AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0935790

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0935790 MtrunA17_Chr6g0451571 96.396 333 12 0 3 335 2 334 0.0 665
Msa0935790 MtrunA17_Chr8g0364291 52.597 308 143 2 30 335 18 324 9.04e-122 353
Msa0935790 MtrunA17_Chr1g0197411 50.156 321 156 3 18 335 11 330 7.28e-118 343
Msa0935790 MtrunA17_Chr7g0225221 45.066 304 162 4 32 335 22 320 6.06e-91 274
Msa0935790 MtrunA17_Chr1g0148021 43.252 326 176 6 14 335 8 328 2.31e-88 268
Msa0935790 MtrunA17_Chr5g0401431 42.368 321 179 4 15 331 7 325 3.03e-85 260
Msa0935790 MtrunA17_Chr4g0046131 41.908 346 173 11 9 331 2 342 7.17e-82 252
Msa0935790 MtrunA17_Chr1g0204011 44.548 321 164 8 18 335 13 322 7.41e-80 246
Msa0935790 MtrunA17_Chr4g0072091 43.464 306 164 6 34 335 23 323 1.39e-77 240
Msa0935790 MtrunA17_Chr4g0053871 42.525 301 166 4 33 331 25 320 5.22e-77 239
Msa0935790 MtrunA17_Chr1g0188431 37.092 337 194 7 3 335 5 327 1.54e-68 217
Msa0935790 MtrunA17_Chr5g0405991 39.812 319 179 8 21 335 7 316 5.06e-68 216
Msa0935790 MtrunA17_Chr4g0075241 36.335 322 201 3 15 335 9 327 2.07e-67 214
Msa0935790 MtrunA17_Chr8g0371381 40.924 303 168 7 35 335 26 319 1.53e-66 212
Msa0935790 MtrunA17_Chr4g0068621 40.656 305 175 5 33 335 36 336 4.17e-66 211
Msa0935790 MtrunA17_Chr3g0129051 37.615 327 185 6 14 335 10 322 5.10e-66 211
Msa0935790 MtrunA17_Chr1g0164891 40.264 303 172 6 39 335 93 392 6.09e-66 213
Msa0935790 MtrunA17_Chr2g0320091 37.963 324 191 5 14 335 3 318 1.99e-65 209
Msa0935790 MtrunA17_Chr7g0244461 39.297 313 180 5 24 335 9 312 7.38e-65 207
Msa0935790 MtrunA17_Chr4g0074851 37.500 320 188 5 18 335 19 328 7.81e-65 208
Msa0935790 MtrunA17_Chr6g0477071 36.697 327 186 8 15 335 31 342 7.92e-65 208
Msa0935790 MtrunA17_Chr6g0460711 39.252 321 183 6 15 335 6 314 9.14e-65 207
Msa0935790 MtrunA17_Chr3g0114451 36.760 321 191 5 19 335 6 318 1.32e-64 207
Msa0935790 MtrunA17_Chr5g0404721 37.333 300 182 5 39 335 34 330 1.46e-64 207
Msa0935790 MtrunA17_Chr4g0013191 40.667 300 166 6 39 335 50 340 1.84e-64 207
Msa0935790 MtrunA17_Chr7g0254231 39.535 301 171 5 35 335 22 311 3.16e-64 206
Msa0935790 MtrunA17_Chr7g0254201 38.636 308 181 4 28 335 13 312 4.81e-64 205
Msa0935790 MtrunA17_Chr5g0432441 36.607 336 190 9 10 335 4 326 6.87e-64 205
Msa0935790 MtrunA17_Chr2g0292181 39.355 310 179 6 31 335 34 339 9.80e-64 206
Msa0935790 MtrunA17_Chr4g0024121 37.942 311 180 8 31 335 23 326 1.00e-63 205
Msa0935790 MtrunA17_Chr1g0157051 36.842 323 190 9 16 334 5 317 1.11e-63 204
Msa0935790 MtrunA17_Chr4g0013721 38.511 309 178 7 31 335 96 396 2.45e-63 206
Msa0935790 MtrunA17_Chr2g0292241 39.677 310 178 7 31 335 25 330 8.49e-63 203
Msa0935790 MtrunA17_Chr1g0213061 40.952 315 171 9 25 335 18 321 1.21e-62 202
Msa0935790 MtrunA17_Chr5g0400331 38.065 310 179 6 35 335 26 331 1.45e-62 202
Msa0935790 MtrunA17_Chr2g0292251 38.907 311 179 7 31 335 24 329 1.90e-62 202
Msa0935790 MtrunA17_Chr2g0292211 39.032 310 180 6 31 335 36 341 1.98e-62 202
Msa0935790 MtrunA17_Chr7g0268501 39.172 314 175 10 28 335 17 320 2.10e-62 201
Msa0935790 MtrunA17_Chr7g0268521 39.172 314 175 10 28 335 17 320 2.10e-62 201
Msa0935790 MtrunA17_Chr1g0194151 37.838 333 191 8 14 335 6 333 5.07e-62 201
Msa0935790 MtrunA17_Chr2g0292151 39.550 311 177 7 31 335 25 330 5.22e-62 201
Msa0935790 MtrunA17_Chr2g0320071 36.391 327 191 6 14 335 3 317 6.79e-62 200
Msa0935790 MtrunA17_Chr5g0438021 34.663 326 195 5 16 335 12 325 7.32e-62 200
Msa0935790 MtrunA17_Chr4g0013821 37.267 322 190 7 18 335 11 324 5.13e-61 198
Msa0935790 MtrunA17_Chr4g0076211 40.264 303 167 9 36 335 42 333 6.13e-61 198
Msa0935790 MtrunA17_Chr7g0244451 38.312 308 172 6 33 335 22 316 1.50e-60 196
Msa0935790 MtrunA17_Chr7g0258811 36.012 336 206 6 5 335 40 371 2.52e-60 197
Msa0935790 MtrunA17_Chr4g0013171 35.061 328 202 7 11 335 2 321 2.87e-60 196
Msa0935790 MtrunA17_Chr7g0224371 36.474 329 195 7 11 335 4 322 5.07e-60 195
Msa0935790 MtrunA17_Chr6g0467251 36.577 298 179 5 35 331 36 324 8.28e-60 195
Msa0935790 MtrunA17_Chr2g0296621 37.049 305 175 9 35 335 50 341 1.17e-59 195
Msa0935790 MtrunA17_Chr4g0013201 38.158 304 178 5 33 335 44 338 1.18e-59 194
Msa0935790 MtrunA17_Chr1g0181481 36.928 306 185 4 32 335 24 323 1.28e-59 194
Msa0935790 MtrunA17_Chr3g0128061 38.636 308 183 4 31 335 22 326 1.37e-59 194
Msa0935790 MtrunA17_Chr2g0292091 35.562 329 201 8 12 335 3 325 1.85e-59 194
Msa0935790 MtrunA17_Chr3g0106901 39.375 320 183 6 18 335 13 323 2.21e-59 193
Msa0935790 MtrunA17_Chr1g0181511 36.275 306 187 4 32 335 24 323 2.43e-59 193
Msa0935790 MtrunA17_Chr2g0320101 35.922 309 182 5 31 335 21 317 2.78e-59 193
Msa0935790 MtrunA17_Chr8g0372601 36.275 306 189 5 33 335 28 330 2.86e-59 193
Msa0935790 MtrunA17_Chr1g0194271 37.736 318 182 6 31 335 26 340 2.87e-59 194
Msa0935790 MtrunA17_Chr3g0129061 36.280 328 188 6 14 335 10 322 3.40e-59 193
Msa0935790 MtrunA17_Chr2g0322861 36.533 323 191 9 21 335 70 386 4.03e-59 195
Msa0935790 MtrunA17_Chr3g0107881 37.942 311 178 8 31 335 23 324 5.23e-59 192
Msa0935790 MtrunA17_Chr5g0402581 34.568 324 198 6 18 335 11 326 1.60e-58 191
Msa0935790 MtrunA17_Chr2g0320061 35.366 328 194 7 14 335 3 318 2.47e-58 191
Msa0935790 MtrunA17_Chr4g0038161 35.625 320 194 6 20 335 9 320 3.13e-58 190
Msa0935790 MtrunA17_Chr4g0070951 37.309 327 186 10 21 335 10 329 1.21e-57 189
Msa0935790 MtrunA17_Chr3g0106921 34.084 311 194 6 28 335 18 320 1.54e-57 189
Msa0935790 MtrunA17_Chr5g0402571 33.951 324 201 5 18 335 10 326 1.86e-57 189
Msa0935790 MtrunA17_Chr2g0320031 34.462 325 202 6 14 335 3 319 2.19e-57 188
Msa0935790 MtrunA17_Chr1g0181431 35.410 305 189 4 33 335 25 323 2.29e-57 188
Msa0935790 MtrunA17_Chr3g0129041 35.671 328 190 6 14 335 10 322 3.41e-57 188
Msa0935790 MtrunA17_Chr2g0279041 36.111 324 192 8 18 335 11 325 8.72e-57 187
Msa0935790 MtrunA17_Chr4g0038151 35.738 305 190 4 32 335 22 321 1.64e-56 186
Msa0935790 MtrunA17_Chr2g0292261 36.129 310 189 6 31 335 25 330 1.95e-56 187
Msa0935790 MtrunA17_Chr4g0013181 35.667 300 183 6 38 335 62 353 7.50e-56 185
Msa0935790 MtrunA17_Chr4g0043391 34.579 321 197 7 20 335 12 324 1.04e-55 184
Msa0935790 MtrunA17_Chr2g0292111 36.774 310 187 6 31 335 25 330 1.39e-55 184
Msa0935790 MtrunA17_Chr2g0320051 35.161 310 184 6 31 335 21 318 2.26e-55 183
Msa0935790 MtrunA17_Chr2g0292271 36.050 319 195 6 22 335 16 330 3.49e-55 183
Msa0935790 MtrunA17_Chr2g0291751 36.656 311 186 7 31 335 25 330 4.22e-55 183
Msa0935790 MtrunA17_Chr4g0038171 35.220 318 199 6 20 335 9 321 4.57e-55 182
Msa0935790 MtrunA17_Chr2g0292101 36.538 312 181 7 33 335 23 326 5.55e-55 182
Msa0935790 MtrunA17_Chr2g0292291 34.505 313 191 5 31 335 26 332 1.21e-54 182
Msa0935790 MtrunA17_Chr1g0175561 36.556 331 196 11 12 335 3 326 1.62e-54 181
Msa0935790 MtrunA17_Chr2g0299691 35.843 332 186 9 20 335 38 358 4.42e-54 181
Msa0935790 MtrunA17_Chr5g0432341 36.893 309 179 8 33 335 23 321 5.81e-54 179
Msa0935790 MtrunA17_Chr3g0136751 33.841 328 205 6 13 335 2 322 6.36e-54 179
Msa0935790 MtrunA17_Chr5g0432351 36.246 309 181 8 33 335 23 321 9.20e-54 179
Msa0935790 MtrunA17_Chr5g0413051 36.808 307 178 8 39 335 77 377 1.00e-53 180
Msa0935790 MtrunA17_Chr5g0432331 34.877 324 195 8 18 335 39 352 7.76e-53 177
Msa0935790 MtrunA17_Chr6g0467121 35.880 301 182 5 35 335 74 363 2.49e-52 177
Msa0935790 MtrunA17_Chr4g0063671 35.077 325 189 9 22 335 7 320 1.38e-51 173
Msa0935790 MtrunA17_Chr2g0329641 37.013 308 181 7 34 335 35 335 2.58e-51 173
Msa0935790 MtrunA17_Chr5g0421411 36.620 284 168 7 60 335 6 285 3.63e-51 171
Msa0935790 MtrunA17_Chr6g0467161 31.611 329 206 6 17 335 17 336 6.43e-51 172
Msa0935790 MtrunA17_Chr1g0155611 34.967 306 190 6 35 335 46 347 1.44e-50 171
Msa0935790 MtrunA17_Chr2g0278671 34.713 314 186 8 31 335 20 323 4.75e-47 161
Msa0935790 MtrunA17_Chr2g0279061 38.077 260 148 6 82 335 14 266 7.51e-47 159
Msa0935790 MtrunA17_Chr2g0316791 33.433 335 187 9 33 334 74 405 1.01e-45 160
Msa0935790 MtrunA17_Chr2g0316481 32.836 335 189 9 33 334 74 405 3.62e-45 159
Msa0935790 MtrunA17_Chr2g0316831 32.836 335 189 9 33 334 110 441 9.98e-45 158
Msa0935790 MtrunA17_Chr2g0316191 32.440 336 190 8 33 334 74 406 1.55e-44 157
Msa0935790 MtrunA17_Chr2g0311251 32.537 335 189 9 33 334 9 339 4.21e-42 149
Msa0935790 MtrunA17_Chr2g0311241 30.851 376 182 11 33 334 58 429 4.40e-40 145
Msa0935790 MtrunA17_Chr3g0114461 39.378 193 110 3 144 335 6 192 1.78e-38 135
Msa0935790 MtrunA17_Chr5g0432401 30.650 323 169 8 18 334 12 285 8.90e-37 134
Msa0935790 MtrunA17_Chr4g0004591 28.349 321 167 5 35 334 77 355 2.86e-34 129
Msa0935790 MtrunA17_Chr2g0292281 33.810 210 124 4 130 335 18 216 2.05e-32 120
Msa0935790 MtrunA17_Chr2g0316811 38.372 172 101 3 33 202 48 216 4.21e-31 119
Msa0935790 MtrunA17_Chr2g0316141 30.741 270 167 5 82 334 11 277 2.51e-27 108
Msa0935790 MtrunA17_Chr2g0316181 30.741 270 167 5 82 334 11 277 2.51e-27 108
Msa0935790 MtrunA17_Chr1g0181501 34.715 193 116 4 147 335 3 189 4.27e-25 100
Msa0935790 MtrunA17_Chr1g0181491 37.600 125 74 3 32 156 9 129 1.56e-19 84.0
Msa0935790 MtrunA17_Chr3g0114491 37.069 116 71 2 32 147 15 128 3.11e-18 80.1
Msa0935790 MtrunA17_Chr7g0254181 43.396 106 55 3 98 203 22 122 1.49e-17 78.6
Msa0935790 MtrunA17_Chr3g0137751 26.217 267 134 7 58 314 97 310 3.69e-16 78.2
Msa0935790 MtrunA17_Chr5g0432321 31.707 123 77 2 158 280 17 132 4.10e-15 71.2
Msa0935790 MtrunA17_Chr4g0013811 33.333 78 52 0 143 220 1 78 8.74e-13 63.2
Msa0935790 MtrunA17_Chr7g0254171 42.466 73 40 1 82 154 4 74 5.13e-12 62.8
Msa0935790 MtrunA17_Chr1g0196191 57.377 61 24 1 82 142 31 89 8.44e-12 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0935790 AT5G40150.1 64.590 305 104 2 31 335 28 328 6.68e-152 430
Msa0935790 AT3G28200.1 64.918 305 102 2 31 335 17 316 1.73e-150 426
Msa0935790 AT5G47000.1 55.814 301 130 2 35 335 33 330 4.86e-124 359
Msa0935790 AT1G24110.1 54.072 307 139 2 30 335 17 322 1.46e-122 355
Msa0935790 AT4G17690.1 55.150 301 131 2 35 335 26 322 5.98e-120 348
Msa0935790 AT4G37530.1 45.192 312 165 4 28 335 20 329 6.61e-91 275
Msa0935790 AT5G14130.1 42.857 322 176 5 18 335 13 330 1.76e-87 266
Msa0935790 AT5G14130.2 42.857 322 176 5 18 335 54 371 3.02e-87 267
Msa0935790 AT4G37520.1 43.974 307 166 4 33 335 25 329 7.32e-87 265
Msa0935790 AT5G67400.1 43.689 309 168 4 31 335 23 329 3.49e-86 263
Msa0935790 AT4G37520.2 43.974 307 163 5 33 335 25 326 9.47e-85 259
Msa0935790 AT2G18980.1 41.617 334 179 6 6 335 2 323 1.87e-82 253
Msa0935790 AT3G49960.1 41.748 309 174 4 31 335 23 329 2.69e-80 248
Msa0935790 AT4G37530.2 45.627 263 137 4 28 286 20 280 4.28e-77 238
Msa0935790 AT4G30170.1 40.717 307 172 5 33 335 25 325 8.81e-77 239
Msa0935790 AT2G34060.1 36.283 339 196 5 12 331 5 342 1.84e-70 223
Msa0935790 AT3G17070.1 38.095 336 193 8 9 335 10 339 2.12e-70 223
Msa0935790 AT5G51890.1 40.705 312 171 8 22 328 13 315 7.80e-70 221
Msa0935790 AT5G17820.1 40.000 325 172 9 14 335 9 313 1.33e-69 220
Msa0935790 AT4G33420.1 37.771 323 185 6 15 335 17 325 4.63e-69 219
Msa0935790 AT4G33420.2 37.771 323 185 6 15 335 64 372 1.26e-68 219
Msa0935790 AT5G17820.2 40.061 327 169 9 14 335 62 366 1.33e-68 219
Msa0935790 AT4G36430.1 38.889 306 179 6 34 335 29 330 9.21e-67 213
Msa0935790 AT5G66390.1 40.532 301 171 6 39 335 37 333 1.94e-66 213
Msa0935790 AT1G05260.1 37.072 321 190 8 19 335 13 325 1.99e-66 212
Msa0935790 AT4G11290.1 37.730 326 192 8 16 335 6 326 4.19e-65 209
Msa0935790 AT5G05340.1 36.774 310 178 5 32 335 27 324 1.23e-64 207
Msa0935790 AT4G16270.1 38.636 308 175 9 35 335 48 348 1.69e-64 208
Msa0935790 AT2G22420.1 36.778 329 190 8 14 335 2 319 2.20e-64 207
Msa0935790 AT2G18150.1 37.209 301 181 6 39 335 40 336 9.23e-64 206
Msa0935790 AT4G31760.1 35.890 326 195 6 14 335 11 326 9.59e-64 205
Msa0935790 AT5G19880.1 38.730 315 179 6 30 335 20 329 1.01e-63 205
Msa0935790 AT2G18140.1 36.061 330 198 7 15 335 10 335 1.25e-63 205
Msa0935790 AT3G50990.1 36.070 341 205 7 4 335 5 341 3.48e-63 204
Msa0935790 AT2G24800.1 36.808 307 184 4 33 335 29 329 1.39e-62 202
Msa0935790 AT1G71695.1 35.465 344 203 6 5 335 2 339 7.37e-62 201
Msa0935790 AT4G21960.1 37.785 307 183 4 31 335 27 327 1.59e-61 199
Msa0935790 AT3G21770.1 37.179 312 187 7 24 331 18 324 2.35e-61 199
Msa0935790 AT4G08770.1 38.486 317 184 8 26 335 15 327 2.80e-61 199
Msa0935790 AT2G37130.1 36.013 311 190 5 28 335 23 327 8.31e-61 197
Msa0935790 AT2G37130.2 36.755 302 182 5 37 335 1 296 2.63e-60 195
Msa0935790 AT2G38380.1 36.452 310 189 6 31 335 27 333 6.31e-60 196
Msa0935790 AT5G42180.1 35.385 325 192 9 15 334 5 316 1.06e-59 194
Msa0935790 AT1G14540.1 34.783 322 201 6 16 335 1 315 1.19e-59 194
Msa0935790 AT1G30870.1 39.739 307 167 10 35 335 51 345 1.69e-59 195
Msa0935790 AT4G08780.1 38.095 315 184 8 28 335 17 327 2.02e-59 194
Msa0935790 AT1G05240.1 38.487 304 172 8 35 331 26 321 3.90e-59 193
Msa0935790 AT1G05250.1 38.487 304 172 8 35 331 26 321 3.90e-59 193
Msa0935790 AT2G35380.1 38.762 307 173 7 39 335 34 335 5.05e-59 193
Msa0935790 AT5G06730.1 35.329 334 205 7 10 335 4 334 7.04e-59 194
Msa0935790 AT3G03670.1 35.736 333 192 7 10 335 4 321 7.73e-59 192
Msa0935790 AT2G38390.1 37.299 311 185 7 31 335 27 333 1.07e-58 193
Msa0935790 AT1G68850.1 36.422 313 180 9 35 335 30 335 1.52e-58 192
Msa0935790 AT5G06720.1 37.299 311 184 8 31 335 28 333 1.92e-58 192
Msa0935790 AT3G01190.1 36.137 321 188 8 21 335 12 321 1.34e-57 189
Msa0935790 AT3G32980.1 35.220 318 197 6 24 335 20 334 1.35e-57 190
Msa0935790 AT5G58390.1 34.043 329 196 7 15 335 1 316 3.26e-57 188
Msa0935790 AT1G14550.1 35.385 325 199 7 14 335 5 321 4.69e-57 188
Msa0935790 AT3G49120.1 34.906 318 198 6 24 335 21 335 6.38e-57 188
Msa0935790 AT5G64110.1 37.417 302 175 7 39 335 38 330 6.73e-57 187
Msa0935790 AT5G58400.1 35.370 311 184 7 31 335 26 325 2.84e-56 186
Msa0935790 AT5G64120.1 35.526 304 187 6 33 335 33 328 6.64e-56 185
Msa0935790 AT4G33870.1 33.143 350 195 5 21 334 54 400 1.29e-55 186
Msa0935790 AT3G49110.1 34.591 318 199 6 24 335 22 336 3.99e-55 184
Msa0935790 AT2G39040.1 38.019 313 180 9 32 335 43 350 5.40e-55 183
Msa0935790 AT5G39580.1 38.158 304 172 8 37 335 27 319 7.47e-55 182
Msa0935790 AT3G17070.2 39.464 261 146 6 82 335 21 276 1.43e-54 180
Msa0935790 AT5G15180.1 34.627 335 197 9 13 335 5 329 6.97e-54 180
Msa0935790 AT1G34510.1 35.692 325 190 8 13 335 2 309 8.86e-54 179
Msa0935790 AT1G44970.1 34.936 312 186 7 33 335 43 346 1.08e-53 180
Msa0935790 AT4G26010.2 33.233 331 204 8 6 335 23 337 1.25e-53 179
Msa0935790 AT4G26010.1 33.642 324 198 8 13 335 2 309 1.46e-53 178
Msa0935790 AT1G49570.1 34.754 305 189 5 33 331 46 346 4.36e-53 178
Msa0935790 AT5G19890.1 34.405 311 187 9 32 335 27 327 1.05e-50 171
Msa0935790 AT4G25980.1 33.033 333 193 10 14 335 13 326 1.74e-50 171
Msa0935790 AT2G41480.1 34.146 328 195 8 18 335 12 328 2.53e-49 168
Msa0935790 AT2G43480.1 35.671 328 195 8 16 335 16 335 6.56e-49 167
Msa0935790 AT5G64100.1 35.526 304 180 8 37 335 39 331 8.34e-49 167
Msa0935790 AT5G24070.1 35.484 310 184 7 34 335 34 335 3.24e-48 165
Msa0935790 AT5G22410.1 34.539 304 184 9 34 331 27 321 1.14e-47 164
Msa0935790 AT1G77100.1 33.533 334 196 11 11 335 3 319 6.99e-45 156
Msa0935790 AT2G35380.2 38.627 233 132 4 112 335 17 247 5.14e-43 149
Msa0935790 AT2G24800.2 39.412 170 97 3 33 202 29 192 4.13e-33 123
Msa0935790 AT4G25980.2 34.615 182 111 5 24 204 60 234 3.00e-28 111
Msa0935790 AT5G39580.2 37.640 178 104 4 37 214 27 197 6.17e-27 106
Msa0935790 AT4G32320.1 26.786 280 136 7 45 314 99 319 2.38e-17 82.0
Msa0935790 AT4G08390.3 29.648 199 111 4 130 320 185 362 8.03e-16 78.2
Msa0935790 AT4G08390.2 29.648 199 111 4 130 320 186 363 8.88e-16 77.8
Msa0935790 AT4G08390.5 29.648 199 111 4 130 320 186 363 8.88e-16 77.8
Msa0935790 AT4G08390.1 29.648 199 111 4 130 320 186 363 8.88e-16 77.8
Msa0935790 AT3G42570.1 41.935 93 53 1 113 204 57 149 9.32e-16 73.9
Msa0935790 AT3G09640.2 26.761 213 113 6 110 318 73 246 7.39e-14 70.9
Msa0935790 AT3G09640.1 26.761 213 113 6 110 318 73 246 7.39e-14 70.9
Msa0935790 AT1G07890.2 29.744 195 94 6 129 318 90 246 8.43e-14 70.9
Msa0935790 AT1G07890.8 29.744 195 94 6 129 318 90 246 8.43e-14 70.9
Msa0935790 AT1G07890.4 29.744 195 94 6 129 318 90 246 8.43e-14 70.9
Msa0935790 AT1G07890.7 29.744 195 94 6 129 318 90 246 8.43e-14 70.9
Msa0935790 AT1G07890.1 29.744 195 94 6 129 318 90 246 8.43e-14 70.9
Msa0935790 AT1G07890.3 29.744 195 94 6 129 318 90 246 8.43e-14 70.9
Msa0935790 AT1G07890.5 29.744 195 94 6 129 318 90 246 8.43e-14 70.9
Msa0935790 AT1G07890.6 29.744 195 94 6 129 318 90 246 9.34e-14 70.5

Find 67 sgRNAs with CRISPR-Local

Find 172 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGATCAAGATTATTTCTTTA+AGG 0.143575 6_3:+6396324 Msa0935790:CDS
CAGAATTTACCTAAAGGTTT+AGG 0.165196 6_3:+6396232 Msa0935790:CDS
TAAACATTATCAAACTTATT+TGG 0.189105 6_3:-6396205 None:intergenic
AGAATTTACCTAAAGGTTTA+GGG 0.281875 6_3:+6396233 Msa0935790:CDS
TACAACAATTCTTCTGGTTC+TGG 0.286642 6_3:+6396085 Msa0935790:CDS
TTTAACCCTTCAACAAATCT+TGG 0.291351 6_3:-6396121 None:intergenic
GAAGAAATGGTTGCTTTATC+TGG 0.318442 6_3:+6396013 Msa0935790:CDS
GATATTTACAACAATTCTTC+TGG 0.318776 6_3:+6396079 Msa0935790:CDS
TGTTTGTTTGTAGTAATCTA+AGG 0.321314 6_3:-6395537 None:intergenic
TTCAAAACCCCTAAACCTTT+AGG 0.324224 6_3:-6396241 None:intergenic
AGTTTCAATATTCGCGAAAC+GGG 0.324305 6_3:+6395979 Msa0935790:CDS
CACGTTCAGCTTTGTTGAAA+GGG 0.328180 6_3:-6395706 None:intergenic
AATTCTTCTGGTTCTGGTTC+AGG 0.343705 6_3:+6396091 Msa0935790:CDS
GACATCAACCTCTCTCTTCC+AGG 0.344076 6_3:+6395734 Msa0935790:CDS
GTCATTGTCATCGACGGCTT+TGG 0.349992 6_3:-6395950 None:intergenic
ACGGAGAGTGGCGGCGGCGG+TGG 0.370801 6_3:-6395621 None:intergenic
CGGCGGCGGTGGTTGGAGAT+TGG 0.376609 6_3:-6395610 None:intergenic
GAGACGGAGAGTGGCGGCGG+CGG 0.421113 6_3:-6395624 None:intergenic
AGAGTGGCGGCGGCGGTGGT+TGG 0.426793 6_3:-6395617 None:intergenic
GTTAGGACAGGAGAGTTCTA+AGG 0.433270 6_3:-6395792 None:intergenic
TCAGAGCAAGAGACAGTGTT+AGG 0.434139 6_3:-6395809 None:intergenic
GAAGAGACGGAGAGTGGCGG+CGG 0.442594 6_3:-6395627 None:intergenic
TTATCTGGTGCTCATACAGT+TGG 0.446715 6_3:+6396028 Msa0935790:CDS
TCCACAAAAGGTTTAGTTGA+AGG 0.448447 6_3:-6396289 None:intergenic
TCACGTTCAGCTTTGTTGAA+AGG 0.455448 6_3:-6395707 None:intergenic
CGTCGCAGCCGTTAGGGAGG+AGG 0.467163 6_3:-6395661 None:intergenic
ACGGAGGCGTCGCAGCCGTT+AGG 0.473671 6_3:-6395668 None:intergenic
CGTGATCTTCTTATCATGCT+TGG 0.474261 6_3:+6395851 Msa0935790:CDS
TTAGCAAATCTATCCACAAA+AGG 0.474475 6_3:-6396301 None:intergenic
AGGGGTTGAAGAGAGGAGGA+CGG 0.478008 6_3:-6395687 None:intergenic
TGTTGAAAGGGGTTGAAGAG+AGG 0.484577 6_3:-6395694 None:intergenic
GATTAGAAGAAGATGTGATC+AGG 0.486639 6_3:+6396408 Msa0935790:CDS
CGGAGGCGTCGCAGCCGTTA+GGG 0.497652 6_3:-6395667 None:intergenic
TCTGTGTCATCTGCCGTTGA+CGG 0.502316 6_3:+6395920 Msa0935790:CDS
CCACAAAAGGTTTAGTTGAA+GGG 0.502538 6_3:-6396288 None:intergenic
TATAATCCAAGATTTGTTGA+AGG 0.505931 6_3:+6396115 Msa0935790:CDS
GCAAGAGACAGTGTTAGGAC+AGG 0.508508 6_3:-6395804 None:intergenic
TGAATGATTTGTTCGAATTG+TGG 0.511315 6_3:-6395563 None:intergenic
TAGTTTCAATATTCGCGAAA+CGG 0.511725 6_3:+6395978 Msa0935790:CDS
ATGAGGTCAAAGGAGTCTCC+TGG 0.515886 6_3:-6395752 None:intergenic
GGCAGTCGTGGAGGAAGAGA+CGG 0.531026 6_3:-6395640 None:intergenic
GAATGTTCAGACTGGTAGGA+AGG 0.531795 6_3:+6396381 Msa0935790:CDS
ATAATCCAAGATTTGTTGAA+GGG 0.533288 6_3:+6396116 Msa0935790:CDS
TGAAAGGGGTTGAAGAGAGG+AGG 0.534695 6_3:-6395691 None:intergenic
GATCTTCTTATCATGCTTGG+TGG 0.554628 6_3:+6395854 Msa0935790:CDS
CGTTAGGGAGGAGGCAGTCG+TGG 0.559904 6_3:-6395652 None:intergenic
CCTCATTACAATGTTTACCT+AGG 0.560603 6_3:+6395878 Msa0935790:CDS
ATCTGTGTCATTGTCATCGA+CGG 0.571963 6_3:-6395956 None:intergenic
ACGTTCAGCTTTGTTGAAAG+GGG 0.574965 6_3:-6395705 None:intergenic
GATACGTACGATGAGGTCAA+AGG 0.582070 6_3:-6395762 None:intergenic
CACGACTGCCTCCTCCCTAA+CGG 0.589429 6_3:+6395653 Msa0935790:CDS
AATGTTCAGACTGGTAGGAA+GGG 0.612530 6_3:+6396382 Msa0935790:CDS
GAATTTACCTAAAGGTTTAG+GGG 0.612906 6_3:+6396234 Msa0935790:CDS
CTTTGGAAGAAAGCCGTCAA+CGG 0.615992 6_3:-6395933 None:intergenic
AGGCGTCGCAGCCGTTAGGG+AGG 0.621783 6_3:-6395664 None:intergenic
GTGGAGGAAGAGACGGAGAG+TGG 0.623125 6_3:-6395633 None:intergenic
AGGAGTCTCCTGGAAGAGAG+AGG 0.623254 6_3:-6395742 None:intergenic
GTTTCAATATTCGCGAAACG+GGG 0.630647 6_3:+6395980 Msa0935790:CDS
GGTTGAAGAGAGGAGGACGG+AGG 0.631104 6_3:-6395684 None:intergenic
GAGGAAGAGACGGAGAGTGG+CGG 0.632804 6_3:-6395630 None:intergenic
TAGGGAGGAGGCAGTCGTGG+AGG 0.639200 6_3:-6395649 None:intergenic
CGGCAGATGACACAGAACCT+CGG 0.640173 6_3:-6395913 None:intergenic
GTTTACCTAGGCCGTCGCGA+CGG 0.641782 6_3:+6395890 Msa0935790:CDS
AGGACAGGAGAGTTCTAAGG+CGG 0.642727 6_3:-6395789 None:intergenic
CCTAGGTAAACATTGTAATG+AGG 0.645276 6_3:-6395878 None:intergenic
GATCACGTGTAGCTGTAGCA+AGG 0.646540 6_3:-6395835 None:intergenic
GAAGGGTTAAAGAAAGCTTG+TGG 0.742356 6_3:+6396133 Msa0935790:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAACATTATCAAACTTATT+TGG - chr6_3:6396208-6396227 None:intergenic 15.0%
!! TAAACATTATCAAACTTATT+TGG - chr6_3:6396208-6396227 None:intergenic 15.0%
!!! TATTTTCAGAATTTACCTAA+AGG + chr6_3:6396226-6396245 Msa0935790:CDS 20.0%
!!! TATTTTCAGAATTTACCTAA+AGG + chr6_3:6396226-6396245 Msa0935790:CDS 20.0%
!!! ATCTAAGGTTAGTTTTGATT+CGG - chr6_3:6395525-6395544 None:intergenic 25.0%
! TGTTTGTTTGTAGTAATCTA+AGG - chr6_3:6395540-6395559 None:intergenic 25.0%
! GATATTTACAACAATTCTTC+TGG + chr6_3:6396079-6396098 Msa0935790:CDS 25.0%
!!! TATAATCCAAGATTTGTTGA+AGG + chr6_3:6396115-6396134 Msa0935790:CDS 25.0%
!!! ATAATCCAAGATTTGTTGAA+GGG + chr6_3:6396116-6396135 Msa0935790:CDS 25.0%
! TCATTAAAAACAGACAAAGT+TGG - chr6_3:6396175-6396194 None:intergenic 25.0%
! AGAATTTACCTAAAGGTTTA+GGG + chr6_3:6396233-6396252 Msa0935790:CDS 25.0%
!! GGATCAAGATTATTTCTTTA+AGG + chr6_3:6396324-6396343 Msa0935790:CDS 25.0%
!!! ATCTAAGGTTAGTTTTGATT+CGG - chr6_3:6395525-6395544 None:intergenic 25.0%
! TGTTTGTTTGTAGTAATCTA+AGG - chr6_3:6395540-6395559 None:intergenic 25.0%
! GATATTTACAACAATTCTTC+TGG + chr6_3:6396079-6396098 Msa0935790:CDS 25.0%
!!! TATAATCCAAGATTTGTTGA+AGG + chr6_3:6396115-6396134 Msa0935790:CDS 25.0%
!!! ATAATCCAAGATTTGTTGAA+GGG + chr6_3:6396116-6396135 Msa0935790:CDS 25.0%
! TCATTAAAAACAGACAAAGT+TGG - chr6_3:6396175-6396194 None:intergenic 25.0%
! AGAATTTACCTAAAGGTTTA+GGG + chr6_3:6396233-6396252 Msa0935790:CDS 25.0%
!! GGATCAAGATTATTTCTTTA+AGG + chr6_3:6396324-6396343 Msa0935790:CDS 25.0%
!! CAATGTTTTTGATGTTGTTG+AGG - chr6_3:6395456-6395475 None:intergenic 30.0%
!! TGAATGATTTGTTCGAATTG+TGG - chr6_3:6395566-6395585 None:intergenic 30.0%
TAGTTTCAATATTCGCGAAA+CGG + chr6_3:6395978-6395997 Msa0935790:CDS 30.0%
TTTAACCCTTCAACAAATCT+TGG - chr6_3:6396124-6396143 None:intergenic 30.0%
CAGAATTTACCTAAAGGTTT+AGG + chr6_3:6396232-6396251 Msa0935790:CDS 30.0%
GAATTTACCTAAAGGTTTAG+GGG + chr6_3:6396234-6396253 Msa0935790:CDS 30.0%
TTAGCAAATCTATCCACAAA+AGG - chr6_3:6396304-6396323 None:intergenic 30.0%
!!! TTTTGTGGATAGATTTGCTA+AGG + chr6_3:6396303-6396322 Msa0935790:CDS 30.0%
!! CAATGTTTTTGATGTTGTTG+AGG - chr6_3:6395456-6395475 None:intergenic 30.0%
!! TGAATGATTTGTTCGAATTG+TGG - chr6_3:6395566-6395585 None:intergenic 30.0%
TAGTTTCAATATTCGCGAAA+CGG + chr6_3:6395978-6395997 Msa0935790:CDS 30.0%
TTTAACCCTTCAACAAATCT+TGG - chr6_3:6396124-6396143 None:intergenic 30.0%
CAGAATTTACCTAAAGGTTT+AGG + chr6_3:6396232-6396251 Msa0935790:CDS 30.0%
GAATTTACCTAAAGGTTTAG+GGG + chr6_3:6396234-6396253 Msa0935790:CDS 30.0%
TTAGCAAATCTATCCACAAA+AGG - chr6_3:6396304-6396323 None:intergenic 30.0%
!!! TTTTGTGGATAGATTTGCTA+AGG + chr6_3:6396303-6396322 Msa0935790:CDS 30.0%
CCTAGGTAAACATTGTAATG+AGG - chr6_3:6395881-6395900 None:intergenic 35.0%
CCTCATTACAATGTTTACCT+AGG + chr6_3:6395878-6395897 Msa0935790:CDS 35.0%
AGTTTCAATATTCGCGAAAC+GGG + chr6_3:6395979-6395998 Msa0935790:CDS 35.0%
! GAAGAAATGGTTGCTTTATC+TGG + chr6_3:6396013-6396032 Msa0935790:CDS 35.0%
!! TACAACAATTCTTCTGGTTC+TGG + chr6_3:6396085-6396104 Msa0935790:CDS 35.0%
TTCAAAACCCCTAAACCTTT+AGG - chr6_3:6396244-6396263 None:intergenic 35.0%
!!! GGGTTTTGAAATCTGATCAT+GGG + chr6_3:6396254-6396273 Msa0935790:CDS 35.0%
CCACAAAAGGTTTAGTTGAA+GGG - chr6_3:6396291-6396310 None:intergenic 35.0%
TCCACAAAAGGTTTAGTTGA+AGG - chr6_3:6396292-6396311 None:intergenic 35.0%
! AGTCTTTTGAATGTTCAGAC+TGG + chr6_3:6396373-6396392 Msa0935790:CDS 35.0%
! TTTTGAATGTTCAGACTGGT+AGG + chr6_3:6396377-6396396 Msa0935790:CDS 35.0%
GATTAGAAGAAGATGTGATC+AGG + chr6_3:6396408-6396427 Msa0935790:CDS 35.0%
CCTAGGTAAACATTGTAATG+AGG - chr6_3:6395881-6395900 None:intergenic 35.0%
CCTCATTACAATGTTTACCT+AGG + chr6_3:6395878-6395897 Msa0935790:CDS 35.0%
AGTTTCAATATTCGCGAAAC+GGG + chr6_3:6395979-6395998 Msa0935790:CDS 35.0%
! GAAGAAATGGTTGCTTTATC+TGG + chr6_3:6396013-6396032 Msa0935790:CDS 35.0%
!! TACAACAATTCTTCTGGTTC+TGG + chr6_3:6396085-6396104 Msa0935790:CDS 35.0%
TTCAAAACCCCTAAACCTTT+AGG - chr6_3:6396244-6396263 None:intergenic 35.0%
!!! GGGTTTTGAAATCTGATCAT+GGG + chr6_3:6396254-6396273 Msa0935790:CDS 35.0%
CCACAAAAGGTTTAGTTGAA+GGG - chr6_3:6396291-6396310 None:intergenic 35.0%
TCCACAAAAGGTTTAGTTGA+AGG - chr6_3:6396292-6396311 None:intergenic 35.0%
! AGTCTTTTGAATGTTCAGAC+TGG + chr6_3:6396373-6396392 Msa0935790:CDS 35.0%
! TTTTGAATGTTCAGACTGGT+AGG + chr6_3:6396377-6396396 Msa0935790:CDS 35.0%
GATTAGAAGAAGATGTGATC+AGG + chr6_3:6396408-6396427 Msa0935790:CDS 35.0%
!!! GTTTTGATTCGGAGAGGTTA+AGG - chr6_3:6395514-6395533 None:intergenic 40.0%
!!! AGGTTAGTTTTGATTCGGAG+AGG - chr6_3:6395520-6395539 None:intergenic 40.0%
! TGGAGATTGGATCTGTTTTG+AGG - chr6_3:6395600-6395619 None:intergenic 40.0%
!! ACGTTCAGCTTTGTTGAAAG+GGG - chr6_3:6395708-6395727 None:intergenic 40.0%
!! CACGTTCAGCTTTGTTGAAA+GGG - chr6_3:6395709-6395728 None:intergenic 40.0%
!! TCACGTTCAGCTTTGTTGAA+AGG - chr6_3:6395710-6395729 None:intergenic 40.0%
CGTGATCTTCTTATCATGCT+TGG + chr6_3:6395851-6395870 Msa0935790:CDS 40.0%
GATCTTCTTATCATGCTTGG+TGG + chr6_3:6395854-6395873 Msa0935790:CDS 40.0%
! ATCTGTGTCATTGTCATCGA+CGG - chr6_3:6395959-6395978 None:intergenic 40.0%
GTTTCAATATTCGCGAAACG+GGG + chr6_3:6395980-6395999 Msa0935790:CDS 40.0%
! GGGTTTTACGGTTGAAGAAA+TGG + chr6_3:6396000-6396019 Msa0935790:CDS 40.0%
TTATCTGGTGCTCATACAGT+TGG + chr6_3:6396028-6396047 Msa0935790:CDS 40.0%
!! AATTCTTCTGGTTCTGGTTC+AGG + chr6_3:6396091-6396110 Msa0935790:CDS 40.0%
GAAGGGTTAAAGAAAGCTTG+TGG + chr6_3:6396133-6396152 Msa0935790:CDS 40.0%
!!! GGGGTTTTGAAATCTGATCA+TGG + chr6_3:6396253-6396272 Msa0935790:CDS 40.0%
! CCCTTCAACTAAACCTTTTG+TGG + chr6_3:6396288-6396307 Msa0935790:CDS 40.0%
AATGTTCAGACTGGTAGGAA+GGG + chr6_3:6396382-6396401 Msa0935790:CDS 40.0%
!!! GTTTTGATTCGGAGAGGTTA+AGG - chr6_3:6395514-6395533 None:intergenic 40.0%
!!! AGGTTAGTTTTGATTCGGAG+AGG - chr6_3:6395520-6395539 None:intergenic 40.0%
! TGGAGATTGGATCTGTTTTG+AGG - chr6_3:6395600-6395619 None:intergenic 40.0%
!! ACGTTCAGCTTTGTTGAAAG+GGG - chr6_3:6395708-6395727 None:intergenic 40.0%
!! CACGTTCAGCTTTGTTGAAA+GGG - chr6_3:6395709-6395728 None:intergenic 40.0%
!! TCACGTTCAGCTTTGTTGAA+AGG - chr6_3:6395710-6395729 None:intergenic 40.0%
CGTGATCTTCTTATCATGCT+TGG + chr6_3:6395851-6395870 Msa0935790:CDS 40.0%
GATCTTCTTATCATGCTTGG+TGG + chr6_3:6395854-6395873 Msa0935790:CDS 40.0%
! ATCTGTGTCATTGTCATCGA+CGG - chr6_3:6395959-6395978 None:intergenic 40.0%
GTTTCAATATTCGCGAAACG+GGG + chr6_3:6395980-6395999 Msa0935790:CDS 40.0%
! GGGTTTTACGGTTGAAGAAA+TGG + chr6_3:6396000-6396019 Msa0935790:CDS 40.0%
TTATCTGGTGCTCATACAGT+TGG + chr6_3:6396028-6396047 Msa0935790:CDS 40.0%
!! AATTCTTCTGGTTCTGGTTC+AGG + chr6_3:6396091-6396110 Msa0935790:CDS 40.0%
GAAGGGTTAAAGAAAGCTTG+TGG + chr6_3:6396133-6396152 Msa0935790:CDS 40.0%
!!! GGGGTTTTGAAATCTGATCA+TGG + chr6_3:6396253-6396272 Msa0935790:CDS 40.0%
! CCCTTCAACTAAACCTTTTG+TGG + chr6_3:6396288-6396307 Msa0935790:CDS 40.0%
AATGTTCAGACTGGTAGGAA+GGG + chr6_3:6396382-6396401 Msa0935790:CDS 40.0%
TGTTGAAAGGGGTTGAAGAG+AGG - chr6_3:6395697-6395716 None:intergenic 45.0%
GATACGTACGATGAGGTCAA+AGG - chr6_3:6395765-6395784 None:intergenic 45.0%
!! CGGTTTTGATACGTACGATG+AGG - chr6_3:6395772-6395791 None:intergenic 45.0%
GTTAGGACAGGAGAGTTCTA+AGG - chr6_3:6395795-6395814 None:intergenic 45.0%
TCAGAGCAAGAGACAGTGTT+AGG - chr6_3:6395812-6395831 None:intergenic 45.0%
! CTTTGGAAGAAAGCCGTCAA+CGG - chr6_3:6395936-6395955 None:intergenic 45.0%
! ATTCGCGAAACGGGGTTTTA+CGG + chr6_3:6395988-6396007 Msa0935790:CDS 45.0%
GAATGTTCAGACTGGTAGGA+AGG + chr6_3:6396381-6396400 Msa0935790:CDS 45.0%
TGTTGAAAGGGGTTGAAGAG+AGG - chr6_3:6395697-6395716 None:intergenic 45.0%
GATACGTACGATGAGGTCAA+AGG - chr6_3:6395765-6395784 None:intergenic 45.0%
!! CGGTTTTGATACGTACGATG+AGG - chr6_3:6395772-6395791 None:intergenic 45.0%
GTTAGGACAGGAGAGTTCTA+AGG - chr6_3:6395795-6395814 None:intergenic 45.0%
TCAGAGCAAGAGACAGTGTT+AGG - chr6_3:6395812-6395831 None:intergenic 45.0%
! CTTTGGAAGAAAGCCGTCAA+CGG - chr6_3:6395936-6395955 None:intergenic 45.0%
! ATTCGCGAAACGGGGTTTTA+CGG + chr6_3:6395988-6396007 Msa0935790:CDS 45.0%
GAATGTTCAGACTGGTAGGA+AGG + chr6_3:6396381-6396400 Msa0935790:CDS 45.0%
TGAAAGGGGTTGAAGAGAGG+AGG - chr6_3:6395694-6395713 None:intergenic 50.0%
GACATCAACCTCTCTCTTCC+AGG + chr6_3:6395734-6395753 Msa0935790:CDS 50.0%
ATGAGGTCAAAGGAGTCTCC+TGG - chr6_3:6395755-6395774 None:intergenic 50.0%
!! AGGACAGGAGAGTTCTAAGG+CGG - chr6_3:6395792-6395811 None:intergenic 50.0%
GCAAGAGACAGTGTTAGGAC+AGG - chr6_3:6395807-6395826 None:intergenic 50.0%
GATCACGTGTAGCTGTAGCA+AGG - chr6_3:6395838-6395857 None:intergenic 50.0%
TCTGTGTCATCTGCCGTTGA+CGG + chr6_3:6395920-6395939 Msa0935790:CDS 50.0%
GTCATTGTCATCGACGGCTT+TGG - chr6_3:6395953-6395972 None:intergenic 50.0%
TGAAAGGGGTTGAAGAGAGG+AGG - chr6_3:6395694-6395713 None:intergenic 50.0%
GACATCAACCTCTCTCTTCC+AGG + chr6_3:6395734-6395753 Msa0935790:CDS 50.0%
ATGAGGTCAAAGGAGTCTCC+TGG - chr6_3:6395755-6395774 None:intergenic 50.0%
!! AGGACAGGAGAGTTCTAAGG+CGG - chr6_3:6395792-6395811 None:intergenic 50.0%
GCAAGAGACAGTGTTAGGAC+AGG - chr6_3:6395807-6395826 None:intergenic 50.0%
GATCACGTGTAGCTGTAGCA+AGG - chr6_3:6395838-6395857 None:intergenic 50.0%
TCTGTGTCATCTGCCGTTGA+CGG + chr6_3:6395920-6395939 Msa0935790:CDS 50.0%
GTCATTGTCATCGACGGCTT+TGG - chr6_3:6395953-6395972 None:intergenic 50.0%
AGGGGTTGAAGAGAGGAGGA+CGG - chr6_3:6395690-6395709 None:intergenic 55.0%
AGGAGTCTCCTGGAAGAGAG+AGG - chr6_3:6395745-6395764 None:intergenic 55.0%
CGGCAGATGACACAGAACCT+CGG - chr6_3:6395916-6395935 None:intergenic 55.0%
AGGGGTTGAAGAGAGGAGGA+CGG - chr6_3:6395690-6395709 None:intergenic 55.0%
AGGAGTCTCCTGGAAGAGAG+AGG - chr6_3:6395745-6395764 None:intergenic 55.0%
CGGCAGATGACACAGAACCT+CGG - chr6_3:6395916-6395935 None:intergenic 55.0%
GAGGAAGAGACGGAGAGTGG+CGG - chr6_3:6395633-6395652 None:intergenic 60.0%
GTGGAGGAAGAGACGGAGAG+TGG - chr6_3:6395636-6395655 None:intergenic 60.0%
GGCAGTCGTGGAGGAAGAGA+CGG - chr6_3:6395643-6395662 None:intergenic 60.0%
CACGACTGCCTCCTCCCTAA+CGG + chr6_3:6395653-6395672 Msa0935790:CDS 60.0%
GGTTGAAGAGAGGAGGACGG+AGG - chr6_3:6395687-6395706 None:intergenic 60.0%
GTTTACCTAGGCCGTCGCGA+CGG + chr6_3:6395890-6395909 Msa0935790:CDS 60.0%
GAGGAAGAGACGGAGAGTGG+CGG - chr6_3:6395633-6395652 None:intergenic 60.0%
GTGGAGGAAGAGACGGAGAG+TGG - chr6_3:6395636-6395655 None:intergenic 60.0%
GGCAGTCGTGGAGGAAGAGA+CGG - chr6_3:6395643-6395662 None:intergenic 60.0%
CACGACTGCCTCCTCCCTAA+CGG + chr6_3:6395653-6395672 Msa0935790:CDS 60.0%
GGTTGAAGAGAGGAGGACGG+AGG - chr6_3:6395687-6395706 None:intergenic 60.0%
GTTTACCTAGGCCGTCGCGA+CGG + chr6_3:6395890-6395909 Msa0935790:CDS 60.0%
GAAGAGACGGAGAGTGGCGG+CGG - chr6_3:6395630-6395649 None:intergenic 65.0%
TAGGGAGGAGGCAGTCGTGG+AGG - chr6_3:6395652-6395671 None:intergenic 65.0%
CGTTAGGGAGGAGGCAGTCG+TGG - chr6_3:6395655-6395674 None:intergenic 65.0%
GAAGAGACGGAGAGTGGCGG+CGG - chr6_3:6395630-6395649 None:intergenic 65.0%
TAGGGAGGAGGCAGTCGTGG+AGG - chr6_3:6395652-6395671 None:intergenic 65.0%
CGTTAGGGAGGAGGCAGTCG+TGG - chr6_3:6395655-6395674 None:intergenic 65.0%
CGGCGGCGGTGGTTGGAGAT+TGG - chr6_3:6395613-6395632 None:intergenic 70.0%
CGTCGCAGCCGTTAGGGAGG+AGG - chr6_3:6395664-6395683 None:intergenic 70.0%
! AGGCGTCGCAGCCGTTAGGG+AGG - chr6_3:6395667-6395686 None:intergenic 70.0%
!! CGGAGGCGTCGCAGCCGTTA+GGG - chr6_3:6395670-6395689 None:intergenic 70.0%
!! ACGGAGGCGTCGCAGCCGTT+AGG - chr6_3:6395671-6395690 None:intergenic 70.0%
CAGAACCTCGGCCGTCGCGA+CGG - chr6_3:6395904-6395923 None:intergenic 70.0%
CGGCGGCGGTGGTTGGAGAT+TGG - chr6_3:6395613-6395632 None:intergenic 70.0%
CGTCGCAGCCGTTAGGGAGG+AGG - chr6_3:6395664-6395683 None:intergenic 70.0%
! AGGCGTCGCAGCCGTTAGGG+AGG - chr6_3:6395667-6395686 None:intergenic 70.0%
!! CGGAGGCGTCGCAGCCGTTA+GGG - chr6_3:6395670-6395689 None:intergenic 70.0%
!! ACGGAGGCGTCGCAGCCGTT+AGG - chr6_3:6395671-6395690 None:intergenic 70.0%
CAGAACCTCGGCCGTCGCGA+CGG - chr6_3:6395904-6395923 None:intergenic 70.0%
AGAGTGGCGGCGGCGGTGGT+TGG - chr6_3:6395620-6395639 None:intergenic 75.0%
GAGACGGAGAGTGGCGGCGG+CGG - chr6_3:6395627-6395646 None:intergenic 75.0%
AGAGTGGCGGCGGCGGTGGT+TGG - chr6_3:6395620-6395639 None:intergenic 75.0%
GAGACGGAGAGTGGCGGCGG+CGG - chr6_3:6395627-6395646 None:intergenic 75.0%
! ACGGAGAGTGGCGGCGGCGG+TGG - chr6_3:6395624-6395643 None:intergenic 80.0%
! CTCGGCCGTCGCGACGGCCT+AGG - chr6_3:6395898-6395917 None:intergenic 80.0%
! CTAGGCCGTCGCGACGGCCG+AGG + chr6_3:6395896-6395915 Msa0935790:CDS 80.0%
! ACGGAGAGTGGCGGCGGCGG+TGG - chr6_3:6395624-6395643 None:intergenic 80.0%
! CTCGGCCGTCGCGACGGCCT+AGG - chr6_3:6395898-6395917 None:intergenic 80.0%
! CTAGGCCGTCGCGACGGCCG+AGG + chr6_3:6395896-6395915 Msa0935790:CDS 80.0%
Chromosome Type Strat End Strand Name
chr6_3 gene 6395431 6396438 6395431 ID=Msa0935790;Name=Msa0935790
chr6_3 mRNA 6395431 6396438 6395431 ID=Msa0935790-mRNA-1;Parent=Msa0935790;Name=Msa0935790-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|335
chr6_3 exon 6395431 6396438 6395431 ID=Msa0935790-mRNA-1:exon:2013;Parent=Msa0935790-mRNA-1
chr6_3 CDS 6395431 6396438 6395431 ID=Msa0935790-mRNA-1:cds;Parent=Msa0935790-mRNA-1
Gene Sequence

>Msa0935790

ATGGCAGCAACAACAAAAACAACCTCAACAACATCAAAAACATTGTTGTCATTGTTTTTCTTCTTCAACATCATCATTAACCTTAACCTCTCCGAATCAAAACTAACCTTAGATTACTACAAACAAACATGTCCACAATTCGAACAAATCATTCAACAAACAGTAACCTCAAAACAGATCCAATCTCCAACCACCGCCGCCGCCACTCTCCGTCTCTTCCTCCACGACTGCCTCCTCCCTAACGGCTGCGACGCCTCCGTCCTCCTCTCTTCAACCCCTTTCAACAAAGCTGAACGTGACAACGACATCAACCTCTCTCTTCCAGGAGACTCCTTTGACCTCATCGTACGTATCAAAACCGCCTTAGAACTCTCCTGTCCTAACACTGTCTCTTGCTCTGACATCCTTGCTACAGCTACACGTGATCTTCTTATCATGCTTGGTGGTCCTCATTACAATGTTTACCTAGGCCGTCGCGACGGCCGAGGTTCTGTGTCATCTGCCGTTGACGGCTTTCTTCCAAAGCCGTCGATGACAATGACACAGATAGTTTCAATATTCGCGAAACGGGGTTTTACGGTTGAAGAAATGGTTGCTTTATCTGGTGCTCATACAGTTGGACTTTCACATTGTAGTGAAATTAGTTCAGATATTTACAACAATTCTTCTGGTTCTGGTTCAGGTTATAATCCAAGATTTGTTGAAGGGTTAAAGAAAGCTTGTGGTGATTATAAGAAGAATCCAACTTTGTCTGTTTTTAATGATATTATGACACCAAATAAGTTTGATAATGTTTATTTTCAGAATTTACCTAAAGGTTTAGGGGTTTTGAAATCTGATCATGGGTTGTTTAGTGACCCTTCAACTAAACCTTTTGTGGATAGATTTGCTAAGGATCAAGATTATTTCTTTAAGGTTTTTGCTAGTTCAATGCAAAAGCTTAGTCTTTTGAATGTTCAGACTGGTAGGAAGGGTGAGATTAGAAGAAGATGTGATCAGGTTAATTGA
Protein sequence

>Msa0935790

MAATTKTTSTTSKTLLSLFFFFNIIINLNLSESKLTLDYYKQTCPQFEQIIQQTVTSKQIQSPTTAAATLRLFLHDCLLPNGCDASVLLSSTPFNKAERDNDINLSLPGDSFDLIVRIKTALELSCPNTVSCSDILATATRDLLIMLGGPHYNVYLGRRDGRGSVSSAVDGFLPKPSMTMTQIVSIFAKRGFTVEEMVALSGAHTVGLSHCSEISSDIYNNSSGSGSGYNPRFVEGLKKACGDYKKNPTLSVFNDIMTPNKFDNVYFQNLPKGLGVLKSDHGLFSDPSTKPFVDRFAKDQDYFFKVFASSMQKLSLLNVQTGRKGEIRRRCDQVN*