AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1463890


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1463890 MtrunA17_Chr5g0396951 99.013 304 3 0 1 304 1 304 0.0 625
Msa1463890 MtrunA17_Chr4g0049381 71.803 305 84 2 1 304 1 304 1.49e-165 462
Msa1463890 MtrunA17_Chr7g0275331 69.836 305 90 2 1 304 1 304 2.49e-165 462
Msa1463890 MtrunA17_Chr2g0298101 67.241 290 93 1 17 304 14 303 9.33e-153 430
Msa1463890 MtrunA17_Chr6g0449291 54.138 290 130 3 15 304 3 289 3.16e-115 334
Msa1463890 MtrunA17_Chr4g0000451 65.882 170 56 1 137 304 6 175 4.18e-80 241
Msa1463890 MtrunA17_Chr4g0000441 68.421 114 36 0 22 135 33 146 1.72e-55 177
Msa1463890 MtrunA17_Chr5g0404381 33.218 289 174 7 15 301 41 312 4.54e-43 150
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1463890 AT4G23730.1 69.608 306 91 2 1 304 1 306 1.17e-165 462
Msa1463890 AT3G61610.1 74.483 290 73 1 16 304 15 304 6.78e-165 461
Msa1463890 AT3G61610.2 74.483 290 73 1 16 304 9 298 7.51e-165 461
Msa1463890 AT4G23730.3 68.269 312 91 3 1 304 1 312 6.02e-163 456
Msa1463890 AT4G23730.2 73.881 268 68 2 39 304 4 271 1.66e-154 433
Msa1463890 AT5G57330.1 67.698 291 92 1 16 304 9 299 2.90e-154 434
Msa1463890 AT3G01590.1 60.000 285 112 2 20 304 8 290 6.35e-130 372
Msa1463890 AT3G01590.2 60.000 285 112 2 20 304 8 290 6.35e-130 372
Msa1463890 AT5G14500.1 57.586 290 121 2 15 304 3 290 8.63e-130 372
Msa1463890 AT5G14500.2 53.016 315 121 3 15 304 3 315 1.41e-123 357
Msa1463890 AT4G25900.1 51.042 288 136 2 16 303 32 314 4.78e-112 327
Msa1463890 AT5G66530.4 34.021 291 171 9 13 300 6 278 1.41e-44 153
Msa1463890 AT5G66530.1 34.021 291 171 9 13 300 34 306 3.06e-44 153
Msa1463890 AT5G66530.2 34.021 291 171 9 13 300 34 306 3.06e-44 153
Msa1463890 AT5G66530.3 34.021 291 171 9 13 300 34 306 3.06e-44 153

Find 136 sgRNAs with CRISPR-Local

Find 231 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAAAGTCAATAGTGGATTT+TGG 0.129984 tig0043738:-5759 Msa1463890:CDS
CTCTTTGTATCTCTTGATTT+TGG 0.153081 tig0043738:-8021 Msa1463890:five_prime_UTR
AACCTTAATAAAGCTTTAAA+TGG 0.190531 tig0043738:+8616 Msa1463890:intergenic
GATTATGGACCTTTCATTTC+AGG 0.210499 tig0043738:+8653 Msa1463890:intergenic
ATTCCTCCTCGTACTGGTTT+TGG 0.222742 tig0043738:+7165 Msa1463890:intergenic
GTCAACTGGGTCGTTTATTC+TGG 0.237336 tig0043738:-8520 Msa1463890:five_prime_UTR
GACAGTGAAGTGAGGGTAGA+AGG 0.250795 tig0043738:-6242 Msa1463890:intron
ACAAAATATTGAGGATAAAA+TGG 0.260033 tig0043738:+8172 Msa1463890:intergenic
CTCCATTTAAAGCTTTATTA+AGG 0.263109 tig0043738:-8618 Msa1463890:five_prime_UTR
GAGGAAGACTTGGTGGATTA+TGG 0.293107 tig0043738:+8638 Msa1463890:intergenic
GTTGTAGTTAACTTTATAAA+AGG 0.296743 tig0043738:-5329 Msa1463890:three_prime_UTR
CACATATAGTTGGAAGAAAT+TGG 0.297432 tig0043738:-7957 Msa1463890:five_prime_UTR
TAATCTGTAAACCGTTAGTT+AGG 0.313002 tig0043738:+8737 Msa1463890:intergenic
GCCTGCTACCACTGTTGTGC+TGG 0.326166 tig0043738:+8684 Msa1463890:intergenic
CAACTTTGATGTGACAGAAT+TGG 0.327754 tig0043738:+7850 Msa1463890:intergenic
AAACAATAACCAATGCTTGA+TGG 0.340522 tig0043738:+5569 Msa1463890:intergenic
TACAACTCTGAATTGTCAAC+TGG 0.351270 tig0043738:-8534 Msa1463890:five_prime_UTR
GATTTGCAAGGAATAAGATA+TGG 0.355587 tig0043738:-6995 Msa1463890:CDS
AAAGGAGTATTTGTAGGAGT+TGG 0.357575 tig0043738:+5278 Msa1463890:intergenic
TTCATATTAAATTCCACAAT+AGG 0.361643 tig0043738:-8439 Msa1463890:five_prime_UTR
TAATATGAAAATTGTTACTT+TGG 0.362563 tig0043738:+8453 Msa1463890:intergenic
CAGATAATAACTGAATTATT+AGG 0.363282 tig0043738:-8068 Msa1463890:five_prime_UTR
TTACACATTGAATAGTTGTT+TGG 0.364398 tig0043738:-5800 Msa1463890:intron
ACGGAGGGCAAGTTCTTTCA+TGG 0.380303 tig0043738:-7475 Msa1463890:CDS
AAGGCTTGCCATTGACATTC+CGG 0.382320 tig0043738:+6489 Msa1463890:intergenic
TACGGACCTGATATCTGATA+TGG 0.394110 tig0043738:+6433 Msa1463890:intergenic
TAAATTTGAATTGAATGGTT+TGG 0.395726 tig0043738:+8406 Msa1463890:intergenic
ATATGAAAATCTTATTGAAA+AGG 0.401088 tig0043738:+8110 Msa1463890:intergenic
TGAAGCGTTCCTTCTGGTAT+AGG 0.403091 tig0043738:+6192 Msa1463890:intergenic
CTGAAGACGATATGAAGATA+TGG 0.407969 tig0043738:-6896 Msa1463890:CDS
CGGCCGGTCCATTCTTCTCC+CGG 0.408566 tig0043738:+5669 Msa1463890:intergenic
TGTGTTAAATTTGAATTGAA+TGG 0.410209 tig0043738:+8401 Msa1463890:intergenic
GTTCTGTGAAGCGTTCCTTC+TGG 0.411774 tig0043738:+6186 Msa1463890:intergenic
TTATCTCGATTCTAGCAGTA+TGG 0.412644 tig0043738:-6015 Msa1463890:CDS
TGAAGTGAGGGTAGAAGGGT+TGG 0.418375 tig0043738:-6237 Msa1463890:CDS
ATTACCTGTGGAAAACAGAT+TGG 0.421320 tig0043738:+7141 Msa1463890:intergenic
GAAAGACACTTACCAACATC+TGG 0.431173 tig0043738:+5936 Msa1463890:intergenic
AAGGAGTATTTGTAGGAGTT+GGG 0.433989 tig0043738:+5279 Msa1463890:intergenic
ATTTCTCCATATCAGATATC+AGG 0.439981 tig0043738:-6439 Msa1463890:intron
CAAGACAAAGGAGTATTTGT+AGG 0.445320 tig0043738:+5272 Msa1463890:intergenic
GTTTCGCCTAAGGGTCTGTT+TGG 0.445507 tig0043738:-6546 Msa1463890:CDS
CAATTCTGTCACATCAAAGT+TGG 0.449100 tig0043738:-7849 Msa1463890:five_prime_UTR
TGTTTCTAAATTCTAAGTAA+TGG 0.450840 tig0043738:+7785 Msa1463890:intergenic
ACTTTGAGAGTAACAATTCA+AGG 0.452042 tig0043738:+7729 Msa1463890:intergenic
ATTTCTAGATCACATATAGT+TGG 0.454310 tig0043738:-7967 Msa1463890:five_prime_UTR
GAATAGTTGTTTGGAATCCC+TGG 0.459977 tig0043738:-5791 Msa1463890:intron
CCATTTGAATCCGTGGGCAG+TGG 0.460101 tig0043738:+6951 Msa1463890:intergenic
AGAAGAATGGACCGGCCGCT+TGG 0.461091 tig0043738:-5664 Msa1463890:CDS
GTTGTTCTTCGAAACGTTCG+AGG 0.461265 tig0043738:-7617 Msa1463890:CDS
AAATCCGATAACCTTAAAAC+CGG 0.461715 tig0043738:-5688 Msa1463890:CDS
TATGAAAATCTTATTGAAAA+GGG 0.465417 tig0043738:+8111 Msa1463890:intergenic
CCTTAAAACCGGGAGAAGAA+TGG 0.474210 tig0043738:-5677 Msa1463890:CDS
TTACCTGTGGAAAACAGATT+GGG 0.476013 tig0043738:+7142 Msa1463890:intergenic
ATTGGGATTCCTCCTCGTAC+TGG 0.478898 tig0043738:+7159 Msa1463890:intergenic
AACATCAGTTGAAGTTATCA+AGG 0.479030 tig0043738:-7660 Msa1463890:CDS
GAATCCGTGGGCAGTGGTGG+AGG 0.481987 tig0043738:+6957 Msa1463890:intergenic
TTGAAGTCAAGTCAAGTAGA+AGG 0.484710 tig0043738:+5627 Msa1463890:intergenic
CAGCTTCGAGTTTCGCCTAA+GGG 0.487911 tig0043738:-6555 Msa1463890:CDS
TGGACTTTCAACACCTATTG+TGG 0.488496 tig0043738:+8426 Msa1463890:intergenic
TCAGCTTCGAGTTTCGCCTA+AGG 0.489943 tig0043738:-6556 Msa1463890:intron
AATCTGTAAACCGTTAGTTA+GGG 0.490789 tig0043738:+8738 Msa1463890:intergenic
GCTTTAAATGGAGGAAGACT+TGG 0.491945 tig0043738:+8628 Msa1463890:intergenic
ACAGTGAAGTGAGGGTAGAA+GGG 0.492013 tig0043738:-6241 Msa1463890:intron
CCTTCTGGTATAGGTTATCC+AGG 0.493007 tig0043738:+6201 Msa1463890:intergenic
TCGTGAAGATTGAAAATGAA+AGG 0.494067 tig0043738:+7934 Msa1463890:intergenic
TGCTTTAACATTTGAATCTG+AGG 0.495159 tig0043738:-6156 Msa1463890:intron
GGGGTCATACAACACTCAAA+AGG 0.495972 tig0043738:+8758 Msa1463890:intergenic
TTAAATGGAGGAAGACTTGG+TGG 0.503443 tig0043738:+8631 Msa1463890:intergenic
ACATATTAGTGATGTATATG+AGG 0.506124 tig0043738:-5451 Msa1463890:three_prime_UTR
GTTATTGTTCACTAGTACCA+AGG 0.506527 tig0043738:-7432 Msa1463890:intron
TGAATATGATATCTCGCATC+CGG 0.512657 tig0043738:-6508 Msa1463890:CDS
ATTTGCAAGGAATAAGATAT+GGG 0.514716 tig0043738:-6994 Msa1463890:CDS
ATGCAAAGCATACATAAAAG+AGG 0.514998 tig0043738:+5386 Msa1463890:intergenic
CCCAGCACAACAGTGGTAGC+AGG 0.515068 tig0043738:-8685 Msa1463890:five_prime_UTR
TCTCGCATCCGGAATGTCAA+TGG 0.518066 tig0043738:-6497 Msa1463890:CDS
TTCAGGTTAGCTTGCACGGA+GGG 0.519016 tig0043738:-7490 Msa1463890:intron
TTTGAATCCGTGGGCAGTGG+TGG 0.520143 tig0043738:+6954 Msa1463890:intergenic
CCTGCTACCACTGTTGTGCT+GGG 0.521769 tig0043738:+8685 Msa1463890:intergenic
ACAATTTCATCTACATGACT+TGG 0.525178 tig0043738:+5350 Msa1463890:intergenic
AATAGTTGTTTGGAATCCCT+GGG 0.525696 tig0043738:-5790 Msa1463890:intron
CCACTGCCCACGGATTCAAA+TGG 0.526642 tig0043738:-6951 Msa1463890:CDS
TTGTCACAAGAAAGTTGTCA+TGG 0.526878 tig0043738:-7900 Msa1463890:five_prime_UTR
CTTAATAAAGCTTTAAATGG+AGG 0.530126 tig0043738:+8619 Msa1463890:intergenic
GGGTCATACAACACTCAAAA+GGG 0.530920 tig0043738:+8759 Msa1463890:intergenic
CATGTTGCTCTAGTGTTCCA+CGG 0.532159 tig0043738:+7018 Msa1463890:intergenic
AAACAGTCACATAATAATGA+AGG 0.533995 tig0043738:+8289 Msa1463890:intergenic
CCTTTCATTTCAGGTCAACA+AGG 0.535521 tig0043738:+8662 Msa1463890:intergenic
ATAAATAAACCATCAAGCAT+TGG 0.537410 tig0043738:-5578 Msa1463890:three_prime_UTR
TTTCTTCTCATGATCTAGAA+CGG 0.537918 tig0043738:+5989 Msa1463890:intergenic
ATCTTCATATCGTCTTCAGA+TGG 0.538140 tig0043738:+6900 Msa1463890:intergenic
AGGGTCTGTTTGGCAGCAGA+TGG 0.540406 tig0043738:-6536 Msa1463890:CDS
AACAGAAAGCTCCAAGCGGC+CGG 0.541122 tig0043738:+5653 Msa1463890:intergenic
TGCGTGGATGGTGCAGCAGT+TGG 0.542462 tig0043738:-5711 Msa1463890:CDS
GTTGGAGACTCTTGACTACC+TGG 0.542710 tig0043738:-6219 Msa1463890:CDS
AAGCAAATGCTCTGCGTGGA+TGG 0.557893 tig0043738:-5723 Msa1463890:CDS
ATGTGTATATACTTGAAAAG+TGG 0.559564 tig0043738:+5470 Msa1463890:intergenic
AACTGAATTATTAGGCCTAA+CGG 0.567176 tig0043738:-8060 Msa1463890:five_prime_UTR
GATCAATAACTAAGCGGCAA+AGG 0.568982 tig0043738:+8365 Msa1463890:intergenic
TACTTAGAATTTAGAAACAG+AGG 0.571105 tig0043738:-7781 Msa1463890:five_prime_UTR
GAAATATGTATGAAATGCAA+AGG 0.575295 tig0043738:+6457 Msa1463890:intergenic
GAATCAAGAACAAAATATTG+AGG 0.576370 tig0043738:+8163 Msa1463890:intergenic
TGTCACAAGAAAGTTGTCAT+GGG 0.578918 tig0043738:-7899 Msa1463890:five_prime_UTR
GATCTTTCAAACCCTTAAAG+CGG 0.583628 tig0043738:+8558 Msa1463890:intergenic
AAGGAAGGTCTTCCAGATGT+TGG 0.585878 tig0043738:-5948 Msa1463890:intron
CTGCTGCCAAACAGACCCTT+AGG 0.589405 tig0043738:+6540 Msa1463890:intergenic
CGATTATTGACAGTGAAGTG+AGG 0.590022 tig0043738:-6250 Msa1463890:intron
AAATCCTCCACCACTGCCCA+CGG 0.590093 tig0043738:-6961 Msa1463890:CDS
AAGGAACGCTTCACAGAACA+AGG 0.595906 tig0043738:-6182 Msa1463890:CDS
AAACCGGGAGAAGAATGGAC+CGG 0.609197 tig0043738:-5672 Msa1463890:CDS
CCTTGTTGACCTGAAATGAA+AGG 0.609996 tig0043738:-8662 Msa1463890:five_prime_UTR
TGAGCAATATCAATAAGAAG+AGG 0.610630 tig0043738:-5518 Msa1463890:three_prime_UTR
GTTGTATGACCCCTAACTAA+CGG 0.618883 tig0043738:-8748 Msa1463890:five_prime_UTR
ACTGTTGTGCTGGGATTGAG+AGG 0.624297 tig0043738:+8694 Msa1463890:intergenic
AATGCAAAGGAGAAACTGAA+AGG 0.627775 tig0043738:+6470 Msa1463890:intergenic
GATTATTGACAGTGAAGTGA+GGG 0.633522 tig0043738:-6249 Msa1463890:intron
ACGAACATTTGTGATACGAA+AGG 0.635723 tig0043738:-5967 Msa1463890:CDS
ATATGAAGATATGGCCACAT+AGG 0.635993 tig0043738:-6887 Msa1463890:intron
CCTGGATAACCTATACCAGA+AGG 0.640312 tig0043738:-6201 Msa1463890:CDS
ATCTGTAAACCGTTAGTTAG+GGG 0.642974 tig0043738:+8739 Msa1463890:intergenic
CGTGGAACACTAGAGCAACA+TGG 0.643884 tig0043738:-7017 Msa1463890:CDS
TAAAGCGTGTCGCACCTATG+TGG 0.645929 tig0043738:+6873 Msa1463890:intergenic
ATATGTGATCAATAACTAAG+CGG 0.652155 tig0043738:+8359 Msa1463890:intergenic
TAGAGCAACATGGATTTGCA+AGG 0.656362 tig0043738:-7007 Msa1463890:CDS
TTTCAGGTTAGCTTGCACGG+AGG 0.662583 tig0043738:-7491 Msa1463890:intron
TCTCAATCCCAGCACAACAG+TGG 0.662845 tig0043738:-8692 Msa1463890:five_prime_UTR
ACATTTGTGATACGAAAGGA+AGG 0.663497 tig0043738:-5963 Msa1463890:CDS
CGTTCGAGGAGCTTCAGCAA+CGG 0.664112 tig0043738:-7603 Msa1463890:intron
CTTTCATGGAAAACAGAACG+CGG 0.670837 tig0043738:-7461 Msa1463890:CDS
ACAACTCTGAATTGTCAACT+GGG 0.674618 tig0043738:-8533 Msa1463890:five_prime_UTR
TGCGAGATATCATATTCAGA+CGG 0.674803 tig0043738:+6513 Msa1463890:intergenic
AATCCGATAACCTTAAAACC+GGG 0.679316 tig0043738:-5687 Msa1463890:CDS
GTACAAGCAAATGCTCTGCG+TGG 0.681422 tig0043738:-5727 Msa1463890:CDS
CTGTTGTGCTGGGATTGAGA+GGG 0.725932 tig0043738:+8695 Msa1463890:intergenic
CCTCCAAAACCAGTACGAGG+AGG 0.735431 tig0043738:-7168 Msa1463890:CDS
GTACAACAGAAAGCTCCAAG+CGG 0.740861 tig0043738:+5649 Msa1463890:intergenic
ACTCCTCCAAAACCAGTACG+AGG 0.754632 tig0043738:-7171 Msa1463890:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATGTCTTTTTTATTTTAATA+TGG + tig0043738:5821-5840 Msa1463890:intergenic 10.0%
!!! AAATATACTTGTTATTATAT+AGG + tig0043738:7409-7428 Msa1463890:intergenic 10.0%
!! TTTATAAAATTTAAAAACGA+AGG + tig0043738:7728-7747 Msa1463890:intergenic 10.0%
!!! AATTTAACTTGATAAATATA+AGG + tig0043738:7947-7966 Msa1463890:intergenic 10.0%
!!! TAATATGAAAATTGTTACTT+TGG + tig0043738:5595-5614 Msa1463890:intergenic 15.0%
!!! TTTTGAAGAATTAATGAAAT+GGG + tig0043738:5793-5812 Msa1463890:intergenic 15.0%
!!! ATTTTGAAGAATTAATGAAA+TGG + tig0043738:5794-5813 Msa1463890:intergenic 15.0%
!!! CTTTTTTATTTTAATATGGA+CGG + tig0043738:5817-5836 Msa1463890:intergenic 15.0%
!! TATGAAAATCTTATTGAAAA+GGG + tig0043738:5937-5956 Msa1463890:intergenic 15.0%
!! ATATGAAAATCTTATTGAAA+AGG + tig0043738:5938-5957 Msa1463890:intergenic 15.0%
!!! TACAAAGAGTTATATATTTT+TGG + tig0043738:6013-6032 Msa1463890:intergenic 15.0%
!!! ACATTTTACAAACAAAATTA+AGG + tig0043738:6807-6826 Msa1463890:intergenic 15.0%
!! ATATAGATAGATAGATAATA+AGG - tig0043738:6973-6992 Msa1463890:CDS 15.0%
!!! AACCTTAATAAAGCTTTAAA+TGG + tig0043738:5432-5451 Msa1463890:intergenic 20.0%
!! TTCATATTAAATTCCACAAT+AGG - tig0043738:5606-5625 Msa1463890:three_prime_UTR 20.0%
!! TAAATTTGAATTGAATGGTT+TGG + tig0043738:5642-5661 Msa1463890:intergenic 20.0%
!! TGTGTTAAATTTGAATTGAA+TGG + tig0043738:5647-5666 Msa1463890:intergenic 20.0%
!! TTCAAAAAAGAAAACAATGA+AGG + tig0043738:5725-5744 Msa1463890:intergenic 20.0%
!! ACAAAATATTGAGGATAAAA+TGG + tig0043738:5876-5895 Msa1463890:intergenic 20.0%
!! CAGATAATAACTGAATTATT+AGG - tig0043738:5977-5996 Msa1463890:CDS 20.0%
!!! ATAACTGATAAATCAGTTTT+TGG - tig0043738:6234-6253 Msa1463890:CDS 20.0%
!!! TGTTTCTAAATTCTAAGTAA+TGG + tig0043738:6263-6282 Msa1463890:intergenic 20.0%
!! CAAACAAAATTAAGGTTAAT+TGG + tig0043738:6799-6818 Msa1463890:intergenic 20.0%
!! TATATAGATTTCTGTAATTC+AGG + tig0043738:6958-6977 Msa1463890:intergenic 20.0%
!!! AGCATTTTACTTATGAATTT+GGG - tig0043738:7223-7242 Msa1463890:intron 20.0%
!! GCTATATATAGAACTATTAA+AGG - tig0043738:7279-7298 Msa1463890:intron 20.0%
!!! CAAGATCAATTATTTTATCA+AGG - tig0043738:7663-7682 Msa1463890:CDS 20.0%
!! TAACTTGATAAATATAAGGA+TGG + tig0043738:7943-7962 Msa1463890:intergenic 20.0%
!! CAAAATCTAAGTACTATAAT+TGG - tig0043738:8158-8177 Msa1463890:five_prime_UTR 20.0%
!! GTTGTAGTTAACTTTATAAA+AGG - tig0043738:8716-8735 Msa1463890:five_prime_UTR 20.0%
!! AAAAAAAAGAAAGATTTGAC+AGG - tig0043738:8741-8760 Msa1463890:five_prime_UTR 20.0%
!!! CTTAATAAAGCTTTAAATGG+AGG + tig0043738:5429-5448 Msa1463890:intergenic 25.0%
!!! CTCCATTTAAAGCTTTATTA+AGG - tig0043738:5427-5446 Msa1463890:three_prime_UTR 25.0%
!! TAACTTTTAAACCGCTTTAA+GGG - tig0043738:5476-5495 Msa1463890:three_prime_UTR 25.0%
! ATATGTGATCAATAACTAAG+CGG + tig0043738:5689-5708 Msa1463890:intergenic 25.0%
! AAACAGTCACATAATAATGA+AGG + tig0043738:5759-5778 Msa1463890:intergenic 25.0%
!!! TTGTCGATTTTTTGTAATTG+AGG + tig0043738:5849-5868 Msa1463890:intergenic 25.0%
! GAATCAAGAACAAAATATTG+AGG + tig0043738:5885-5904 Msa1463890:intergenic 25.0%
!! ATTTCTAGATCACATATAGT+TGG - tig0043738:6078-6097 Msa1463890:intron 25.0%
! TACTTAGAATTTAGAAACAG+AGG - tig0043738:6264-6283 Msa1463890:intron 25.0%
!!! TTTTTTGAGATGAATCATTC+TGG - tig0043738:6341-6360 Msa1463890:intron 25.0%
! AGATAGATAGATAATAAGGT+TGG - tig0043738:6977-6996 Msa1463890:CDS 25.0%
!!! TGGTGTGATTTATTTTAGTT+TGG - tig0043738:7001-7020 Msa1463890:CDS 25.0%
! ATTTGCAAGGAATAAGATAT+GGG - tig0043738:7051-7070 Msa1463890:intron 25.0%
! CAAATTCATAAGTAAAATGC+TGG + tig0043738:7224-7243 Msa1463890:intergenic 25.0%
!! CAGCATTTTACTTATGAATT+TGG - tig0043738:7222-7241 Msa1463890:intron 25.0%
!! GCATTTTACTTATGAATTTG+GGG - tig0043738:7224-7243 Msa1463890:intron 25.0%
!! CATTTTACTTATGAATTTGG+GGG - tig0043738:7225-7244 Msa1463890:intron 25.0%
! AATAACTGAGATAAATTGAG+AGG - tig0043738:7257-7276 Msa1463890:intron 25.0%
! TAGAACTATTAAAGGACTAT+TGG - tig0043738:7287-7306 Msa1463890:intron 25.0%
!! TTGTTATTATATAGGAACTG+GGG + tig0043738:7401-7420 Msa1463890:intergenic 25.0%
!!! CTTGTTATTATATAGGAACT+GGG + tig0043738:7402-7421 Msa1463890:intergenic 25.0%
!!! ACTTGTTATTATATAGGAAC+TGG + tig0043738:7403-7422 Msa1463890:intergenic 25.0%
! GAAATATGTATGAAATGCAA+AGG + tig0043738:7591-7610 Msa1463890:intergenic 25.0%
!!! ATAGTACTTAGATTTTGAGT+CGG + tig0043738:8155-8174 Msa1463890:intergenic 25.0%
! ATTCAATGTGTAAATTGACA+TGG + tig0043738:8238-8257 Msa1463890:intergenic 25.0%
! TTACACATTGAATAGTTGTT+TGG - tig0043738:8245-8264 Msa1463890:five_prime_UTR 25.0%
! GAAAAAATCAAAGTCAATAG+TGG - tig0043738:8279-8298 Msa1463890:five_prime_UTR 25.0%
! ATAAATAAACCATCAAGCAT+TGG - tig0043738:8467-8486 Msa1463890:five_prime_UTR 25.0%
!! TGATATTGCTCATGATTTTT+AGG + tig0043738:8519-8538 Msa1463890:intergenic 25.0%
! ATGTGTATATACTTGAAAAG+TGG + tig0043738:8578-8597 Msa1463890:intergenic 25.0%
! ACATATTAGTGATGTATATG+AGG - tig0043738:8594-8613 Msa1463890:five_prime_UTR 25.0%
AATCTGTAAACCGTTAGTTA+GGG + tig0043738:5310-5329 Msa1463890:intergenic 30.0%
TAATCTGTAAACCGTTAGTT+AGG + tig0043738:5311-5330 Msa1463890:intergenic 30.0%
! CTAACTTTTAAACCGCTTTA+AGG - tig0043738:5475-5494 Msa1463890:three_prime_UTR 30.0%
!! ATGTGACTGTTTCTTTTAAC+TGG - tig0043738:5767-5786 Msa1463890:CDS 30.0%
AACTGAATTATTAGGCCTAA+CGG - tig0043738:5985-6004 Msa1463890:CDS 30.0%
!!! TATATATTTTTGGCACCGTT+AGG + tig0043738:6003-6022 Msa1463890:intergenic 30.0%
! CTCTTTGTATCTCTTGATTT+TGG - tig0043738:6024-6043 Msa1463890:CDS 30.0%
CACATATAGTTGGAAGAAAT+TGG - tig0043738:6088-6107 Msa1463890:intron 30.0%
TCGTGAAGATTGAAAATGAA+AGG + tig0043738:6114-6133 Msa1463890:intergenic 30.0%
! ACTTTGAGAGTAACAATTCA+AGG + tig0043738:6319-6338 Msa1463890:intergenic 30.0%
AACATCAGTTGAAGTTATCA+AGG - tig0043738:6385-6404 Msa1463890:intron 30.0%
GAAGTTATCAAGGACAAAAA+TGG - tig0043738:6395-6414 Msa1463890:intron 30.0%
! TCTACCCTTTTGAATTTGAT+TGG - tig0043738:6508-6527 Msa1463890:CDS 30.0%
AGCACCAATCAAATTCAAAA+GGG + tig0043738:6515-6534 Msa1463890:intergenic 30.0%
TAGCACCAATCAAATTCAAA+AGG + tig0043738:6516-6535 Msa1463890:intergenic 30.0%
CAAAAAAACCTCATTTACCT+TGG + tig0043738:6633-6652 Msa1463890:intergenic 30.0%
! TATATGTGATAGTGATTCGT+AGG - tig0043738:6754-6773 Msa1463890:intron 30.0%
ATTTCTCTCTCTTTCCAATT+AGG - tig0043738:6843-6862 Msa1463890:intron 30.0%
! CTACTATCTAAAATTACCTG+TGG + tig0043738:6919-6938 Msa1463890:intergenic 30.0%
! AGATAGATAATAAGGTTGGT+TGG - tig0043738:6981-7000 Msa1463890:CDS 30.0%
!!! TTATTTTAGTTTGGAAACCG+TGG - tig0043738:7010-7029 Msa1463890:CDS 30.0%
GATTTGCAAGGAATAAGATA+TGG - tig0043738:7050-7069 Msa1463890:intron 30.0%
!! GCGATTCATTTTTCTTTGTA+AGG + tig0043738:7322-7341 Msa1463890:intergenic 30.0%
ATCTTGAGAATTGAGATTGT+TGG - tig0043738:7434-7453 Msa1463890:CDS 30.0%
ATTTCTCCATATCAGATATC+AGG - tig0043738:7606-7625 Msa1463890:CDS 30.0%
!! TTATCTTGAAAGTGTTGGAA+TGG + tig0043738:7640-7659 Msa1463890:intergenic 30.0%
! TGATCTTATCTTGAAAGTGT+TGG + tig0043738:7645-7664 Msa1463890:intergenic 30.0%
TCAATAATCGGCAAAAGTTA+AGG + tig0043738:7785-7804 Msa1463890:intergenic 30.0%
TGCTTTAACATTTGAATCTG+AGG - tig0043738:7889-7908 Msa1463890:five_prime_UTR 30.0%
! GCATGTTGGTAAAATTTCAA+GGG + tig0043738:7979-7998 Msa1463890:intergenic 30.0%
! AGCATGTTGGTAAAATTTCA+AGG + tig0043738:7980-7999 Msa1463890:intergenic 30.0%
! GAAATTTTACCAACATGCTA+AGG - tig0043738:7981-8000 Msa1463890:five_prime_UTR 30.0%
TTTCTTCTCATGATCTAGAA+CGG + tig0043738:8059-8078 Msa1463890:intergenic 30.0%
AATGTGTAAATTGACATGGA+TGG + tig0043738:8234-8253 Msa1463890:intergenic 30.0%
!!! TCAAAGTCAATAGTGGATTT+TGG - tig0043738:8286-8305 Msa1463890:five_prime_UTR 30.0%
!!! CAAAGTCAATAGTGGATTTT+GGG - tig0043738:8287-8306 Msa1463890:five_prime_UTR 30.0%
!!! AAAGTCAATAGTGGATTTTG+GGG - tig0043738:8288-8307 Msa1463890:five_prime_UTR 30.0%
AAATCCGATAACCTTAAAAC+CGG - tig0043738:8357-8376 Msa1463890:five_prime_UTR 30.0%
AAACAATAACCAATGCTTGA+TGG + tig0043738:8479-8498 Msa1463890:intergenic 30.0%
TGAGCAATATCAATAAGAAG+AGG - tig0043738:8527-8546 Msa1463890:five_prime_UTR 30.0%
ATGCAAAGCATACATAAAAG+AGG + tig0043738:8662-8681 Msa1463890:intergenic 30.0%
ACAATTTCATCTACATGACT+TGG + tig0043738:8698-8717 Msa1463890:intergenic 30.0%
ATCTGTAAACCGTTAGTTAG+GGG + tig0043738:5309-5328 Msa1463890:intergenic 35.0%
GATTATGGACCTTTCATTTC+AGG + tig0043738:5395-5414 Msa1463890:intergenic 35.0%
GATCTTTCAAACCCTTAAAG+CGG + tig0043738:5490-5509 Msa1463890:intergenic 35.0%
TACAACTCTGAATTGTCAAC+TGG - tig0043738:5511-5530 Msa1463890:three_prime_UTR 35.0%
ACAACTCTGAATTGTCAACT+GGG - tig0043738:5512-5531 Msa1463890:three_prime_UTR 35.0%
TTGTCACAAGAAAGTTGTCA+TGG - tig0043738:6145-6164 Msa1463890:intron 35.0%
TGTCACAAGAAAGTTGTCAT+GGG - tig0043738:6146-6165 Msa1463890:intron 35.0%
CAACTTTGATGTGACAGAAT+TGG + tig0043738:6198-6217 Msa1463890:intergenic 35.0%
CAATTCTGTCACATCAAAGT+TGG - tig0043738:6196-6215 Msa1463890:CDS 35.0%
CAAATTCAAAAGGGTAGATG+CGG + tig0043738:6506-6525 Msa1463890:intergenic 35.0%
GTTATTGTTCACTAGTACCA+AGG - tig0043738:6613-6632 Msa1463890:intron 35.0%
AGTGCTACATAGGAAATAAC+TGG + tig0043738:6658-6677 Msa1463890:intergenic 35.0%
TTACCTGTGGAAAACAGATT+GGG + tig0043738:6906-6925 Msa1463890:intergenic 35.0%
ATTACCTGTGGAAAACAGAT+TGG + tig0043738:6907-6926 Msa1463890:intergenic 35.0%
ATCTTCATATCGTCTTCAGA+TGG + tig0043738:7148-7167 Msa1463890:intergenic 35.0%
CTGAAGACGATATGAAGATA+TGG - tig0043738:7149-7168 Msa1463890:CDS 35.0%
ATATGAAGATATGGCCACAT+AGG - tig0043738:7158-7177 Msa1463890:CDS 35.0%
! GTATCTAGCTACATGCTTTT+GGG + tig0043738:7362-7381 Msa1463890:intergenic 35.0%
TGCGAGATATCATATTCAGA+CGG + tig0043738:7535-7554 Msa1463890:intergenic 35.0%
TGAATATGATATCTCGCATC+CGG - tig0043738:7537-7556 Msa1463890:intron 35.0%
AATGCAAAGGAGAAACTGAA+AGG + tig0043738:7578-7597 Msa1463890:intergenic 35.0%
CTCACTTCACTGTCAATAAT+CGG + tig0043738:7797-7816 Msa1463890:intergenic 35.0%
GATTATTGACAGTGAAGTGA+GGG - tig0043738:7796-7815 Msa1463890:five_prime_UTR 35.0%
! TAACATTTGAATCTGAGGTG+AGG - tig0043738:7894-7913 Msa1463890:five_prime_UTR 35.0%
CAAATAAGACCTTAGCATGT+TGG + tig0043738:7993-8012 Msa1463890:intergenic 35.0%
!! GCTAAGGTCTTATTTGTGTT+AGG - tig0043738:7997-8016 Msa1463890:five_prime_UTR 35.0%
!! AAGGTCTTATTTGTGTTAGG+TGG - tig0043738:8000-8019 Msa1463890:five_prime_UTR 35.0%
TTATCTCGATTCTAGCAGTA+TGG - tig0043738:8030-8049 Msa1463890:five_prime_UTR 35.0%
ACGAACATTTGTGATACGAA+AGG - tig0043738:8078-8097 Msa1463890:five_prime_UTR 35.0%
ACATTTGTGATACGAAAGGA+AGG - tig0043738:8082-8101 Msa1463890:five_prime_UTR 35.0%
! AATAGTTGTTTGGAATCCCT+GGG - tig0043738:8255-8274 Msa1463890:five_prime_UTR 35.0%
!!! GACTTTGATTTTTTCTCCCA+GGG + tig0043738:8274-8293 Msa1463890:intergenic 35.0%
!!! TGACTTTGATTTTTTCTCCC+AGG + tig0043738:8275-8294 Msa1463890:intergenic 35.0%
AATCCGATAACCTTAAAACC+GGG - tig0043738:8358-8377 Msa1463890:five_prime_UTR 35.0%
TTGAAGTCAAGTCAAGTAGA+AGG + tig0043738:8421-8440 Msa1463890:intergenic 35.0%
GGGTCATACAACACTCAAAA+GGG + tig0043738:5289-5308 None:intergenic 40.0%
GTTGTATGACCCCTAACTAA+CGG - tig0043738:5297-5316 Msa1463890:three_prime_UTR 40.0%
! CCTTTCATTTCAGGTCAACA+AGG + tig0043738:5386-5405 Msa1463890:intergenic 40.0%
CCTTGTTGACCTGAAATGAA+AGG - tig0043738:5383-5402 Msa1463890:three_prime_UTR 40.0%
TTAAATGGAGGAAGACTTGG+TGG + tig0043738:5417-5436 Msa1463890:intergenic 40.0%
! GCTTTAAATGGAGGAAGACT+TGG + tig0043738:5420-5439 Msa1463890:intergenic 40.0%
TGGACTTTCAACACCTATTG+TGG + tig0043738:5622-5641 Msa1463890:intergenic 40.0%
GATCAATAACTAAGCGGCAA+AGG + tig0043738:5683-5702 Msa1463890:intergenic 40.0%
CTGAAAAAGTCACACACACA+AGG + tig0043738:6540-6559 Msa1463890:intergenic 40.0%
!! CTTGTGTGTGTGACTTTTTC+AGG - tig0043738:6538-6557 Msa1463890:CDS 40.0%
!!! CTTTTTCAGGTTAGCTTGCA+CGG - tig0043738:6551-6570 Msa1463890:CDS 40.0%
CTTTCATGGAAAACAGAACG+CGG - tig0043738:6584-6603 Msa1463890:intron 40.0%
CACTAGTACCAAGGTAAATG+AGG - tig0043738:6622-6641 Msa1463890:intron 40.0%
! GCACTGACACTTCGAATTAA+AGG - tig0043738:6673-6692 Msa1463890:intron 40.0%
! CTTCGAATTAAAGGCATGTC+CGG - tig0043738:6682-6701 Msa1463890:intron 40.0%
ACACCAATCATAGAAGTGAC+CGG + tig0043738:6704-6723 Msa1463890:intergenic 40.0%
ATCAGACACAACACTGATAC+TGG + tig0043738:6735-6754 Msa1463890:intergenic 40.0%
!!! TGGTTTTGGAGGAGTATAGA+CGG + tig0043738:6869-6888 Msa1463890:intergenic 40.0%
! AATCCCAATCTGTTTTCCAC+AGG - tig0043738:6900-6919 Msa1463890:CDS 40.0%
TAGAGCAACATGGATTTGCA+AGG - tig0043738:7038-7057 Msa1463890:intron 40.0%
! GCTTTTCCATTTGAATCCGT+GGG + tig0043738:7103-7122 Msa1463890:intergenic 40.0%
! AGCTTTTCCATTTGAATCCG+TGG + tig0043738:7104-7123 Msa1463890:intergenic 40.0%
AAAATGAATCGCATCCAGAG+AGG - tig0043738:7330-7349 Msa1463890:intron 40.0%
! GGTATCTAGCTACATGCTTT+TGG + tig0043738:7363-7382 Msa1463890:intergenic 40.0%
TACGGACCTGATATCTGATA+TGG + tig0043738:7615-7634 Msa1463890:intergenic 40.0%
!! GAAAGTGTTGGAATGGCATA+CGG + tig0043738:7633-7652 Msa1463890:intergenic 40.0%
CGATTATTGACAGTGAAGTG+AGG - tig0043738:7795-7814 Msa1463890:five_prime_UTR 40.0%
GGTAAAATTTCAAGGGTTGC+AGG + tig0043738:7972-7991 Msa1463890:intergenic 40.0%
GAAAGACACTTACCAACATC+TGG + tig0043738:8112-8131 Msa1463890:intergenic 40.0%
! GAATAGTTGTTTGGAATCCC+TGG - tig0043738:8254-8273 Msa1463890:five_prime_UTR 40.0%
!!! TCTCCCGGTTTTAAGGTTAT+CGG + tig0043738:8364-8383 Msa1463890:intergenic 40.0%
GGGGTCATACAACACTCAAA+AGG + tig0043738:5290-5309 None:intergenic 45.0%
!! GAGGAAGACTTGGTGGATTA+TGG + tig0043738:5410-5429 Msa1463890:intergenic 45.0%
GTCAACTGGGTCGTTTATTC+TGG - tig0043738:5525-5544 Msa1463890:three_prime_UTR 45.0%
GTTGTTCTTCGAAACGTTCG+AGG - tig0043738:6428-6447 Msa1463890:intron 45.0%
! TCGAAGTGTCAGTGCTACAT+AGG + tig0043738:6668-6687 Msa1463890:intergenic 45.0%
TGTCCGGTCACTTCTATGAT+TGG - tig0043738:6698-6717 Msa1463890:intron 45.0%
! AGGAGTATAGACGGCCTAAT+TGG + tig0043738:6860-6879 Msa1463890:intergenic 45.0%
!!! ATTCCTCCTCGTACTGGTTT+TGG + tig0043738:6883-6902 Msa1463890:intergenic 45.0%
CATGTTGCTCTAGTGTTCCA+CGG + tig0043738:7030-7049 Msa1463890:intergenic 45.0%
!!! CTTTTGGGATTTCTCCTCTC+TGG + tig0043738:7347-7366 Msa1463890:intergenic 45.0%
! ACTGGGGTATCTAGCTAACT+GGG + tig0043738:7385-7404 Msa1463890:intergenic 45.0%
! AACTGGGGTATCTAGCTAAC+TGG + tig0043738:7386-7405 Msa1463890:intergenic 45.0%
AAGGCTTGCCATTGACATTC+CGG + tig0043738:7559-7578 Msa1463890:intergenic 45.0%
ACAGTGAAGTGAGGGTAGAA+GGG - tig0043738:7804-7823 Msa1463890:five_prime_UTR 45.0%
CCTTCTGGTATAGGTTATCC+AGG + tig0043738:7847-7866 Msa1463890:intergenic 45.0%
CCTGGATAACCTATACCAGA+AGG - tig0043738:7844-7863 Msa1463890:five_prime_UTR 45.0%
! TGAAGCGTTCCTTCTGGTAT+AGG + tig0043738:7856-7875 Msa1463890:intergenic 45.0%
AAGGAACGCTTCACAGAACA+AGG - tig0043738:7863-7882 Msa1463890:five_prime_UTR 45.0%
AAGGAAGGTCTTCCAGATGT+TGG - tig0043738:8097-8116 Msa1463890:five_prime_UTR 45.0%
! CCATTCTTCTCCCGGTTTTA+AGG + tig0043738:8371-8390 Msa1463890:intergenic 45.0%
CCTTAAAACCGGGAGAAGAA+TGG - tig0043738:8368-8387 Msa1463890:five_prime_UTR 45.0%
GTACAACAGAAAGCTCCAAG+CGG + tig0043738:8399-8418 Msa1463890:intergenic 45.0%
CTGTTGTGCTGGGATTGAGA+GGG + tig0043738:5353-5372 Msa1463890:intergenic 50.0%
ACTGTTGTGCTGGGATTGAG+AGG + tig0043738:5354-5373 Msa1463890:intergenic 50.0%
TCTCAATCCCAGCACAACAG+TGG - tig0043738:5353-5372 Msa1463890:three_prime_UTR 50.0%
!! TTTCAGGTTAGCTTGCACGG+AGG - tig0043738:6554-6573 Msa1463890:CDS 50.0%
!! TTCAGGTTAGCTTGCACGGA+GGG - tig0043738:6555-6574 Msa1463890:CDS 50.0%
ACGGAGGGCAAGTTCTTTCA+TGG - tig0043738:6570-6589 Msa1463890:intron 50.0%
ACTCCTCCAAAACCAGTACG+AGG - tig0043738:6874-6893 Msa1463890:intron 50.0%
ATTGGGATTCCTCCTCGTAC+TGG + tig0043738:6889-6908 Msa1463890:intergenic 50.0%
CGTGGAACACTAGAGCAACA+TGG - tig0043738:7028-7047 Msa1463890:CDS 50.0%
TAAAGCGTGTCGCACCTATG+TGG + tig0043738:7175-7194 Msa1463890:intergenic 50.0%
! CTGGGGTATCTAGCTAACTG+GGG + tig0043738:7384-7403 Msa1463890:intergenic 50.0%
! TCAGCTTCGAGTTTCGCCTA+AGG - tig0043738:7489-7508 Msa1463890:intron 50.0%
! CAGCTTCGAGTTTCGCCTAA+GGG - tig0043738:7490-7509 Msa1463890:intron 50.0%
GTTTCGCCTAAGGGTCTGTT+TGG - tig0043738:7499-7518 Msa1463890:intron 50.0%
TCTCGCATCCGGAATGTCAA+TGG - tig0043738:7548-7567 Msa1463890:intron 50.0%
GACAGTGAAGTGAGGGTAGA+AGG - tig0043738:7803-7822 Msa1463890:five_prime_UTR 50.0%
TGAAGTGAGGGTAGAAGGGT+TGG - tig0043738:7808-7827 Msa1463890:five_prime_UTR 50.0%
GTTGGAGACTCTTGACTACC+TGG - tig0043738:7826-7845 Msa1463890:five_prime_UTR 50.0%
! GTTCTGTGAAGCGTTCCTTC+TGG + tig0043738:7862-7881 Msa1463890:intergenic 50.0%
GTACAAGCAAATGCTCTGCG+TGG - tig0043738:8318-8337 Msa1463890:five_prime_UTR 50.0%
AAGCAAATGCTCTGCGTGGA+TGG - tig0043738:8322-8341 Msa1463890:five_prime_UTR 50.0%
AAACCGGGAGAAGAATGGAC+CGG - tig0043738:8373-8392 Msa1463890:five_prime_UTR 50.0%
CCTGCTACCACTGTTGTGCT+GGG + tig0043738:5363-5382 Msa1463890:intergenic 55.0%
CGTTCGAGGAGCTTCAGCAA+CGG - tig0043738:6442-6461 Msa1463890:CDS 55.0%
!!! CCTCCTCGTACTGGTTTTGG+AGG + tig0043738:6880-6899 Msa1463890:intergenic 55.0%
CCTCCAAAACCAGTACGAGG+AGG - tig0043738:6877-6896 Msa1463890:intron 55.0%
AAATCCTCCACCACTGCCCA+CGG - tig0043738:7084-7103 Msa1463890:intron 55.0%
TTTGAATCCGTGGGCAGTGG+TGG + tig0043738:7094-7113 Msa1463890:intergenic 55.0%
CCATTTGAATCCGTGGGCAG+TGG + tig0043738:7097-7116 Msa1463890:intergenic 55.0%
CCACTGCCCACGGATTCAAA+TGG - tig0043738:7094-7113 Msa1463890:intron 55.0%
CTGCTGCCAAACAGACCCTT+AGG + tig0043738:7508-7527 Msa1463890:intergenic 55.0%
AGGGTCTGTTTGGCAGCAGA+TGG - tig0043738:7509-7528 Msa1463890:intron 55.0%
AACAGAAAGCTCCAAGCGGC+CGG + tig0043738:8395-8414 Msa1463890:intergenic 55.0%
CCCAGCACAACAGTGGTAGC+AGG - tig0043738:5360-5379 Msa1463890:three_prime_UTR 60.0%
GCCTGCTACCACTGTTGTGC+TGG + tig0043738:5364-5383 Msa1463890:intergenic 60.0%
TGCGTGGATGGTGCAGCAGT+TGG - tig0043738:8334-8353 Msa1463890:five_prime_UTR 60.0%
AGAAGAATGGACCGGCCGCT+TGG - tig0043738:8381-8400 Msa1463890:five_prime_UTR 60.0%
GAATCCGTGGGCAGTGGTGG+AGG + tig0043738:7091-7110 Msa1463890:intergenic 65.0%
CGGCCGGTCCATTCTTCTCC+CGG + tig0043738:8379-8398 Msa1463890:intergenic 65.0%
Chromosome Type Strat End Strand Name
tig0043738 gene 5283 8784 5283 ID=Msa1463890;Name=Msa1463890
tig0043738 mRNA 5283 8784 5283 ID=Msa1463890-mRNA-1;Parent=Msa1463890;Name=Msa1463890-mRNA-1;_AED=0.14;_eAED=0.14;_QI=1067|1|1|1|1|1|8|355|304
tig0043738 exon 5283 5807 5283 ID=Msa1463890-mRNA-1:exon:24231;Parent=Msa1463890-mRNA-1
tig0043738 exon 5949 6048 5949 ID=Msa1463890-mRNA-1:exon:24230;Parent=Msa1463890-mRNA-1
tig0043738 exon 6157 6259 6157 ID=Msa1463890-mRNA-1:exon:24229;Parent=Msa1463890-mRNA-1
tig0043738 exon 6440 6574 6440 ID=Msa1463890-mRNA-1:exon:24228;Parent=Msa1463890-mRNA-1
tig0043738 exon 6888 7048 6888 ID=Msa1463890-mRNA-1:exon:24227;Parent=Msa1463890-mRNA-1
tig0043738 exon 7146 7202 7146 ID=Msa1463890-mRNA-1:exon:24226;Parent=Msa1463890-mRNA-1
tig0043738 exon 7433 7507 7433 ID=Msa1463890-mRNA-1:exon:24225;Parent=Msa1463890-mRNA-1
tig0043738 exon 7604 8784 7604 ID=Msa1463890-mRNA-1:exon:24224;Parent=Msa1463890-mRNA-1
tig0043738 five_prime_UTR 7718 8784 7718 ID=Msa1463890-mRNA-1:five_prime_utr;Parent=Msa1463890-mRNA-1
tig0043738 CDS 7604 7717 7604 ID=Msa1463890-mRNA-1:cds;Parent=Msa1463890-mRNA-1
tig0043738 CDS 7433 7507 7433 ID=Msa1463890-mRNA-1:cds;Parent=Msa1463890-mRNA-1
tig0043738 CDS 7146 7202 7146 ID=Msa1463890-mRNA-1:cds;Parent=Msa1463890-mRNA-1
tig0043738 CDS 6888 7048 6888 ID=Msa1463890-mRNA-1:cds;Parent=Msa1463890-mRNA-1
tig0043738 CDS 6440 6574 6440 ID=Msa1463890-mRNA-1:cds;Parent=Msa1463890-mRNA-1
tig0043738 CDS 6157 6259 6157 ID=Msa1463890-mRNA-1:cds;Parent=Msa1463890-mRNA-1
tig0043738 CDS 5949 6048 5949 ID=Msa1463890-mRNA-1:cds;Parent=Msa1463890-mRNA-1
tig0043738 CDS 5638 5807 5638 ID=Msa1463890-mRNA-1:cds;Parent=Msa1463890-mRNA-1
tig0043738 three_prime_UTR 5283 5637 5283 ID=Msa1463890-mRNA-1:three_prime_utr;Parent=Msa1463890-mRNA-1
Gene Sequence

>Msa1463890

ATGAATCATTCTGGAGCTGAAAGTGATCATAAAATAACATCAGTTGAAGTTATCAAGGACAAAAATGGAATAGAACAAGTTGTTCTTCGAAACGTTCGAGGAGCTTCAGCAACGGTTAGCTTGCACGGAGGGCAAGTTCTTTCATGGAAAACAGAACGCGGTGAAGAGTTATTGTTCACTAGTACCAAGGCCGTCTATACTCCTCCAAAACCAGTACGAGGAGGAATCCCAATCTGTTTTCCACAGTTTGGAAACCGTGGAACACTAGAGCAACATGGATTTGCAAGGAATAAGATATGGGTTATCGATCAAAATCCTCCACCACTGCCCACGGATTCAAATGGAAAAGCTTGCATCGACTTGCTGCTCAAACCATCTGAAGACGATATGAAGATATGGCCACATAGCTTCGAGTTTCGCCTAAGGGTCTGTTTGGCAGCAGATGGCCGTCTGAATATGATATCTCGCATCCGGAATGTCAATGGCAAGCCTTTCAGTTTCTCCTTTGCATTTCATACATATTTCTCCATATCAGATATCAGTGAAGTGAGGGTAGAAGGGTTGGAGACTCTTGACTACCTGGATAACCTATACCAGAAGGAACGCTTCACAGAACAAGGAGATGCTTTAACATTTGAATCTGAGGTGGATCGAGTTTATCTCGATTCTAGCAGTATGGTAGCCGTTCTAGATCATGAGAAGAAACGAACATTTGTGATACGAAAGGAAGGTCTTCCAGATGTTGTTGTTTGGAATCCCTGGGAGAAAAAATCAAAGTCAATAGTGGATTTTGGGGATGAAGAGTACAAGCAAATGCTCTGCGTGGATGGTGCAGCAGTTGGAAATCCGATAACCTTAAAACCGGGAGAAGAATGGACCGGCCGCTTGGAGCTTTCTGTTGTACCTTCTACTTGA

Protein sequence

>Msa1463890

MNHSGAESDHKITSVEVIKDKNGIEQVVLRNVRGASATVSLHGGQVLSWKTERGEELLFTSTKAVYTPPKPVRGGIPICFPQFGNRGTLEQHGFARNKIWVIDQNPPPLPTDSNGKACIDLLLKPSEDDMKIWPHSFEFRLRVCLAADGRLNMISRIRNVNGKPFSFSFAFHTYFSISDISEVRVEGLETLDYLDNLYQKERFTEQGDALTFESEVDRVYLDSSSMVAVLDHEKKRTFVIRKEGLPDVVVWNPWEKKSKSIVDFGDEEYKQMLCVDGAAVGNPITLKPGEEWTGRLELSVVPST*