1
chr6_3 exon 4296705 4297312 4296705 ID=Msa0934460-mRNA-1:exon:1352;Parent=Msa0934460-mRNA-1
chr6_3 exon 4297425 4297505 4297425 ID=Msa0934460-mRNA-1:exon:1353;Parent=Msa0934460-mRNA-1
chr6_3 exon 4297656 4297696 4297656 ID=Msa0934460-mRNA-1:exon:1354;Parent=Msa0934460-mRNA-1
chr6_3 exon 4297810 4297832 4297810 ID=Msa0934460-mRNA-1:exon:1355;Parent=Msa0934460-mRNA-1
chr6_3 exon 4298129 4298214 4298129 ID=Msa0934460-mRNA-1:exon:1356;Parent=Msa0934460-mRNA-1
chr6_3 exon 4298459 4298608 4298459 ID=Msa0934460-mRNA-1:exon:1357;Parent=Msa0934460-mRNA-1
chr6_3 exon 4299084 4299461 4299084 ID=Msa0934460-mRNA-1:exon:1358;Parent=Msa0934460-mRNA-1
chr6_3 five_prime_UTR 4293439 4293578 4293439 ID=Msa0934460-mRNA-1:five_prime_utr;Parent=Msa0934460-mRNA-1
chr6_3 five_prime_UTR 4293658 4293836 4293658 ID=Msa0934460-mRNA-1:five_prime_utr;Parent=Msa0934460-mRNA-1
chr6_3 five_prime_UTR 4294564 4294697 4294564 ID=Msa0934460-mRNA-1:five_prime_utr;Parent=Msa0934460-mRNA-1
chr6_3 five_prime_UTR 4295293 4295369 4295293 ID=Msa0934460-mRNA-1:five_prime_utr;Parent=Msa0934460-mRNA-1
chr6_3 five_prime_UTR 4295998 4295999 4295998 ID=Msa0934460-mRNA-1:five_prime_utr;Parent=Msa0934460-mRNA-1
chr6_3 CDS 4296000 4296231 4296000 ID=Msa0934460-mRNA-1:cds;Parent=Msa0934460-mRNA-1
chr6_3 CDS 4296705 4297312 4296705 ID=Msa0934460-mRNA-1:cds;Parent=Msa0934460-mRNA-1
chr6_3 CDS 4297425 4297505 4297425 ID=Msa0934460-mRNA-1:cds;Parent=Msa0934460-mRNA-1
chr6_3 CDS 4297656 4297696 4297656 ID=Msa0934460-mRNA-1:cds;Parent=Msa0934460-mRNA-1
chr6_3 CDS 4297810 4297832 4297810 ID=Msa0934460-mRNA-1:cds;Parent=Msa0934460-mRNA-1
chr6_3 CDS 4298129 4298214 4298129 ID=Msa0934460-mRNA-1:cds;Parent=Msa0934460-mRNA-1
chr6_3 CDS 4298459 4298608 4298459 ID=Msa0934460-mRNA-1:cds;Parent=Msa0934460-mRNA-1
chr6_3 CDS 4299084 4299170 4299084 ID=Msa0934460-mRNA-1:cds;Parent=Msa0934460-mRNA-1
chr6_3 three_prime_UTR 4299171 4299461 4299171 ID=Msa0934460-mRNA-1:three_prime_utr;Parent=Msa0934460-mRNA-1
Gene Sequence

>Msa0934460

ATGAATCGATTAATAACCGGATTTGCTCGGGTCTTGGGTGGATTTTCTCTTATTCATTCTTCTTCCAAGAATTATGATTCAAGCCGCAAATTTTTGTTTAAATCAGACGAAGAAGAGAGAGAATTTTATCGTGGTCGCATTGTTCAGGGGGACGTCTCTGACTTGCCAGACGAGGTCGACTGGCACCATGCTCGCTCCGTTACATATCCTAGGGTTGCCCAAGGCGAATGTGGATGTTGCTATGCCCTGGCTTCCATATATGCTGTCGAAAGCCTTATCCACATCAAGACCGGAGTTCTTGAAGAATTAAGCGCTCAGGAAATCGTGTCTTGTGACAGAGGTAACGGTAACAAGGGATGTAACGGAGGTTTTCCTCAAAAGGTATTTGAATACATAAAGAGGAACGGGATTTCTCTTGAAAAAGATTTCCCTTACAAGGGTAAAGAGACAAGATGTCGTCTCTCTAAAAGAGGGAAGAGAGTTAAAATCACTGGTCATGTAAAAGTTCCTGGTCATGGAAACGGTGACGAGAGTCATTTGCTTCGGGCTGTTGCAAAACAGCCCGTTACCGCAATGATATACGTTAATCCCAAAGAATTTTATAAATATAAGGATGGGATTTGGAGGAAGGAATATCGAACTCGAACAATTGTTGATGGTGCATTGCATAATGTTTGCATTGTTGGATACCATACTATTGACACAATTAAGTTTTGGAAAATTAAGAATACATATGGGAACAAATGGGGGATGGGAGGTTTTATGTGGATTGAAAGAGATTGCGGATTACCATATGGCCGTTGCGAAATCCTTCTCGATGCTCATTATCCTGTGCTAGAGGGCACTGAAGAGGAAATTAATGAACTAGTAGGTAACACAAAAGCAGAGCAGCCTAAGAGCTTTTTGAATAGATTTATACCGCTGATTATTTCGAGGTTTGTGGACACTGAACAGTTTCAGTGGTTTAATGATTTGAAAGAAATCGGCGCTTTCCTATTCTCCAAGAGGGAAGAGGGCAAAGATGACACTACTAGTTGCAGTCAACCAATCAATTCTGTACCATCTCATCTGGTGGGACCAAAAGGTGAAGTTGCTACTGAGCAACCTGGCAAGAGTCCCATGGCATCTGCTGTTGCCACTCCACAATTGTCTGATGATGATATTGGCATATCACCGTCATATGCAGAGACAGCAATCAATAAGAATAGAAAGATGGCAGACGGGGTACTTGGAGGTGGTCAGGATACATCAGTTACAATTACCGATCATCGTGCTGGCAAATTTGAAGTCAACAGGGAAGATTGCTAG
Protein sequence

>Msa0934460

MNRLITGFARVLGGFSLIHSSSKNYDSSRKFLFKSDEEEREFYRGRIVQGDVSDLPDEVDWHHARSVTYPRVAQGECGCCYALASIYAVESLIHIKTGVLEELSAQEIVSCDRGNGNKGCNGGFPQKVFEYIKRNGISLEKDFPYKGKETRCRLSKRGKRVKITGHVKVPGHGNGDESHLLRAVAKQPVTAMIYVNPKEFYKYKDGIWRKEYRTRTIVDGALHNVCIVGYHTIDTIKFWKIKNTYGNKWGMGGFMWIERDCGLPYGRCEILLDAHYPVLEGTEEEINELVGNTKAEQPKSFLNRFIPLIISRFVDTEQFQWFNDLKEIGAFLFSKREEGKDDTTSCSQPINSVPSHLVGPKGEVATEQPGKSPMASAVATPQLSDDDIGISPSYAETAINKNRKMADGVLGGGQDTSVTITDHRAGKFEVNREDC*