AlfalfaGEDB | Msa0939730

M. sativa cultivar zhongmu-4 / Msa0939730

KEGG: -
GO: GO:0000003 GO:0001558 GO:0003674 GO:0003824 GO:0004672 GO:0005575 GO:0005618 GO:0005623 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0007275 GO:0008150 GO:0008152 GO:0009506 GO:0009605 GO:0009607 GO:0009620 GO:0009719 GO:0009723 GO:0009725 GO:0009741 GO:0009787 GO:0009788 GO:0009791 GO:0009856 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010118 GO:0010483 GO:0010646 GO:0010648 GO:0014070 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0022414 GO:0022622 GO:0023051 GO:0023057 GO:0030054 GO:0030308 GO:0030312 GO:0032501 GO:0032502 GO:0033993 GO:0036211 GO:0040008 GO:0042221 GO:0043170 GO:0043207 GO:0043412 GO:0043680 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044426 GO:0044462 GO:0044464 GO:0044703 GO:0044706 GO:0045926 GO:0046777 GO:0048364 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051128 GO:0051703 GO:0051704 GO:0051707 GO:0055044 GO:0065007 GO:0071704 GO:0071944 GO:0098542 GO:0099402 GO:0140096 GO:1901419 GO:1901420 GO:1901564 GO:1901700 GO:1905957 GO:1905958
PFAM: PF12819.10

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0939730	KEH25125.1	86.696	451	49	4	1	442	1	449	0.0	791

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0939730	sp\|Q9SCZ4\|FERON_ARATH	38.073	436	234	16	18	438	21	435	1.88e-72	248

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0939730	A0A072UH49	86.696	451	49	4	1	442	1	449	0.0	791

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0721650	Msa0939730	0.822415	2.398057e-53	-8.615850e-47
Msa0193100	Msa0939730	0.815233	1.026518e-51	-8.615850e-47
Msa0234800	Msa0939730	0.800488	1.407782e-48	-8.615850e-47
Msa0939730	Msa0976280	0.853829	1.844580e-61	-8.615850e-47
Msa0939730	Msa1463890	0.802328	5.910980e-49	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0939730	MtrunA17_Chr6g0455311	86.696	451	49	4	1	442	1	449	0.0	786
Msa0939730	MtrunA17_Chr6g0455321	79.418	481	69	9	1	458	1	474	0.0	740
Msa0939730	MtrunA17_Chr5g0420171	36.943	471	261	15	1	452	2	455	8.69e-82	269
Msa0939730	MtrunA17_Chr7g0219781	39.905	421	225	18	26	426	31	443	4.23e-76	255
Msa0939730	MtrunA17_Chr7g0219671	39.480	423	223	18	26	424	29	442	4.24e-74	249
Msa0939730	MtrunA17_Chr5g0420151	34.958	472	270	14	1	452	2	456	6.50e-73	245
Msa0939730	MtrunA17_Chr7g0219601	37.969	453	233	21	26	452	29	459	4.28e-72	244
Msa0939730	MtrunA17_Chr4g0025961	38.031	447	231	18	7	422	5	436	4.55e-72	244
Msa0939730	MtrunA17_Chr7g0219741	38.298	470	256	22	12	457	13	472	4.61e-72	238
Msa0939730	MtrunA17_Chr7g0219651	39.817	437	225	18	12	421	1008	1433	1.48e-71	246
Msa0939730	MtrunA17_Chr7g0219651	38.084	428	229	19	26	424	29	449	7.16e-65	226
Msa0939730	MtrunA17_Chr7g0245131	36.916	428	244	12	11	426	10	423	2.27e-71	242
Msa0939730	MtrunA17_Chr7g0219721	38.043	460	239	20	26	455	31	474	6.17e-69	235
Msa0939730	MtrunA17_Chr7g0219691	37.983	466	231	22	26	455	31	474	6.97e-69	235
Msa0939730	MtrunA17_Chr7g0219611	36.748	449	248	19	26	455	29	460	8.36e-69	234
Msa0939730	MtrunA17_Chr7g0219681	39.286	420	221	19	26	424	29	435	9.94e-69	234
Msa0939730	MtrunA17_Chr7g0219591	39.860	429	209	20	26	425	29	437	1.03e-68	228
Msa0939730	MtrunA17_Chr7g0219571	36.384	448	250	18	31	451	37	476	6.02e-65	224
Msa0939730	MtrunA17_Chr1g0190581	31.455	426	262	15	8	426	5	407	1.75e-47	175
Msa0939730	MtrunA17_Chr7g0274261	31.860	430	249	16	14	426	15	417	1.73e-45	169
Msa0939730	MtrunA17_Chr5g0420181	30.597	402	251	15	35	422	27	414	1.16e-42	160
Msa0939730	MtrunA17_Chr2g0292501	28.431	408	239	16	35	420	32	408	7.35e-30	123
Msa0939730	MtrunA17_Chr2g0318301	28.750	400	235	15	27	414	27	388	4.15e-28	117
Msa0939730	MtrunA17_Chr6g0468691	26.726	449	274	17	26	457	22	432	1.82e-27	115
Msa0939730	MtrunA17_Chr1g0165521	27.209	430	250	17	1	423	3	376	8.96e-26	110
Msa0939730	MtrunA17_Chr7g0248161	25.446	448	294	16	11	447	9	427	3.80e-25	107
Msa0939730	MtrunA17_Chr1g0202711	26.398	447	273	19	26	457	40	445	5.26e-25	108
Msa0939730	MtrunA17_Chr2g0327671	28.538	431	242	23	10	416	10	398	1.07e-24	107
Msa0939730	MtrunA17_Chr7g0219641	33.010	206	121	8	245	446	1	193	4.94e-24	99.8
Msa0939730	MtrunA17_Chr4g0030441	29.683	347	203	16	27	361	28	345	5.18e-24	105
Msa0939730	MtrunA17_Chr8g0361611	26.415	371	213	16	1	350	3	334	3.39e-22	99.8
Msa0939730	MtrunA17_Chr4g0061081	26.382	398	237	19	81	458	95	456	5.97e-22	99.4
Msa0939730	MtrunA17_Chr8g0352381	28.193	415	220	19	27	413	59	423	4.16e-21	96.7
Msa0939730	MtrunA17_Chr4g0053521	25.408	429	260	20	10	417	566	955	8.89e-19	89.7
Msa0939730	MtrunA17_Chr4g0053521	23.614	415	277	19	10	411	9	396	1.98e-13	72.8
Msa0939730	MtrunA17_Chr5g0420161	36.364	143	84	4	281	422	54	190	4.66e-18	86.7
Msa0939730	MtrunA17_Chr4g0053571	25.576	434	254	21	5	411	3	394	7.52e-18	86.7

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0939730	AT3G51550.1	38.073	436	234	16	18	438	21	435	1.92e-73	248
Msa0939730	AT5G39000.1	36.804	413	231	14	27	427	26	420	5.73e-68	233
Msa0939730	AT5G38990.1	35.780	436	248	18	4	426	1	417	2.16e-61	215
Msa0939730	AT5G39020.1	34.086	443	256	16	26	451	22	445	6.19e-61	213
Msa0939730	AT5G39030.1	34.353	425	246	15	9	420	3	407	4.48e-57	202
Msa0939730	AT5G39030.2	35.135	407	231	15	27	420	15	401	2.03e-56	200
Msa0939730	AT3G04690.1	34.328	402	232	18	35	426	31	410	2.70e-51	186
Msa0939730	AT5G28680.1	33.023	430	252	17	10	426	7	413	1.34e-50	184
Msa0939730	AT5G28680.2	33.023	430	252	17	10	426	7	413	1.34e-50	184
Msa0939730	AT1G30570.1	28.571	434	259	20	7	420	9	411	4.38e-34	136
Msa0939730	AT5G59700.1	26.824	466	279	20	11	458	9	430	7.72e-31	126
Msa0939730	AT3G46290.1	29.327	416	246	20	7	413	6	382	1.78e-29	122
Msa0939730	AT4G00300.1	27.381	420	272	19	5	413	3	400	7.02e-29	119
Msa0939730	AT5G54380.1	27.725	422	271	16	8	423	5	398	4.30e-27	115
Msa0939730	AT2G21480.1	28.000	400	244	20	26	413	50	417	1.58e-25	110
Msa0939730	AT5G61350.1	26.144	459	278	20	26	458	27	450	1.66e-25	110
Msa0939730	AT5G24010.1	27.619	420	267	19	13	421	10	403	2.06e-23	103
Msa0939730	AT4G39110.1	26.119	402	249	16	26	413	51	418	4.63e-23	103
Msa0939730	AT2G23200.1	26.824	425	238	17	7	411	13	384	2.99e-19	91.3
Msa0939730	AT2G39360.1	29.240	342	188	20	4	330	1	303	8.39e-19	90.1

Find 99 sgRNAs with CRISPR-Local

Find 296 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ACTTTGTTTATGGAAGATTT+TGG	0.221566	6_3:+11838441	None:intergenic
TGAATATGGAACTTTGTTTA+TGG	0.239856	6_3:+11838431	None:intergenic
TTACTATTACTTTCACTCTT+TGG	0.261504	6_3:+11836667	None:intergenic
TGGGAATTTCCAGTTAATTC+TGG	0.269322	6_3:-11836868	Msa0939730:CDS
TGATGTTGGTGTTCTTAAAT+AGG	0.277271	6_3:+11837029	None:intergenic
GAAATTCCCAAGTTAGGTTT+AGG	0.292191	6_3:+11836881	None:intergenic
GTATAAGAGGGTGATGATTA+TGG	0.300832	6_3:+11838629	None:intergenic
AGATGATGATAAGGTTTCTT+TGG	0.312830	6_3:+11838764	None:intergenic
AATGGAAATTCTAATAACTA+TGG	0.317817	6_3:-11838138	Msa0939730:CDS
TTCTTCTCTTTAACCGGATC+TGG	0.322529	6_3:+11836523	None:intergenic
CCACTATTCTTCTCTTTAAC+CGG	0.327578	6_3:+11836517	None:intergenic
TAACTGGAAATTCCCAAGTT+AGG	0.329146	6_3:+11836875	None:intergenic
GTCCTTTGGTGCTATGTAAT+CGG	0.344263	6_3:+11836954	None:intergenic
AAAATTCAAATGCATGCTTA+TGG	0.358421	6_3:-11836628	Msa0939730:CDS
TTATTAGAATTTCCATTACT+TGG	0.365132	6_3:+11838144	None:intergenic
ACACAGGCATGCTCAGAAAC+TGG	0.368764	6_3:-11837068	Msa0939730:CDS
TATACTCCATTGCAGATTAC+AGG	0.368816	6_3:-11837131	Msa0939730:intron
GATAAACGAGCTGTTGAATA+TGG	0.371772	6_3:+11838417	None:intergenic
AACCTCAATTGTGGCACAAC+AGG	0.373259	6_3:-11838555	Msa0939730:CDS
AATTATTTCTATTATTATAG+TGG	0.373655	6_3:+11836465	None:intergenic
CACATTTCCTTGTATATAAA+CGG	0.380486	6_3:+11836771	None:intergenic
CTGGCTTCACTTACTTCATC+AGG	0.383397	6_3:-11836849	Msa0939730:CDS
ATGCCTGTGTCTTGAATGTT+TGG	0.390086	6_3:+11837081	None:intergenic
ACAAACTCCTAAACCTAACT+TGG	0.401153	6_3:-11836888	Msa0939730:CDS
AAACCGTTGGTATAAGTAGT+AGG	0.406261	6_3:+11838327	None:intergenic
AAATGGACACAAAATCAAAA+AGG	0.416019	6_3:-11836724	Msa0939730:CDS
GGGAGGTGGAAAAGTATAAG+AGG	0.417418	6_3:+11838616	None:intergenic
GGTGTATAATATAGATCATC+AGG	0.426588	6_3:+11838084	None:intergenic
TCACCGGCGCTAGTTATGTT+CGG	0.428929	6_3:+11836805	None:intergenic
GGCTTGAGAATGTAGAGAAA+GGG	0.431514	6_3:+11838785	None:intergenic
TTGAGGTTAAAACGGTCAAT+TGG	0.438656	6_3:+11838570	None:intergenic
CGTAGGCTTGAAGGTGTAAG+AGG	0.448967	6_3:+11838595	None:intergenic
GTTTAGGAGTTTGTTGAGAG+TGG	0.450722	6_3:+11836897	None:intergenic
TAAGTGAAGCCAGAATTAAC+TGG	0.456196	6_3:+11836859	None:intergenic
GTTGGTTCGAAGAATCTTGC+TGG	0.456202	6_3:-11836553	Msa0939730:CDS
CAATTGGTTCGTAGGCTTGA+AGG	0.460075	6_3:+11838586	None:intergenic
AAAGAATATGTTATTAACGT+TGG	0.468220	6_3:-11838198	Msa0939730:CDS
TGTGAAACCATTTGAAATAA+CGG	0.472819	6_3:+11838281	None:intergenic
TCCTTTGGTGCTATGTAATC+GGG	0.474625	6_3:+11836955	None:intergenic
AGTGAAAATCCAGGATCATC+AGG	0.475266	6_3:+11838060	None:intergenic
GAGTTTGTTGAGAGTGGCAT+TGG	0.479609	6_3:+11836903	None:intergenic
GATGATTTGAAGAGGTCCTT+TGG	0.480613	6_3:+11836940	None:intergenic
GTCTCTAGTGCAACGTTGGA+TGG	0.488829	6_3:+11838003	None:intergenic
TCATTAAACGCTGATGTTGA+AGG	0.490768	6_3:-11838237	Msa0939730:CDS
TTTGGAACAGAAACTGTTGT+TGG	0.494650	6_3:+11838459	None:intergenic
GTCTTCACCGTTTATATACA+AGG	0.499992	6_3:-11836778	Msa0939730:CDS
TATACACCACCTGATGATCC+TGG	0.501296	6_3:-11838069	Msa0939730:CDS
TTGGAACAGAAACTGTTGTT+GGG	0.504341	6_3:+11838460	None:intergenic
TGCCACAATTGAGGTTAAAA+CGG	0.504648	6_3:+11838562	None:intergenic
CACCGGCGCTAGTTATGTTC+GGG	0.506086	6_3:+11836806	None:intergenic
TTCCTGTTGTGCCACAATTG+AGG	0.506771	6_3:+11838553	None:intergenic
TGCTGGAGCGAATCCAGATC+CGG	0.507205	6_3:-11836536	Msa0939730:CDS
ATCATAACGGTTAAAACCGT+TGG	0.507788	6_3:+11838314	None:intergenic
TGGCTTGAGAATGTAGAGAA+AGG	0.509041	6_3:+11838784	None:intergenic
AAAACGGTCAATTGGTTCGT+AGG	0.516426	6_3:+11838578	None:intergenic
GCAGATTACAGGATCAAAGT+TGG	0.520573	6_3:-11837120	Msa0939730:intron
TTAACGTTGGTGATGATCAA+AGG	0.525996	6_3:-11838185	Msa0939730:CDS
ATTCTATATATTAAATAATG+AGG	0.527816	6_3:-11836433	Msa0939730:exon
TGTCCATGTTCTTTGTCCGT+CGG	0.529392	6_3:+11838524	None:intergenic
TTCGTCCTAGCAGACATATC+AGG	0.531061	6_3:-11837000	Msa0939730:CDS
TTCAAATCATCACGTGACTT+AGG	0.533902	6_3:-11836928	Msa0939730:CDS
TACCCTACTACTTATACCAA+CGG	0.537022	6_3:-11838330	Msa0939730:CDS
GACGGACAAAGAACATGGAC+AGG	0.537852	6_3:-11838522	Msa0939730:CDS
ATGTGATGAAGATGATGATA+AGG	0.540409	6_3:+11838755	None:intergenic
TATTCTTTACCTGTCAGTAC+AGG	0.541805	6_3:-11838378	Msa0939730:CDS
TCCAACGTTGCACTAGAGAC+AGG	0.541987	6_3:-11838000	Msa0939730:intron
ATGCATGCTTATGGTGGTAA+TGG	0.545332	6_3:-11836619	Msa0939730:CDS
AACCGTTGGTATAAGTAGTA+GGG	0.547927	6_3:+11838328	None:intergenic
TTGAAGGTGTAAGAGGGAGG+TGG	0.551545	6_3:+11838602	None:intergenic
TTGAGAATGTAGAGAAAGGG+GGG	0.552170	6_3:+11838788	None:intergenic
GGAGGTGGAAAAGTATAAGA+GGG	0.563249	6_3:+11838617	None:intergenic
TTGGATGGAATAGTATATGC+TGG	0.565567	6_3:+11838018	None:intergenic
GCTTGAGAATGTAGAGAAAG+GGG	0.567517	6_3:+11838786	None:intergenic
CCGGTTAAAGAGAAGAATAG+TGG	0.571765	6_3:-11836517	Msa0939730:CDS
CTACCGACGGACAAAGAACA+TGG	0.572671	6_3:-11838527	Msa0939730:CDS
GTTGATGAGTGTGTGTGTGG+TGG	0.578552	6_3:+11838694	None:intergenic
AATAGTATATGCTGGTATGA+TGG	0.580915	6_3:+11838026	None:intergenic
AATTTAGGACCTGTACTGAC+AGG	0.585386	6_3:+11838369	None:intergenic
CGTTTATATACAAGGAAATG+TGG	0.586760	6_3:-11836770	Msa0939730:CDS
CTTGTTGATGAGTGTGTGTG+TGG	0.590114	6_3:+11838691	None:intergenic
TCGTACCTGATATGTCTGCT+AGG	0.592628	6_3:+11836995	None:intergenic
GACCCCACAAGTGAAAATCC+AGG	0.594772	6_3:+11838051	None:intergenic
AACGGTGAAGACTCTATCAC+CGG	0.608502	6_3:+11836789	None:intergenic
ATAATATAGATCATCAGGCA+TGG	0.614322	6_3:+11838089	None:intergenic
ATTCAAATGCATGCTTATGG+TGG	0.617292	6_3:-11836625	Msa0939730:CDS
CAAACTCCTAAACCTAACTT+GGG	0.620904	6_3:-11836887	Msa0939730:CDS
CTTGAGAATGTAGAGAAAGG+GGG	0.621792	6_3:+11838787	None:intergenic
AGGACGAAGTCACGTGATGT+TGG	0.623751	6_3:+11837015	None:intergenic
ACCTGTCTCTAGTGCAACGT+TGG	0.625804	6_3:+11837999	None:intergenic
ACCCGATTACATAGCACCAA+AGG	0.630729	6_3:-11836956	Msa0939730:CDS
GACCCGAACATAACTAGCGC+CGG	0.631916	6_3:-11836808	Msa0939730:CDS
AGTATATGCTGGTATGATGG+TGG	0.641458	6_3:+11838029	None:intergenic
AGTCACGTGATGATTTGAAG+AGG	0.649942	6_3:+11836932	None:intergenic
GTAGGCTTGAAGGTGTAAGA+GGG	0.650988	6_3:+11838596	None:intergenic
ACAACAGGAAACTCTACCGA+CGG	0.654858	6_3:-11838540	Msa0939730:CDS
TCACCAAACATTCAAGACAC+AGG	0.655864	6_3:-11837084	Msa0939730:CDS
GGCTTGAAGGTGTAAGAGGG+AGG	0.658222	6_3:+11838599	None:intergenic
GAAAATCCAGGATCATCAGG+TGG	0.688372	6_3:+11838063	None:intergenic
TAGCAGACATATCAGGTACG+AGG	0.749651	6_3:-11836993	Msa0939730:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	CAAAATTCAATTAAAAAATT+TGG	+	chr6_3:11837546-11837565	None:intergenic	10.0%
!!!	AATTATTTCTATTATTATAG+TGG	+	chr6_3:11838751-11838770	None:intergenic	10.0%
!!	ATTCTATATATTAAATAATG+AGG	-	chr6_3:11838780-11838799	Msa0939730:five_prime_UTR	10.0%
!!	CAAAATTCAATTAAAAAATT+TGG	+	chr6_3:11837546-11837565	None:intergenic	10.0%
!!!	AATTATTTCTATTATTATAG+TGG	+	chr6_3:11838751-11838770	None:intergenic	10.0%
!!	ATTCTATATATTAAATAATG+AGG	-	chr6_3:11838780-11838799	Msa0939730:five_prime_UTR	10.0%
!!!	AATAACTATGGTTTTATTAA+TGG	-	chr6_3:11837087-11837106	Msa0939730:CDS	15.0%
!!	GTATTAAGAAAGAAAAAAAA+CGG	-	chr6_3:11837300-11837319	Msa0939730:intron	15.0%
!!	TATATGTTTATAGGATTTAA+AGG	+	chr6_3:11838003-11838022	None:intergenic	15.0%
!!!	AATAACTATGGTTTTATTAA+TGG	-	chr6_3:11837087-11837106	Msa0939730:CDS	15.0%
!!	GTATTAAGAAAGAAAAAAAA+CGG	-	chr6_3:11837300-11837319	Msa0939730:intron	15.0%
!!	TATATGTTTATAGGATTTAA+AGG	+	chr6_3:11838003-11838022	None:intergenic	15.0%
!!!	TTTTTTACCGTTATTTCAAA+TGG	-	chr6_3:11836925-11836944	Msa0939730:CDS	20.0%
!!	AAAGAATATGTTATTAACGT+TGG	-	chr6_3:11837015-11837034	Msa0939730:CDS	20.0%
!!	TTATTAGAATTTCCATTACT+TGG	+	chr6_3:11837072-11837091	None:intergenic	20.0%
!!	AATGGAAATTCTAATAACTA+TGG	-	chr6_3:11837075-11837094	Msa0939730:CDS	20.0%
!!	TCTTAATACAAATTACATAC+TGG	+	chr6_3:11837289-11837308	None:intergenic	20.0%
!!!	TAATCCTGGATTTTAATTAT+TGG	+	chr6_3:11837571-11837590	None:intergenic	20.0%
!!	ATTAGCTAGATTAATGATTA+TGG	-	chr6_3:11837635-11837654	Msa0939730:intron	20.0%
!!	TTTCTAATCCGTTTAAAAAT+GGG	+	chr6_3:11838623-11838642	None:intergenic	20.0%
!!	ATTTCTAATCCGTTTAAAAA+TGG	+	chr6_3:11838624-11838643	None:intergenic	20.0%
!!!	TTTTTTACCGTTATTTCAAA+TGG	-	chr6_3:11836925-11836944	Msa0939730:CDS	20.0%
!!	AAAGAATATGTTATTAACGT+TGG	-	chr6_3:11837015-11837034	Msa0939730:CDS	20.0%
!!	TTATTAGAATTTCCATTACT+TGG	+	chr6_3:11837072-11837091	None:intergenic	20.0%
!!	AATGGAAATTCTAATAACTA+TGG	-	chr6_3:11837075-11837094	Msa0939730:CDS	20.0%
!!	TCTTAATACAAATTACATAC+TGG	+	chr6_3:11837289-11837308	None:intergenic	20.0%
!!!	TAATCCTGGATTTTAATTAT+TGG	+	chr6_3:11837571-11837590	None:intergenic	20.0%
!!	ATTAGCTAGATTAATGATTA+TGG	-	chr6_3:11837635-11837654	Msa0939730:intron	20.0%
!!	TTTCTAATCCGTTTAAAAAT+GGG	+	chr6_3:11838623-11838642	None:intergenic	20.0%
!!	ATTTCTAATCCGTTTAAAAA+TGG	+	chr6_3:11838624-11838643	None:intergenic	20.0%
!!!	ATGGTTTTGAAGTTTATCAA+TGG	+	chr6_3:11836568-11836587	None:intergenic	25.0%
!!!	ACTTTGTTTATGGAAGATTT+TGG	+	chr6_3:11836775-11836794	None:intergenic	25.0%
!!	TGAATATGGAACTTTGTTTA+TGG	+	chr6_3:11836785-11836804	None:intergenic	25.0%
!!	TGTGAAACCATTTGAAATAA+CGG	+	chr6_3:11836935-11836954	None:intergenic	25.0%
!!!	AAATGGTTTCACACTTTTTA+AGG	-	chr6_3:11836942-11836961	Msa0939730:CDS	25.0%
!!!	TTGAGTTTTATTCCAAGTAA+TGG	-	chr6_3:11837057-11837076	Msa0939730:CDS	25.0%
!	AAAAACGGAAAATGCTAATA+TGG	-	chr6_3:11837315-11837334	Msa0939730:intron	25.0%
!	AAAACGGAAAATGCTAATAT+GGG	-	chr6_3:11837316-11837335	Msa0939730:intron	25.0%
!!!	AAGGAGTTGACATATTTTTT+GGG	+	chr6_3:11837486-11837505	None:intergenic	25.0%
!!!	TAAGGAGTTGACATATTTTT+TGG	+	chr6_3:11837487-11837506	None:intergenic	25.0%
!	TGATCCAATAATTAAAATCC+AGG	-	chr6_3:11837564-11837583	Msa0939730:intron	25.0%
!!	ATACTATTGTTATTGCTTGT+TGG	-	chr6_3:11837742-11837761	Msa0939730:intron	25.0%
!	GTATGAATAAGTGAAAATTG+CGG	-	chr6_3:11837906-11837925	Msa0939730:intron	25.0%
!	TATGAATAAGTGAAAATTGC+GGG	-	chr6_3:11837907-11837926	Msa0939730:intron	25.0%
!	ATATATAATAGGATGGCATT+AGG	+	chr6_3:11838026-11838045	None:intergenic	25.0%
!	AATGCCATCCTATTATATAT+TGG	-	chr6_3:11838026-11838045	Msa0939730:CDS	25.0%
!	GAATGCAACCAATATATAAT+AGG	+	chr6_3:11838037-11838056	None:intergenic	25.0%
!	CACATTTCCTTGTATATAAA+CGG	+	chr6_3:11838445-11838464	None:intergenic	25.0%
!	AAATGGACACAAAATCAAAA+AGG	-	chr6_3:11838489-11838508	Msa0939730:CDS	25.0%
!	TTACTATTACTTTCACTCTT+TGG	+	chr6_3:11838549-11838568	None:intergenic	25.0%
!	AAAATTCAAATGCATGCTTA+TGG	-	chr6_3:11838585-11838604	Msa0939730:CDS	25.0%
!!	ATTTTCAAAATCAGTGATGT+TGG	-	chr6_3:11838642-11838661	Msa0939730:CDS	25.0%
!!!	ATGGTTTTGAAGTTTATCAA+TGG	+	chr6_3:11836568-11836587	None:intergenic	25.0%
!!!	ACTTTGTTTATGGAAGATTT+TGG	+	chr6_3:11836775-11836794	None:intergenic	25.0%
!!	TGAATATGGAACTTTGTTTA+TGG	+	chr6_3:11836785-11836804	None:intergenic	25.0%
!!	TGTGAAACCATTTGAAATAA+CGG	+	chr6_3:11836935-11836954	None:intergenic	25.0%
!!!	AAATGGTTTCACACTTTTTA+AGG	-	chr6_3:11836942-11836961	Msa0939730:CDS	25.0%
!!!	TTGAGTTTTATTCCAAGTAA+TGG	-	chr6_3:11837057-11837076	Msa0939730:CDS	25.0%
!	AAAAACGGAAAATGCTAATA+TGG	-	chr6_3:11837315-11837334	Msa0939730:intron	25.0%
!	AAAACGGAAAATGCTAATAT+GGG	-	chr6_3:11837316-11837335	Msa0939730:intron	25.0%
!!!	AAGGAGTTGACATATTTTTT+GGG	+	chr6_3:11837486-11837505	None:intergenic	25.0%
!!!	TAAGGAGTTGACATATTTTT+TGG	+	chr6_3:11837487-11837506	None:intergenic	25.0%
!	TGATCCAATAATTAAAATCC+AGG	-	chr6_3:11837564-11837583	Msa0939730:intron	25.0%
!!	ATACTATTGTTATTGCTTGT+TGG	-	chr6_3:11837742-11837761	Msa0939730:intron	25.0%
!	GTATGAATAAGTGAAAATTG+CGG	-	chr6_3:11837906-11837925	Msa0939730:intron	25.0%
!	TATGAATAAGTGAAAATTGC+GGG	-	chr6_3:11837907-11837926	Msa0939730:intron	25.0%
!	ATATATAATAGGATGGCATT+AGG	+	chr6_3:11838026-11838045	None:intergenic	25.0%
!	AATGCCATCCTATTATATAT+TGG	-	chr6_3:11838026-11838045	Msa0939730:CDS	25.0%
!	GAATGCAACCAATATATAAT+AGG	+	chr6_3:11838037-11838056	None:intergenic	25.0%
!	CACATTTCCTTGTATATAAA+CGG	+	chr6_3:11838445-11838464	None:intergenic	25.0%
!	AAATGGACACAAAATCAAAA+AGG	-	chr6_3:11838489-11838508	Msa0939730:CDS	25.0%
!	TTACTATTACTTTCACTCTT+TGG	+	chr6_3:11838549-11838568	None:intergenic	25.0%
!	AAAATTCAAATGCATGCTTA+TGG	-	chr6_3:11838585-11838604	Msa0939730:CDS	25.0%
!!	ATTTTCAAAATCAGTGATGT+TGG	-	chr6_3:11838642-11838661	Msa0939730:CDS	25.0%
	AGATGATGATAAGGTTTCTT+TGG	+	chr6_3:11836452-11836471	None:intergenic	30.0%
	ATGTGATGAAGATGATGATA+AGG	+	chr6_3:11836461-11836480	None:intergenic	30.0%
	AAAAAAAGACGGAGGAATTT+AGG	+	chr6_3:11836862-11836881	None:intergenic	30.0%
	TAGTAGGGTAGAAAAAAAGA+CGG	+	chr6_3:11836873-11836892	None:intergenic	30.0%
!!	CGGTAAAAAAAGCATCATAA+CGG	+	chr6_3:11836915-11836934	None:intergenic	30.0%
	ATAATATAGATCATCAGGCA+TGG	+	chr6_3:11837127-11837146	None:intergenic	30.0%
	GGTGTATAATATAGATCATC+AGG	+	chr6_3:11837132-11837151	None:intergenic	30.0%
	AATAGTATATGCTGGTATGA+TGG	+	chr6_3:11837190-11837209	None:intergenic	30.0%
!	TAGTAGGATGTTTGTTAGTA+AGG	+	chr6_3:11837505-11837524	None:intergenic	30.0%
!	GAAACTCTAAGAATTAATCC+TGG	+	chr6_3:11837585-11837604	None:intergenic	30.0%
	GGTTCATGATAACTAAACTA+AGG	-	chr6_3:11837763-11837782	Msa0939730:intron	30.0%
	GGCATTAGGTATATGTTTAT+AGG	+	chr6_3:11838012-11838031	None:intergenic	30.0%
	GCAACCAATATATAATAGGA+TGG	+	chr6_3:11838033-11838052	None:intergenic	30.0%
!	TGATGTTGGTGTTCTTAAAT+AGG	+	chr6_3:11838187-11838206	None:intergenic	30.0%
	CGTTTATATACAAGGAAATG+TGG	-	chr6_3:11838443-11838462	Msa0939730:CDS	30.0%
!!!	AACAAGCTGATGTTTTGAAA+TGG	-	chr6_3:11838472-11838491	Msa0939730:CDS	30.0%
!	AAGCATGCATTTGAATTTTG+AGG	+	chr6_3:11838584-11838603	None:intergenic	30.0%
!!	AATGGTGACCCATTTTTAAA+CGG	-	chr6_3:11838612-11838631	Msa0939730:CDS	30.0%
	AGATGATGATAAGGTTTCTT+TGG	+	chr6_3:11836452-11836471	None:intergenic	30.0%
	ATGTGATGAAGATGATGATA+AGG	+	chr6_3:11836461-11836480	None:intergenic	30.0%
	AAAAAAAGACGGAGGAATTT+AGG	+	chr6_3:11836862-11836881	None:intergenic	30.0%
	TAGTAGGGTAGAAAAAAAGA+CGG	+	chr6_3:11836873-11836892	None:intergenic	30.0%
!!	CGGTAAAAAAAGCATCATAA+CGG	+	chr6_3:11836915-11836934	None:intergenic	30.0%
	ATAATATAGATCATCAGGCA+TGG	+	chr6_3:11837127-11837146	None:intergenic	30.0%
	GGTGTATAATATAGATCATC+AGG	+	chr6_3:11837132-11837151	None:intergenic	30.0%
	AATAGTATATGCTGGTATGA+TGG	+	chr6_3:11837190-11837209	None:intergenic	30.0%
!	TAGTAGGATGTTTGTTAGTA+AGG	+	chr6_3:11837505-11837524	None:intergenic	30.0%
!	GAAACTCTAAGAATTAATCC+TGG	+	chr6_3:11837585-11837604	None:intergenic	30.0%
	GGTTCATGATAACTAAACTA+AGG	-	chr6_3:11837763-11837782	Msa0939730:intron	30.0%
	GGCATTAGGTATATGTTTAT+AGG	+	chr6_3:11838012-11838031	None:intergenic	30.0%
	GCAACCAATATATAATAGGA+TGG	+	chr6_3:11838033-11838052	None:intergenic	30.0%
!	TGATGTTGGTGTTCTTAAAT+AGG	+	chr6_3:11838187-11838206	None:intergenic	30.0%
	CGTTTATATACAAGGAAATG+TGG	-	chr6_3:11838443-11838462	Msa0939730:CDS	30.0%
!!!	AACAAGCTGATGTTTTGAAA+TGG	-	chr6_3:11838472-11838491	Msa0939730:CDS	30.0%
!	AAGCATGCATTTGAATTTTG+AGG	+	chr6_3:11838584-11838603	None:intergenic	30.0%
!!	AATGGTGACCCATTTTTAAA+CGG	-	chr6_3:11838612-11838631	Msa0939730:CDS	30.0%
	GTATAAGAGGGTGATGATTA+TGG	+	chr6_3:11836587-11836606	None:intergenic	35.0%
	TTGAGGTTAAAACGGTCAAT+TGG	+	chr6_3:11836646-11836665	None:intergenic	35.0%
	TGCCACAATTGAGGTTAAAA+CGG	+	chr6_3:11836654-11836673	None:intergenic	35.0%
	TTGGAACAGAAACTGTTGTT+GGG	+	chr6_3:11836756-11836775	None:intergenic	35.0%
!	TTTGGAACAGAAACTGTTGT+TGG	+	chr6_3:11836757-11836776	None:intergenic	35.0%
	GATAAACGAGCTGTTGAATA+TGG	+	chr6_3:11836799-11836818	None:intergenic	35.0%
	TATTCTTTACCTGTCAGTAC+AGG	-	chr6_3:11836835-11836854	Msa0939730:CDS	35.0%
	TACCCTACTACTTATACCAA+CGG	-	chr6_3:11836883-11836902	Msa0939730:CDS	35.0%
	AACCGTTGGTATAAGTAGTA+GGG	+	chr6_3:11836888-11836907	None:intergenic	35.0%
	AAACCGTTGGTATAAGTAGT+AGG	+	chr6_3:11836889-11836908	None:intergenic	35.0%
	ATCATAACGGTTAAAACCGT+TGG	+	chr6_3:11836902-11836921	None:intergenic	35.0%
	TCATTAAACGCTGATGTTGA+AGG	-	chr6_3:11836976-11836995	Msa0939730:CDS	35.0%
!!	TTAACGTTGGTGATGATCAA+AGG	-	chr6_3:11837028-11837047	Msa0939730:CDS	35.0%
	TTGGATGGAATAGTATATGC+TGG	+	chr6_3:11837198-11837217	None:intergenic	35.0%
	TATGGGTCTTTATATGCCAT+CGG	-	chr6_3:11837333-11837352	Msa0939730:intron	35.0%
	GATACACACATTCATCTAGT+AGG	+	chr6_3:11837521-11837540	None:intergenic	35.0%
	TATACTCCATTGCAGATTAC+AGG	-	chr6_3:11838082-11838101	Msa0939730:CDS	35.0%
	TTTGATCCTGTAATCTGCAA+TGG	+	chr6_3:11838091-11838110	None:intergenic	35.0%
	TTCAAATCATCACGTGACTT+AGG	-	chr6_3:11838285-11838304	Msa0939730:CDS	35.0%
	ACAAACTCCTAAACCTAACT+TGG	-	chr6_3:11838325-11838344	Msa0939730:CDS	35.0%
	CAAACTCCTAAACCTAACTT+GGG	-	chr6_3:11838326-11838345	Msa0939730:CDS	35.0%
	GAAATTCCCAAGTTAGGTTT+AGG	+	chr6_3:11838335-11838354	None:intergenic	35.0%
	TAACTGGAAATTCCCAAGTT+AGG	+	chr6_3:11838341-11838360	None:intergenic	35.0%
	TGGGAATTTCCAGTTAATTC+TGG	-	chr6_3:11838345-11838364	Msa0939730:CDS	35.0%
	TAAGTGAAGCCAGAATTAAC+TGG	+	chr6_3:11838357-11838376	None:intergenic	35.0%
	GTCTTCACCGTTTATATACA+AGG	-	chr6_3:11838435-11838454	Msa0939730:CDS	35.0%
	ATTCAAATGCATGCTTATGG+TGG	-	chr6_3:11838588-11838607	Msa0939730:CDS	35.0%
	CCACTATTCTTCTCTTTAAC+CGG	+	chr6_3:11838699-11838718	None:intergenic	35.0%
	GTATAAGAGGGTGATGATTA+TGG	+	chr6_3:11836587-11836606	None:intergenic	35.0%
	TTGAGGTTAAAACGGTCAAT+TGG	+	chr6_3:11836646-11836665	None:intergenic	35.0%
	TGCCACAATTGAGGTTAAAA+CGG	+	chr6_3:11836654-11836673	None:intergenic	35.0%
	TTGGAACAGAAACTGTTGTT+GGG	+	chr6_3:11836756-11836775	None:intergenic	35.0%
!	TTTGGAACAGAAACTGTTGT+TGG	+	chr6_3:11836757-11836776	None:intergenic	35.0%
	GATAAACGAGCTGTTGAATA+TGG	+	chr6_3:11836799-11836818	None:intergenic	35.0%
	TATTCTTTACCTGTCAGTAC+AGG	-	chr6_3:11836835-11836854	Msa0939730:CDS	35.0%
	TACCCTACTACTTATACCAA+CGG	-	chr6_3:11836883-11836902	Msa0939730:CDS	35.0%
	AACCGTTGGTATAAGTAGTA+GGG	+	chr6_3:11836888-11836907	None:intergenic	35.0%
	AAACCGTTGGTATAAGTAGT+AGG	+	chr6_3:11836889-11836908	None:intergenic	35.0%
	ATCATAACGGTTAAAACCGT+TGG	+	chr6_3:11836902-11836921	None:intergenic	35.0%
	TCATTAAACGCTGATGTTGA+AGG	-	chr6_3:11836976-11836995	Msa0939730:CDS	35.0%
!!	TTAACGTTGGTGATGATCAA+AGG	-	chr6_3:11837028-11837047	Msa0939730:CDS	35.0%
	TTGGATGGAATAGTATATGC+TGG	+	chr6_3:11837198-11837217	None:intergenic	35.0%
	TATGGGTCTTTATATGCCAT+CGG	-	chr6_3:11837333-11837352	Msa0939730:intron	35.0%
	GATACACACATTCATCTAGT+AGG	+	chr6_3:11837521-11837540	None:intergenic	35.0%
	TATACTCCATTGCAGATTAC+AGG	-	chr6_3:11838082-11838101	Msa0939730:CDS	35.0%
	TTTGATCCTGTAATCTGCAA+TGG	+	chr6_3:11838091-11838110	None:intergenic	35.0%
	TTCAAATCATCACGTGACTT+AGG	-	chr6_3:11838285-11838304	Msa0939730:CDS	35.0%
	ACAAACTCCTAAACCTAACT+TGG	-	chr6_3:11838325-11838344	Msa0939730:CDS	35.0%
	CAAACTCCTAAACCTAACTT+GGG	-	chr6_3:11838326-11838345	Msa0939730:CDS	35.0%
	GAAATTCCCAAGTTAGGTTT+AGG	+	chr6_3:11838335-11838354	None:intergenic	35.0%
	TAACTGGAAATTCCCAAGTT+AGG	+	chr6_3:11838341-11838360	None:intergenic	35.0%
	TGGGAATTTCCAGTTAATTC+TGG	-	chr6_3:11838345-11838364	Msa0939730:CDS	35.0%
	TAAGTGAAGCCAGAATTAAC+TGG	+	chr6_3:11838357-11838376	None:intergenic	35.0%
	GTCTTCACCGTTTATATACA+AGG	-	chr6_3:11838435-11838454	Msa0939730:CDS	35.0%
	ATTCAAATGCATGCTTATGG+TGG	-	chr6_3:11838588-11838607	Msa0939730:CDS	35.0%
	CCACTATTCTTCTCTTTAAC+CGG	+	chr6_3:11838699-11838718	None:intergenic	35.0%
	TTGAGAATGTAGAGAAAGGG+GGG	+	chr6_3:11836428-11836447	None:intergenic	40.0%
	CTTGAGAATGTAGAGAAAGG+GGG	+	chr6_3:11836429-11836448	None:intergenic	40.0%
	GCTTGAGAATGTAGAGAAAG+GGG	+	chr6_3:11836430-11836449	None:intergenic	40.0%
	GGCTTGAGAATGTAGAGAAA+GGG	+	chr6_3:11836431-11836450	None:intergenic	40.0%
	TGGCTTGAGAATGTAGAGAA+AGG	+	chr6_3:11836432-11836451	None:intergenic	40.0%
!	GGAGGTGGAAAAGTATAAGA+GGG	+	chr6_3:11836599-11836618	None:intergenic	40.0%
!!	AAAACGGTCAATTGGTTCGT+AGG	+	chr6_3:11836638-11836657	None:intergenic	40.0%
!!	GACCGTTTTAACCTCAATTG+TGG	-	chr6_3:11836649-11836668	Msa0939730:CDS	40.0%
!	AATTTAGGACCTGTACTGAC+AGG	+	chr6_3:11836847-11836866	None:intergenic	40.0%
	TAGGGTAGAAAAAAAGACGG+AGG	+	chr6_3:11836870-11836889	None:intergenic	40.0%
	AGTGAAAATCCAGGATCATC+AGG	+	chr6_3:11837156-11837175	None:intergenic	40.0%
!	TGATCCTGGATTTTCACTTG+TGG	-	chr6_3:11837158-11837177	Msa0939730:intron	40.0%
!	GATCCTGGATTTTCACTTGT+GGG	-	chr6_3:11837159-11837178	Msa0939730:intron	40.0%
!	ATCCTGGATTTTCACTTGTG+GGG	-	chr6_3:11837160-11837179	Msa0939730:intron	40.0%
	AGTATATGCTGGTATGATGG+TGG	+	chr6_3:11837187-11837206	None:intergenic	40.0%
	ATGGGTCTTTATATGCCATC+GGG	-	chr6_3:11837334-11837353	Msa0939730:intron	40.0%
	ATGTTTGATGTGTCGAAACG+CGG	+	chr6_3:11837940-11837959	None:intergenic	40.0%
	AACTAAGTTGCACGCACAAA+TGG	-	chr6_3:11837973-11837992	Msa0939730:intron	40.0%
	GCAGATTACAGGATCAAAGT+TGG	-	chr6_3:11838093-11838112	Msa0939730:CDS	40.0%
	TCACCAAACATTCAAGACAC+AGG	-	chr6_3:11838129-11838148	Msa0939730:CDS	40.0%
	ATGCCTGTGTCTTGAATGTT+TGG	+	chr6_3:11838135-11838154	None:intergenic	40.0%
!!	TCCTTTGGTGCTATGTAATC+GGG	+	chr6_3:11838261-11838280	None:intergenic	40.0%
!!	GTCCTTTGGTGCTATGTAAT+CGG	+	chr6_3:11838262-11838281	None:intergenic	40.0%
	GATGATTTGAAGAGGTCCTT+TGG	+	chr6_3:11838276-11838295	None:intergenic	40.0%
	AGTCACGTGATGATTTGAAG+AGG	+	chr6_3:11838284-11838303	None:intergenic	40.0%
!!	GTTTAGGAGTTTGTTGAGAG+TGG	+	chr6_3:11838319-11838338	None:intergenic	40.0%
	ATGCATGCTTATGGTGGTAA+TGG	-	chr6_3:11838594-11838613	Msa0939730:CDS	40.0%
	TTCTTCTCTTTAACCGGATC+TGG	+	chr6_3:11838693-11838712	None:intergenic	40.0%
	CCGGTTAAAGAGAAGAATAG+TGG	-	chr6_3:11838696-11838715	Msa0939730:five_prime_UTR	40.0%
	TTGAGAATGTAGAGAAAGGG+GGG	+	chr6_3:11836428-11836447	None:intergenic	40.0%
	CTTGAGAATGTAGAGAAAGG+GGG	+	chr6_3:11836429-11836448	None:intergenic	40.0%
	GCTTGAGAATGTAGAGAAAG+GGG	+	chr6_3:11836430-11836449	None:intergenic	40.0%
	GGCTTGAGAATGTAGAGAAA+GGG	+	chr6_3:11836431-11836450	None:intergenic	40.0%
	TGGCTTGAGAATGTAGAGAA+AGG	+	chr6_3:11836432-11836451	None:intergenic	40.0%
!	GGAGGTGGAAAAGTATAAGA+GGG	+	chr6_3:11836599-11836618	None:intergenic	40.0%
!!	AAAACGGTCAATTGGTTCGT+AGG	+	chr6_3:11836638-11836657	None:intergenic	40.0%
!!	GACCGTTTTAACCTCAATTG+TGG	-	chr6_3:11836649-11836668	Msa0939730:CDS	40.0%
!	AATTTAGGACCTGTACTGAC+AGG	+	chr6_3:11836847-11836866	None:intergenic	40.0%
	TAGGGTAGAAAAAAAGACGG+AGG	+	chr6_3:11836870-11836889	None:intergenic	40.0%
	AGTGAAAATCCAGGATCATC+AGG	+	chr6_3:11837156-11837175	None:intergenic	40.0%
!	TGATCCTGGATTTTCACTTG+TGG	-	chr6_3:11837158-11837177	Msa0939730:intron	40.0%
!	GATCCTGGATTTTCACTTGT+GGG	-	chr6_3:11837159-11837178	Msa0939730:intron	40.0%
!	ATCCTGGATTTTCACTTGTG+GGG	-	chr6_3:11837160-11837179	Msa0939730:intron	40.0%
	AGTATATGCTGGTATGATGG+TGG	+	chr6_3:11837187-11837206	None:intergenic	40.0%
	ATGGGTCTTTATATGCCATC+GGG	-	chr6_3:11837334-11837353	Msa0939730:intron	40.0%
	ATGTTTGATGTGTCGAAACG+CGG	+	chr6_3:11837940-11837959	None:intergenic	40.0%
	AACTAAGTTGCACGCACAAA+TGG	-	chr6_3:11837973-11837992	Msa0939730:intron	40.0%
	GCAGATTACAGGATCAAAGT+TGG	-	chr6_3:11838093-11838112	Msa0939730:CDS	40.0%
	TCACCAAACATTCAAGACAC+AGG	-	chr6_3:11838129-11838148	Msa0939730:CDS	40.0%
	ATGCCTGTGTCTTGAATGTT+TGG	+	chr6_3:11838135-11838154	None:intergenic	40.0%
!!	TCCTTTGGTGCTATGTAATC+GGG	+	chr6_3:11838261-11838280	None:intergenic	40.0%
!!	GTCCTTTGGTGCTATGTAAT+CGG	+	chr6_3:11838262-11838281	None:intergenic	40.0%
	GATGATTTGAAGAGGTCCTT+TGG	+	chr6_3:11838276-11838295	None:intergenic	40.0%
	AGTCACGTGATGATTTGAAG+AGG	+	chr6_3:11838284-11838303	None:intergenic	40.0%
!!	GTTTAGGAGTTTGTTGAGAG+TGG	+	chr6_3:11838319-11838338	None:intergenic	40.0%
	ATGCATGCTTATGGTGGTAA+TGG	-	chr6_3:11838594-11838613	Msa0939730:CDS	40.0%
	TTCTTCTCTTTAACCGGATC+TGG	+	chr6_3:11838693-11838712	None:intergenic	40.0%
	CCGGTTAAAGAGAAGAATAG+TGG	-	chr6_3:11838696-11838715	Msa0939730:five_prime_UTR	40.0%
!	CTTGTTGATGAGTGTGTGTG+TGG	+	chr6_3:11836525-11836544	None:intergenic	45.0%
!	GGGAGGTGGAAAAGTATAAG+AGG	+	chr6_3:11836600-11836619	None:intergenic	45.0%
!	GTAGGCTTGAAGGTGTAAGA+GGG	+	chr6_3:11836620-11836639	None:intergenic	45.0%
!!	CAATTGGTTCGTAGGCTTGA+AGG	+	chr6_3:11836630-11836649	None:intergenic	45.0%
	AACCTCAATTGTGGCACAAC+AGG	-	chr6_3:11836658-11836677	Msa0939730:CDS	45.0%
	TTCCTGTTGTGCCACAATTG+AGG	+	chr6_3:11836663-11836682	None:intergenic	45.0%
	ACAACAGGAAACTCTACCGA+CGG	-	chr6_3:11836673-11836692	Msa0939730:CDS	45.0%
	TGTCCATGTTCTTTGTCCGT+CGG	+	chr6_3:11836692-11836711	None:intergenic	45.0%
	TATACACCACCTGATGATCC+TGG	-	chr6_3:11837144-11837163	Msa0939730:intron	45.0%
	GAAAATCCAGGATCATCAGG+TGG	+	chr6_3:11837153-11837172	None:intergenic	45.0%
	GTGTCTTAACATGTACCCGA+TGG	+	chr6_3:11837352-11837371	None:intergenic	45.0%
	TTCGTCCTAGCAGACATATC+AGG	-	chr6_3:11838213-11838232	Msa0939730:CDS	45.0%
	TCGTACCTGATATGTCTGCT+AGG	+	chr6_3:11838221-11838240	None:intergenic	45.0%
	TAGCAGACATATCAGGTACG+AGG	-	chr6_3:11838220-11838239	Msa0939730:CDS	45.0%
	ACCCGATTACATAGCACCAA+AGG	-	chr6_3:11838257-11838276	Msa0939730:CDS	45.0%
!!	GAGTTTGTTGAGAGTGGCAT+TGG	+	chr6_3:11838313-11838332	None:intergenic	45.0%
	CTGGCTTCACTTACTTCATC+AGG	-	chr6_3:11838364-11838383	Msa0939730:CDS	45.0%
	AACGGTGAAGACTCTATCAC+CGG	+	chr6_3:11838427-11838446	None:intergenic	45.0%
!!	GTTGGTTCGAAGAATCTTGC+TGG	-	chr6_3:11838660-11838679	Msa0939730:exon	45.0%
!	CTTGTTGATGAGTGTGTGTG+TGG	+	chr6_3:11836525-11836544	None:intergenic	45.0%
!	GGGAGGTGGAAAAGTATAAG+AGG	+	chr6_3:11836600-11836619	None:intergenic	45.0%
!	GTAGGCTTGAAGGTGTAAGA+GGG	+	chr6_3:11836620-11836639	None:intergenic	45.0%
!!	CAATTGGTTCGTAGGCTTGA+AGG	+	chr6_3:11836630-11836649	None:intergenic	45.0%
	AACCTCAATTGTGGCACAAC+AGG	-	chr6_3:11836658-11836677	Msa0939730:CDS	45.0%
	TTCCTGTTGTGCCACAATTG+AGG	+	chr6_3:11836663-11836682	None:intergenic	45.0%
	ACAACAGGAAACTCTACCGA+CGG	-	chr6_3:11836673-11836692	Msa0939730:CDS	45.0%
	TGTCCATGTTCTTTGTCCGT+CGG	+	chr6_3:11836692-11836711	None:intergenic	45.0%
	TATACACCACCTGATGATCC+TGG	-	chr6_3:11837144-11837163	Msa0939730:intron	45.0%
	GAAAATCCAGGATCATCAGG+TGG	+	chr6_3:11837153-11837172	None:intergenic	45.0%
	GTGTCTTAACATGTACCCGA+TGG	+	chr6_3:11837352-11837371	None:intergenic	45.0%
	TTCGTCCTAGCAGACATATC+AGG	-	chr6_3:11838213-11838232	Msa0939730:CDS	45.0%
	TCGTACCTGATATGTCTGCT+AGG	+	chr6_3:11838221-11838240	None:intergenic	45.0%
	TAGCAGACATATCAGGTACG+AGG	-	chr6_3:11838220-11838239	Msa0939730:CDS	45.0%
	ACCCGATTACATAGCACCAA+AGG	-	chr6_3:11838257-11838276	Msa0939730:CDS	45.0%
!!	GAGTTTGTTGAGAGTGGCAT+TGG	+	chr6_3:11838313-11838332	None:intergenic	45.0%
	CTGGCTTCACTTACTTCATC+AGG	-	chr6_3:11838364-11838383	Msa0939730:CDS	45.0%
	AACGGTGAAGACTCTATCAC+CGG	+	chr6_3:11838427-11838446	None:intergenic	45.0%
!!	GTTGGTTCGAAGAATCTTGC+TGG	-	chr6_3:11838660-11838679	Msa0939730:exon	45.0%
	GAGAAAGGGGGGAAGTTCTT+CGG	+	chr6_3:11836417-11836436	None:intergenic	50.0%
!	GTTGATGAGTGTGTGTGTGG+TGG	+	chr6_3:11836522-11836541	None:intergenic	50.0%
!	TTGAAGGTGTAAGAGGGAGG+TGG	+	chr6_3:11836614-11836633	None:intergenic	50.0%
!	CGTAGGCTTGAAGGTGTAAG+AGG	+	chr6_3:11836621-11836640	None:intergenic	50.0%
	CTACCGACGGACAAAGAACA+TGG	-	chr6_3:11836686-11836705	Msa0939730:CDS	50.0%
	GACGGACAAAGAACATGGAC+AGG	-	chr6_3:11836691-11836710	Msa0939730:CDS	50.0%
	GACCCCACAAGTGAAAATCC+AGG	+	chr6_3:11837165-11837184	None:intergenic	50.0%
	GTCTCTAGTGCAACGTTGGA+TGG	+	chr6_3:11837213-11837232	None:intergenic	50.0%
	TCCAACGTTGCACTAGAGAC+AGG	-	chr6_3:11837213-11837232	Msa0939730:intron	50.0%
	ACCTGTCTCTAGTGCAACGT+TGG	+	chr6_3:11837217-11837236	None:intergenic	50.0%
	ACACAGGCATGCTCAGAAAC+TGG	-	chr6_3:11838145-11838164	Msa0939730:CDS	50.0%
	AGGACGAAGTCACGTGATGT+TGG	+	chr6_3:11838201-11838220	None:intergenic	50.0%
	TCACCGGCGCTAGTTATGTT+CGG	+	chr6_3:11838411-11838430	None:intergenic	50.0%
	GAGAAAGGGGGGAAGTTCTT+CGG	+	chr6_3:11836417-11836436	None:intergenic	50.0%
!	GTTGATGAGTGTGTGTGTGG+TGG	+	chr6_3:11836522-11836541	None:intergenic	50.0%
!	TTGAAGGTGTAAGAGGGAGG+TGG	+	chr6_3:11836614-11836633	None:intergenic	50.0%
!	CGTAGGCTTGAAGGTGTAAG+AGG	+	chr6_3:11836621-11836640	None:intergenic	50.0%
	CTACCGACGGACAAAGAACA+TGG	-	chr6_3:11836686-11836705	Msa0939730:CDS	50.0%
	GACGGACAAAGAACATGGAC+AGG	-	chr6_3:11836691-11836710	Msa0939730:CDS	50.0%
	GACCCCACAAGTGAAAATCC+AGG	+	chr6_3:11837165-11837184	None:intergenic	50.0%
	GTCTCTAGTGCAACGTTGGA+TGG	+	chr6_3:11837213-11837232	None:intergenic	50.0%
	TCCAACGTTGCACTAGAGAC+AGG	-	chr6_3:11837213-11837232	Msa0939730:intron	50.0%
	ACCTGTCTCTAGTGCAACGT+TGG	+	chr6_3:11837217-11837236	None:intergenic	50.0%
	ACACAGGCATGCTCAGAAAC+TGG	-	chr6_3:11838145-11838164	Msa0939730:CDS	50.0%
	AGGACGAAGTCACGTGATGT+TGG	+	chr6_3:11838201-11838220	None:intergenic	50.0%
	TCACCGGCGCTAGTTATGTT+CGG	+	chr6_3:11838411-11838430	None:intergenic	50.0%
!	GGCTTGAAGGTGTAAGAGGG+AGG	+	chr6_3:11836617-11836636	None:intergenic	55.0%
	GACCCGAACATAACTAGCGC+CGG	-	chr6_3:11838405-11838424	Msa0939730:CDS	55.0%
	CACCGGCGCTAGTTATGTTC+GGG	+	chr6_3:11838410-11838429	None:intergenic	55.0%
	TGCTGGAGCGAATCCAGATC+CGG	-	chr6_3:11838677-11838696	Msa0939730:five_prime_UTR	55.0%
!	GGCTTGAAGGTGTAAGAGGG+AGG	+	chr6_3:11836617-11836636	None:intergenic	55.0%
	GACCCGAACATAACTAGCGC+CGG	-	chr6_3:11838405-11838424	Msa0939730:CDS	55.0%
	CACCGGCGCTAGTTATGTTC+GGG	+	chr6_3:11838410-11838429	None:intergenic	55.0%
	TGCTGGAGCGAATCCAGATC+CGG	-	chr6_3:11838677-11838696	Msa0939730:five_prime_UTR	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr6_3	gene	11836410	11838825	11836410	ID=Msa0939730;Name=Msa0939730
chr6_3	mRNA	11836410	11838825	11836410	ID=Msa0939730-mRNA-1;Parent=Msa0939730;Name=Msa0939730-mRNA-1;_AED=0.14;_eAED=0.14;_QI=149\|1\|1\|1\|1\|1\|2\|28\|458
chr6_3	exon	11836410	11837138	11836410	ID=Msa0939730-mRNA-1:exon:3883;Parent=Msa0939730-mRNA-1
chr6_3	exon	11838001	11838825	11838001	ID=Msa0939730-mRNA-1:exon:3882;Parent=Msa0939730-mRNA-1
chr6_3	five_prime_UTR	11838677	11838825	11838677	ID=Msa0939730-mRNA-1:five_prime_utr;Parent=Msa0939730-mRNA-1
chr6_3	CDS	11838001	11838676	11838001	ID=Msa0939730-mRNA-1:cds;Parent=Msa0939730-mRNA-1
chr6_3	CDS	11836438	11837138	11836438	ID=Msa0939730-mRNA-1:cds;Parent=Msa0939730-mRNA-1
chr6_3	three_prime_UTR	11836410	11836437	11836410	ID=Msa0939730-mRNA-1:three_prime_utr;Parent=Msa0939730-mRNA-1

Gene Sequence

>Msa0939730

ATGAAACCATTGATAAACTTCAAAACCATAATCATCACCCTCTTATACTTTTCCACCTCCCTCTTACACCTTCAAGCCTACGAACCAATTGACCGTTTTAACCTCAATTGTGGCACAACAGGAAACTCTACCGACGGACAAAGAACATGGACAGGAGACATAAACTCAAAACTTTTGTCATCATTACAAAACAACCCAACAACAGTTTCTGTTCCAAAATCTTCCATAAACAAAGTTCCATATTCAACAGCTCGTTTATCACACTCAATATTCAACTATTCTTTACCTGTCAGTACAGGTCCTAAATTCCTCCGTCTTTTTTTCTACCCTACTACTTATACCAACGGTTTTAACCGTTATGATGCTTTTTTTACCGTTATTTCAAATGGTTTCACACTTTTTAAGGATTTTTATGCTTCATTAAACGCTGATGTTGAAGGTGTTGATACTATATTGAAAGAATATGTTATTAACGTTGGTGATGATCAAAGGCTTGATTTGAGTTTTATTCCAAGTAATGGAAATTCTAATAACTATGGTTTTATTAATGGAATTGAAGTCTTATCCATGCCTGATGATCTATATTATACACCACCTGATGATCCTGGATTTTCACTTGTGGGGTCCACCATCATACCAGCATATACTATTCCATCCAACGTTGCACTAGAGACAGATTACAGGATCAAAGTTGGAGTGCAAGAAAACTCACCAAACATTCAAGACACAGGCATGCTCAGAAACTGGAACATCAATGACACAACCTATTTAAGAACACCAACATCACGTGACTTCGTCCTAGCAGACATATCAGGTACGAGGAACATAACTGTAACACCCGATTACATAGCACCAAAGGACCTCTTCAAATCATCACGTGACTTAGGAACCAATGCCACTCTCAACAAACTCCTAAACCTAACTTGGGAATTTCCAGTTAATTCTGGCTTCACTTACTTCATCAGGCTTCATTTTTGTGAACTCGACCCGAACATAACTAGCGCCGGTGATAGAGTCTTCACCGTTTATATACAAGGAAATGTGGCTGAAGAACAAGCTGATGTTTTGAAATGGACACAAAATCAAAAAGGTCTTGCAGTGCAACGAAACTACGCAGTTTTGATTCCAAAGAGTGAAAGTAATAGTAACAAAAAAGTTAACCTCAAAATTCAAATGCATGCTTATGGTGGTAATGGTGACCCATTTTTAAACGGATTAGAAATTTTCAAAATCAGTGATGTTGGTTCGAAGAATCTTGCTGGAGCGAATCCAGATCCGGTTAAAGAGAAGAATAGTGGAATGACAAAAATTATACTCAAAATGCATACCACTATAATAATAGAAATAATTGTAATCTATATTCTATATATTAAATAA

Protein sequence

>Msa0939730

MKPLINFKTIIITLLYFSTSLLHLQAYEPIDRFNLNCGTTGNSTDGQRTWTGDINSKLLSSLQNNPTTVSVPKSSINKVPYSTARLSHSIFNYSLPVSTGPKFLRLFFYPTTYTNGFNRYDAFFTVISNGFTLFKDFYASLNADVEGVDTILKEYVINVGDDQRLDLSFIPSNGNSNNYGFINGIEVLSMPDDLYYTPPDDPGFSLVGSTIIPAYTIPSNVALETDYRIKVGVQENSPNIQDTGMLRNWNINDTTYLRTPTSRDFVLADISGTRNITVTPDYIAPKDLFKSSRDLGTNATLNKLLNLTWEFPVNSGFTYFIRLHFCELDPNITSAGDRVFTVYIQGNVAEEQADVLKWTQNQKGLAVQRNYAVLIPKSESNSNKKVNLKIQMHAYGGNGDPFLNGLEIFKISDVGSKNLAGANPDPVKEKNSGMTKIILKMHTTIIIEIIVIYILYIK*