AlfalfaGEDB | Msa0972820

M. sativa cultivar zhongmu-4 / Msa0972820

KEGG: K00430
GO: GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0009505 GO:0030312 GO:0044424 GO:0044444 GO:0044464 GO:0071944
PFAM: PF00141.26

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0972820	XP_013450882.1	96.396	333	12	0	3	335	2	334	0.0	665

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0972820	sp\|Q9FL16\|PER63_ARATH	64.590	305	104	2	31	335	28	328	6.57e-151	430

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0972820	I3T3G6	96.396	333	12	0	3	335	2	334	0.0	665

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0667070	Msa0972820	0.811847	5.703887e-51	-8.615850e-47
Msa0390090	Msa0972820	0.862438	5.066548e-64	-8.615850e-47
Msa0274950	Msa0972820	0.839037	2.012802e-57	-8.615850e-47
Msa0870090	Msa0972820	0.901233	3.294514e-78	-8.615850e-47
Msa0935790	Msa0972820	0.894976	1.484283e-75	-8.615850e-47
Msa0972820	Msa1204770	0.813025	3.154127e-51	-8.615850e-47
Msa0972820	Msa1320530	0.807102	5.956303e-50	-8.615850e-47
Msa0972820	Msa1329350	0.818055	2.393084e-52	-8.615850e-47
Msa0972820	Msa1329580	0.806224	9.127152e-50	-8.615850e-47
Msa0972820	Msa1341500	0.827443	1.560077e-54	-8.615850e-47
Msa0972820	Msa1379680	0.865981	3.979171e-65	-8.615850e-47
Msa0972820	Msa1412620	0.804084	2.559859e-49	-8.615850e-47
Msa0972820	Msa1457170	0.844781	6.112762e-59	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0972820	MtrunA17_Chr6g0451571	96.396	333	12	0	3	335	2	334	0.0	665
Msa0972820	MtrunA17_Chr8g0364291	52.597	308	143	2	30	335	18	324	9.04e-122	353
Msa0972820	MtrunA17_Chr1g0197411	50.156	321	156	3	18	335	11	330	7.28e-118	343
Msa0972820	MtrunA17_Chr7g0225221	45.066	304	162	4	32	335	22	320	6.06e-91	274
Msa0972820	MtrunA17_Chr1g0148021	43.252	326	176	6	14	335	8	328	2.31e-88	268
Msa0972820	MtrunA17_Chr5g0401431	42.368	321	179	4	15	331	7	325	3.03e-85	260
Msa0972820	MtrunA17_Chr4g0046131	41.908	346	173	11	9	331	2	342	7.17e-82	252
Msa0972820	MtrunA17_Chr1g0204011	44.548	321	164	8	18	335	13	322	7.41e-80	246
Msa0972820	MtrunA17_Chr4g0072091	43.464	306	164	6	34	335	23	323	1.39e-77	240
Msa0972820	MtrunA17_Chr4g0053871	42.525	301	166	4	33	331	25	320	5.22e-77	239
Msa0972820	MtrunA17_Chr1g0188431	37.092	337	194	7	3	335	5	327	1.54e-68	217
Msa0972820	MtrunA17_Chr5g0405991	39.812	319	179	8	21	335	7	316	5.06e-68	216
Msa0972820	MtrunA17_Chr4g0075241	36.335	322	201	3	15	335	9	327	2.07e-67	214
Msa0972820	MtrunA17_Chr8g0371381	40.924	303	168	7	35	335	26	319	1.53e-66	212
Msa0972820	MtrunA17_Chr4g0068621	40.656	305	175	5	33	335	36	336	4.17e-66	211
Msa0972820	MtrunA17_Chr3g0129051	37.615	327	185	6	14	335	10	322	5.10e-66	211
Msa0972820	MtrunA17_Chr1g0164891	40.264	303	172	6	39	335	93	392	6.09e-66	213
Msa0972820	MtrunA17_Chr2g0320091	37.963	324	191	5	14	335	3	318	1.99e-65	209
Msa0972820	MtrunA17_Chr7g0244461	39.297	313	180	5	24	335	9	312	7.38e-65	207
Msa0972820	MtrunA17_Chr4g0074851	37.500	320	188	5	18	335	19	328	7.81e-65	208
Msa0972820	MtrunA17_Chr6g0477071	36.697	327	186	8	15	335	31	342	7.92e-65	208
Msa0972820	MtrunA17_Chr6g0460711	39.252	321	183	6	15	335	6	314	9.14e-65	207
Msa0972820	MtrunA17_Chr3g0114451	36.760	321	191	5	19	335	6	318	1.32e-64	207
Msa0972820	MtrunA17_Chr5g0404721	37.333	300	182	5	39	335	34	330	1.46e-64	207
Msa0972820	MtrunA17_Chr4g0013191	40.667	300	166	6	39	335	50	340	1.84e-64	207
Msa0972820	MtrunA17_Chr7g0254231	39.535	301	171	5	35	335	22	311	3.16e-64	206
Msa0972820	MtrunA17_Chr7g0254201	38.636	308	181	4	28	335	13	312	4.81e-64	205
Msa0972820	MtrunA17_Chr5g0432441	36.607	336	190	9	10	335	4	326	6.87e-64	205
Msa0972820	MtrunA17_Chr2g0292181	39.355	310	179	6	31	335	34	339	9.80e-64	206
Msa0972820	MtrunA17_Chr4g0024121	37.942	311	180	8	31	335	23	326	1.00e-63	205
Msa0972820	MtrunA17_Chr1g0157051	36.842	323	190	9	16	334	5	317	1.11e-63	204
Msa0972820	MtrunA17_Chr4g0013721	38.511	309	178	7	31	335	96	396	2.45e-63	206
Msa0972820	MtrunA17_Chr2g0292241	39.677	310	178	7	31	335	25	330	8.49e-63	203
Msa0972820	MtrunA17_Chr1g0213061	40.952	315	171	9	25	335	18	321	1.21e-62	202
Msa0972820	MtrunA17_Chr5g0400331	38.065	310	179	6	35	335	26	331	1.45e-62	202
Msa0972820	MtrunA17_Chr2g0292251	38.907	311	179	7	31	335	24	329	1.90e-62	202
Msa0972820	MtrunA17_Chr2g0292211	39.032	310	180	6	31	335	36	341	1.98e-62	202
Msa0972820	MtrunA17_Chr7g0268501	39.172	314	175	10	28	335	17	320	2.10e-62	201
Msa0972820	MtrunA17_Chr7g0268521	39.172	314	175	10	28	335	17	320	2.10e-62	201
Msa0972820	MtrunA17_Chr1g0194151	37.838	333	191	8	14	335	6	333	5.07e-62	201
Msa0972820	MtrunA17_Chr2g0292151	39.550	311	177	7	31	335	25	330	5.22e-62	201
Msa0972820	MtrunA17_Chr2g0320071	36.391	327	191	6	14	335	3	317	6.79e-62	200
Msa0972820	MtrunA17_Chr5g0438021	34.663	326	195	5	16	335	12	325	7.32e-62	200
Msa0972820	MtrunA17_Chr4g0013821	37.267	322	190	7	18	335	11	324	5.13e-61	198
Msa0972820	MtrunA17_Chr4g0076211	40.264	303	167	9	36	335	42	333	6.13e-61	198
Msa0972820	MtrunA17_Chr7g0244451	38.312	308	172	6	33	335	22	316	1.50e-60	196
Msa0972820	MtrunA17_Chr7g0258811	36.012	336	206	6	5	335	40	371	2.52e-60	197
Msa0972820	MtrunA17_Chr4g0013171	35.061	328	202	7	11	335	2	321	2.87e-60	196
Msa0972820	MtrunA17_Chr7g0224371	36.474	329	195	7	11	335	4	322	5.07e-60	195
Msa0972820	MtrunA17_Chr6g0467251	36.577	298	179	5	35	331	36	324	8.28e-60	195
Msa0972820	MtrunA17_Chr2g0296621	37.049	305	175	9	35	335	50	341	1.17e-59	195
Msa0972820	MtrunA17_Chr4g0013201	38.158	304	178	5	33	335	44	338	1.18e-59	194
Msa0972820	MtrunA17_Chr1g0181481	36.928	306	185	4	32	335	24	323	1.28e-59	194
Msa0972820	MtrunA17_Chr3g0128061	38.636	308	183	4	31	335	22	326	1.37e-59	194
Msa0972820	MtrunA17_Chr2g0292091	35.562	329	201	8	12	335	3	325	1.85e-59	194
Msa0972820	MtrunA17_Chr3g0106901	39.375	320	183	6	18	335	13	323	2.21e-59	193
Msa0972820	MtrunA17_Chr1g0181511	36.275	306	187	4	32	335	24	323	2.43e-59	193
Msa0972820	MtrunA17_Chr2g0320101	35.922	309	182	5	31	335	21	317	2.78e-59	193
Msa0972820	MtrunA17_Chr8g0372601	36.275	306	189	5	33	335	28	330	2.86e-59	193
Msa0972820	MtrunA17_Chr1g0194271	37.736	318	182	6	31	335	26	340	2.87e-59	194
Msa0972820	MtrunA17_Chr3g0129061	36.280	328	188	6	14	335	10	322	3.40e-59	193
Msa0972820	MtrunA17_Chr2g0322861	36.533	323	191	9	21	335	70	386	4.03e-59	195
Msa0972820	MtrunA17_Chr3g0107881	37.942	311	178	8	31	335	23	324	5.23e-59	192
Msa0972820	MtrunA17_Chr5g0402581	34.568	324	198	6	18	335	11	326	1.60e-58	191
Msa0972820	MtrunA17_Chr2g0320061	35.366	328	194	7	14	335	3	318	2.47e-58	191
Msa0972820	MtrunA17_Chr4g0038161	35.625	320	194	6	20	335	9	320	3.13e-58	190
Msa0972820	MtrunA17_Chr4g0070951	37.309	327	186	10	21	335	10	329	1.21e-57	189
Msa0972820	MtrunA17_Chr3g0106921	34.084	311	194	6	28	335	18	320	1.54e-57	189
Msa0972820	MtrunA17_Chr5g0402571	33.951	324	201	5	18	335	10	326	1.86e-57	189
Msa0972820	MtrunA17_Chr2g0320031	34.462	325	202	6	14	335	3	319	2.19e-57	188
Msa0972820	MtrunA17_Chr1g0181431	35.410	305	189	4	33	335	25	323	2.29e-57	188
Msa0972820	MtrunA17_Chr3g0129041	35.671	328	190	6	14	335	10	322	3.41e-57	188
Msa0972820	MtrunA17_Chr2g0279041	36.111	324	192	8	18	335	11	325	8.72e-57	187
Msa0972820	MtrunA17_Chr4g0038151	35.738	305	190	4	32	335	22	321	1.64e-56	186
Msa0972820	MtrunA17_Chr2g0292261	36.129	310	189	6	31	335	25	330	1.95e-56	187
Msa0972820	MtrunA17_Chr4g0013181	35.667	300	183	6	38	335	62	353	7.50e-56	185
Msa0972820	MtrunA17_Chr4g0043391	34.579	321	197	7	20	335	12	324	1.04e-55	184
Msa0972820	MtrunA17_Chr2g0292111	36.774	310	187	6	31	335	25	330	1.39e-55	184
Msa0972820	MtrunA17_Chr2g0320051	35.161	310	184	6	31	335	21	318	2.26e-55	183
Msa0972820	MtrunA17_Chr2g0292271	36.050	319	195	6	22	335	16	330	3.49e-55	183
Msa0972820	MtrunA17_Chr2g0291751	36.656	311	186	7	31	335	25	330	4.22e-55	183
Msa0972820	MtrunA17_Chr4g0038171	35.220	318	199	6	20	335	9	321	4.57e-55	182
Msa0972820	MtrunA17_Chr2g0292101	36.538	312	181	7	33	335	23	326	5.55e-55	182
Msa0972820	MtrunA17_Chr2g0292291	34.505	313	191	5	31	335	26	332	1.21e-54	182
Msa0972820	MtrunA17_Chr1g0175561	36.556	331	196	11	12	335	3	326	1.62e-54	181
Msa0972820	MtrunA17_Chr2g0299691	35.843	332	186	9	20	335	38	358	4.42e-54	181
Msa0972820	MtrunA17_Chr5g0432341	36.893	309	179	8	33	335	23	321	5.81e-54	179
Msa0972820	MtrunA17_Chr3g0136751	33.841	328	205	6	13	335	2	322	6.36e-54	179
Msa0972820	MtrunA17_Chr5g0432351	36.246	309	181	8	33	335	23	321	9.20e-54	179
Msa0972820	MtrunA17_Chr5g0413051	36.808	307	178	8	39	335	77	377	1.00e-53	180
Msa0972820	MtrunA17_Chr5g0432331	34.877	324	195	8	18	335	39	352	7.76e-53	177
Msa0972820	MtrunA17_Chr6g0467121	35.880	301	182	5	35	335	74	363	2.49e-52	177
Msa0972820	MtrunA17_Chr4g0063671	35.077	325	189	9	22	335	7	320	1.38e-51	173
Msa0972820	MtrunA17_Chr2g0329641	37.013	308	181	7	34	335	35	335	2.58e-51	173
Msa0972820	MtrunA17_Chr5g0421411	36.620	284	168	7	60	335	6	285	3.63e-51	171
Msa0972820	MtrunA17_Chr6g0467161	31.611	329	206	6	17	335	17	336	6.43e-51	172
Msa0972820	MtrunA17_Chr1g0155611	34.967	306	190	6	35	335	46	347	1.44e-50	171
Msa0972820	MtrunA17_Chr2g0278671	34.713	314	186	8	31	335	20	323	4.75e-47	161
Msa0972820	MtrunA17_Chr2g0279061	38.077	260	148	6	82	335	14	266	7.51e-47	159
Msa0972820	MtrunA17_Chr2g0316791	33.433	335	187	9	33	334	74	405	1.01e-45	160
Msa0972820	MtrunA17_Chr2g0316481	32.836	335	189	9	33	334	74	405	3.62e-45	159
Msa0972820	MtrunA17_Chr2g0316831	32.836	335	189	9	33	334	110	441	9.98e-45	158
Msa0972820	MtrunA17_Chr2g0316191	32.440	336	190	8	33	334	74	406	1.55e-44	157
Msa0972820	MtrunA17_Chr2g0311251	32.537	335	189	9	33	334	9	339	4.21e-42	149
Msa0972820	MtrunA17_Chr2g0311241	30.851	376	182	11	33	334	58	429	4.40e-40	145
Msa0972820	MtrunA17_Chr3g0114461	39.378	193	110	3	144	335	6	192	1.78e-38	135
Msa0972820	MtrunA17_Chr5g0432401	30.650	323	169	8	18	334	12	285	8.90e-37	134
Msa0972820	MtrunA17_Chr4g0004591	28.349	321	167	5	35	334	77	355	2.86e-34	129
Msa0972820	MtrunA17_Chr2g0292281	33.810	210	124	4	130	335	18	216	2.05e-32	120
Msa0972820	MtrunA17_Chr2g0316811	38.372	172	101	3	33	202	48	216	4.21e-31	119
Msa0972820	MtrunA17_Chr2g0316141	30.741	270	167	5	82	334	11	277	2.51e-27	108
Msa0972820	MtrunA17_Chr2g0316181	30.741	270	167	5	82	334	11	277	2.51e-27	108
Msa0972820	MtrunA17_Chr1g0181501	34.715	193	116	4	147	335	3	189	4.27e-25	100
Msa0972820	MtrunA17_Chr1g0181491	37.600	125	74	3	32	156	9	129	1.56e-19	84.0
Msa0972820	MtrunA17_Chr3g0114491	37.069	116	71	2	32	147	15	128	3.11e-18	80.1
Msa0972820	MtrunA17_Chr7g0254181	43.396	106	55	3	98	203	22	122	1.49e-17	78.6
Msa0972820	MtrunA17_Chr3g0137751	26.217	267	134	7	58	314	97	310	3.69e-16	78.2
Msa0972820	MtrunA17_Chr5g0432321	31.707	123	77	2	158	280	17	132	4.10e-15	71.2
Msa0972820	MtrunA17_Chr4g0013811	33.333	78	52	0	143	220	1	78	8.74e-13	63.2
Msa0972820	MtrunA17_Chr7g0254171	42.466	73	40	1	82	154	4	74	5.13e-12	62.8
Msa0972820	MtrunA17_Chr1g0196191	57.377	61	24	1	82	142	31	89	8.44e-12	62.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0972820	AT5G40150.1	64.590	305	104	2	31	335	28	328	6.68e-152	430
Msa0972820	AT3G28200.1	64.918	305	102	2	31	335	17	316	1.73e-150	426
Msa0972820	AT5G47000.1	55.814	301	130	2	35	335	33	330	4.86e-124	359
Msa0972820	AT1G24110.1	54.072	307	139	2	30	335	17	322	1.46e-122	355
Msa0972820	AT4G17690.1	55.150	301	131	2	35	335	26	322	5.98e-120	348
Msa0972820	AT4G37530.1	45.192	312	165	4	28	335	20	329	6.61e-91	275
Msa0972820	AT5G14130.1	42.857	322	176	5	18	335	13	330	1.76e-87	266
Msa0972820	AT5G14130.2	42.857	322	176	5	18	335	54	371	3.02e-87	267
Msa0972820	AT4G37520.1	43.974	307	166	4	33	335	25	329	7.32e-87	265
Msa0972820	AT5G67400.1	43.689	309	168	4	31	335	23	329	3.49e-86	263
Msa0972820	AT4G37520.2	43.974	307	163	5	33	335	25	326	9.47e-85	259
Msa0972820	AT2G18980.1	41.617	334	179	6	6	335	2	323	1.87e-82	253
Msa0972820	AT3G49960.1	41.748	309	174	4	31	335	23	329	2.69e-80	248
Msa0972820	AT4G37530.2	45.627	263	137	4	28	286	20	280	4.28e-77	238
Msa0972820	AT4G30170.1	40.717	307	172	5	33	335	25	325	8.81e-77	239
Msa0972820	AT2G34060.1	36.283	339	196	5	12	331	5	342	1.84e-70	223
Msa0972820	AT3G17070.1	38.095	336	193	8	9	335	10	339	2.12e-70	223
Msa0972820	AT5G51890.1	40.705	312	171	8	22	328	13	315	7.80e-70	221
Msa0972820	AT5G17820.1	40.000	325	172	9	14	335	9	313	1.33e-69	220
Msa0972820	AT4G33420.1	37.771	323	185	6	15	335	17	325	4.63e-69	219
Msa0972820	AT4G33420.2	37.771	323	185	6	15	335	64	372	1.26e-68	219
Msa0972820	AT5G17820.2	40.061	327	169	9	14	335	62	366	1.33e-68	219
Msa0972820	AT4G36430.1	38.889	306	179	6	34	335	29	330	9.21e-67	213
Msa0972820	AT5G66390.1	40.532	301	171	6	39	335	37	333	1.94e-66	213
Msa0972820	AT1G05260.1	37.072	321	190	8	19	335	13	325	1.99e-66	212
Msa0972820	AT4G11290.1	37.730	326	192	8	16	335	6	326	4.19e-65	209
Msa0972820	AT5G05340.1	36.774	310	178	5	32	335	27	324	1.23e-64	207
Msa0972820	AT4G16270.1	38.636	308	175	9	35	335	48	348	1.69e-64	208
Msa0972820	AT2G22420.1	36.778	329	190	8	14	335	2	319	2.20e-64	207
Msa0972820	AT2G18150.1	37.209	301	181	6	39	335	40	336	9.23e-64	206
Msa0972820	AT4G31760.1	35.890	326	195	6	14	335	11	326	9.59e-64	205
Msa0972820	AT5G19880.1	38.730	315	179	6	30	335	20	329	1.01e-63	205
Msa0972820	AT2G18140.1	36.061	330	198	7	15	335	10	335	1.25e-63	205
Msa0972820	AT3G50990.1	36.070	341	205	7	4	335	5	341	3.48e-63	204
Msa0972820	AT2G24800.1	36.808	307	184	4	33	335	29	329	1.39e-62	202
Msa0972820	AT1G71695.1	35.465	344	203	6	5	335	2	339	7.37e-62	201
Msa0972820	AT4G21960.1	37.785	307	183	4	31	335	27	327	1.59e-61	199
Msa0972820	AT3G21770.1	37.179	312	187	7	24	331	18	324	2.35e-61	199
Msa0972820	AT4G08770.1	38.486	317	184	8	26	335	15	327	2.80e-61	199
Msa0972820	AT2G37130.1	36.013	311	190	5	28	335	23	327	8.31e-61	197
Msa0972820	AT2G37130.2	36.755	302	182	5	37	335	1	296	2.63e-60	195
Msa0972820	AT2G38380.1	36.452	310	189	6	31	335	27	333	6.31e-60	196
Msa0972820	AT5G42180.1	35.385	325	192	9	15	334	5	316	1.06e-59	194
Msa0972820	AT1G14540.1	34.783	322	201	6	16	335	1	315	1.19e-59	194
Msa0972820	AT1G30870.1	39.739	307	167	10	35	335	51	345	1.69e-59	195
Msa0972820	AT4G08780.1	38.095	315	184	8	28	335	17	327	2.02e-59	194
Msa0972820	AT1G05240.1	38.487	304	172	8	35	331	26	321	3.90e-59	193
Msa0972820	AT1G05250.1	38.487	304	172	8	35	331	26	321	3.90e-59	193
Msa0972820	AT2G35380.1	38.762	307	173	7	39	335	34	335	5.05e-59	193
Msa0972820	AT5G06730.1	35.329	334	205	7	10	335	4	334	7.04e-59	194
Msa0972820	AT3G03670.1	35.736	333	192	7	10	335	4	321	7.73e-59	192
Msa0972820	AT2G38390.1	37.299	311	185	7	31	335	27	333	1.07e-58	193
Msa0972820	AT1G68850.1	36.422	313	180	9	35	335	30	335	1.52e-58	192
Msa0972820	AT5G06720.1	37.299	311	184	8	31	335	28	333	1.92e-58	192
Msa0972820	AT3G01190.1	36.137	321	188	8	21	335	12	321	1.34e-57	189
Msa0972820	AT3G32980.1	35.220	318	197	6	24	335	20	334	1.35e-57	190
Msa0972820	AT5G58390.1	34.043	329	196	7	15	335	1	316	3.26e-57	188
Msa0972820	AT1G14550.1	35.385	325	199	7	14	335	5	321	4.69e-57	188
Msa0972820	AT3G49120.1	34.906	318	198	6	24	335	21	335	6.38e-57	188
Msa0972820	AT5G64110.1	37.417	302	175	7	39	335	38	330	6.73e-57	187
Msa0972820	AT5G58400.1	35.370	311	184	7	31	335	26	325	2.84e-56	186
Msa0972820	AT5G64120.1	35.526	304	187	6	33	335	33	328	6.64e-56	185
Msa0972820	AT4G33870.1	33.143	350	195	5	21	334	54	400	1.29e-55	186
Msa0972820	AT3G49110.1	34.591	318	199	6	24	335	22	336	3.99e-55	184
Msa0972820	AT2G39040.1	38.019	313	180	9	32	335	43	350	5.40e-55	183
Msa0972820	AT5G39580.1	38.158	304	172	8	37	335	27	319	7.47e-55	182
Msa0972820	AT3G17070.2	39.464	261	146	6	82	335	21	276	1.43e-54	180
Msa0972820	AT5G15180.1	34.627	335	197	9	13	335	5	329	6.97e-54	180
Msa0972820	AT1G34510.1	35.692	325	190	8	13	335	2	309	8.86e-54	179
Msa0972820	AT1G44970.1	34.936	312	186	7	33	335	43	346	1.08e-53	180
Msa0972820	AT4G26010.2	33.233	331	204	8	6	335	23	337	1.25e-53	179
Msa0972820	AT4G26010.1	33.642	324	198	8	13	335	2	309	1.46e-53	178
Msa0972820	AT1G49570.1	34.754	305	189	5	33	331	46	346	4.36e-53	178
Msa0972820	AT5G19890.1	34.405	311	187	9	32	335	27	327	1.05e-50	171
Msa0972820	AT4G25980.1	33.033	333	193	10	14	335	13	326	1.74e-50	171
Msa0972820	AT2G41480.1	34.146	328	195	8	18	335	12	328	2.53e-49	168
Msa0972820	AT2G43480.1	35.671	328	195	8	16	335	16	335	6.56e-49	167
Msa0972820	AT5G64100.1	35.526	304	180	8	37	335	39	331	8.34e-49	167
Msa0972820	AT5G24070.1	35.484	310	184	7	34	335	34	335	3.24e-48	165
Msa0972820	AT5G22410.1	34.539	304	184	9	34	331	27	321	1.14e-47	164
Msa0972820	AT1G77100.1	33.533	334	196	11	11	335	3	319	6.99e-45	156
Msa0972820	AT2G35380.2	38.627	233	132	4	112	335	17	247	5.14e-43	149
Msa0972820	AT2G24800.2	39.412	170	97	3	33	202	29	192	4.13e-33	123
Msa0972820	AT4G25980.2	34.615	182	111	5	24	204	60	234	3.00e-28	111
Msa0972820	AT5G39580.2	37.640	178	104	4	37	214	27	197	6.17e-27	106
Msa0972820	AT4G32320.1	26.786	280	136	7	45	314	99	319	2.38e-17	82.0
Msa0972820	AT4G08390.3	29.648	199	111	4	130	320	185	362	8.03e-16	78.2
Msa0972820	AT4G08390.2	29.648	199	111	4	130	320	186	363	8.88e-16	77.8
Msa0972820	AT4G08390.5	29.648	199	111	4	130	320	186	363	8.88e-16	77.8
Msa0972820	AT4G08390.1	29.648	199	111	4	130	320	186	363	8.88e-16	77.8
Msa0972820	AT3G42570.1	41.935	93	53	1	113	204	57	149	9.32e-16	73.9
Msa0972820	AT3G09640.2	26.761	213	113	6	110	318	73	246	7.39e-14	70.9
Msa0972820	AT3G09640.1	26.761	213	113	6	110	318	73	246	7.39e-14	70.9
Msa0972820	AT1G07890.2	29.744	195	94	6	129	318	90	246	8.43e-14	70.9
Msa0972820	AT1G07890.8	29.744	195	94	6	129	318	90	246	8.43e-14	70.9
Msa0972820	AT1G07890.4	29.744	195	94	6	129	318	90	246	8.43e-14	70.9
Msa0972820	AT1G07890.7	29.744	195	94	6	129	318	90	246	8.43e-14	70.9
Msa0972820	AT1G07890.1	29.744	195	94	6	129	318	90	246	8.43e-14	70.9
Msa0972820	AT1G07890.3	29.744	195	94	6	129	318	90	246	8.43e-14	70.9
Msa0972820	AT1G07890.5	29.744	195	94	6	129	318	90	246	8.43e-14	70.9
Msa0972820	AT1G07890.6	29.744	195	94	6	129	318	90	246	9.34e-14	70.5

Find 67 sgRNAs with CRISPR-Local

Find 170 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GGATCAAGATTATTTCTTTA+AGG	0.143575	6_4:+5109540	Msa0972820:CDS
CAGAATTTACCTAAAGGTTT+AGG	0.165196	6_4:+5109448	Msa0972820:CDS
TAAACATTATCAAACTTATT+TGG	0.189105	6_4:-5109421	None:intergenic
AGAATTTACCTAAAGGTTTA+GGG	0.281875	6_4:+5109449	Msa0972820:CDS
TACAACAATTCTTCTGGTTC+TGG	0.286642	6_4:+5109301	Msa0972820:CDS
TTTAACCCTTCAACAAATCT+TGG	0.291351	6_4:-5109337	None:intergenic
GAAGAAATGGTTGCTTTATC+TGG	0.318442	6_4:+5109229	Msa0972820:CDS
GATATTTACAACAATTCTTC+TGG	0.318776	6_4:+5109295	Msa0972820:CDS
TGTTTGTTTGTAGTAATCTA+AGG	0.321314	6_4:-5108753	None:intergenic
TTCAAAACCCCTAAACCTTT+AGG	0.324224	6_4:-5109457	None:intergenic
AGTTTCAATATTCGCGAAAC+GGG	0.324305	6_4:+5109195	Msa0972820:CDS
CACGTTCAGCTTTGTTGAAA+GGG	0.328180	6_4:-5108922	None:intergenic
AATTCTTCTGGTTCTGGTTC+AGG	0.343705	6_4:+5109307	Msa0972820:CDS
GACATCAACCTCTCTCTTCC+AGG	0.344076	6_4:+5108950	Msa0972820:CDS
GTCATTGTCATCGACGGCTT+TGG	0.349992	6_4:-5109166	None:intergenic
ACGGAGAGTGGCGGCGGCGG+TGG	0.370801	6_4:-5108837	None:intergenic
CGGCGGCGGTGGTTGGAGAT+TGG	0.376609	6_4:-5108826	None:intergenic
GAGACGGAGAGTGGCGGCGG+CGG	0.421113	6_4:-5108840	None:intergenic
AGAGTGGCGGCGGCGGTGGT+TGG	0.426793	6_4:-5108833	None:intergenic
GTTAGGACAGGAGAGTTCTA+AGG	0.433270	6_4:-5109008	None:intergenic
TCAGAGCAAGAGACAGTGTT+AGG	0.434139	6_4:-5109025	None:intergenic
GAAGAGACGGAGAGTGGCGG+CGG	0.442594	6_4:-5108843	None:intergenic
TTATCTGGTGCTCATACAGT+TGG	0.446715	6_4:+5109244	Msa0972820:CDS
TCCACAAAAGGTTTAGTTGA+AGG	0.448447	6_4:-5109505	None:intergenic
TCACGTTCAGCTTTGTTGAA+AGG	0.455448	6_4:-5108923	None:intergenic
CGTCGCAGCCGTTAGGGAGG+AGG	0.467163	6_4:-5108877	None:intergenic
ACGGAGGCGTCGCAGCCGTT+AGG	0.473671	6_4:-5108884	None:intergenic
CGTGATCTTCTTATCATGCT+TGG	0.474261	6_4:+5109067	Msa0972820:CDS
TTAGCAAATCTATCCACAAA+AGG	0.474475	6_4:-5109517	None:intergenic
AGGGGTTGAAGAGAGGAGGA+CGG	0.478008	6_4:-5108903	None:intergenic
TGTTGAAAGGGGTTGAAGAG+AGG	0.484577	6_4:-5108910	None:intergenic
GATTAGAAGAAGATGTGATC+AGG	0.486639	6_4:+5109624	Msa0972820:CDS
CGGAGGCGTCGCAGCCGTTA+GGG	0.497652	6_4:-5108883	None:intergenic
TCTGTGTCATCTGCCGTTGA+CGG	0.502316	6_4:+5109136	Msa0972820:CDS
CCACAAAAGGTTTAGTTGAA+GGG	0.502538	6_4:-5109504	None:intergenic
TATAATCCAAGATTTGTTGA+AGG	0.505931	6_4:+5109331	Msa0972820:CDS
GCAAGAGACAGTGTTAGGAC+AGG	0.508508	6_4:-5109020	None:intergenic
TGAATGATTTGTTCGAATTG+TGG	0.511315	6_4:-5108779	None:intergenic
TAGTTTCAATATTCGCGAAA+CGG	0.511725	6_4:+5109194	Msa0972820:CDS
ATGAGGTCAAAGGAGTCTCC+TGG	0.515886	6_4:-5108968	None:intergenic
GGCAGTCGTGGAGGAAGAGA+CGG	0.531026	6_4:-5108856	None:intergenic
GAATGTTCAGACTGGTAGGA+AGG	0.531795	6_4:+5109597	Msa0972820:CDS
ATAATCCAAGATTTGTTGAA+GGG	0.533288	6_4:+5109332	Msa0972820:CDS
TGAAAGGGGTTGAAGAGAGG+AGG	0.534695	6_4:-5108907	None:intergenic
GATCTTCTTATCATGCTTGG+TGG	0.554628	6_4:+5109070	Msa0972820:CDS
CGTTAGGGAGGAGGCAGTCG+TGG	0.559904	6_4:-5108868	None:intergenic
CCTCATTACAATGTTTACCT+AGG	0.560603	6_4:+5109094	Msa0972820:CDS
ATCTGTGTCATTGTCATCGA+CGG	0.571963	6_4:-5109172	None:intergenic
ACGTTCAGCTTTGTTGAAAG+GGG	0.574965	6_4:-5108921	None:intergenic
GATACGTACGATGAGGTCAA+AGG	0.582070	6_4:-5108978	None:intergenic
CACGACTGCCTCCTCCCTAA+CGG	0.589429	6_4:+5108869	Msa0972820:CDS
AATGTTCAGACTGGTAGGAA+GGG	0.612530	6_4:+5109598	Msa0972820:CDS
GAATTTACCTAAAGGTTTAG+GGG	0.612906	6_4:+5109450	Msa0972820:CDS
CTTTGGAAGAAAGCCGTCAA+CGG	0.615992	6_4:-5109149	None:intergenic
AGGCGTCGCAGCCGTTAGGG+AGG	0.621783	6_4:-5108880	None:intergenic
GTGGAGGAAGAGACGGAGAG+TGG	0.623125	6_4:-5108849	None:intergenic
AGGAGTCTCCTGGAAGAGAG+AGG	0.623254	6_4:-5108958	None:intergenic
GTTTCAATATTCGCGAAACG+GGG	0.630647	6_4:+5109196	Msa0972820:CDS
GGTTGAAGAGAGGAGGACGG+AGG	0.631104	6_4:-5108900	None:intergenic
GAGGAAGAGACGGAGAGTGG+CGG	0.632804	6_4:-5108846	None:intergenic
TAGGGAGGAGGCAGTCGTGG+AGG	0.639200	6_4:-5108865	None:intergenic
CGGCAGATGACACAGAACCT+CGG	0.640173	6_4:-5109129	None:intergenic
GTTTACCTAGGCCGTCGCGA+CGG	0.641782	6_4:+5109106	Msa0972820:CDS
AGGACAGGAGAGTTCTAAGG+CGG	0.642727	6_4:-5109005	None:intergenic
CCTAGGTAAACATTGTAATG+AGG	0.645276	6_4:-5109094	None:intergenic
GATCACGTGTAGCTGTAGCA+AGG	0.646540	6_4:-5109051	None:intergenic
GAAGGGTTAAAGAAAGCTTG+TGG	0.742356	6_4:+5109349	Msa0972820:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TAAACATTATCAAACTTATT+TGG	-	chr6_4:5109424-5109443	None:intergenic	15.0%
!!	TAAACATTATCAAACTTATT+TGG	-	chr6_4:5109424-5109443	None:intergenic	15.0%
!!!	TATTTTCAGAATTTACCTAA+AGG	+	chr6_4:5109442-5109461	Msa0972820:CDS	20.0%
!!!	TATTTTCAGAATTTACCTAA+AGG	+	chr6_4:5109442-5109461	Msa0972820:CDS	20.0%
!!!	ATCTAAGGTTAGTTTTGATT+CGG	-	chr6_4:5108741-5108760	None:intergenic	25.0%
!	TGTTTGTTTGTAGTAATCTA+AGG	-	chr6_4:5108756-5108775	None:intergenic	25.0%
!	GATATTTACAACAATTCTTC+TGG	+	chr6_4:5109295-5109314	Msa0972820:CDS	25.0%
!!!	TATAATCCAAGATTTGTTGA+AGG	+	chr6_4:5109331-5109350	Msa0972820:CDS	25.0%
!!!	ATAATCCAAGATTTGTTGAA+GGG	+	chr6_4:5109332-5109351	Msa0972820:CDS	25.0%
!	TCATTAAAAACAGACAAAGT+TGG	-	chr6_4:5109391-5109410	None:intergenic	25.0%
!	AGAATTTACCTAAAGGTTTA+GGG	+	chr6_4:5109449-5109468	Msa0972820:CDS	25.0%
!!	GGATCAAGATTATTTCTTTA+AGG	+	chr6_4:5109540-5109559	Msa0972820:CDS	25.0%
!!!	ATCTAAGGTTAGTTTTGATT+CGG	-	chr6_4:5108741-5108760	None:intergenic	25.0%
!	TGTTTGTTTGTAGTAATCTA+AGG	-	chr6_4:5108756-5108775	None:intergenic	25.0%
!	GATATTTACAACAATTCTTC+TGG	+	chr6_4:5109295-5109314	Msa0972820:CDS	25.0%
!!!	TATAATCCAAGATTTGTTGA+AGG	+	chr6_4:5109331-5109350	Msa0972820:CDS	25.0%
!!!	ATAATCCAAGATTTGTTGAA+GGG	+	chr6_4:5109332-5109351	Msa0972820:CDS	25.0%
!	TCATTAAAAACAGACAAAGT+TGG	-	chr6_4:5109391-5109410	None:intergenic	25.0%
!	AGAATTTACCTAAAGGTTTA+GGG	+	chr6_4:5109449-5109468	Msa0972820:CDS	25.0%
!!	GGATCAAGATTATTTCTTTA+AGG	+	chr6_4:5109540-5109559	Msa0972820:CDS	25.0%
!!	CAATGTTTTTGATGTTGTTG+AGG	-	chr6_4:5108672-5108691	None:intergenic	30.0%
!!	TGAATGATTTGTTCGAATTG+TGG	-	chr6_4:5108782-5108801	None:intergenic	30.0%
	TAGTTTCAATATTCGCGAAA+CGG	+	chr6_4:5109194-5109213	Msa0972820:CDS	30.0%
	TTTAACCCTTCAACAAATCT+TGG	-	chr6_4:5109340-5109359	None:intergenic	30.0%
	CAGAATTTACCTAAAGGTTT+AGG	+	chr6_4:5109448-5109467	Msa0972820:CDS	30.0%
	GAATTTACCTAAAGGTTTAG+GGG	+	chr6_4:5109450-5109469	Msa0972820:CDS	30.0%
	TTAGCAAATCTATCCACAAA+AGG	-	chr6_4:5109520-5109539	None:intergenic	30.0%
!!!	TTTTGTGGATAGATTTGCTA+AGG	+	chr6_4:5109519-5109538	Msa0972820:CDS	30.0%
!!	CAATGTTTTTGATGTTGTTG+AGG	-	chr6_4:5108672-5108691	None:intergenic	30.0%
!!	TGAATGATTTGTTCGAATTG+TGG	-	chr6_4:5108782-5108801	None:intergenic	30.0%
	TAGTTTCAATATTCGCGAAA+CGG	+	chr6_4:5109194-5109213	Msa0972820:CDS	30.0%
	TTTAACCCTTCAACAAATCT+TGG	-	chr6_4:5109340-5109359	None:intergenic	30.0%
	CAGAATTTACCTAAAGGTTT+AGG	+	chr6_4:5109448-5109467	Msa0972820:CDS	30.0%
	GAATTTACCTAAAGGTTTAG+GGG	+	chr6_4:5109450-5109469	Msa0972820:CDS	30.0%
	TTAGCAAATCTATCCACAAA+AGG	-	chr6_4:5109520-5109539	None:intergenic	30.0%
!!!	TTTTGTGGATAGATTTGCTA+AGG	+	chr6_4:5109519-5109538	Msa0972820:CDS	30.0%
	CCTAGGTAAACATTGTAATG+AGG	-	chr6_4:5109097-5109116	None:intergenic	35.0%
	CCTCATTACAATGTTTACCT+AGG	+	chr6_4:5109094-5109113	Msa0972820:CDS	35.0%
	AGTTTCAATATTCGCGAAAC+GGG	+	chr6_4:5109195-5109214	Msa0972820:CDS	35.0%
!	GAAGAAATGGTTGCTTTATC+TGG	+	chr6_4:5109229-5109248	Msa0972820:CDS	35.0%
!!	TACAACAATTCTTCTGGTTC+TGG	+	chr6_4:5109301-5109320	Msa0972820:CDS	35.0%
	TTCAAAACCCCTAAACCTTT+AGG	-	chr6_4:5109460-5109479	None:intergenic	35.0%
	CCACAAAAGGTTTAGTTGAA+GGG	-	chr6_4:5109507-5109526	None:intergenic	35.0%
	TCCACAAAAGGTTTAGTTGA+AGG	-	chr6_4:5109508-5109527	None:intergenic	35.0%
!	AGTCTTTTGAATGTTCAGAC+TGG	+	chr6_4:5109589-5109608	Msa0972820:CDS	35.0%
!	TTTTGAATGTTCAGACTGGT+AGG	+	chr6_4:5109593-5109612	Msa0972820:CDS	35.0%
	GATTAGAAGAAGATGTGATC+AGG	+	chr6_4:5109624-5109643	Msa0972820:CDS	35.0%
	CCTAGGTAAACATTGTAATG+AGG	-	chr6_4:5109097-5109116	None:intergenic	35.0%
	CCTCATTACAATGTTTACCT+AGG	+	chr6_4:5109094-5109113	Msa0972820:CDS	35.0%
	AGTTTCAATATTCGCGAAAC+GGG	+	chr6_4:5109195-5109214	Msa0972820:CDS	35.0%
!	GAAGAAATGGTTGCTTTATC+TGG	+	chr6_4:5109229-5109248	Msa0972820:CDS	35.0%
!!	TACAACAATTCTTCTGGTTC+TGG	+	chr6_4:5109301-5109320	Msa0972820:CDS	35.0%
	TTCAAAACCCCTAAACCTTT+AGG	-	chr6_4:5109460-5109479	None:intergenic	35.0%
	CCACAAAAGGTTTAGTTGAA+GGG	-	chr6_4:5109507-5109526	None:intergenic	35.0%
	TCCACAAAAGGTTTAGTTGA+AGG	-	chr6_4:5109508-5109527	None:intergenic	35.0%
!	AGTCTTTTGAATGTTCAGAC+TGG	+	chr6_4:5109589-5109608	Msa0972820:CDS	35.0%
!	TTTTGAATGTTCAGACTGGT+AGG	+	chr6_4:5109593-5109612	Msa0972820:CDS	35.0%
	GATTAGAAGAAGATGTGATC+AGG	+	chr6_4:5109624-5109643	Msa0972820:CDS	35.0%
!!!	GTTTTGATTCGGAGAGGTTA+AGG	-	chr6_4:5108730-5108749	None:intergenic	40.0%
!!!	AGGTTAGTTTTGATTCGGAG+AGG	-	chr6_4:5108736-5108755	None:intergenic	40.0%
!	TGGAGATTGGATCTGTTTTG+AGG	-	chr6_4:5108816-5108835	None:intergenic	40.0%
!!	ACGTTCAGCTTTGTTGAAAG+GGG	-	chr6_4:5108924-5108943	None:intergenic	40.0%
!!	CACGTTCAGCTTTGTTGAAA+GGG	-	chr6_4:5108925-5108944	None:intergenic	40.0%
!!	TCACGTTCAGCTTTGTTGAA+AGG	-	chr6_4:5108926-5108945	None:intergenic	40.0%
	CGTGATCTTCTTATCATGCT+TGG	+	chr6_4:5109067-5109086	Msa0972820:CDS	40.0%
	GATCTTCTTATCATGCTTGG+TGG	+	chr6_4:5109070-5109089	Msa0972820:CDS	40.0%
!	ATCTGTGTCATTGTCATCGA+CGG	-	chr6_4:5109175-5109194	None:intergenic	40.0%
	GTTTCAATATTCGCGAAACG+GGG	+	chr6_4:5109196-5109215	Msa0972820:CDS	40.0%
!	GGGTTTTACGGTTGAAGAAA+TGG	+	chr6_4:5109216-5109235	Msa0972820:CDS	40.0%
	TTATCTGGTGCTCATACAGT+TGG	+	chr6_4:5109244-5109263	Msa0972820:CDS	40.0%
!!	AATTCTTCTGGTTCTGGTTC+AGG	+	chr6_4:5109307-5109326	Msa0972820:CDS	40.0%
	GAAGGGTTAAAGAAAGCTTG+TGG	+	chr6_4:5109349-5109368	Msa0972820:CDS	40.0%
!!!	GGGGTTTTGAAATCTGATCA+TGG	+	chr6_4:5109469-5109488	Msa0972820:CDS	40.0%
!	CCCTTCAACTAAACCTTTTG+TGG	+	chr6_4:5109504-5109523	Msa0972820:CDS	40.0%
	AATGTTCAGACTGGTAGGAA+GGG	+	chr6_4:5109598-5109617	Msa0972820:CDS	40.0%
!!!	GTTTTGATTCGGAGAGGTTA+AGG	-	chr6_4:5108730-5108749	None:intergenic	40.0%
!!!	AGGTTAGTTTTGATTCGGAG+AGG	-	chr6_4:5108736-5108755	None:intergenic	40.0%
!	TGGAGATTGGATCTGTTTTG+AGG	-	chr6_4:5108816-5108835	None:intergenic	40.0%
!!	ACGTTCAGCTTTGTTGAAAG+GGG	-	chr6_4:5108924-5108943	None:intergenic	40.0%
!!	CACGTTCAGCTTTGTTGAAA+GGG	-	chr6_4:5108925-5108944	None:intergenic	40.0%
!!	TCACGTTCAGCTTTGTTGAA+AGG	-	chr6_4:5108926-5108945	None:intergenic	40.0%
	CGTGATCTTCTTATCATGCT+TGG	+	chr6_4:5109067-5109086	Msa0972820:CDS	40.0%
	GATCTTCTTATCATGCTTGG+TGG	+	chr6_4:5109070-5109089	Msa0972820:CDS	40.0%
!	ATCTGTGTCATTGTCATCGA+CGG	-	chr6_4:5109175-5109194	None:intergenic	40.0%
	GTTTCAATATTCGCGAAACG+GGG	+	chr6_4:5109196-5109215	Msa0972820:CDS	40.0%
!	GGGTTTTACGGTTGAAGAAA+TGG	+	chr6_4:5109216-5109235	Msa0972820:CDS	40.0%
	TTATCTGGTGCTCATACAGT+TGG	+	chr6_4:5109244-5109263	Msa0972820:CDS	40.0%
!!	AATTCTTCTGGTTCTGGTTC+AGG	+	chr6_4:5109307-5109326	Msa0972820:CDS	40.0%
	GAAGGGTTAAAGAAAGCTTG+TGG	+	chr6_4:5109349-5109368	Msa0972820:CDS	40.0%
!!!	GGGGTTTTGAAATCTGATCA+TGG	+	chr6_4:5109469-5109488	Msa0972820:CDS	40.0%
!	CCCTTCAACTAAACCTTTTG+TGG	+	chr6_4:5109504-5109523	Msa0972820:CDS	40.0%
	AATGTTCAGACTGGTAGGAA+GGG	+	chr6_4:5109598-5109617	Msa0972820:CDS	40.0%
	TGTTGAAAGGGGTTGAAGAG+AGG	-	chr6_4:5108913-5108932	None:intergenic	45.0%
	GATACGTACGATGAGGTCAA+AGG	-	chr6_4:5108981-5109000	None:intergenic	45.0%
!!	CGGTTTTGATACGTACGATG+AGG	-	chr6_4:5108988-5109007	None:intergenic	45.0%
	GTTAGGACAGGAGAGTTCTA+AGG	-	chr6_4:5109011-5109030	None:intergenic	45.0%
	TCAGAGCAAGAGACAGTGTT+AGG	-	chr6_4:5109028-5109047	None:intergenic	45.0%
!	CTTTGGAAGAAAGCCGTCAA+CGG	-	chr6_4:5109152-5109171	None:intergenic	45.0%
!	ATTCGCGAAACGGGGTTTTA+CGG	+	chr6_4:5109204-5109223	Msa0972820:CDS	45.0%
	GAATGTTCAGACTGGTAGGA+AGG	+	chr6_4:5109597-5109616	Msa0972820:CDS	45.0%
	TGTTGAAAGGGGTTGAAGAG+AGG	-	chr6_4:5108913-5108932	None:intergenic	45.0%
	GATACGTACGATGAGGTCAA+AGG	-	chr6_4:5108981-5109000	None:intergenic	45.0%
!!	CGGTTTTGATACGTACGATG+AGG	-	chr6_4:5108988-5109007	None:intergenic	45.0%
	GTTAGGACAGGAGAGTTCTA+AGG	-	chr6_4:5109011-5109030	None:intergenic	45.0%
	TCAGAGCAAGAGACAGTGTT+AGG	-	chr6_4:5109028-5109047	None:intergenic	45.0%
!	CTTTGGAAGAAAGCCGTCAA+CGG	-	chr6_4:5109152-5109171	None:intergenic	45.0%
!	ATTCGCGAAACGGGGTTTTA+CGG	+	chr6_4:5109204-5109223	Msa0972820:CDS	45.0%
	GAATGTTCAGACTGGTAGGA+AGG	+	chr6_4:5109597-5109616	Msa0972820:CDS	45.0%
	TGAAAGGGGTTGAAGAGAGG+AGG	-	chr6_4:5108910-5108929	None:intergenic	50.0%
	GACATCAACCTCTCTCTTCC+AGG	+	chr6_4:5108950-5108969	Msa0972820:CDS	50.0%
	ATGAGGTCAAAGGAGTCTCC+TGG	-	chr6_4:5108971-5108990	None:intergenic	50.0%
!!	AGGACAGGAGAGTTCTAAGG+CGG	-	chr6_4:5109008-5109027	None:intergenic	50.0%
	GCAAGAGACAGTGTTAGGAC+AGG	-	chr6_4:5109023-5109042	None:intergenic	50.0%
	GATCACGTGTAGCTGTAGCA+AGG	-	chr6_4:5109054-5109073	None:intergenic	50.0%
	TCTGTGTCATCTGCCGTTGA+CGG	+	chr6_4:5109136-5109155	Msa0972820:CDS	50.0%
	GTCATTGTCATCGACGGCTT+TGG	-	chr6_4:5109169-5109188	None:intergenic	50.0%
	TGAAAGGGGTTGAAGAGAGG+AGG	-	chr6_4:5108910-5108929	None:intergenic	50.0%
	GACATCAACCTCTCTCTTCC+AGG	+	chr6_4:5108950-5108969	Msa0972820:CDS	50.0%
	ATGAGGTCAAAGGAGTCTCC+TGG	-	chr6_4:5108971-5108990	None:intergenic	50.0%
!!	AGGACAGGAGAGTTCTAAGG+CGG	-	chr6_4:5109008-5109027	None:intergenic	50.0%
	GCAAGAGACAGTGTTAGGAC+AGG	-	chr6_4:5109023-5109042	None:intergenic	50.0%
	GATCACGTGTAGCTGTAGCA+AGG	-	chr6_4:5109054-5109073	None:intergenic	50.0%
	TCTGTGTCATCTGCCGTTGA+CGG	+	chr6_4:5109136-5109155	Msa0972820:CDS	50.0%
	GTCATTGTCATCGACGGCTT+TGG	-	chr6_4:5109169-5109188	None:intergenic	50.0%
	AGGGGTTGAAGAGAGGAGGA+CGG	-	chr6_4:5108906-5108925	None:intergenic	55.0%
	AGGAGTCTCCTGGAAGAGAG+AGG	-	chr6_4:5108961-5108980	None:intergenic	55.0%
	CGGCAGATGACACAGAACCT+CGG	-	chr6_4:5109132-5109151	None:intergenic	55.0%
	AGGGGTTGAAGAGAGGAGGA+CGG	-	chr6_4:5108906-5108925	None:intergenic	55.0%
	AGGAGTCTCCTGGAAGAGAG+AGG	-	chr6_4:5108961-5108980	None:intergenic	55.0%
	CGGCAGATGACACAGAACCT+CGG	-	chr6_4:5109132-5109151	None:intergenic	55.0%
	GAGGAAGAGACGGAGAGTGG+CGG	-	chr6_4:5108849-5108868	None:intergenic	60.0%
	GTGGAGGAAGAGACGGAGAG+TGG	-	chr6_4:5108852-5108871	None:intergenic	60.0%
	GGCAGTCGTGGAGGAAGAGA+CGG	-	chr6_4:5108859-5108878	None:intergenic	60.0%
	CACGACTGCCTCCTCCCTAA+CGG	+	chr6_4:5108869-5108888	Msa0972820:CDS	60.0%
	GGTTGAAGAGAGGAGGACGG+AGG	-	chr6_4:5108903-5108922	None:intergenic	60.0%
	GTTTACCTAGGCCGTCGCGA+CGG	+	chr6_4:5109106-5109125	Msa0972820:CDS	60.0%
	GAGGAAGAGACGGAGAGTGG+CGG	-	chr6_4:5108849-5108868	None:intergenic	60.0%
	GTGGAGGAAGAGACGGAGAG+TGG	-	chr6_4:5108852-5108871	None:intergenic	60.0%
	GGCAGTCGTGGAGGAAGAGA+CGG	-	chr6_4:5108859-5108878	None:intergenic	60.0%
	CACGACTGCCTCCTCCCTAA+CGG	+	chr6_4:5108869-5108888	Msa0972820:CDS	60.0%
	GGTTGAAGAGAGGAGGACGG+AGG	-	chr6_4:5108903-5108922	None:intergenic	60.0%
	GTTTACCTAGGCCGTCGCGA+CGG	+	chr6_4:5109106-5109125	Msa0972820:CDS	60.0%
	GAAGAGACGGAGAGTGGCGG+CGG	-	chr6_4:5108846-5108865	None:intergenic	65.0%
	TAGGGAGGAGGCAGTCGTGG+AGG	-	chr6_4:5108868-5108887	None:intergenic	65.0%
	CGTTAGGGAGGAGGCAGTCG+TGG	-	chr6_4:5108871-5108890	None:intergenic	65.0%
	GAAGAGACGGAGAGTGGCGG+CGG	-	chr6_4:5108846-5108865	None:intergenic	65.0%
	TAGGGAGGAGGCAGTCGTGG+AGG	-	chr6_4:5108868-5108887	None:intergenic	65.0%
	CGTTAGGGAGGAGGCAGTCG+TGG	-	chr6_4:5108871-5108890	None:intergenic	65.0%
	CGGCGGCGGTGGTTGGAGAT+TGG	-	chr6_4:5108829-5108848	None:intergenic	70.0%
	CGTCGCAGCCGTTAGGGAGG+AGG	-	chr6_4:5108880-5108899	None:intergenic	70.0%
!	AGGCGTCGCAGCCGTTAGGG+AGG	-	chr6_4:5108883-5108902	None:intergenic	70.0%
!!	CGGAGGCGTCGCAGCCGTTA+GGG	-	chr6_4:5108886-5108905	None:intergenic	70.0%
!!	ACGGAGGCGTCGCAGCCGTT+AGG	-	chr6_4:5108887-5108906	None:intergenic	70.0%
	CAGAACCTCGGCCGTCGCGA+CGG	-	chr6_4:5109120-5109139	None:intergenic	70.0%
	CGGCGGCGGTGGTTGGAGAT+TGG	-	chr6_4:5108829-5108848	None:intergenic	70.0%
	CGTCGCAGCCGTTAGGGAGG+AGG	-	chr6_4:5108880-5108899	None:intergenic	70.0%
!	AGGCGTCGCAGCCGTTAGGG+AGG	-	chr6_4:5108883-5108902	None:intergenic	70.0%
!!	CGGAGGCGTCGCAGCCGTTA+GGG	-	chr6_4:5108886-5108905	None:intergenic	70.0%
!!	ACGGAGGCGTCGCAGCCGTT+AGG	-	chr6_4:5108887-5108906	None:intergenic	70.0%
	CAGAACCTCGGCCGTCGCGA+CGG	-	chr6_4:5109120-5109139	None:intergenic	70.0%
	AGAGTGGCGGCGGCGGTGGT+TGG	-	chr6_4:5108836-5108855	None:intergenic	75.0%
	GAGACGGAGAGTGGCGGCGG+CGG	-	chr6_4:5108843-5108862	None:intergenic	75.0%
	AGAGTGGCGGCGGCGGTGGT+TGG	-	chr6_4:5108836-5108855	None:intergenic	75.0%
	GAGACGGAGAGTGGCGGCGG+CGG	-	chr6_4:5108843-5108862	None:intergenic	75.0%
!	ACGGAGAGTGGCGGCGGCGG+TGG	-	chr6_4:5108840-5108859	None:intergenic	80.0%
!	CTCGGCCGTCGCGACGGCCT+AGG	-	chr6_4:5109114-5109133	None:intergenic	80.0%
!	CTAGGCCGTCGCGACGGCCG+AGG	+	chr6_4:5109112-5109131	Msa0972820:CDS	80.0%
!	ACGGAGAGTGGCGGCGGCGG+TGG	-	chr6_4:5108840-5108859	None:intergenic	80.0%
!	CTCGGCCGTCGCGACGGCCT+AGG	-	chr6_4:5109114-5109133	None:intergenic	80.0%
!	CTAGGCCGTCGCGACGGCCG+AGG	+	chr6_4:5109112-5109131	Msa0972820:CDS	80.0%

Chromosome	Type	Strat	End	Strand	Name
chr6_4	gene	5108647	5109654	5108647	ID=Msa0972820;Name=Msa0972820
chr6_4	mRNA	5108647	5109654	5108647	ID=Msa0972820-mRNA-1;Parent=Msa0972820;Name=Msa0972820-mRNA-1;_AED=0.02;_eAED=0.02;_QI=0\|-1\|0\|1\|-1\|1\|1\|0\|335
chr6_4	exon	5108647	5109654	5108647	ID=Msa0972820-mRNA-1:exon:2206;Parent=Msa0972820-mRNA-1
chr6_4	CDS	5108647	5109654	5108647	ID=Msa0972820-mRNA-1:cds;Parent=Msa0972820-mRNA-1

Gene Sequence

>Msa0972820

ATGGCAGCAACAACAAAAACAACCTCAACAACATCAAAAACATTGTTGTCATTGTTTTTCTTCTTCAACATCATCATTAACCTTAACCTCTCCGAATCAAAACTAACCTTAGATTACTACAAACAAACATGTCCACAATTCGAACAAATCATTCAACAAACAGTAACCTCAAAACAGATCCAATCTCCAACCACCGCCGCCGCCACTCTCCGTCTCTTCCTCCACGACTGCCTCCTCCCTAACGGCTGCGACGCCTCCGTCCTCCTCTCTTCAACCCCTTTCAACAAAGCTGAACGTGACAACGACATCAACCTCTCTCTTCCAGGAGACTCCTTTGACCTCATCGTACGTATCAAAACCGCCTTAGAACTCTCCTGTCCTAACACTGTCTCTTGCTCTGACATCCTTGCTACAGCTACACGTGATCTTCTTATCATGCTTGGTGGTCCTCATTACAATGTTTACCTAGGCCGTCGCGACGGCCGAGGTTCTGTGTCATCTGCCGTTGACGGCTTTCTTCCAAAGCCGTCGATGACAATGACACAGATAGTTTCAATATTCGCGAAACGGGGTTTTACGGTTGAAGAAATGGTTGCTTTATCTGGTGCTCATACAGTTGGACTTTCACATTGTAGTGAAATTAGTTCAGATATTTACAACAATTCTTCTGGTTCTGGTTCAGGTTATAATCCAAGATTTGTTGAAGGGTTAAAGAAAGCTTGTGGTGATTATAAGAAGAATCCAACTTTGTCTGTTTTTAATGATATTATGACACCAAATAAGTTTGATAATGTTTATTTTCAGAATTTACCTAAAGGTTTAGGGGTTTTGAAATCTGATCATGGATTGTTTAGTGACCCTTCAACTAAACCTTTTGTGGATAGATTTGCTAAGGATCAAGATTATTTCTTTAAGGTTTTTGCTAGTTCAATGCAAAAGCTTAGTCTTTTGAATGTTCAGACTGGTAGGAAGGGTGAGATTAGAAGAAGATGTGATCAGGTTAATTGA

Protein sequence

>Msa0972820

MAATTKTTSTTSKTLLSLFFFFNIIINLNLSESKLTLDYYKQTCPQFEQIIQQTVTSKQIQSPTTAAATLRLFLHDCLLPNGCDASVLLSSTPFNKAERDNDINLSLPGDSFDLIVRIKTALELSCPNTVSCSDILATATRDLLIMLGGPHYNVYLGRRDGRGSVSSAVDGFLPKPSMTMTQIVSIFAKRGFTVEEMVALSGAHTVGLSHCSEISSDIYNNSSGSGSGYNPRFVEGLKKACGDYKKNPTLSVFNDIMTPNKFDNVYFQNLPKGLGVLKSDHGLFSDPSTKPFVDRFAKDQDYFFKVFASSMQKLSLLNVQTGRKGEIRRRCDQVN*